Origin IGS: taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tagttttccatttgattttgacttttaagtcaatataacaactgatacaaataaatatggcgtcatatcccagagggtatgacgccatatttgttttcaatagaattaaaccaataagatgcttaaagaaagaattgattataattcaatatgcttataatcaaaaagaagtgaagtttattcgtttagttcttacaccaaattcacgttatgcaatgaacgaaaagaaggtaataaaggtgtaaatatttttcgtaaagataattattacttaactatctaaccatcaacgcattataaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcagtttttaacagaattatctttacaaaattaaacagaaaatctctcactgtttcagtaggaagttttctaaagaatagttgagagattttctgtttaacctattttcttataccgaactaacgtatgttatagcttta Mask Tandem Repeat Region ================================================ taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Find is-nt database================================================ Query_seq: PI2178:PI0001|PI2178:PI0001:1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor:->->:1..539 539 taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI2178:PI0001|PI2178:PI0001:1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor:->->:1..539 539 taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI2178:PI0001|PI2178:PI0001:1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor:->->:1..539 539 taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Predict ORF larger than 30AA ================================================ Protein_Len: 30 Strand: + Start: 144 End: 233 ............................................................................................................................................... M R F G V A K A A L L R C K T Y A F T V Q N S R F W N A K Q .................................................................................................................................................................................................................................................................................................................. Protein_Len: 38 Strand: + Start: 137 End: 250 ........................................................................................................................................ M I T A L W R C E S G S F A M Q N L R F Y R A K Q P L L E R K T I G F I M R ................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 52 End: 261 ................................................... M S Q L F F R K L P T E T V R D F L F N F V K I I L L K T D N C A L A L R K R L F C D A K P T L L P C K T A A F G T Q N ...................................................................................................................................................................................................................................................................................... Protein_Len: 48 Strand: + Start: 395 End: 538 .......................................................................................................................................................................................................................................................................................................................................................................................................... M I I N S F F K H L I G L I L L K T N M A S Y P L G Y D A I F I C I S C Y I D L K V K I K W K T . Protein_Len: 60 Strand: - Start: 298 End: 498 ......................................................................................................................................................................................................................................................................................................... N M A Y R S N P T L V L R I F K V E K Q N Y A Y Q I I I L E K K L C R I P K I R N F V F I A D Y G R P Y S A M N I Q I M ......................................... Protein_Len: 58 Strand: - Start: 60 End: 233 ........................................................... S N K L F S G V S V T L S K R N L K T F I I R N F V S L Q A K A N R F R S K Q S A F G V S K G H L V A A K P V C F M .................................................................................................................................................................................................................................................................................................................. taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 85 Start: 217 End: 246 ........................................................................................................................................................................................................................TTTGGAACGCAAAACAATAGGTTTTATAAT..................................................................................................................................................................................................................................................................................................... PromScan Matrix: RpoD-17 Strand: + Score: 82 Start: 373 End: 402 ....................................................................................................................................................................................................................................................................................................................................................................................TTTTTGATTATAAGCATATTGAATTATAAT......................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 78 HP_score: -9.0 Tail_Score: -3.53012 Start: 165 End: 215 Full_Region: ttttgcgttccaaaa gcggctgttttgcacggtaaaagc gta ggttttgcatcgcaaaagagccgc tttcgcaacgccaaa ....................................................................................................................................................................gcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgc.................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 85 HP_score: -9.0 Tail_Score: -4.07568 Start: 165 End: 215 Full_Region: TTTGGCGTTGCGAAA GCGGCTCTTTTGCGATGCAAAACC TAC GCTTTTACCGTGCAAAACAGCCGC TTTTGGAACGCAAAA ....................................................................................................................................................................GCGGCTCTTTTGCGATGCAAAACCTACGCTTTTACCGTGCAAAACAGCCGC.................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 50 HP_score: -3.4 Tail_Score: -3.54307 Start: 260 End: 280 Full_Region: ATGCGTTGATGGTTA GATAGTTA AGTAA TAATTATC TTTACGAAAAATATT ...................................................................................................................................................................................................................................................................GATAGTTAAGTAATAATTATC................