Origin IGS: gaccgaccgcaaagttacaggtgtcttcactggttctcatggcatcaaccccttcacaggcgagaaattgcctatctatatatcagaatacgtgctttcaggctatggcacaggtgcaattatggcagtgcctgcgcacgacagtcgcgactatgcgtttgccaaacacttcggtcttccaatccgtccgcttatcgaaggtgccgacgtttcggaagaaagcttcgacgcaaaagaaggtatcgtcatcaatagtcccgagaaaccagttgaaggaggcttctctttgaacggacttacggtgaaagaagccattgaagctaccaagaagtatgttacagaacaaggtttgggcaaagtgaaagtgaactatcgcctgcgcgatgccattttctcacgccagcgttattggggcgaacccttcccagtttactataaagaaggtatgccttatatggttcctgcagaatgtttgccgctcgaattgccttcaatcgacaagtttgaacctaccgaaacgggcgagcctccattgggacgtgccaaggcttgggcttgggacgaacagaacaagaagattgtagacaaggaattgatagacaacaagactgttttcccattggaattgaacacaatgccgggctttgcgggcagttctgcatactaccttcgctatatggacccacacaacaacaaggctttggtgggcaaggaagccaacgaatattggcagaatgtagacctttatgtaggcggaacagagcacgcaacaggacacttgatatacagccgcttctggaacaagttcctttacgactacggttacagttgcaaggaagagccatacgaaaagttggtgaaccaaggaatgatacaaggacgttccaacttcgtatatcgtatcaattcagacgaccattcaaaagctcccgtatttgtaagccacggactgaaaggcgaatacgaaacaacgccaatccacgtagatgtgaacattgttcatgccgatgtgctcgacgttgaggctttcaaggcgtggcgaccagaatacgaaaacgccgaattcatacttgaagacggtaagtatatctgcggttgggcagtggaaaagatgtcgaagtcgatgttcaacgttgtcaatcccgacgacattgtagcgcaatatggtgccgataccttgcgtttgtacgaaatgttccttggtcctgtcgaggcaagcaagccttgggacaccaacggtatcgacggttgtttccgcttcttgaagaagttctggaaactgtatcagcaggaactgaacgacaacgagccttcaaaggaatcgctgaagagcgtgcataagctcattaaaaagatttcaagcgacatagaacaattctcttataataccgccatatcagcttttatgatttgtgtgaacgagttgggacagcaaaagtgcaacaaccgcggcttattgcgcagcttgctcatattgatagcaccgtttgcgccacacattgctgaagaactatgggagtctatcggcgagaatggcagcgtctgcgatgcacaatggccaacttgggacgaagccaatctggctgaaaacgaagttcagctgaccatttcgttcaacggaaaggctcgcttccaaatgactttccctaccgatgccagcaaggaagacattgaaaaggcagccgtaaacgatgagagaagcttgaaatacacagaaggaaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat 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attcgtggctgtactttcagttcacgaatgtgcaatttttattttatttaaaaacgatatttacaatcttctttggtacaactatcacctttacgatagtctttccttctgtgtatttcaagcttctctcatcgtttacggctgccttttcaatgtcttccttgctggcatcggtagggaaagtcatttggaagcgagcctttccgttgaacgaaatggtcagctgaacttcgttttcagccagattggcttcgtcccaagttggccattgtgcatcgcagacgctgccattctcgccgatagactcccatagttcttcagcaatgtgtggcgcaaacggtgctatcaatatgagcaagctgcgcaataagccgcggttgttgcacttttgctgtcccaactcgttcacacaaatcataaaagctgatatggcggtattataagagaattgttctatgtcgcttgaaatctttttaatgagcttatgcacgctcttcagcgattcctttgaaggctcgttgtcgttcagttcctgctgatacagtttccagaacttcttcaagaagcggaaacaaccgtcgataccgttggtgtcccaaggcttgcttgcctcgacaggaccaaggaacatttcgtacaaacgcaaggtatcggcaccatattgcgctacaatgtcgtcgggattgacaacgttgaacatcgacttcgacatcttttccactgcccaaccgcagatatacttaccgtcttcaagtatgaattcggcgttttcgtattctggtcgccacgccttgaaagcctcaacgtcgagcacatcggcatgaacaatgttcacatctacgtggattggcgttgtttcgtattcgcctttcagtccgtggcttacaaatacgggagcttttgaatggtcgtctgaattgatacgatatacgaagttggaacgtccttgtatcattccttggttcaccaacttttcgtatggctcttccttgcaactgtaaccgtagtcgtaaaggaacttgttccagaagcggctgtatatcaagtgtcctgttgcgtgctctgttccgcctacataaaggtctacattctgccaatattcgttggcttccttgcccaccaaagccttgttgttgtgtgggtccatatagcgaaggtagtatgcagaactgcccgcaaagcccggcattgtgttcaattccaatgggaaaacagtcttgttgtctatcaattccttgtctacaatcttcttgttctgttcgtcccaagcccaagccttggcacgtcccaatggaggctcgcccgtttcggtaggttcaaacttgtcgattgaaggcaattcgagcggcaaacattctgcaggaaccatataaggcataccttctttatagtaaactgggaagggttcgccccaataacgctggcgtgagaaaatggcatcgcgcaggcgatagttcactttcactttgcccaaaccttgttctgtaacatacttcttggtagcttcaatggcttctttcaccgtaagtccgttcaaagagaagcctccttcaactggtttctcgggactattgatgacgataccttcttttgcgtcgaagctttcttccgaaacgtcggcaccttcgataagcggacggattggaagaccgaagtgtttggcaaacgcatagtcgcgactgtcgtgcgcaggcactgccataattgcacctgtgccatagcctgaaagcacgtattctgatatatagataggcaatttctcgcctgtgaaggggttgatgccatgagaaccagtgaagacacctgtaactttgcggtcggtc