Origin IGS:
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaataatatttttacaatggacaaactgtttctcatcgacgcttacgcacttatctatcggtcgtattatgccctcatcagaaatccgcgtatcaactcaaaaggagtgaatacatcggctatt
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
aatagccgatgtattcactccttttgagttgatacgcggatttctgatgagggcataatacgaccgatagataagtgcgtaagcgtcgatgagaaacagtttgtccattgtaaaaatattatttaagggtaaaattactaaaaaaatgccacaattaccgatattattcattatttttgtatcaaaataatttttgaatggattatctgtcgattataaaagaaccgattagtcaggaattaaacgactttatctcactgtttaacaaagcgttaatgcacgaagaagggctgctttcgcgtgcgttggagcatatacgaaacaggggaggaaagcgt

Mask Tandem Repeat Region ================================================
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaataatatttttacaatggacaaactgtttctcatcgacgcttacgcacttatctatcggtcgtattatgccctcatcagaaatccgcgtatcaactcaaaaggagtgaatacatcggctatt

Find is-nt database================================================
Query_seq: PI2129:PI2130|PI2129:PI2130:octaprenyl-diphosphate synthase:DNA polymerase I:->->:2077782..2078119 338
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaataatatttttacaatggacaaactgtttctcatcgacgcttacgcacttatctatcggtcgtattatgccctcatcagaaatccgcgtatcaactcaaaaggagtgaatacatcggctatt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: PI2129:PI2130|PI2129:PI2130:octaprenyl-diphosphate synthase:DNA polymerase I:->->:2077782..2078119 338
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaataatatttttacaatggacaaactgtttctcatcgacgcttacgcacttatctatcggtcgtattatgccctcatcagaaatccgcgtatcaactcaaaaggagtgaatacatcggctatt
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: PI2129:PI2130|PI2129:PI2130:octaprenyl-diphosphate synthase:DNA polymerase I:->->:2077782..2078119 338
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaataatatttttacaatggacaaactgtttctcatcgacgcttacgcacttatctatcggtcgtattatgccctcatcagaaatccgcgtatcaactcaaaaggagtgaatacatcggctatt
Intra-Species Hit: Count: 0

Inter-species Hit: Count: 16	Min: 219	Max: 338	Len: 120
Subject: UniRef90_Q8A2P5 Cluster: DNA polymerase I; n=1; Bacteroides thetaiotaomicron|Rep: DNA polymerase I - Bacteroides thetaiotaomicron
HSP  1	e-value: 2.0E-9	bit: 63.5	Len: 105	Query Start:234	Query End:338	Subject Strand: null	Subject Start: 5	Subject End: 39
......................................................................................................................................................................................................................................... D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
......................................................................................................................................................................................................................................... N  K  L  F  L  L  D  A  Y  A  L  I  Y  R  A  Y  Y  A  F  I  K  N  P  R  I  N  S  K  G  F  N  T  S  A  I 

Subject: UniRef90_Q650I4 Cluster: DNA polymerase I; n=2; Bacteroides fragilis|Rep: DNA polymerase I - Bacteroides fragilis
HSP  1	e-value: 3.0E-9	bit: 63.2	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 6	Subject End: 39
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ K  L  F  L  L  D  A  Y  A  L  I  Y  R  A  Y  Y  A  F  I  K  N  P  R  I  N  S  K  G  F  N  T  S  A  I 

Subject: UniRef90_A3U5U0 Cluster: DNA polymerase I; n=1; Croceibacter atlanticus HTCC2559|Rep: DNA polymerase I - Croceibacter atlanticus HTCC2559
HSP  1	e-value: 8.0E-9	bit: 61.6	Len: 111	Query Start:228	Query End:338	Subject Strand: null	Subject Start: 8	Subject End: 44
................................................................................................................................................................................................................................... T  M  D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
................................................................................................................................................................................................................................... T  Q  K  R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  L  I  K  N  P  R  V  N  S  K  G  M  D  T  S  A  I 

