Origin IGS: taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taagacggaaaaaacatctctttaaaaaagttgaataacatctgaaggcgaaaaagattacctcatcaaaatagccttacagtatctaaaaatcaataatcccacagtcctcataccctttggactgtgggattatttcgtttttgcccttcttcgatagaatcttctttcagggaacaacttctacttagctgcttatacgaaatgctgaaaacaactttagtatttcaaaaacataaattttatatcctgcaatgaacagataggaggtgatttatcacgttcttgtcacccaagaaaaatgttttcacctaatatttctaagcttcctaaggtttctataaacctttaagccaacacgtgaaaatcgctttggttttgtaaagataattcgttaagaaaacgataatttcgatttgacgttgcgaaagcagctcttttgcaacgcaaaacctatgcttttaccgtgcaaaacagccgcttttaggatgcaaaacaataggttttgtaacgcactgatgattaggctgttatgcgaaaatttttcttgtgaaaaatatttacagtattttagccttttctctatgcataaaacacagtatttagtaaaagcaacattgttcgtaaaaggctctttctgttcaccaaggattacattatactgctatttccgaatgacttactgctgtcactaccaataataattaaaacaaacaacaatagaaacaaaataataagagggtgaaccaaaaacgctttttggacaccctcttactcaaacatcagcaattaaataaattaataactaatcatagatagttaagtggtacgtaagtta Mask Tandem Repeat Region ================================================ taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Find is-nt database================================================ Query_seq: PI2051:PI2052|PI2051:PI2052:hypothetical protein:hypothetical protein:->->:2007896..2008733 838 taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI2051:PI2052|PI2051:PI2052:hypothetical protein:hypothetical protein:->->:2007896..2008733 838 taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI2051:PI2052|PI2051:PI2052:hypothetical protein:hypothetical protein:->->:2007896..2008733 838 taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Predict ORF larger than 30AA ================================================ Protein_Len: 32 Strand: + Start: 89 End: 184 ........................................................................................ M V H P L I I L F L L L F V L I I I G S D S S K S F G N S S I M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 187 End: 441 .......................................................................................................................................................................................... M L G E Q K E P F T N N V A F T K Y C V L C I E K R L K Y C K Y F S Q E K F S H N S L I I S A L Q N L L F C I L K A A V ............................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 33 Strand: + Start: 389 End: 487 .................................................................................................................................................................................................................................................................................................................................................................................................... M R C K R A A F A T S N R N Y R F L N E L S L Q N Q S D F H V L A ............................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 405 End: 497 .................................................................................................................................................................................................................................................................................................................................................................................................................... M L S Q R Q I E I I V F L T N Y L Y K T K A I F T C W L K G L ..................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 633 End: 725 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M S Y K Q L S R S C S L K E D S I E E G Q K R N N P T V Q R V ................................................................................................................. Protein_Len: 41 Strand: - Start: 682 End: 804 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R L L A F V F Y D W L G F P I L V T P N N I K L Y Q L A I K I L Y D K E G E S T M .................................. Protein_Len: 31 Strand: - Start: 651 End: 743 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... T S T T G Q F F I R D F F P L F S I I G C D L P Y S S Q P I M ............................................................................................... Protein_Len: 43 Strand: - Start: 584 End: 712 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q L I Y F K H K Q F V L T T K L M E Y L C S L L L Q E R F S S E I S S P C F R F L G M .............................................................................................................................. Protein_Len: 38 Strand: - Start: 490 End: 603 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L N I S V K P L K S I N P S F M K R P H C S R S L D G G I Q E N C S I F N M ........................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 141 End: 422 ............................................................................................................................................ T K H M S F L S F Y Q L Y K E C S F N E C L L R I M L A N C F R N N Q M R F A A T K C P L L M P K A N C F L Q K R L T M ................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 42 Strand: - Start: 97 End: 222 ................................................................................................ G R I I K N R N N N T K I I I P L S L L L D N P F L L I I Y D K T F L F L R K R V M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 82 Start: 112 End: 141 ...............................................................................................................GTTTCTATTGTTGTTTGTTTTAATTATTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 100 HP_score: -10.7 Tail_Score: -5.11389 Start: 62 End: 107 Full_Region: TAATTGCTGATGTTT GAGTAAGAGGGTGTCCAAAAA GCG TTTTTGGTTCACCCTCTTATTA TTTTGTTTCTATTGT .............................................................GAGTAAGAGGGTGTCCAAAAAGCGTTTTTGGTTCACCCTCTTATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -14.6 Tail_Score: -4.60302 Start: 65 End: 104 Full_Region: TTGCTGATGTTTGAG TAAGAGGGTGTCCAAAAA GCG TTTTTGGTTCACCCTCTTA TTATTTTGTTTCTAT ................................................................TAAGAGGGTGTCCAAAAAGCGTTTTTGGTTCACCCTCTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 