Mask Tandem Repeat Region ================================================ gaccgaccgcaaagttacaggtgtcttcactggttctcatggcatcaaccccttcacaggcgagaaattgcctatctatatatcagaatacgtgctttcaggctatggcacaggtgcaattatggcagtgcctgcgcacgacagtcgcgactatgcgtttgccaaacacttcggtcttccaatccgtccgcttatcgaaggtgccgacgtttcggaagaaagcttcgacgcaaaagaaggtatcgtcatcaatagtcccgagaaaccagttgaaggaggcttctctttgaacggacttacggtgaaagaagccattgaagctaccaagaagtatgttacagaacaaggtttgggcaaagtgaaagtgaactatcgcctgcgcgatgccattttctcacgccagcgttattggggcgaacccttcccagtttactataaagaaggtatgccttatatggttcctgcagaatgtttgccgctcgaattgccttcaatcgacaagtttgaacctaccgaaacgggcgagcctccattgggacgtgccaaggcttgggcttgggacgaacagaacaagaagattgtagacaaggaattgatagacaacaagactgttttcccattggaattgaacacaatgccgggctttgcgggcagttctgcatactaccttcgctatatggacccacacaacaacaaggctttggtgggcaaggaagccaacgaatattggcagaatgtagacctttatgtaggcggaacagagcacgcaacaggacacttgatatacagccgcttctggaacaagttcctttacgactacggttacagttgcaaggaagagccatacgaaaagttggtgaaccaaggaatgatacaaggacgttccaacttcgtatatcgtatcaattcagacgaccattcaaaagctcccgtatttgtaagccacggactgaaaggcgaatacgaaacaacgccaatccacgtagatgtgaacattgttcatgccgatgtgctcgacgttgaggctttcaaggcgtggcgaccagaatacgaaaacgccgaattcatacttgaagacggtaagtatatctgcggttgggcagtggaaaagatgtcgaagtcgatgttcaacgttgtcaatcccgacgacattgtagcgcaatatggtgccgataccttgcgtttgtacgaaatgttccttggtcctgtcgaggcaagcaagccttgggacaccaacggtatcgacggttgtttccgcttcttgaagaagttctggaaactgtatcagcaggaactgaacgacaacgagccttcaaaggaatcgctgaagagcgtgcataagctcattaaaaagatttcaagcgacatagaacaattctcttataataccgccatatcagcttttatgatttgtgtgaacgagttgggacagcaaaagtgcaacaaccgcggcttattgcgcagcttgctcatattgatagcaccgtttgcgccacacattgctgaagaactatgggagtctatcggcgagaatggcagcgtctgcgatgcacaatggccaacttgggacgaagccaatctggctgaaaacgaagttcagctgaccatttcgttcaacggaaaggctcgcttccaaatgactttccctaccgatgccagcaaggaagacattgaaaaggcagccgtaaacgatgagagaagcttgaaatacacagaaggaaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Find is-nt database================================================ Query_seq: PI2155:PI2156|PI2155:PI2156:hypothetical protein:conserved hypothetical protein; possible permease:->->:2101113..2102935 1823 gaccgaccgcaaagttacaggtgtcttcactggttctcatggcatcaaccccttcacaggcgagaaattgcctatctatatatcagaatacgtgctttcaggctatggcacaggtgcaattatggcagtgcctgcgcacgacagtcgcgactatgcgtttgccaaacacttcggtcttccaatccgtccgcttatcgaaggtgccgacgtttcggaagaaagcttcgacgcaaaagaaggtatcgtcatcaatagtcccgagaaaccagttgaaggaggcttctctttgaacggacttacggtgaaagaagccattgaagctaccaagaagtatgttacagaacaaggtttgggcaaagtgaaagtgaactatcgcctgcgcgatgccattttctcacgccagcgttattggggcgaacccttcccagtttactataaagaaggtatgccttatatggttcctgcagaatgtttgccgctcgaattgccttcaatcgacaagtttgaacctaccgaaacgggcgagcctccattgggacgtgccaaggcttgggcttgggacgaacagaacaagaagattgtagacaaggaattgatagacaacaagactgttttcccattggaattgaacacaatgccgggctttgcgggcagttctgcatactaccttcgctatatggacccacacaacaacaaggctttggtgggcaaggaagccaacgaatattggcagaatgtagacctttatgtaggcggaacagagcacgcaacaggacacttgatatacagccgcttctggaacaagttcctttacgactacggttacagttgcaaggaagagccatacgaaaagttggtgaaccaaggaatgatacaaggacgttccaacttcgtatatcgtatcaattcagacgaccattcaaaagctcccgtatttgtaagccacggactgaaaggcgaatacgaaacaacgccaatccacgtagatgtgaacattgttcatgccgatgtgctcgacgttgaggctttcaaggcgtggcgaccagaatacgaaaacgccgaattcatacttgaagacggtaagtatatctgcggttgggcagtggaaaagatgtcgaagtcgatgttcaacgttgtcaatcccgacgacattgtagcgcaatatggtgccgataccttgcgtttgtacgaaatgttccttggtcctgtcgaggcaagcaagccttgggacaccaacggtatcgacggttgtttccgcttcttgaagaagttctggaaactgtatcagcaggaactgaacgacaacgagccttcaaaggaatcgctgaagagcgtgcataagctcattaaaaagatttcaagcgacatagaacaattctcttataataccgccatatcagcttttatgatttgtgtgaacgagttgggacagcaaaagtgcaacaaccgcggcttattgcgcagcttgctcatattgatagcaccgtttgcgccacacattgctgaagaactatgggagtctatcggcgagaatggcagcgtctgcgatgcacaatggccaacttgggacgaagccaatctggctgaaaacgaagttcagctgaccatttcgttcaacggaaaggctcgcttccaaatgactttccctaccgatgccagcaaggaagacattgaaaaggcagccgtaaacgatgagagaagcttgaaatacacagaaggaaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI2155:PI2156|PI2155:PI2156:hypothetical