Subject: UniRef90_A4CGC7 Cluster: Putative DNA polymerase I; n=1; Robiginitalea biformata HTCC2501|Rep: Putative DNA polymerase I - Robiginitalea biformata HTCC2501
HSP  1	e-value: 2.0E-8	bit: 60.5	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 6	Subject End: 39
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  L  I  K  N  P  R  I  N  S  K  G  M  D  T  S  A  I 

Subject: UniRef90_Q1XND9 Cluster: DNA polymerase A; n=1; Flavobacterium johnsoniae UW101|Rep: DNA polymerase A - Flavobacterium johnsoniae UW101
HSP  1	e-value: 2.0E-8	bit: 60.5	Len: 111	Query Start:228	Query End:338	Subject Strand: null	Subject Start: 3	Subject End: 39
................................................................................................................................................................................................................................... T  M  D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
................................................................................................................................................................................................................................... T  Q  K  R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  F  I  K  N  P  R  I  N  S  K  G  M  D  T  S  A  I 

Subject: UniRef90_A0LXN4 Cluster: DNA polymerase I; n=1; Gramella forsetii KT0803|Rep: DNA polymerase I - Gramella forsetii (strain KT0803)
HSP  1	e-value: 2.0E-8	bit: 60.1	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 6	Subject End: 39
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  F  I  K  N  P  R  I  N  S  K  G  F  N  T  S  A  I 

Subject: UniRef90_A2TXK1 Cluster: DNA polymerase I; n=1; Polaribacter dokdonensis MED152|Rep: DNA polymerase I - Polaribacter dokdonensis MED152
HSP  1	e-value: 4.0E-8	bit: 59.3	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 6	Subject End: 39
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  V  D  A  Y  A  L  I  F  R  G  Y  Y  A  F  I  K  N  P  R  I  N  S  K  G  L  D  T  S  A  I 

Subject: UniRef90_A3XHP6 Cluster: Putative DNA polymerase I; n=1; Leeuwenhoekiella blandensis MED217|Rep: Putative DNA polymerase I - Leeuwenhoekiella blandensis MED217
HSP  1	e-value: 5.0E-8	bit: 58.9	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 6	Subject End: 39
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  L  I  K  N  P  R  V  N  S  K  G  Q  D  T  S  A  I 

Subject: UniRef90_A3J432 Cluster: DNA polymerase I; n=1; Flavobacteria bacterium BAL38|Rep: DNA polymerase I - Flavobacteria bacterium BAL38
HSP  1	e-value: 5.0E-8	bit: 58.9	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 5	Subject End: 38
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  F  I  K  N  P  R  I  N  S  K  G  M  D  T  S  A  I 

Subject: UniRef90_A4AMM5 Cluster: DNA polymerase I; n=1; Flavobacteriales bacterium HTCC2170|Rep: DNA polymerase I - Flavobacteriales bacterium HTCC2170
HSP  1	e-value: 5.0E-8	bit: 58.9	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 6	Subject End: 39
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  L  D  A  F  A  L  I  F  R  G  Y  Y  A  L  I  K  N  P  R  I  N  S  K  G  M  D  T  S  A  I 

Subject: UniRef90_Q1VTJ2 Cluster: DNA polymerase I; n=1; Psychroflexus torquis ATCC 700755|Rep: DNA polymerase I - Psychroflexus torquis ATCC 700755
HSP  1	e-value: 5.0E-8	bit: 58.9	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 6	Subject End: 39
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  V  D  A  Y  A  M  I  F  R  G  Y  Y  A  L  I  K  N  P  R  I  N  S  K  G  Q  D  T  S  A  I 

Subject: UniRef90_Q26HV1 Cluster: DNA polymerase I; n=1; Flavobacteria bacterium BBFL7|Rep: DNA polymerase I - Flavobacteria bacterium BBFL7
HSP  1	e-value: 9.0E-8	bit: 58.2	Len: 102	Query Start:237	Query End:338	Subject Strand: null	Subject Start: 10	Subject End: 43
............................................................................................................................................................................................................................................ K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
............................................................................................................................................................................................................................................ R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  L  I  K  N  P  R  I  N  S  A  G  M  D  T  S  A  I 