89 HP_score: -11.9 Tail_Score: -3.14931 Start: 68 End: 101 Full_Region: gaaacaaaataataa gagggtgaaccaaaaa cgc tttttggacaccctc ttactcaaacatcag ...................................................................gagggtgaaccaaaaacgctttttggacaccctc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 82 HP_score: -9.8 Tail_Score: -3.54424 Start: 358 End: 408 Full_Region: TTTTGCATCCTAAAA GCGGCTGTTTTGCACGGTAAAAGC ATA GGTTTTGCGTTGCAAAAGAGCTGC TTTCGCAACGTCAAA .....................................................................................................................................................................................................................................................................................................................................................................GCGGCTGTTTTGCACGGTAAAAGCATAGGTTTTGCGTTGCAAAAGAGCTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 41 HP_score: -2.3 Tail_Score: -2.84327 Start: 382 End: 428 Full_Region: TTGCACGGTAAAAGC ATAGGTTTTGCGTTGCAAAAG AGCTG CTTTCGCAACGTCAAATCGAA ATTATCGTTTTCTTA .............................................................................................................................................................................................................................................................................................................................................................................................ATAGGTTTTGCGTTGCAAAAGAGCTGCTTTCGCAACGTCAAATCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 57 HP_score: -6.2 Tail_Score: -3.10537 Start: 385 End: 425 Full_Region: gaaaacgataatttc gatttgacgttgcgaaag cagct cttttgcaacgcaaaacc tatgcttttaccgtg ................................................................................................................................................................................................................................................................................................................................................................................................gatttgacgttgcgaaagcagctcttttgcaacgcaaaacc............................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 74 HP_score: -5.5 Tail_Score: -4.70626 Start: 699 End: 745 Full_Region: acagtatctaaaaat caataatcccacagtcc tcatacccttt ggactgtgggattatttcg tttttgcccttcttc ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................caataatcccacagtcctcataccctttggactgtgggattatttcg............................................................................................. TransTerm Strand: + Conf: 86 HP_score: -8.2 Tail_Score: -4.69664 Start: 700 End: 746 Full_Region: AAGAAGGGCAAAAAC GAAATAATCCCACAGTCC AAAGGGTATGA GGACTGTGGGATTATTGA TTTTTAGATACTGTA ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATAATCCCACAGTCCAAAGGGTATGAGGACTGTGGGATTATTGA............................................................................................ TransTerm Strand: - Conf: 100 HP_score: -13.4 Tail_Score: -4.32649 Start: 704 End: 742 Full_Region: gtatctaaaaatcaa taatcccacagtcc tcatacccttt ggactgtgggatta tttcgtttttgccct ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................taatcccacagtcctcataccctttggactgtgggatta................................................................................................ TransTerm Strand: + Conf: 100 HP_score: -13.4 Tail_Score: -3.83042 Start: 704 End: 742 Full_Region: AGGGCAAAAACGAAA TAATCCCACAGTCC AAAGGGTATGA GGACTGTGGGATTA TTGATTTTTAGATAC ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATCCCACAGTCCAAAGGGTATGAGGACTGTGGGATTA................................................................................................ TransTerm Strand: + Conf: 93 HP_score: -10.7 Tail_Score: -4.0257 Start: 707 End: 739 Full_Region: GCAAAAACGAAATAA TCCCACAGTCC AAAGGGTATGA GGACTGTGGGA TTATTGATTTTTAGA ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCACAGTCCAAAGGGTATGAGGACTGTGGGA................................................................................................... Find igs database================================================ Query_seq: PI2051:PI2052|PI2051:PI2052:hypothetical protein:hypothetical protein:->->:2007896..2008733 838 taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Intra-Species Hit: Count: 54 Min: 1 Max: 838 Len: 838 Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 0.0 bit: 1661.0 Len: 838 Query Start:1 Query End:838 Subject Strand: POSITIVE Subject Start: 1 Subject End: 838 taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta taacttacgtaccacttaactatctatgattagttattaatttatttaattgctgatgtttgagtaagagggtgtccaaaaagcgtttttggttcaccctcttattattttgtttctattgttgtttgttttaattattattggtagtgacagcagtaagtcattcggaaatagcagtataatgtaatccttggtgaacagaaagagccttttacgaacaatgttgcttttactaaatactgtgttttatgcatagagaaaaggctaaaatactgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcacctcctatctgttcattgcaggatataaaatttatgtttttgaaatactaaagttgttttcagcatttcgtataagcagctaagtagaagttgttccctgaaagaagattctatcgaagaagggcaaaaacgaaataatcccacagtccaaagggtatgaggactgtgggattattgatttttagatactgtaaggctattttgatgaggtaatctttttcgccttcagatgttattcaacttttttaaagagatgttttttccgtctta Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 4.0E-88 bit: 327.0 Len: 229 Query Start:332 Query End:560 Subject Strand: NEGATIVE Subject Start: 57 Subject End: 285 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtg...................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagcagctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaatcgaagcgattttcacgtgttggcttaaaggattataggaaccttaggaagattagaaatactatgtgaaaacatttttcctcggtgtcaggaacgtg...................................................................................................................................................................................................................................................................................... Subject: pint_PI2056_PI2057|conserved hypothetical protein:conserved hypothetical protein; possible metal-dependent membrane protease|POSITIVE:POSITIVE|[2014489,2015078]|590 HSP 1 e-value: 5.0E-78 bit: 293.0 Len: 310 Query Start:328 Query End:637 Subject Strand: NEGATIVE Subject Start: 166 Subject End: 475 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgattttcacgtgttggcttaaaggtttatagaaaccttaggaagcttagaaatattaggtgaaaacatttttcttgggtgacaagaacgtgataaatcac-ctcctatctgttcattgcagga-tataaaatttatgtttttgaaatactaaagttgttttcagcatttc......................