protein:conserved hypothetical protein; possible permease:->->:2101113..2102935 1823 gaccgaccgcaaagttacaggtgtcttcactggttctcatggcatcaaccccttcacaggcgagaaattgcctatctatatatcagaatacgtgctttcaggctatggcacaggtgcaattatggcagtgcctgcgcacgacagtcgcgactatgcgtttgccaaacacttcggtcttccaatccgtccgcttatcgaaggtgccgacgtttcggaagaaagcttcgacgcaaaagaaggtatcgtcatcaatagtcccgagaaaccagttgaaggaggcttctctttgaacggacttacggtgaaagaagccattgaagctaccaagaagtatgttacagaacaaggtttgggcaaagtgaaagtgaactatcgcctgcgcgatgccattttctcacgccagcgttattggggcgaacccttcccagtttactataaagaaggtatgccttatatggttcctgcagaatgtttgccgctcgaattgccttcaatcgacaagtttgaacctaccgaaacgggcgagcctccattgggacgtgccaaggcttgggcttgggacgaacagaacaagaagattgtagacaaggaattgatagacaacaagactgttttcccattggaattgaacacaatgccgggctttgcgggcagttctgcatactaccttcgctatatggacccacacaacaacaaggctttggtgggcaaggaagccaacgaatattggcagaatgtagacctttatgtaggcggaacagagcacgcaacaggacacttgatatacagccgcttctggaacaagttcctttacgactacggttacagttgcaaggaagagccatacgaaaagttggtgaaccaaggaatgatacaaggacgttccaacttcgtatatcgtatcaattcagacgaccattcaaaagctcccgtatttgtaagccacggactgaaaggcgaatacgaaacaacgccaatccacgtagatgtgaacattgttcatgccgatgtgctcgacgttgaggctttcaaggcgtggcgaccagaatacgaaaacgccgaattcatacttgaagacggtaagtatatctgcggttgggcagtggaaaagatgtcgaagtcgatgttcaacgttgtcaatcccgacgacattgtagcgcaatatggtgccgataccttgcgtttgtacgaaatgttccttggtcctgtcgaggcaagcaagccttgggacaccaacggtatcgacggttgtttccgcttcttgaagaagttctggaaactgtatcagcaggaactgaacgacaacgagccttcaaaggaatcgctgaagagcgtgcataagctcattaaaaagatttcaagcgacatagaacaattctcttataataccgccatatcagcttttatgatttgtgtgaacgagttgggacagcaaaagtgcaacaaccgcggcttattgcgcagcttgctcatattgatagcaccgtttgcgccacacattgctgaagaactatgggagtctatcggcgagaatggcagcgtctgcgatgcacaatggccaacttgggacgaagccaatctggctgaaaacgaagttcagctgaccatttcgttcaacggaaaggctcgcttccaaatgactttccctaccgatgccagcaaggaagacattgaaaaggcagccgtaaacgatgagagaagcttgaaatacacagaaggaaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 20 Max: 1720 Len: 1701 Subject: gi|89107511|ref|AP_001291.1| leucyl-tRNA synthetase [Escherichia coli W3110] HSP 1 e-value: 2.0E-82 bit: 303.0 Len: 1701 Query Start:20 Query End:1720 Subject Strand: null Subject Start: 302 Subject End: 841 ................... G V F T G S H G I N P F T G E K L P I Y I S E Y V L S G Y G T G A I M A V P A H D S R D Y A F A K H F G L P I R P L I E G A D V S E E S F D - - - - A K E G I V I N S P E K P V E G G F S L N G L T V K E A I E A T K K Y V T E Q G L G K V K V N Y R L R D A I F S R Q R Y W G E P F P - V Y Y K E G M P Y M V P A E C L P L E L P S I D K F E P T E T G E P P L G R A K A W A W D E Q N K K I V D K E L I D N K T V F P L E L N T M P G F A G S S A Y Y L R Y M D P H N N K A L V G K E A N E Y W Q N V D L Y V G G T E H A T G H L I Y S R F W N K F L Y D Y G Y S C K E E P Y E K L V N Q G M I Q G R S N F V Y R I N S D D H S K A P V - - F V S H G L K G E Y E T T P I H V D V N I V H A D V L D V E A F K A W R P E Y E N A E F I L E D G K Y I C G W A V E K M S K S M F N V V N P D D I V A Q Y G A D T L R L Y E M F L G P V E A S K P W D T N G I D G C F R F L K K F W K L Y Q Q E - - - - - - - - L N D N - - - E P S K E S L K S V H K L I K K I S S D I - E Q F S Y N T A I S A F M I C V N E L G Q Q K C N - - - N R G L L R S L L I - - - - L I A P F A P H I A E E L W E S I G E N G S V C D A Q W P T W D E A N L A E N E V Q L T I S F N G K A R F Q M T F P T