Subject: UniRef90_A4BY69 Cluster: DNA polymerase I; n=1; Polaribacter irgensii 23-P|Rep: DNA polymerase I - Polaribacter irgensii 23-P
HSP  1	e-value: 3.0E-7	bit: 56.2	Len: 120	Query Start:219	Query End:338	Subject Strand: null	Subject Start: 32	Subject End: 71
.......................................................................................................................................................................................................................... N  I  F  T  M  D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
.......................................................................................................................................................................................................................... N  M  S  D  Q  K  R  V  F  L  V  D  A  F  A  L  I  F  R  G  Y  Y  A  F  I  K  N  P  Q  I  N  S  K  G  L  D  T  S  A  I 

Subject: UniRef90_A2TS28 Cluster: Putative DNA polymerase I; n=1; Dokdonia donghaensis MED134|Rep: Putative DNA polymerase I - Dokdonia donghaensis MED134
HSP  1	e-value: 4.0E-7	bit: 55.8	Len: 111	Query Start:228	Query End:338	Subject Strand: null	Subject Start: 8	Subject End: 44
................................................................................................................................................................................................................................... T  M  D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
................................................................................................................................................................................................................................... T  Q  K  R  L  F  L  L  D  A  Y  A  L  I  F  R  G  Y  Y  A  L  I  K  N  P  R  I  T  S  S  G  M  D  V  S  A  I 

Subject: UniRef90_A1ZJR3 Cluster: DNA polymerase I; n=1; Microscilla marina ATCC 23134|Rep: DNA polymerase I - Microscilla marina ATCC 23134
HSP  1	e-value: 2.0E-6	bit: 53.9	Len: 108	Query Start:231	Query End:338	Subject Strand: null	Subject Start: 1	Subject End: 36
...................................................................................................................................................................................................................................... M  D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
...................................................................................................................................................................................................................................... M  K  K  L  F  L  L  D  A  M  A  M  I  Y  R  A  H  F  A  F  S  K  N  P  R  I  N  S  K  G  M  N  T  G  A  V 

Subject: UniRef90_Q7MTY3 Cluster: DNA polymerase type I; n=1; Porphyromonas gingivalis|Rep: DNA polymerase type I - Porphyromonas gingivalis (Bacteroides gingivalis)
HSP  1	e-value: 8.0E-6	bit: 51.6	Len: 105	Query Start:234	Query End:338	Subject Strand: null	Subject Start: 3	Subject End: 37
......................................................................................................................................................................................................................................... D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
......................................................................................................................................................................................................................................... E  R  L  F  L  L  D  A  Y  A  L  I  F  R  A  Y  Y  A  F  I  R  S  P  R  I  D  S  T  G  R  D  T  G  A  V 


acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
Predict ORF larger than 30AA ================================================
Protein_Len: 30	Strand: +	Start: 14	End: 103
............. M  F  R  I  C  S  N  A  R  E  S  S  P  S  S  C  I  N  A  L  L  N  S  E  I  K  S  F  N  S ...........................................................................................................................................................................................................................................
Protein_Len: 35	Strand: +	Start: 217	End: 321
........................................................................................................................................................................................................................ M  I  F  L  Q  W  T  N  C  F  S  S  T  L  T  H  L  S  I  G  R  I  M  P  S  S  E  I  R  V  S  T  Q  K  E .................
Protein_Len: 58	Strand: +	Start: 165	End: 338
.................................................................................................................................................................... M  M  N  N  I  G  N  C  G  I  F  L  V  I  L  P  L  N  N  I  F  T  M  D  K  L  F  L  I  D  A  Y  A  L  I  Y  R  S  Y  Y  A  L  I  R  N  P  R  I  N  S  K  G  V  N  T  S  A  I 
Protein_Len: 33	Strand: -	Start: 152	End: 250
....................................................................................................................................................... K  S  V  F  I  I  F  L  I  P  L  Q  P  M  K  K  T  I  K  G  K  F  L  I  K  V  I  S  L  S  N  R  M ........................................................................................
Protein_Len: 47	Strand: -	Start: 1	End: 141
 R  K  G  G  R  N  R  I  H  E  L  A  R  S  L  L  G  E  E  H  M  L  A  K  N  F  L  S  I  F  D  N  L  E  Q  S  I  P  E  K  I  I  S  L  Y  D  M .....................................................................................................................................................................................................

acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
Predict TransTerm conf > 70================================================

Find igs database================================================
Query_seq: PI2129:PI2130|PI2129:PI2130:octaprenyl-diphosphate synthase:DNA polymerase I:->->:2077782..2078119 338
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
Intra-Species Hit: Count: 1	Min: 1	Max: 218	Len: 218
Subject: pint_PI2129_PI2130|octaprenyl-diphosphate synthase:DNA polymerase I|POSITIVE:POSITIVE|[2077782,2078119]|338
HSP  1	e-value: 1.0E-120	bit: 432.0	Len: 218	Query Start:1	Query End:218	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 218
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaat........................................................................................................................
acgctttcctcccctgtttcgtatatgctccaacgcacgcgaaagcagcccttcttcgtgcattaacgctttgttaaacagtgagataaagtcgtttaattcctgactaatcggttcttttataatcgacagataatccattcaaaaattattttgatacaaaaataatgaataatatcggtaattgtggcatttttttagtaattttacccttaaat........................................................................................................................

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
ACGCUUUCCUCCCCUGUUUCGUAUAUGCUCCAACGCACGCGAAAGCAGCCCUUCUUCGUGCAUUAACGCUUUGUUAAACAGUGAGAUAAAGUCGUUUAAUUCCUGACUAAUCGGUUCUUUUAUAAUCGACAGAUAAUCCAUUCAAAAAUUAUUUUGAUACAAAAAUAAUGAAUAAUAUCGGUAAUUGUGGCAUUUUUUUAGUAAUUUUACCCUUAAAU
..(((...(((..((((((..((...((......(((((.(((........)))..)))))......))..))..)))))).))).....((((..(((((.((((....((((((.......))))))..........(((((....(((((((......))))))))))))....)))).)))))))))........)))................ (-32.70)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
AUUUAAGGGUAAAAUUACUAAAAAAAUGCCACAAUUACCGAUAUUAUUCAUUAUUUUUGUAUCAAAAUAAUUUUUGAAUGGAUUAUCUGUCGAUUAUAAAAGAACCGAUUAGUCAGGAAUUAAACGACUUUAUCUCACUGUUUAACAAAGCGUUAAUGCACGAAGAAGGGCUGCUUUCGCGUGCGUUGGAGCAUAUACGAAACAGGGGAGGAAAGCGU
.......((((...............)))).........(((((..............)))))....((((((((((...((((.(((............)))...))))..)))))))))).(((.((((.((((.((((((......((.((((((((((..(((((....))))).)))))))))).)).......))))))))))..))))))) (-47.22)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
353	50	1	89	28	pint:PI0207|5end_conserved_hypothetical_protein_199797..200027_POSITIVE
352	50	2	89	32	pint:PI0587|5end_conserved_hypothetical_protein_534416..534646_POSITIVE
339	80	35	62	5	pint:PI1389|5end_transcriptional_regulator,_LuxR_family_1310039..1310269_POSITIVE
331	60	15	41	2	pint:PI2177|5end_phosphoribosylaminoimidazole_carboxylase_2117127..2117357_POSITIVE
331	69	21	95	46	pint:PI0705|5end_conserved_hypothetical_protein;_possible_lipoprotein_641274..641504_POSITIVE
319	42	3	231	177	pint:PI1700|5end_hypothetical_protein_1617607..1617837_POSITIVE
314	76	35	52	8	pint:PI1064|5end_hypothetical_protein_983071..983301_POSITIVE
312	74	39	98	71	pint:PI2157|5end_xanthosine_triphosphate_pyrophosphatase,_HAM1_family_2103736..2103966_POSITIVE