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgtttcgcattccaaaagcggctgttttgcatggtaaaagcgtaagttttgcattacaaaagagccgctttcgcaacgtcaaatcgaaattattgttttcttaacgaattatctttacaaaatcaaggcgatttccctgtgttggcttgaaggtttataggaaccttaggaagattagaaatattaggtgaagacatttttctttggtgttaggaacgtgttaaaccacacccctatctg-tcattg-agcagtatagagtttatgtctttgcaatgctaaatttgttttcagcatttc......................................................................................................................................................................................................... Subject: pint_PI1577_PI1578|conserved hypothetical protein:rod shape-determining protein|POSITIVE:POSITIVE|[1503940,1504327]|388 HSP 1 e-value: 5.0E-47 bit: 190.0 Len: 144 Query Start:316 Query End:459 Subject Strand: NEGATIVE Subject Start: 72 Subject End: 215 ...........................................................................................................................................................................................................................................................................................................................atcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttaca........................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................atcatcaatgtgttataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaacgtcaaatcgaaattatagttttcttaatgaattatctttaca........................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 8.0E-43 bit: 176.0 Len: 161 Query Start:332 Query End:492 Subject Strand: NEGATIVE Subject Start: 183 Subject End: 345 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacg-aattatctttacaaaaccaaagcgatttt--cacgtgttggcttaaag.......................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttt-tcagcgaaattatctttacaaaaccgaggcgattttcccacgtgttggctgaaag.......................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1803_PI1804|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1737852,1738248]|397 HSP 1 e-value: 3.0E-42 bit: 174.0 Len: 132 Query Start:332 Query End:463 Subject Strand: NEGATIVE Subject Start: 265 Subject End: 396 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattgtaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaatgccaaatcgaaattaccgttttctttcggaataatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 3.0E-42 bit: 174.0 Len: 136 Query Start:328 Query End:463 Subject Strand: NEGATIVE Subject Start: 9 Subject End: 144 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccactttcgcaacgtcaaatcgaaattatcatttttcttcggaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 150 Query Start:319 Query End:468 Subject Strand: POSITIVE Subject Start: 28 Subject End: 177 ..............................................................................................................................................................................................................................................................................................................................atcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. ..............................................................................................................................................................................................................................................................................................................................atcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttt-tcatcagaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0694_PI0695|Na+/dicarboxylate or sulfate symporter:xanthine/uracil permease family protein|POSITIVE:POSITIVE|[631238,631552]|315 HSP 1 e-value: 8.0E-40 bit: 167.0 Len: 136 Query Start:331 Query End:466 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 219 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaa.................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcagtgtcaaatcgaaattaccgttttccgtcggaattatctttacaaaaccaa.................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 3.0E-39 bit: 165.0 Len: 138 Query Start:327 Query End:464 Subject Strand: POSITIVE Subject Start: 106 Subject End: 243 ......................................................................................................................................................................................................................................................................................................................................gttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaacc...................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................gttataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaacgtcaaagcgcagttatcgcttt-ttaacggaattatttttacaaaacc...................