D A S K E D I E K A A V N D E R S L K Y T E G ....................................................................................................... ................... G V D T G F K A V H P L T G E E I P V W A A N F V L M E Y G T G A V M A V P G H D Q R D Y E F A S K Y G L N I K P V I L A A D G S E P D L S Q Q A L T E K G V L F N S G E - - - - - - - - F N G L D H E A A F N A I A D K L T A M G V G E R K V N Y R L R D W G V S R Q R Y W G A P I P M V T L E D G T V M P T P D D Q L P V I L P E D V V M D G I T S - - - P I K A D P E W A - - - - - - - - - - K T T V N G M P A L - R E T D T F D T F M E S S W Y Y A R Y T C P Q Y K E G M L D S E A A N Y W L P V D I Y I G G I E H A I M H L L Y F R F F H K L M R D A G M V N S D E P A K Q L L C Q G M V L A D A F Y Y V G E N G E R N W V S P V D A I V E R D E K G R I - - - - - - - - - - - - - - - - - - V K A K D A - - - - - - - - - - - - - A G H E L V Y T G M S K M S K S K N N G I D P Q V M V E R Y G A D T V R L F M M F A S P A D M T L E W Q E S G V E G A N R F L K R V W K L V Y E H T A K G D V A A L N V D A L T E N Q K A L R R D V H K T I A K V T D D I G R R Q T F N T A I A A I M E L M N K L A K A P T D G E Q D R A L M Q E A L L A V V R M L N P F T P H I C F T L W Q E L K G E G D I D N A P W P V A D E K A M V E D S T L V V V Q V N G K V R A K I T V P V D A T E E Q V R E R A G Q E H L V A K Y L D G ....................................................................................................... Find nr database================================================ Query_seq: PI2155:PI2156|PI2155:PI2156:hypothetical protein:conserved hypothetical protein; possible permease:->->:2101113..2102935 1823 gaccgaccgcaaagttacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 gaccgaccgcaaagttacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Predict ORF larger than 30AA ================================================ Protein_Len: 60 Strand: + Start: 67 End: 252 .................................................................. M A Y L Y I R I R A F R L W H R C N Y G S A C A R Q S R L C V C Q T L R S S N P S A Y R R C R R F G R K L R R K R R Y R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 21 End: 287 .................... M S S L V L M A S T P S Q A R N C L S I Y Q N T C F Q A M A Q V Q L W Q C L R T T V A T M R L P N T S V F Q S V R L S K ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 372 End: 581 ................................................................................................................................................................................................................................................................................................................................................................................... M A C A M P F S H A S V I G A N P S Q F T I K K V C L I W F L Q N V C R S N C L Q S T S L N L P K R A S L H W D V P R L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 645 End: 737 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R A V L H T T F A I W T H T T T R L W W A R K P T N I G R M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 532 End: 1020 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M G T C Q G L G L G R T E Q E D C R Q G I D R Q Q D C F P I G I E H N A G L C G Q F C I L P S L Y G P T Q Q Q G F G G Q ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 53 Strand: + Start: 996 End: 1154 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M F M P M C S T L R L S R R G D Q N T K T P N S Y L K T V S I S A V G Q W K R C R S R C S T L S I P T T L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 