312	69	25	98	48	pint:PI2100|5end_conserved_hypothetical_protein_2053351..2053581_POSITIVE
309	85	45	56	15	pint:PI1050|5end_conserved_hypothetical_protein_967246..967476_POSITIVE
307	50	3	170	134	pint:PI0427|5end_conserved_hypothetical_protein_391140..391370_POSITIVE
304	74	35	196	152	pint:PI0707|5end_conserved_hypothetical_protein;_possible_integral_membrane_protein_643358..643588_POSITIVE
301	80	35	98	42	pint:PI2128|5end_hypothetical_protein_2076512..2076742_POSITIVE
300	58	13	185	138	pint:PI0008|5end_exoribonuclease_II_(ribonuclease_II)_7238..7468_POSITIVE
300	58	13	146	99	pint:PI0006|5end_hypothetical_protein_7199..7429_POSITIVE
298	80	35	215	168	pint:PI0197|5end_acetate_kinase_188602..188832_POSITIVE
298	80	35	48	1	pint:PI0196|5end_hypothetical_protein_188435..188665_POSITIVE
298	61	23	67	15	pint:PI0139|5end_pyridoxine_biosynthesis_protein_131835..132065_POSITIVE
297	57	14	211	177	pint:PI1796|5end_2-hydroxyhepta-2,4-diene-1,7-dioate_isomerase,_fumarylacetoacetate_hydrolase_family_protein_1730452..1730682_POSITIVE
297	51	12	95	55	pint:PI1009|5end_cytochrome_c_nitrite_reductase,_large_subunit_929342..929572_POSITIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
353	50	1	68	7	pint:PI0206|3end_TPR-repeat-containing_protein_199856..200006_POSITIVE
332	69	26	104	46	pint:PI0684|3end_coproporphyrinogen_III_oxidase_620507..620657_POSITIVE
331	69	21	105	56	pint:PI0704|3end_conserved_hypothetical_protein_641364..641514_POSITIVE
309	85	45	71	30	pint:PI1049|3end_hypothetical_protein_967341..967491_POSITIVE
299	60	21	132	93	pint:PI2093|3end_hypothetical_protein_2049440..2049590_POSITIVE
299	60	21	98	59	pint:PI2092|3end_hypothetical_protein_2049406..2049556_POSITIVE
296	68	25	70	18	pint:PI0261|3end_conjugative_transposon_protein,_TraK_254765..254915_POSITIVE
294	49	1	106	46	pint:PI0528|3end_hypothetical_protein_483122..483272_POSITIVE
292	50	3	135	97	pint:PI1715|3end_conserved_hypothetical_protein;_possible_DNA-binding_protein,_histone-like_family_1632324..1632474_POSITIVE
290	72	33	136	86	pint:PI0061|3end_hypothetical_protein_60690..60840_POSITIVE
289	47	1	150	101	pint:PI1184|3end_conserved_hypothetical_protein_1106163..1106313_POSITIVE
288	73	35	151	108	pint:PI0706|3end_pyridoxal_phosphate_biosynthetic_protein_(4-hydroxythreonine-4-phosphate_dehydrogenase)_643394..643544_POSITIVE
287	60	11	68	26	pint:PI0257|3end_conjugative_transposon_protein,_TraF_249802..249952_POSITIVE
283	80	35	61	17	pint:PI0838|3end_DNA_replication_and_repair_protein_773927..774077_POSITIVE
282	60	13	99	50	pint:PI0128|3end_dipeptidase,_pathogenicity_island-encoded_protein_D_121826..121976_POSITIVE
280	81	45	137	93	pint:PI1245|3end_hypothetical_protein_1171492..1171642_POSITIVE
280	81	45	141	97	pint:PI1246|3end_conserved_hypothetical_protein;_possible_lipoprotein_1171496..1171646_POSITIVE
277	43	12	46	15	pint:PI1637|3end_hypothetical_protein_1555284..1555434_POSITIVE
277	58	13	104	58	pint:PI1622|3end_hypothetical_protein_1547230..1547380_POSITIVE
276	73	43	54	24	pint:PI0067|3end_hypothetical_protein_66586..66736_POSITIVE