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -20.5 Tail_Score: -4.19704 Start: 447 End: 488 Full_Region: aacaactgatacaaa taaatatggcgtcatatcc caga gggtatgacgccatatttg ttttcaatagaatta ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................taaatatggcgtcatatcccagagggtatgacgccatatttg................................................... TransTerm Strand: - Conf: 100 HP_score: -19.1 Tail_Score: -4.68908 Start: 451 End: 484 Full_Region: actgatacaaataaa tatggcgtcatatcc caga gggtatgacgccata tttgttttcaataga ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatggcgtcatatcccagagggtatgacgccata....................................................... Find igs database================================================ Query_seq: PI2178:PI0001|PI2178:PI0001:1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor:->->:1..539 539 taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Intra-Species Hit: Count: 59 Min: 1 Max: 539 Len: 539 Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 0.0 bit: 1068.0 Len: 539 Query Start:1 Query End:539 Subject Strand: POSITIVE Subject Start: 1 Subject End: 539 taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta taaagctataacatacgttagttcggtataagaaaataggttaaacagaaaatctctcaactattctttagaaaacttcctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatcttattggtttaattctattgaaaacaaatatggcgtcataccctctgggatatgacgccatatttatttgtatcagttgttatattgacttaaaagtcaaaatcaaatggaaaacta Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 1.0E-104 bit: 379.0 Len: 315 Query Start:111 Query End:425 Subject Strand: POSITIVE Subject Start: 50 Subject End: 364 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgattataagcatattgaattataatcaattctttctttaagcatctta.................................................................................................................. ..............................................................................................................ttttgtaaagataattccgttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacgctgatggttagatagttacgtaataggtaagcttgtgaaaaatatttacacttttattagcttctttttattcatggaatagcgtgaatttggtgtaagaacttgccgaagaaacttcacttctttctcattataagcatatcgaatcgtaatcaattctttctttaagtatctta.................................................................................................................. Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 9.0E-82 bit: 305.0 Len: 210 Query Start:111 Query End:320 Subject Strand: NEGATIVE Subject Start: 16 Subject End: 225 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgt........................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttgacgttgcgaaagcggctcttttacgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgtaatacgttgatgattagatagttaagcaatagatatatgtgcgaaaaatatttacacatttattactttcttttcgt........................................................................................................................................................................................................................... Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 1.0E-71 bit: 272.0 Len: 338 Query Start:79 Query End:416 Subject Strand: POSITIVE Subject Start: 134 Subject End: 473 ..............................................................................cctactgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaa--acgaataaacttcacttctttttgattataagcatattgaattataatcaattctttcttta........................................................................................................................... ..............................................................................cctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttcttta........................................................................................................................... Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 1.0E-68 bit: 262.0 Len: 188 Query Start:82 Query End:269 Subject Strand: POSITIVE Subject Start: 139 Subject End: 326 .................................................................................actgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaag.............................................................................................................................................................................................................................................................................. .................................................................................actgaaatagtgagagttttttggtttaatcttgtaaagataattccgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcattgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgatggttaggtggttaag.............................................................................................................................................................................................................................................................................. Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 7.0E-67 bit: 256.0 Len: 165 Query Start:90 Query End:254 Subject Strand: POSITIVE Subject Start: 458 Subject End: 622 .........................................................................................agtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. .........................................................................................agtgagagaatttcggcttaactttgtaaagataattctgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccatgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 7.0E-64 bit: 246.0 Len: 144 Query Start:111 Query End:254 Subject Strand: NEGATIVE Subject Start: 139 Subject End: 282 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgtaaaacaataggttttgtaaggcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 7.0E-64 bit: 246.0 Len: 144 Query Start:111 Query End:254 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 227 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcattgcgaaagcggctcttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgcaatgcattgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 3.0E-63 bit: 244.0 Len: 223 Query Start:84 Query End:306 Subject Strand: POSITIVE Subject Start: 172 Subject End: 394 ...................................................................................tgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttat......................................................................................................................................................................................................................................... ...................................................................................tgaaatagtgggagtttttccgcttaactttgtaaagataattccgttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgtttttggaacgcaaaacaataggttttataactctctgatgattagagagttaagcaacagttgaacttgcgaaaaatatttacacctttat......................................................................................................................................................................................................................................... Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 7.0E-61 bit: 236.0 Len: 143 Query Start:112 Query End:254 Subject Strand: POSITIVE Subject Start: 310 Subject End: 452 ...............................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ...............................