33 Strand: + Start: 1164 End: 1262 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M V P I P C V C T K C S L V L S R Q A S L G T P T V S T V V S A S ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 1090 End: 1338 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M R L G S G K D V E V D V Q R C Q S R R H C S A I W C R Y L A F V R N V P W S C R G K Q A L G H Q R Y R R L F P L L E E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 36 Strand: + Start: 1396 End: 1503 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S F Y D L C E R V G T A K V Q Q P R L I A Q L A H I D S T V C A T H C ................................................................................................................................................................................................................................................................................................................................ Protein_Len: 38 Strand: + Start: 1488 End: 1601 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R H T L L K N Y G S L S A R M A A S A M H N G Q L G T K P I W L K T K F S .............................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 44 End: 1777 ........................................... M N P F T G E K L P I Y I S E Y V L S G Y G T G A I M A V P A H D S R D Y A F A K H F G L P I R P L I E G A D V S E E S .............................................. Protein_Len: 60 Strand: - Start: 1600 End: 1815 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I V K G V S A L L S S M S F A A T F S S L L K F Y V S P F V I T F T I T T G F F I T F I T K L Y F L F Q V N T F Q F Y M ........ Protein_Len: 60 Strand: - Start: 1514 End: 1819 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S E R G I G A L F V N F L C G Y V I L S A Q F V C F S L S D Y L H Y N Y W L L N Y I D N K F L I F I A C E H V S L V A M .... Protein_Len: 60 Strand: - Start: 1384 End: 1578 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... A K I I Q T F S N P C C F H L L R P K N R L K S M N I A G N A G C M A S S S H S D I P S F P L T Q S A C H G V Q S S A M ..................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1140 End: 1322 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R R C Q L A I H H R Y R A N T R F T G Q D Q R P L C A K P C W R Y R R N N G S R S S T R S V T D A P V S R C R A K L P M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1003 End: 1242 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... N M S S S P L Y I Q P Q A T S F I D F D I N L T T L G S S M T A C Y P A S V K R K Y S I N R P G T S A L L G Q S V L P M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 923 End: 1291 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H R L R H E V N D I G V V N Y R L I T G I G Q T Q V F H E K T R D L C A L R P V G V T D V T T E A E Q L L E P F Q I L M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: - Start: 826 End: 996 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L Q L S S G Y S F N T F W P I I C P R E L K T Y R I L E S S W E F A G T N T L W P S F P S Y S V V G I W T S T F M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 513 End: 896 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ W R I N A S H L G K H L R F L A R L L V S S I C G S R S C T G K R S R N C N C P L A M R F T P S G L F S V L V N W S R M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 494 End: 907 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. P L I Y V K I Y A S C L V C C S V Q Y V A A E P V L E K V V V T V T A L F L W V F L Q H V L S H Y L S T G V E Y I T D M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 