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 2.0E-37 bit: 159.0 Len: 136 Query Start:328 Query End:463 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 247 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaatcgaaattaccatttttcaaagaaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270 HSP 1 e-value: 2.0E-37 bit: 159.0 Len: 132 Query Start:331 Query End:462 Subject Strand: POSITIVE Subject Start: 87 Subject End: 218 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaatcgaaattaccattttctaaagaaataatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 3.0E-36 bit: 155.0 Len: 110 Query Start:314 Query End:423 Subject Strand: NEGATIVE Subject Start: 98 Subject End: 207 .........................................................................................................................................................................................................................................................................................................................taatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................................................................................................................................taattatcaatgtgttacaaaacctattgttttgcattctaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 5.0E-35 bit: 151.0 Len: 132 Query Start:331 Query End:462 Subject Strand: POSITIVE Subject Start: 304 Subject End: 435 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaacgtcaaagcgcagttatcactttttaagagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 7.0E-34 bit: 147.0 Len: 138 Query Start:331 Query End:468 Subject Strand: NEGATIVE Subject Start: 85 Subject End: 222 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcactccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgttttcgcaatgtcaaatcgaaattattactttttaaagaaattatctttacaaaagcaaag.................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 3.0E-33 bit: 145.0 Len: 136 Query Start:328 Query End:463 Subject Strand: NEGATIVE Subject Start: 49 Subject End: 184 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttatcacttt-ttaacggaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 1.0E-32 bit: 143.0 Len: 112 Query Start:328 Query End:439 Subject Strand: POSITIVE Subject Start: 383 Subject End: 494 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgtttt............................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttt............................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 1.0E-32 bit: 143.0 Len: 200 Query Start:274 Query End:473 Subject Strand: NEGATIVE Subject Start: 174 Subject End: 373 .................................................................................................................................................................................................................................................................................tgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgatt............................................................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................................................................................................................................................tgtaaatatttttcacaacaatacctatcgcataacaaactaatcatcaacgccttacaaaacctattgtttcgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcacaaaagagccgctttcgcaacgccaaagcgcagttatcaatttttaagagaattatctttacaaaaacaaagggatt............................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386 HSP 1 e-value: 5.0E-32 bit: 141.0 Len: 107 Query Start:317 Query End:423 Subject Strand: NEGATIVE Subject Start: 253 Subject End: 359 ............................................................................................................................................................................................................................................................................................................................tcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................tcatcagtgtattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcatcgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 2.0E-31 bit: 139.0 Len: 150 Query Start:274 Query End:423 Subject Strand: NEGATIVE Subject Start: 187 Subject End: 336 .................................................................................................................................................................................................................................................................................tgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................tgtaaatattttttacaggcataattatcgcataacactctatacgtcagtatgttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 7.0E-31 bit: 137.0 Len: 140 Query Start:327 Query End:466 Subject Strand: POSITIVE Subject Start: 406 Subject End: 545 ......................................................................................................................................................................................................................................................................................................................................gttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacg-aattatctttacaaaaccaa.................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................gttacaaaacctattgttttgcattccaaaagcggctgttttgcacggcaaaagcgtaggttttacctcgcaaaacagccgctttcgcaacgtcaaaacgaaattatcaattt-tcaatgtaattatctttacaaaaccaa.................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 7.0E-31 bit: 137.0 Len: 140 Query Start:324 Query End:463 Subject Strand: NEGATIVE Subject Start: 113 Subject End: 252 ...................................................................................................................................................................................................................................................................................................................................tgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................tgcgttgcaaaacctattgttttgcattccaaaagcggctgttttgcacgctaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcgcttt-ttaacagaataatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 4.0E-29 bit: 131.0 Len: 149 Query Start:313 Query End:461 Subject Strand: NEGATIVE Subject Start: 200 Subject End: 348 ........................................................................................................................................................................................................................................................................................................................ctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................ctaatcatcagagagttataaaacctattgttttgcgttccaaaaacggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcacttt-ttaacggaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 4.0E-29 bit: 131.0 Len: 133 Query Start:331 Query End:463 Subject Strand: POSITIVE Subject Start: 97 Subject End: 229 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgtcaaaacgcagttatcagttt-ttaacagaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 4.0E-29 bit: 131.0 Len: 149 Query Start:312 Query End:460 Subject Strand: NEGATIVE Subject Start: 170 Subject End: 318 .......................................................................................................................................................................................................................................................................................................................cctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaa.......................