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1408_PI1409|glucose-1-phosphate thymidylyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1329822,1330988]|1167 HSP 1 e-value: 1.0E-59 bit: 232.0 Len: 241 Query Start:84 Query End:324 Subject Strand: NEGATIVE Subject Start: 614 Subject End: 854 ...................................................................................tgaaacagtgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcat....................................................................................................................................................................................................................... ...................................................................................tgaaacagtgagagttatttcatttaattttgtaaaaataattctgttaaaaagtgataactgtactttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatacaaaacaataggttttgtaatgagctgatagatagtgaattatgcaacagttatgtttgtgaaaaatatttacacgcatattatcttcttttcgttcat....................................................................................................................................................................................................................... Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 6.0E-58 bit: 226.0 Len: 150 Query Start:92 Query End:241 Subject Strand: POSITIVE Subject Start: 129 Subject End: 278 ...........................................................................................tgagagattttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... ...........................................................................................tgagagtttttaggtttaactttgtaaagataattccgttaaaaagtgataaccgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 6.0E-58 bit: 226.0 Len: 270 Query Start:112 Query End:381 Subject Strand: POSITIVE Subject Start: 60 Subject End: 329 ...............................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaaacgaataaacttcacttctttttgatt.............................................................................................................................................................. ...............................................................................................................tttgtaaagataattctgttaaaaagtgacaactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttagaatgcaaaacaataggttttgtaacacattgataattaaagagttaaacaatagatactcttatgaaaaatatttacacgtctatcatctttttttcggttataaaacaacgtgaattcggtgtaagaattggacgaaaagacttcacttctttctgatt.............................................................................................................................................................. Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 2.0E-55 bit: 218.0 Len: 150 Query Start:111 Query End:260 Subject Strand: POSITIVE Subject Start: 185 Subject End: 334 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttag....................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgctttggcgttgcgaaagcggctcttttgtgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcgaaacaataggttttgtaaggcgttgatgattag....................................................................................................................................................................................................................................................................................... Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 4.0E-53 bit: 210.0 Len: 134 Query Start:108 Query End:241 Subject Strand: NEGATIVE Subject Start: 305 Subject End: 438 ...........................................................................................................taattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... ...........................................................................................................taattttgtaaagataattctcttaaaaagtgataactgcgctttgacgttgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 6.0E-52 bit: 206.0 Len: 136 Query Start:111 Query End:246 Subject Strand: POSITIVE Subject Start: 146 Subject End: 281 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................... Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386 HSP 1 e-value: 2.0E-51 bit: 204.0 Len: 135 Query Start:112 Query End:246 Subject Strand: POSITIVE Subject Start: 215 Subject End: 349 ...............................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... ...............................................................................................................tttgtaaagattattctcttaaaaagtgataactgcgttttgacgatgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................... Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 2.0E-51 bit: 204.0 Len: 143 Query Start:112 Query End:254 Subject Strand: NEGATIVE Subject Start: 374 Subject End: 516 ...............................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ...............................................................................................................tttgtaaagataattctgatgaaaaatgataatttcgatttggcattgcgaaagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 2.0E-51 bit: 204.0 Len: 131 Query Start:111 Query End:241 Subject Strand: NEGATIVE Subject Start: 98 Subject End: 228 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgttttgacattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 2.0E-51 bit: 204.0 Len: 135 Query Start:111 Query End:245 Subject Strand: NEGATIVE Subject Start: 107 Subject End: 241 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataa...................................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaaaataattccgttaaaaagcgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataa...................................................................................................................................................................................................................................................................................................... Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 2.0E-51 bit: 204.0 Len: 131 Query Start:111 Query End:241 Subject Strand: POSITIVE Subject Start: 114 Subject End: 244 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagattattctgttaaaaagcgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttagcgtgcaaaacagccgcttttggaatgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 1.0E-49 bit: 198.0 Len: 144 Query Start:111 Query End:254 Subject Strand: POSITIVE Subject Start: 113 Subject End: 256 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataatttctttgaaaaatggtaatttcgatttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 2.0E-48 bit: 194.0 Len: 130 Query Start:112 Query End:241 Subject Strand: NEGATIVE Subject Start: 255 Subject End: 384 ...............................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... ...............................................................................................................tttgtaaagataattctcttaaaaagtgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccacttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409 HSP 1 e-value: 9.0E-48 bit: 192.0 Len: 125 Query Start:130 Query End:254 Subject Strand: POSITIVE Subject Start: 120 Subject End: 244 .................................................................................................................................ttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. .................................................................................................................................ttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaatgcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 1.0E-46 bit: 188.0 Len: 139 Query Start:110 Query End:248 Subject Strand: POSITIVE Subject Start: 140 Subject End: 278 .............................................................................................................attttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgc................................................................................................................................................................................................................................................................................................... .............................................................................................................attttgtaaagataattctcttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttataatgc................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 32 Query Start:286 Query End:317 Subject Strand: POSITIVE Subject Start: 316 Subject End: 347 .............................................................................................................................................................................................................................................................................................gaaaaatatttacacctttattaccttctttt.............................................................................................................................................................................................................................. .............................................................................................................................................................................................................................................................................................gaaaaatatttacacctttattgccttctttt.............................................................................................................................................................................................................................. Subject: pint_PI1271_PI1272|transcriptional regulator, AraC/XylS family:possible transcriptional regulator|POSITIVE:POSITIVE|[1191345,1191841]|497 HSP 1 e-value: 3.0E-44 bit: 180.0 Len: 119 Query Start:112 Query End:230 Subject Strand: POSITIVE Subject Start: 257 Subject End: 375 ...............................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaa..................................................................................................................................................................................................................................................................................................................... ...............................................................................................................tttgtaaatataattccgttaaaaagtgataactgcgctttaacgttgcgaaagcggttcttttgcgatgcaaaacctacgcttttaccgtacaaaacagccgcttttggaacgcaaaa..................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-6 bit: 54.0 Len: 39 Query Start:286 Query End:324 Subject Strand: POSITIVE Subject Start: 431 Subject End: 469 .............................................................................................................................................................................................................................................................................................gaaaaatatttacacctttattaccttcttttcgttcat....................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................gaaaaatatttacagcttgattatcttcttttcgttcat....................................................................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 1.0E-43 bit: 178.0 Len: 142 Query Start:111 Query End:252 Subject Strand: POSITIVE Subject Start: 201 Subject End: 341 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttg............................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggct-gtttgcgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaatgcgttg............................................................................................................................................................................................................................................................................................... Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 5.0E-40 bit: 167.0 Len: 144 Query Start:111 Query End:254 Subject Strand: POSITIVE Subject Start: 10 Subject End: 153 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataattccgaagaaaaatgataatttcgatttgacgttgcgaaagtggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcaaaacaataggttttgtaatgcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 2.0E-39 bit: 165.0 Len: 158 Query Start:110 Query End:267 Subject Strand: POSITIVE Subject Start: 154 Subject End: 311 .............................................................................................................attttgtaaagataattctgttaa-aaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagtta................................................................................................................................................................................................................................................................................ .............................................................................................................attttgtaaagataattc-gttaagaaaacgataatttcgatttgacgttgcgaaagctgctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataatgcattggtgatgagatagtta................................................................................................................................................................................................................................................................................ Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 1.0E-37 bit: 159.0 Len: 144 Query Start:111 Query End:254 Subject Strand: POSITIVE Subject Start: 215 Subject End: 358 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataatttcgctgaaaaacgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttacaatacgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 3.0E-35 bit: 151.0 Len: 144 Query Start:111 Query End:254 Subject Strand: NEGATIVE Subject Start: 398 Subject End: 541 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataattacattgaaaattgataatttcgttttgacgttgcgaaagcggctgttttgcgaggtaaaacctacgcttttgccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaacacgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 3.0E-35 bit: 151.0 Len: 144 Query Start:111 Query End:254 Subject Strand: NEGATIVE Subject Start: 28 Subject End: 171 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataattctgatgaaaaacaataatttcgttttgacgttgcgaaagcggctcttttacaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgtaaagcattgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 1.0E-34 bit: 149.0 Len: 143 Query Start:112 Query End:254 Subject Strand: NEGATIVE Subject Start: 166 Subject End: 308 ...............................