454 End: 654 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G S S N G E I S L N S G V S V P S G G N P R A L A Q A Q S S C F L F I T S L S N I S L L V T K G N S N F V I G P K A P M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 52 Strand: - Start: 339 End: 494 .................................................................................................................................................................................................................................................................................................................................................. L V L N P C L S L S S D G A R H W K R V G A N N P R V R G L K S Y L L Y A K Y P E Q L I N A A R I A K M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 154 End: 357 ......................................................................................................................................................... G I R G S I S P A S T E S S L K S A F S P I T M L L G S F G T S P P K E K F P S V T F S A M S A V L F Y T V S C P K P M .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 101 End: 385 .................................................................................................... V N R F F A E V C F F T D D D I T G L F W N F S A E R Q V S K R H F F G N F S G L L I N C F L T Q A F H F H V I A Q A M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. gaccgaccgcaaagttacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 81 Start: 1702 End: 1731 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAATACACAGAAGGAAAGACTATCGT............................................................................................ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ PromScan Matrix: RpoN Strand: - Score: 81 Start: 1480 End: 1496 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAAACGGTGCT....................................................................................................................................................................................................................................................................................................................................... gaccgaccgcaaagttacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: PI2155:PI2156|PI2155:PI2156:hypothetical protein:conserved hypothetical protein; possible permease:->->:2101113..2102935 1823 gaccgaccgcaaagttacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Intra-Species Hit: Count: 1 Min: 1721 Max: 1823 Len: 103 Subject: pint_PI2155_PI2156|hypothetical protein:conserved hypothetical protein; possible permease|POSITIVE:POSITIVE|[2101113,2102935]|1823 HSP 1 e-value: 8.0E-51 bit: 204.0 Len: 103 Query Start:1721 Query End:1823 Subject Strand: POSITIVE Subject Start: 1721 Subject End: 1823 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagactatcgtaaaggtgatagttgtaccaaagaagattgtaaatatcgtttttaaataaaataaaaattgcacattcgtgaactgaaagtacagccacgaat Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAGACUAUCGUAAAGGUGAUAGUUGUACCAAAGAAGAUUGUAAAUAUCGUUUUUAAAUAAAAUAAAAAUUGCACAUUCGUGAACUGAAAGUACAGCCACGAAU ..((((((((......))))))))..............(((((.....(((((.....))))).....))))).(((((((..(((......))).))))))) (-17.60) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUUCGUGGCUGUACUUUCAGUUCACGAAUGUGCAAUUUUUAUUUUAUUUAAAAACGAUAUUUACAAUCUUCUUUGGUACAACUAUCACCUUUACGAUAGUCUU (((((((((((......))).))))))))((((..((((((.......)))))).(((.......))).......)))).((((((........))))))