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................cctaaccatcagcgcattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaatgcaaaagagccgctttcgcaatgccaaagcgcagttatcacttt-ttaacggaattatctttacaa.......................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 7.0E-28 bit: 127.0 Len: 131 Query Start:332 Query End:462 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 241 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcagttt-ttaacagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 7.0E-28 bit: 127.0 Len: 135 Query Start:328 Query End:462 Subject Strand: POSITIVE Subject Start: 91 Subject End: 225 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcatcgtaaaagagccgctttcgcaacgtcaaagcgcagttatcagttt-ttaacagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 7.0E-28 bit: 127.0 Len: 136 Query Start:328 Query End:463 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 280 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcattttttaagagaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 7.0E-28 bit: 127.0 Len: 148 Query Start:314 Query End:461 Subject Strand: POSITIVE Subject Start: 237 Subject End: 384 .........................................................................................................................................................................................................................................................................................................................taatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................................................................................................................................................................................................................................................taatcatcagtgtgttacaaaacctattgttttgcgttccaaaagtggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcactttttaagagaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 3.0E-27 bit: 125.0 Len: 135 Query Start:328 Query End:462 Subject Strand: POSITIVE Subject Start: 148 Subject End: 282 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttacgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 3.0E-27 bit: 125.0 Len: 134 Query Start:328 Query End:461 Subject Strand: NEGATIVE Subject Start: 480 Subject End: 613 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcggctgttttgcatggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgccaaagcgcagttatcacttt-ttaacagaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 1.0E-26 bit: 123.0 Len: 134 Query Start:328 Query End:461 Subject Strand: NEGATIVE Subject Start: 310 Subject End: 443 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaagacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaaagaaattatctttacaaa......................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 2.0E-25 bit: 119.0 Len: 148 Query Start:328 Query End:475 Subject Strand: POSITIVE Subject Start: 53 Subject End: 200 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaagcgatttt........................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgctgcaaaacagccgctttcgcaacgccaaatcgaaattaccgtttttcgtcggaattatctttacaaaacgaaagagatttt........................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 2.0E-25 bit: 119.0 Len: 136 Query Start:328 Query End:463 Subject Strand: NEGATIVE Subject Start: 165 Subject End: 300 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaacagccgctttcgcaatgtcaaaacgcagttatcaatttttaagagaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 3.0E-24 bit: 115.0 Len: 138 Query Start:331 Query End:468 Subject Strand: NEGATIVE Subject Start: 135 Subject End: 272 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattgtaaaagcgtaggttttacacggtcaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaattatcattttccttacgaattatccttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 3.0E-24 bit: 115.0 Len: 133 Query Start:331 Query End:463 Subject Strand: POSITIVE Subject Start: 96 Subject End: 228 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaatgccaaagcgcagttatcagttt-ttaacagaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0195_PI0196|epimerase/reductase:hypothetical protein|POSITIVE:POSITIVE|[188263,188574]|312 HSP 1 e-value: 4.0E-23 bit: 111.0 Len: 132 Query Start:328 Query End:459 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 279 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttaca........................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaattgtcattttctctacgaattatttttaca........................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1728_PI1729|ATP-dependent Clp protease, proteolytic subunit:FKBP-type peptidyl-prolyl cis-trans isomerase, trigger factor|POSITIVE:POSITIVE|[1647719,1648555]|837 HSP 1 e-value: 3.0E-21 bit: 105.0 Len: 145 Query Start:319 Query End:463 Subject Strand: POSITIVE Subject Start: 403 Subject End: 547 ..............................................................................................................................................................................................................................................................................................................................atcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................atcagtgtgttataaaacctattgtttcgcattgtaaaagagccgcttttgcacggtaaaagcggctcttttgccttgcaaaacctacgcttttgcaacgtcaaatcgaaattaccgttttctcaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 3.0E-21 bit: 105.0 Len: 133 Query Start:331 Query End:463 Subject Strand: POSITIVE Subject Start: 106 Subject End: 238 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcgtaggttttacacggcaaaagcggctgttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcttacgaataatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1688_PI1689|possible GTPase:conserved hypothetical protein|POSITIVE:POSITIVE|[1603964,1604449]|486 HSP 1 e-value: 2.0E-19 bit: 99.6 Len: 142 Query Start:327 Query End:468 Subject Strand: POSITIVE Subject Start: 169 Subject End: 310 ......................................................................................................................................................................................................................................................................................................................................gttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................................................................................................................................................................................gttataaaacctattgttttgcattgtaaaagcgtaggttttgcacggtaaaagcggctcttttgcatcgcaaaacatacgctttcgcaacgtcaaatcgaaattatcattttccctccgaattatctttacaaaatcaaag.................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1915_PI1916|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1859967,1860350]|384 HSP 1 e-value: 6.0E-19 bit: 97.6 Len: 147 Query Start:332 Query End:478 Subject Strand: NEGATIVE Subject Start: 98 Subject End: 244 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcatagg-ttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgtttt-cttaacgaattatctttacaaaaccaaagcgattttcac........................................................................................................................................................................................................................................................................................................................................................................ ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcaacgtaaaa-catacgcttttaccgtgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttcgtca-gaattatttttacaaaatcaaggcgattttcac........................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 9.0E-12 bit: 73.8 Len: 57 Query Start:355 Query End:411 Subject Strand: POSITIVE Subject Start: 165 Subject End: 221 ..................................................................................................................................................................................................................................................................................................................................................................aaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgcttt........................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................aaagcggctgttttgcacggtaaaagcgtatgttttacgttgcaaaacagccgcttt........................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 6.0E-19 bit: 97.6 Len: 137 Query Start:332 Query End:468 Subject Strand: POSITIVE Subject Start: 233 Subject End: 368 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt-tcaatgaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 6.0E-16 bit: 87.7 Len: 108 Query Start:332 Query End:439 Subject Strand: NEGATIVE Subject Start: 764 Subject End: 871 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgtttt............................................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgttgcaaaacctacgctttcgcaacgccaaatcgaaattatcatttt............................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 131 Query Start:332 Query End:462 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 271 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaagagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 151 Query Start:273 Query End:423 Subject Strand: NEGATIVE Subject Start: 150 Subject End: 300 ................................................................................................................................................................................................................................................................................ctgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................ctgtaaatatttttcacaagagtacctatcgtataactacctcatcatcagtgtgttataaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggttgttttgcatcgtaaaacagctgcttttgcaatgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1441_PI1442|hypothetical protein:radical-activating enzyme (pyruvate-formate lyase-activating enzyme)|POSITIVE:POSITIVE|[1363734,1364088]|355 HSP 1 e-value: 9.0E-15 bit: 83.8 Len: 138 Query Start:328 Query End:465 Subject Strand: POSITIVE Subject Start: 82 Subject End: 219 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaacca..................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgctttcgcaacgtcaaatcgaaaataccgttttccttgtaaattatctttacaaaacca..................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 4.0E-14 bit: 81.8 Len: 57 Query Start:407 Query End:463 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 199 ......................................................................................................................................................................................................................................................................................................................................................................................................................gctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................gctttcgcaatgtcaaatcgaaattatcattttttcaacgaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-8 bit: 61.9 Len: 51 Query Start:331 Query End:381 Subject Strand: NEGATIVE Subject Start: 225 Subject End: 275 ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagc......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagc......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 8.0E-6 bit: 54.0 Len: 35 Query Start:377 Query End:411 Subject Strand: POSITIVE Subject Start: 195 Subject End: 229 ........................................................................................................................................................................................................................................................................................................................................................................................aaagcataggttttgcgttgcaaaagagctgcttt........................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................aaagcgtaggttttgcgttgcaaaagagccgcttt........................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 4.0E-14 bit: 81.8 Len: 141 Query Start:328 Query End:468 Subject Strand: NEGATIVE Subject Start: 195 Subject End: 334 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgcaaac-agccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaaccaaag.................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 150 Query Start:274 Query End:423 Subject Strand: NEGATIVE Subject Start: 226 Subject End: 375 .................................................................................................................................................................................................................................................................................tgtaaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................tgtaaatatttttcacaagggaaactattgcataactatctatacatcaatgtattacaaaacctattgttttgcattccaaaagcgtaggttttacacgataaaagcggctgttttgcgttgcaaaacagccactttcgcaatgtcaaa............................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0652_PI0653|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[595853,596185]|333 HSP 1 e-value: 9.0E-12 bit: 73.8 Len: 85 Query Start:276 Query End:360 Subject Strand: NEGATIVE Subject Start: 249 Subject End: 333 ...................................................................................................................................................................................................................................................................................taaatatttttcacaagaaaaattttcgcataacagcctaatcatcagtgcgttacaaaacctattgttttgcatcctaaaagcg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................................................................................taaatatttttcacaacaataactttcacctaacaatctcatcatcagcgcattacaaaacctattgttttgcattccaaaagcg.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 8.0E-6 bit: 54.0 Len: 58 Query Start:420 Query End:477 Subject Strand: NEGATIVE Subject Start: 132 Subject End: 189 ...................................................................................................................................................................................................................................................................................................................................................................................................................................caaatcgaaattatcgtttt-cttaacgaattatctttacaaaaccaaagcgattttca......................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................caaatcgaaattatcgtttttcttca-gaattatctttacaaaacaagaacgattttca......................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1981_PI1982|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1938199,1938578]|380 HSP 1 e-value: 2.0E-9 bit: 65.9 Len: 132 Query Start:332 Query End:463 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 274 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgaaatgcaaaacagccgctttcgcaatgtcaaaccgaaattgctgtttt-ttatcagaattatctttacaaaac....................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 2.0E-9 bit: 65.9 Len: 148 Query Start:328 Query End:475 Subject Strand: NEGATIVE Subject Start: 66 Subject End: 213 .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacg-aattatctttacaaaaccaaagcgatttt........................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcatcgcaaaacagccgctttcgcaatgccaaagcgcaattaccacttt-tcaacgaaattatctttacaaaagcaaagctatttt........................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1958_PI1959|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1917430,1917847]|418 HSP 1 e-value: 9.0E-9 bit: 63.9 Len: 100 Query Start:332 Query End:431 Subject Strand: NEGATIVE Subject Start: 213 Subject End: 312 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaatt....................................................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgcaatgcaaaacagccgcttttgcaatgtcaaaccgaaatt....................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 5.0E-7 bit: 58.0 Len: 140 Query Start:332 Query End:471 Subject Strand: POSITIVE Subject Start: 179 Subject End: 318 ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaac-gaattatctttacaaaaccaaagcga............................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaacgtcaaagcgcagttgtcacttt-ttaacggaattatctttacaaagccgaagcga............................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAACUUACGUACCACUUAACUAUCUAUGAUUAGUUAUUAAUUUAUUUAAUUGCUGAUGUUUGAGUAAGAGGGUGUCCAAAAAGCGUUUUUGGUUCACCCUCUUAUUAUUUUGUUUCUAUUGUUGUUUGUUUUAAUUAUUAUUGGUAGUGACAGCAGUAAGUCAUUCGGAAAUAGCAGUAUAAUGUAAUCCUUGGUGAACAGAAAGAGCCUUUUACGAACAAUGUUGCUUUUACUAAAUACUGUGUUUUAUGCAUAGAGAAAAGGCUAAAAUACUGUAAAUAUUUUUCACAAGAAAAAUUUUCGCAUAACAGCCUAAUCAUCAGUGCGUUACAAAACCUAUUGUUUUGCAUCCUAAAAGCGGCUGUUUUGCACGGUAAAAGCAUAGGUUUUGCGUUGCAAAAGAGCUGCUUUCGCAACGUCAAAUCGAAAUUAUCGUUUUCUUAACGAAUUAUCUUUACAAAACCAAAGCGAUUUUCACGUGUUGGCUUAAAGGUUUAUAGAAACCUUAGGAAGCUUAGAAAUAUUAGGUGAAAACAUUUUUCUUGGGUGACAAGAACGUGAUAAAUCACCUCCUAUCUGUUCAUUGCAGGAUAUAAAAUUUAUGUUUUUGAAAUACUAAAGUUGUUUUCAGCAUUUCGUAUAAGCAGCUAAGUAGAAGUUGUUCCCUGAAAGAAGAUUCUAUCGAAGAAGGGCAAAAACGAAAUAAUCCCACAGUCCAAAGGGUAUGAGGACUGUGGGAUUAUUGAUUUUUAGAUACUGUAAGGCUAUUUUGAUGAGGUAAUCUUUUUCGCCUUCAGAUGUUAUUCAACUUUUUUAAAGAGAUGUUUUUUCCGUCUUA ..