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ...............................................................................................................tttgtaaagataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttacaaagcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 7.0E-33 bit: 143.0 Len: 144 Query Start:110 Query End:253 Subject Strand: POSITIVE Subject Start: 190 Subject End: 333 .............................................................................................................attttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttga.............................................................................................................................................................................................................................................................................................. .............................................................................................................attttgtaaagataatttcgttaaaaagtgataactgcactttgacgttgcgaaagcggctgttttacgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttaggacgcaaaacaatagattttgtaatgcattga.............................................................................................................................................................................................................................................................................................. Subject: pint_PI0694_PI0695|Na+/dicarboxylate or sulfate symporter:xanthine/uracil permease family protein|POSITIVE:POSITIVE|[631238,631552]|315 HSP 1 e-value: 7.0E-33 bit: 143.0 Len: 152 Query Start:158 Query End:309 Subject Strand: POSITIVE Subject Start: 135 Subject End: 286 .............................................................................................................................................................tgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattac...................................................................................................................................................................................................................................... .............................................................................................................................................................tgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgcaaagtgttgatagtgagagagttaagtgaaagatactcttgcgaaaaatatttacacttttattac...................................................................................................................................................................................................................................... Subject: pint_PI0191_PI0192|O-methyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[181846,182270]|425 HSP 1 e-value: 7.0E-33 bit: 143.0 Len: 108 Query Start:147 Query End:254 Subject Strand: NEGATIVE Subject Start: 169 Subject End: 276 ..................................................................................................................................................cgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..................................................................................................................................................cgctttcgctttgcaatagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgtaacgcgctgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 2.0E-30 bit: 135.0 Len: 144 Query Start:111 Query End:254 Subject Strand: POSITIVE Subject Start: 79 Subject End: 222 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 7.0E-30 bit: 133.0 Len: 131 Query Start:111 Query End:241 Subject Strand: POSITIVE Subject Start: 91 Subject End: 221 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataatttctttaaaaagtaataatttcgatttgacattgcgaaaacggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggagtgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... Subject: pint_PI2056_PI2057|conserved hypothetical protein:conserved hypothetical protein; possible metal-dependent membrane protease|POSITIVE:POSITIVE|[2014489,2015078]|590 HSP 1 e-value: 3.0E-29 bit: 131.0 Len: 137 Query Start:110 Query End:246 Subject Strand: POSITIVE Subject Start: 340 Subject End: 476 .............................................................................................................attttgtaaagataattctgttaa-aaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... .............................................................................................................attttgtaaagataattc-gttaagaaaacaataatttcgatttgacgttgcgaaagcggctcttttgtaatgcaaaacttacgcttttaccatgcaaaacagccgcttttggaatgcgaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................... Subject: pint_PI1909_PI1910|DNA gyrase, B subunit:hypothetical protein|POSITIVE:POSITIVE|[1855331,1855917]|587 HSP 1 e-value: 1.0E-28 bit: 129.0 Len: 145 Query Start:110 Query End:254 Subject Strand: NEGATIVE Subject Start: 334 Subject End: 478 .............................................................................................................attttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. .............................................................................................................attttgtaaagataacattgttaaaaagtgataactgcgctttgacattgcgaaagcgtaggttttgcgatgcaaaagcgccacttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgcaatgcgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 4.0E-28 bit: 127.0 Len: 131 Query Start:111 Query End:241 Subject Strand: NEGATIVE Subject Start: 332 Subject End: 462 ..............................................................................................................ttttgtaaagataattctgttaa-aaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattc-gttaagaaaacgataatttcgatttgacgttgcgaaagcagctcttttgcaacgcaaaacctatgcttttaccgtgcaaaacagccgcttttaggatgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................... Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 4.0E-28 bit: 127.0 Len: 220 Query Start:101 Query End:320 Subject Strand: POSITIVE Subject Start: 177 Subject End: 396 ....................................................................................................ttctgtttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgt........................................................................................................................................................................................................................... ....................................................................................................ttctatttaaatatgtaaaaataattccgttaaaaagtaataactgcgctttgacattgcgaaagtggctgttttgcaacgcaaaacagccgcttttatcgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatacattgatgtatagatagttatgcaatagtttcccttgtgaaaaatatttacatctttgttgctttcttttcgt........................................................................................................................................................................................................................... Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479 HSP 1 e-value: 7.0E-24 bit: 113.0 Len: 133 Query Start:113 Query End:245 Subject Strand: POSITIVE Subject Start: 113 Subject End: 245 ................................................................................................................ttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataa...................................................................................................................................................................................................................................................................................................... ................................................................................................................ttgtaaaaataattccgttaaaaagtgataactgccttttgacattgcaaaagcagctgttttacgatgcaaaacaaccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttataa...................................................................................................................................................................................................................................................................................................... Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 4.0E-22 bit: 107.0 Len: 214 Query Start:111 Query End:324 Subject Strand: POSITIVE Subject Start: 144 Subject End: 357 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcat....................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattcgttgaaaaaatgataatttcgatttgacattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgcaaagtcttgatagtgagatagttatgcaatggttacgcttgtgaaaaatatttacacttttattatcttcttttcgttcat....................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-6 bit: 54.0 Len: 35 Query Start:162 Query End:196 Subject Strand: NEGATIVE Subject Start: 195 Subject End: 229 .................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................aaagcggctcttttgcaacgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406 HSP 1 e-value: 2.0E-21 bit: 105.0 Len: 157 Query Start:111 Query End:267 Subject Strand: NEGATIVE Subject Start: 165 Subject End: 321 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagtta................................................................................................................................................................................................................................................................................ ..............................................................................................................ttttgtaaagataattcccttaaaaaaggataactgcgctttggcattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaacacgttttataacacgctgatgtatagatagtta................................................................................................................................................................................................................................................................................ HSP 2 e-value: 5.0E-6 bit: 54.0 Len: 35 Query Start:162 Query End:196 Subject Strand: POSITIVE Subject Start: 236 Subject End: 270 .................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................aaagcggctcttttgcaacgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 6.0E-21 bit: 103.0 Len: 104 Query Start:150 Query End:253 Subject Strand: NEGATIVE Subject Start: 45 Subject End: 148 .....................................................................................................................................................tttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttga.............................................................................................................................................................................................................................................................................................. .....................................................................................................................................................tttggcgttgcgaaagcggctgttttgcagcgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaaagcgttga.............................................................................................................................................................................................................................................................................................. Subject: pint_PI1588_PI1589|DNA polymerase III, epsilon chain:conserved hypothetical protein|POSITIVE:POSITIVE|[1516991,1517497]|507 HSP 1 e-value: 2.0E-20 bit: 101.0 Len: 123 Query Start:111 Query End:233 Subject Strand: POSITIVE Subject Start: 226 Subject End: 348 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaa.................................................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaaaataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcacgccaaaagcggctcttttaccttgcaaaacagccgcttttggaacgcaaaacaa.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 136 Query Start:111 Query End:246 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 362 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... ..............................................................................................................ttttgtaaagataattcattgaaaaac-gataatttcgatttggcattgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacacttttggaatgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... Subject: pint_PI1324_PI1325|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1243086,1243554]|469 HSP 1 e-value: 6.0E-18 bit: 93.7 Len: 215 Query Start:106 Query End:320 Subject Strand: NEGATIVE Subject Start: 183 Subject End: 397 .........................................................................................................tttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgt........................................................................................................................................................................................................................... .........................................................................................................tttaatattgtaaaaataattctgttaaaaagtgataactgcactttggcattgtaaaagcggctgttttgcatcgcaaaacagccgcttttggctggtaaaagagccgcttttacaatgtaaaacaataggttttgtaattcgttgataattagtttgttaggcaacagttatgtttgtgaaaaatatttacagcgctatctccttcttttcgt........................................................................................................................................................................................................................... Subject: pint_PI1958_PI1959|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1917430,1917847]|418 HSP 1 e-value: 2.0E-17 bit: 91.7 Len: 138 Query Start:109 Query End:246 Subject Strand: POSITIVE Subject Start: 180 Subject End: 317 ............................................................................................................aattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... ............................................................................................................aattttgtaaagataattctgataaaaaacagcaatttcggtttgacattgcaaaagcggctgttttgcattgcaaaacagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... Subject: pint_PI1937_PI1938|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1891147,1891993]|847 HSP 1 e-value: 2.0E-17 bit: 91.7 Len: 122 Query Start:116 Query End:237 Subject Strand: POSITIVE Subject Start: 507 Subject End: 628 ...................................................................................................................taaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaatagg.............................................................................................................................................................................................................................................................................................................. ...................................................................................................................taaagataattctgttaaaaagcgataactgcgctttggcgttgcgaaagcgtaacttttgcacgccaaaagagccgcttttaccttgcaaaacctacgcttttagaacgtaaaacaatagg.............................................................................................................................................................................................................................................................................................................. Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 2.0E-17 bit: 91.7 Len: 114 Query Start:133 Query End:246 Subject Strand: POSITIVE Subject Start: 763 Subject End: 876 ....................................................................................................................................aaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... ....................................................................................................................................aaaaatgataatttcgatttggcgttgcgaaagcgtaggttttgcaacgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-6 bit: 54.0 Len: 35 Query Start:162 Query End:196 Subject Strand: NEGATIVE Subject Start: 792 Subject End: 826 .................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1981_PI1982|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1938199,1938578]|380 HSP 1 e-value: 9.0E-17 bit: 89.7 Len: 141 Query Start:106 Query End:246 Subject Strand: POSITIVE Subject Start: 139 Subject End: 279 .........................................................................................................tttaattttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... .........................................................................................................tttagttttgtaaagataattctgataaaaaacagcaatttcggtttgacattgcgaaagcggctgttttgcatttcaaaacagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................... Subject: pint_PI1441_PI1442|hypothetical protein:radical-activating enzyme (pyruvate-formate lyase-activating enzyme)|POSITIVE:POSITIVE|[1363734,1364088]|355 HSP 1 e-value: 9.0E-17 bit: 89.7 Len: 105 Query Start:150 Query End:254 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 177 .....................................................................................................................................................tttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. .....................................................................................................................................................tttgacgttgcgaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttgtaaagcgttgat............................................................................................................................................................................................................................................................................................. HSP 2 e-value: 5.0E-6 bit: 54.0 Len: 35 Query Start:162 Query End:196 Subject Strand: POSITIVE Subject Start: 131 Subject End: 165 .................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1688_PI1689|possible GTPase:conserved hypothetical protein|POSITIVE:POSITIVE|[1603964,1604449]|486 HSP 1 e-value: 4.0E-16 bit: 87.7 Len: 136 Query Start:110 Query End:245 Subject Strand: NEGATIVE Subject Start: 170 Subject End: 305 .............................................................................................................attttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataa...................................................................................................................................................................................................................................................................................................... .............................................................................................................attttgtaaagataattcggagggaaaatgataatttcgatttgacgttgcgaaagcgtatgttttgcgatgcaaaagagccgcttttaccgtgcaaaacctacgcttttacaatgcaaaacaataggttttataa...................................................................................................................................................................................................................................................................................................... Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415 HSP 1 e-value: 4.0E-16 bit: 87.7 Len: 144 Query Start:111 Query End:254 Subject Strand: NEGATIVE Subject Start: 166 Subject End: 309 ..............................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ..............................................................................................................ttttgtaaagataattttattaaaaagtggcaattgcgttttgacattgcaaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcgaaacaataggttttacaatgccttgat............................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 36 Query Start:162 Query End:197 Subject Strand: POSITIVE Subject Start: 224 Subject End: 259 .................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt...................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt...................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1915_PI1916|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1859967,1860350]|384 HSP 1 e-value: 1.0E-15 bit: 85.7 Len: 138 Query Start:110 Query End:247 Subject Strand: POSITIVE Subject Start: 113 Subject End: 250 .............................................................................................................attttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacc-tacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatg.................................................................................................................................................................................................................................................................................................... .............................................................................................................attttgtaaaaataattctgacgaaaaacgataatttcgatttggcattgcgaaagcggctgttttgcacggtaaaagcgtatg-ttttacgttgcaaaacagccgcttttggaatgcaaaacaataggttttataatg.................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-12 bit: 73.8 Len: 57 Query Start:162 Query End:218 Subject Strand: NEGATIVE Subject Start: 165 Subject End: 221 .................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttt................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................................aaagcggctgttttgcaacgtaaaacatacgcttttaccgtgcaaaacagccgcttt................