... (-19.90) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 229 99 65 31 5 pint:PI0726|5end_hypothetical_protein_659042..659272_POSITIVE 227 49 14 223 184 pint:PI1129|5end_hypothetical_protein_1055377..1055607_POSITIVE 218 34 1 33 1 pint:PI1080|5end_conserved_hypothetical_protein;_possible_outer_membrane_lipoprotein_1000264..1000494_POSITIVE 217 50 2 51 4 pint:PI1565|5end_conserved_hypothetical_protein;_possible_surface_antigen_1485460..1485690_POSITIVE 216 60 12 219 165 pint:PI1983|5end_possible_xylanase_1939151..1939381_POSITIVE 214 98 66 50 17 pint:PI1603|5end_hypothetical_protein_1533779..1534009_POSITIVE 213 100 63 231 200 pint:PI2034|5end_conserved_hypothetical_protein_1987573..1987803_POSITIVE 213 99 55 123 76 pint:PI0152|5end_DNA_mismatch_endonuclease_vsr_145314..145544_POSITIVE 211 50 2 118 70 pint:PI0552|5end_hypothetical_protein_502716..502946_POSITIVE 210 95 67 68 34 pint:PI1247|5end_conserved_hypothetical_protein_1171630..1171860_POSITIVE 207 99 71 198 177 pint:PI0121|5end_outer_membrane_protein,_ompH_family_112625..112855_POSITIVE 203 100 68 177 131 pint:PI0471|5end_50S_ribosomal_protein_L24_437736..437966_POSITIVE 202 54 13 85 44 pint:PI1791|5end_conserved_hypothetical_protein_1718489..1718719_POSITIVE 202 54 13 77 36 pint:PI1788|5end_hypothetical_protein_1718481..1718711_POSITIVE 199 100 68 56 27 pint:PI0146|5end_transcription_elongation_factor_140338..140568_POSITIVE 198 56 15 204 161 pint:PI0651|5end_HD_superfamily_hydrolase_592270..592500_POSITIVE 196 96 69 156 119 pint:PI0821|5end_conserved_hypothetical_protein_760063..760293_POSITIVE 196 97 76 134 113 pint:PI0750|5end_zinc_protease_677746..677976_POSITIVE 194 97 74 141 120 pint:PI1381|5end_conserved_hypothetical_protein_1303060..1303290_POSITIVE 191 53 14 37 3 pint:PI0247|5end_conjugative_transposon_protein,_TraA_245373..245603_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 239 100 70 70 40 pint:PI2154|3end_leucyl-tRNA_synthetase_2102829..2102979_POSITIVE 211 49 1 85 41 pint:PI1723|3end_conserved_hypothetical_protein_1642133..1642283_POSITIVE 206 100 65 44 13 pint:PI1516|3end_multidrug_resistance_protein;_HlyD_family_secretion_protein_1435693..1435843_POSITIVE 205 96 69 143 101 pint:PI0811|3end_protease/hemagglutinin_PrtT,_streptopain_family_749937..750087_POSITIVE 205 98 58 151 115 pint:PI0103|3end_conserved_hypothetical_protein;_possible_permease_99100..99250_POSITIVE 202 48 1 78 8 pint:PI1040|3end_8-amino-7-oxononanoate_synthase_960202..960352_POSITIVE 197 42 2 51 14 pint:PI1014|3end_prismane_protein,_hybrid-cluster_protein_936132..936282_POSITIVE 195 56 14 50 4 pint:PI0645|3end_hypothetical_protein_586807..586957_POSITIVE 193 100 69 114 84 pint:PI0056|3end_conserved_hypothetical_protein;_possible_DNA_uptake_protein_55907..56057_POSITIVE 189 49 8 73 25 pint:PI0235|3end_hypothetical_protein_235953..236103_POSITIVE 187 38 1 121 80 pint:PI1414|3end_conserved_hypothetical_protein_1334436..1334586_POSITIVE 187 100 69 66 37 pint:PI0704|3end_conserved_hypothetical_protein_641364..641514_POSITIVE 186 88 42 47 2 pint:PI0453|3end_conserved_hypothetical_protein_427194..427344_POSITIVE 183 36 1 61 20 pint:PI1065|3end_hypothetical_protein_983650..983800_POSITIVE 182 99 75 40 13 pint:PI0643|3end_hypothetical_protein_586660..586810_POSITIVE 182 31 1 34 6 pint:PI0619|3end_hypothetical_protein_569572..569722_POSITIVE 181 29 2 47 18 pint:PI1719|3end_conserved_hypothetical_protein_1636207..1636357_POSITIVE 181 50 2 110 51 pint:PI0654|3end_K+-dependent_Na+/Ca+_exchanger_related-protein_597223..597373_POSITIVE 180 100 60 51 12 pint:PI1954|3end_translation_initiation_factor_IF-2_1911647..1911797_POSITIVE 180 41 1 140 102 pint:PI0772|3end_conserved_hypothetical_protein_708481..708631_POSITIVE