((((((....................((((((.(((((.....))))).)))))).....((((((((((((.((((((.....))))))..)))))))))))).............(((((((....(((((....)))))....)))))))))))))....((((((.((((..........((((((((((((((((..(((((...((((........((((((((((...(((.((((((((.((...........)))))))))).)))...(((((((....)))))))....(((.(((((((.........(((((..((((......))))..))))).........))))))).)))..))))))))))..(((((((((((((.((((.....)))).))))))..............(((((.....)))))..........))))))).............))))..)))))..((((((....))))))(((((....((....))...(((((...(((..((((((.....)))))).))).....))))))))))))))))))))).)))))............((((((((.((((..((((((((...((.....))..)))))))).))))(((((((..((((....((........)).....)))).(((((...((((((((((((((((...........))))))))))))))))..))))).(((((((.(((((......(((......)))......)))))))).))))...)))))))))))))))..)))).))))))..... (-230.07) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGACGGAAAAAACAUCUCUUUAAAAAAGUUGAAUAACAUCUGAAGGCGAAAAAGAUUACCUCAUCAAAAUAGCCUUACAGUAUCUAAAAAUCAAUAAUCCCACAGUCCUCAUACCCUUUGGACUGUGGGAUUAUUUCGUUUUUGCCCUUCUUCGAUAGAAUCUUCUUUCAGGGAACAACUUCUACUUAGCUGCUUAUACGAAAUGCUGAAAACAACUUUAGUAUUUCAAAAACAUAAAUUUUAUAUCCUGCAAUGAACAGAUAGGAGGUGAUUUAUCACGUUCUUGUCACCCAAGAAAAAUGUUUUCACCUAAUAUUUCUAAGCUUCCUAAGGUUUCUAUAAACCUUUAAGCCAACACGUGAAAAUCGCUUUGGUUUUGUAAAGAUAAUUCGUUAAGAAAACGAUAAUUUCGAUUUGACGUUGCGAAAGCAGCUCUUUUGCAACGCAAAACCUAUGCUUUUACCGUGCAAAACAGCCGCUUUUAGGAUGCAAAACAAUAGGUUUUGUAACGCACUGAUGAUUAGGCUGUUAUGCGAAAAUUUUUCUUGUGAAAAAUAUUUACAGUAUUUUAGCCUUUUCUCUAUGCAUAAAACACAGUAUUUAGUAAAAGCAACAUUGUUCGUAAAAGGCUCUUUCUGUUCACCAAGGAUUACAUUAUACUGCUAUUUCCGAAUGACUUACUGCUGUCACUACCAAUAAUAAUUAAAACAAACAACAAUAGAAACAAAAUAAUAAGAGGGUGAACCAAAAACGCUUUUUGGACACCCUCUUACUCAAACAUCAGCAAUUAAAUAAAUUAAUAACUAAUCAUAGAUAGUUAAGUGGUACGUAAGUUA .....((((((................((((((........((((((((......(((......)))......))))).)))....(((((((.((((((((((((((((...........))))))))))))))))..)))))))....(((..((.(((....))).))..))).)))))).....((((.........(((((((((((......))))))))))).................(((((....((((((((.((((((((((((.(((((((((((.....))))).(((((((.......)))))))....((((...(((((((....))))))).))))....)))))))))))))...(((((((....((....(((((.....))))).....)).......(((((((((((.....))))))))))))))))))....(((((((...((......)).(((((((...((((((((.....))))))))..(((..((.((..((((((..((((.((((((((((....))))))).)))...))))..))))))..))))..)))..................)))))))..........))))))).)))))))))))))...)))))...........))))))))))..((((((((.(.(..((((.........................................((((((((((..((((((.....)))))).))))))))))............................((((((........))))))))))..)))))))))) (-221.00) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 854 410 361 79 30 pint:PI2022|5end_hypothetical_protein_1978631..1978861_POSITIVE 854 410 361 171 122 pint:PI1804|5end_hypothetical_protein_1738109..1738339_POSITIVE 854 410 361 58 9 pint:PI1786|5end_hypothetical_protein_1718124..1718354_POSITIVE 834 410 361 212 163 pint:PI2046|5end_hypothetical_protein_1999030..1999260_POSITIVE 816 400 352 229 181 pint:PI1333|5end_conserved_hypothetical_protein_1250777..1251007_POSITIVE 816 400 352 202 154 pint:PI0024|5end_hypothetical_protein_28378..28608_POSITIVE 796 400 352 65 17 pint:PI1204|5end_hypothetical_protein_1124430..1124660_POSITIVE 796 410 361 226 177 pint:PI0575|5end_hypothetical_protein_519561..519791_POSITIVE 782 410 361 226 177 pint:PI0827|5end_hypothetical_protein_763991..764221_POSITIVE 780 410 361 119 70 pint:PI0978|5end_hypothetical_protein_904867..905097_POSITIVE 779 410 361 79 30 pint:PI0322|5end_hypothetical_protein_303508..303738_POSITIVE 776 380 331 196 147 pint:PI0887|5end_hypothetical_protein_817536..817766_POSITIVE 776 380 331 89 40 pint:PI0867|5end_hypothetical_protein_803859..804089_POSITIVE 764 410 361 206 157 pint:PI0991|5end_conserved_hypothetical_protein_915309..915539_POSITIVE 757 380 331 89 40 pint:PI0119|5end_hypothetical_protein_111506..111736_POSITIVE 745 410 361 60 11 pint:PI0568|5end_hypothetical_protein_512950..513180_POSITIVE 739 380 331 222 173 pint:PI2024|5end_hypothetical_protein_1978804..1979034_POSITIVE 738 450 401 119 70 pint:PI0037|5end_hypothetical_protein_39354..39584_POSITIVE 707 400 352 50 2 pint:PI0089|5end_hypothetical_protein_88162..88392_POSITIVE 696 420 371 216 167 pint:PI1437|5end_hypothetical_protein_1356088..1356318_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 852 400 352 151 103 pint:PI0081|3end_hypothetical_protein_80700..80850_POSITIVE 816 400 352 151 103 pint:PI0095|3end_hypothetical_protein_91850..92000_POSITIVE 796 400 352 151 103 pint:PI0815|3end_hypothetical_protein_754677..754827_POSITIVE 787 430 383 49 2 pint:PI0574|3end_hypothetical_protein_519444..519594_POSITIVE 776 380 331 143 94 pint:PI1797|3end_hypothetical_protein_1731559..1731709_POSITIVE 776 380 331 143 94 pint:PI0885|3end_hypothetical_protein_817563..817713_POSITIVE 776 380 331 143 94 pint:PI0866|3end_hypothetical_protein_803993..804143_POSITIVE 776 380 331 143 94 pint:PI0820|3end_hypothetical_protein_759980..760130_POSITIVE 776 380 331 82 33 pint:PI0819|3end_hypothetical_protein_759919..760069_POSITIVE 776 380 331 143 94 pint:PI0089|3end_hypothetical_protein_88355..88505_POSITIVE 757 380 331 143 94 pint:PI0118|3end_hypothetical_protein_111640..111790_POSITIVE 745 410 361 85 36 pint:PI0567|3end_hypothetical_protein_513055..513205_POSITIVE 739 380 331 131 82 pint:PI0568|3end_hypothetical_protein_513131..513281_POSITIVE 735 380 331 143 94 pint:PI1041|3end_hypothetical_protein_960675..960825_POSITIVE 725 370 321 133 84 pint:PI1005|3end_hypothetical_protein_926481..926631_POSITIVE 720 400 352 151 103 pint:PI0638|3end_hypothetical_protein_582402..582552_POSITIVE 720 400 352 146 98 pint:PI0637|3end_hypothetical_protein_582397..582547_POSITIVE 707 400 352 151 103 pint:PI1252|3end_hypothetical_protein_1175440..1175590_POSITIVE 666 400 352 151 103 pint:PI1155|3end_hypothetical_protein_1080352..1080502_POSITIVE 640 380 331 82 33 pint:PI0560|3end_hypothetical_protein_508910..509060_POSITIVE