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 6.0E-15 bit: 83.8 Len: 122 Query Start:133 Query End:254 Subject Strand: NEGATIVE Subject Start: 94 Subject End: 215 ....................................................................................................................................aaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. ....................................................................................................................................aaaaatgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacagccgcttttgccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgcaatgtgttgat............................................................................................................................................................................................................................................................................................. Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 3.0E-7 bit: 58.0 Len: 105 Query Start:150 Query End:254 Subject Strand: POSITIVE Subject Start: 180 Subject End: 284 .....................................................................................................................................................tttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................................. .....................................................................................................................................................tttggcattgcgaaagcggctgttttgcatcgcaaaacagccgctttgaccgtgtaaaacctacgcttttacaatgcaaaacaataggttttgcattgcgttgat............................................................................................................................................................................................................................................................................................. Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAAGCUAUAACAUACGUUAGUUCGGUAUAAGAAAAUAGGUUAAACAGAAAAUCUCUCAACUAUUCUUUAGAAAACUUCCUACUGAAACAGUGAGAGAUUUUCUGUUUAAUUUUGUAAAGAUAAUUCUGUUAAAAACUGAUAACUGCGCUUUGGCGUUGCGAAAGCGGCUCUUUUGCGAUGCAAAACCUACGCUUUUACCGUGCAAAACAGCCGCUUUUGGAACGCAAAACAAUAGGUUUUAUAAUGCGUUGAUGGUUAGAUAGUUAAGUAAUAAUUAUCUUUACGAAAAAUAUUUACACCUUUAUUACCUUCUUUUCGUUCAUUGCAUAACGUGAAUUUGGUGUAAGAACUAAACGAAUAAACUUCACUUCUUUUUGAUUAUAAGCAUAUUGAAUUAUAAUCAAUUCUUUCUUUAAGCAUCUUAUUGGUUUAAUUCUAUUGAAAACAAAUAUGGCGUCAUACCCUCUGGGAUAUGACGCCAUAUUUAUUUGUAUCAGUUGUUAUAUUGACUUAAAAGUCAAAAUCAAAUGGAAAACUA ..((((((.....(((((((...((((....(((((.((((((((((((((((((((((....(((..(((........)))..)))....)))))))))))))))))).(((((((((((((((..(((((..(((((.(((((((((....(((((.(((((((((((.(((((((....((((.......))))....))))))).))))))))))).))))).((((.....))))......))))....)))))..)))))...))))))))))))))))))))..................))))..)))))....))))..))))))).....((((((((((......(((.....)))........((((((((((..........))))))))))....)))))...)))))....))))))..(((((((((....((((((((((((((((((...))).)))))))))))))))...................((((((....))))))..)).)))))))..... (-158.20) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAGUUUUCCAUUUGAUUUUGACUUUUAAGUCAAUAUAACAACUGAUACAAAUAAAUAUGGCGUCAUAUCCCAGAGGGUAUGACGCCAUAUUUGUUUUCAAUAGAAUUAAACCAAUAAGAUGCUUAAAGAAAGAAUUGAUUAUAAUUCAAUAUGCUUAUAAUCAAAAAGAAGUGAAGUUUAUUCGUUUAGUUCUUACACCAAAUUCACGUUAUGCAAUGAACGAAAAGAAGGUAAUAAAGGUGUAAAUAUUUUUCGUAAAGAUAAUUAUUACUUAACUAUCUAACCAUCAACGCAUUAUAAAACCUAUUGUUUUGCGUUCCAAAAGCGGCUGUUUUGCACGGUAAAAGCGUAGGUUUUGCAUCGCAAAAGAGCCGCUUUCGCAACGCCAAAGCGCAGUUAUCAGUUUUUAACAGAAUUAUCUUUACAAAAUUAAACAGAAAAUCUCUCACUGUUUCAGUAGGAAGUUUUCUAAAGAAUAGUUGAGAGAUUUUCUGUUUAACCUAUUUUCUUAUACCGAACUAACGUAUGUUAUAGCUUUA ..((((.....(((...((((((....)))))).(((((...(((...((((((((((((((((((((((....)))))))))))))))))))))))))..((((((((((.(((((...((((..........((((((((((..........)))))))))).........))))))))).))))))))))..............))))).))).))))..((((...((((((..(((((((.........((((((((((((..........................................((((((((((.(.(((((((((.((((((...((((((.(...).))))))...)))))).))))))))).).)))).))))))...((((........))))..))))))))))))....(((((((((((((((((((((((((...(((((....)))))..)))))).))))))))))))))))))).........)))))))..((....)).))))))..)))). (-162.01) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 982 200 151 219 170 pint:PI2003|5end_hypothetical_protein_1960823..1961053_POSITIVE 982 200 151 58 9 pint:PI2002|5end_hypothetical_protein_1960662..1960892_POSITIVE 938 190 141 179 130 pint:PI0771|5end_conserved_hypothetical_protein_706524..706754_POSITIVE 933 210 161 56 7 pint:PI1129|5end_hypothetical_protein_1055377..1055607_POSITIVE 927 220 171 50 1 pint:PI0061|5end_hypothetical_protein_60500..60730_POSITIVE 926 230 181 88 39 pint:PI2153|5end_hypothetical_protein_2099392..2099622_POSITIVE 926 230 181 60 11 pint:PI0004|5end_hypothetical_protein_6199..6429_POSITIVE 908 200 151 58 9 pint:PI1346|5end_hypothetical_protein_1260814..1261044_POSITIVE 907 200 151 58 9 pint:PI1694|5end_hypothetical_protein_1609717..1609947_POSITIVE 905 240 191 55 6 pint:PI1905|5end_hypothetical_protein_1847628..1847858_POSITIVE 897 200 151 58 9 pint:PI1601|5end_hypothetical_protein_1530282..1530512_POSITIVE 890 208 161 54 7 pint:PI2144|5end_hypothetical_protein_2091954..2092184_POSITIVE 888 200 151 58 9 pint:PI1934|5end_hypothetical_protein_1882363..1882593_POSITIVE 888 200 151 66 17 pint:PI1168|5end_hypothetical_protein_1089696..1089926_POSITIVE 888 200 151 58 9 pint:PI1167|5end_hypothetical_protein_1089688..1089918_POSITIVE 886 200 151 58 9 pint:PI1829|5end_hypothetical_protein_1769255..1769485_POSITIVE 878 170 121 154 105 pint:PI2111|5end_conserved_hypothetical_protein_2062771..2063001_POSITIVE 874 220 172 204 156 pint:PI0788|5end_3-methyladenine_DNA_glycosylase_(DNA-3-methyladenine_glycosylase_I)_726152..726382_POSITIVE 872 220 171 105 56 pint:PI1604|5end_hypothetical_protein_1534017..1534247_POSITIVE 854 230 181 71 22 pint:PI1528|5end_hypothetical_protein_1449685..1449915_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 962 190 141 90 41 pint:PI0759|3end_hypothetical_protein_693998..694148_POSITIVE 938 200 151 140 91 pint:PI1814|3end_hypothetical_protein_1753233..1753383_POSITIVE 933 210 161 51 2 pint:PI0996|3end_hypothetical_protein_920660..920810_POSITIVE 933 210 161 150 101 pint:PI0061|3end_hypothetical_protein_60690..60840_POSITIVE 926 230 181 130 81 pint:PI1141|3end_hypothetical_protein_1069713..1069863_POSITIVE 926 200 151 140 91 pint:PI0689|3end_hypothetical_protein_625877..626027_POSITIVE 905 240 191 53 4 pint:PI0688|3end_hypothetical_protein_625750..625900_POSITIVE 897 200 151 150 101 pint:PI1601|3end_hypothetical_protein_1530454..1530604_POSITIVE 888 200 151 140 91 pint:PI1340|3end_hypothetical_protein_1256872..1257022_POSITIVE 876 200 151 144 95 pint:PI1922|3end_hypothetical_protein_1865454..1865604_POSITIVE 871 200 154 114 68 pint:PI1356|3end_hypothetical_protein_1273340..1273490_POSITIVE 852 210 161 150 101 pint:PI0670|3end_hypothetical_protein_611280..611430_POSITIVE 850 230 181 71 22 pint:PI0054|3end_hypothetical_protein_54829..54979_POSITIVE 829 240 191 53 4 pint:PI0186|3end_hypothetical_protein_178003..178153_POSITIVE 825 178 131 118 71 pint:PI0200|3end_hypothetical_protein_191735..191885_POSITIVE 808 240 194 47 1 pint:PI0669|3end_hypothetical_protein_611147..611297_POSITIVE 798 200 151 150 101 pint:PI1076|3end_hypothetical_protein_999065..999215_POSITIVE 787 190 141 130 81 pint:PI0004|3end_hypothetical_protein_6389..6539_POSITIVE 782 187 141 127 81 pint:PI0158|3end_hypothetical_protein_151298..151448_POSITIVE 763 197 151 151 105 pint:PI1528|3end_hypothetical_protein_1449878..1450028_POSITIVE