Origin IGS: taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 atacgttgtaaacggaacaaatgtgttctaaaacttctttttgtttactatttttgctgaataatcatcaatttgttgtttattcaatcttttatcgttacctttgcagtgcaatttggttcgcaacagcgattaatagggaattaggtgagaaacctaaacagtccagctgctgtaagttgtcattgtagacacaaacatataccactgagcaaagggcttgggaaggggtttgtggtcagacaataagtcagaatacctgccattgctatacttctataaggcttctatgggataggttgagaagtagaataattgaagtttaaataagattagacattgccagtttttagtatttgcttatggctgatacaagaaaactgtagtttttggctatgtgcgagagtgcaatctgccaataactaaacaggaaactataaacaagaggaattaaatttttatattaacaaattatatttatgaacacaaaactactattggtgtcgttatcaatggcgctgtcggctatctctatgcctttaatggcgcagggaacgcctacggaagtcaatatttcggacaccaaacaaacgattactgttggagacaatagtatcaacttctatgatgagggtggacctacggggccaacaacgcctcgagttggtgaagataaacgagttagcgaaattacattcgtgccagaaaaccctgctaaaaaggttatggctaatttcactaagatggacatcttcctctcttctttaggagaaaagaacagtcaattcgtaaaggtttacagcggaaaagaagcaaagaaggataacttgctgaaatcttttacaaggaatgaaaaaggtattgttaagtctattgccgacgatggtgcacttacaatagtattcgaaaacgattatgcgatgacaaaaccaggctgggaggctactgtttctcagtttacaccgcaacaaatgacagtaagcggcttcgatgtgaagcagtttagcgaaggaacagtatgtgccgacgataaaggacagcagattctcagctttaatattaaggcttcagaaactttaaatgcactcaaaacgcagaagttcagctttaatactaacggcacacaagcacaagtaacacacgctacactttactttacaaaagcatcaagtgctttcgagagtcctaagaaaataggcgaagtagatattaatggcaatgatgcgtttgagattacggctactgatgctgctgaactcagagaaggcgacaactggttctggctgacttacgacatcagcgaaatggctgaaaatggtcagaagatagatgcggcacttacaaatgttaagttaagtaatacagactatgaggtaaaagacggcagtcctgatgacaatagagttgtaaagaacgaaattcttttcaatgaaggcaaagaagtgagaaagataaatggttcgtttatctttaaatcaagaactacaagctatacaggcaagcaagctggaagtaagaacgaccatattataactttccttcctattcatgcgaaccacattattcagattaacttcaagtcatttgacgaatattattctaagaataacactggcgcaagaaccaggttcgtaatttatagtggcgaagatacaaatggcgatgtgctgtgggaactgaaatcggcagaccaagcaagtaagggtcctggacatctcttgcgttctaaggcggaaaatggtgccatcactgtgttgatgaaccctaatgctgaattttcaaacgaattgggcaaaggcttcgaggcagaagtaagcgaatacgaaagcaagcctatcgtatttaaggaagctgttgtaaaacaactctctaacgatgttgcagcagcaggtgctaccgatttggacattatcagcttcaacgttaaggcggaaggcgataagggtgcgctcaactta Mask Tandem Repeat Region ================================================ taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Find is-nt database================================================ Query_seq: PI1790:PI1792|PI1790:PI1792:hypothetical protein:hypothetical protein:->->:1722823..1724780 1958 taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI1790:PI1792|PI1790:PI1792:hypothetical protein:hypothetical protein:->->:1722823..1724780 1958 taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI1790:PI1792|PI1790:PI1792:hypothetical protein:hypothetical protein:->->:1722823..1724780 1958 taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Predict ORF larger than 30AA ================================================ Protein_Len: 53 Strand: + Start: 19 End: 177 .................. M A F R L N V E A D N V Q I G S T C C C N I V R E L F Y N S F L K Y D R L A F V F A Y F C L E A F A Q F V ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 5 End: 319 .... M S A P L S P S A L T L K L I M S K S V A P A A A T S L E S C F T T A S L N T I G L L S Y S L T S A S K P L P N S F E N ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: + Start: 261 End: 356 .................................................................................................................................................................................................................................................................... M L G L P I S V P T A H R H L Y L R H Y K L R T W F L R Q C Y S .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 190 End: 375 ............................................................................................................................................................................................. M R V H Q H S D G T I F R L R T Q E M S R T L T C L V C R F Q F P Q H I A I C I F A T I N Y E P G S C A S V I L R I I F ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 30 Strand: + Start: 391 End: 480 ...................................................................................................................................................................................................................................................................................................................................................................................................... M N N V V R M N R K E S Y N M V V L T S S L L A C I A C S S ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 33 Strand: + Start: 491 End: 589 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N E P F I F L T S L P S L K R I S F F T T L L S S G L P S F T S ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: + Start: 502 End: 603 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Y L S H F F A F I E K N F V L Y N S I V I R T A V F Y L I V C I T ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 59 Strand: + Start: 613 End: 789 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M C K C R I Y L L T I F S H F A D V V S Q P E P V V A F S E F S S I S S R N L K R I I A I N I Y F A Y F L R T L E S T ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 40 Strand: + Start: 686 End: 805 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M S P S L S S A A S V A V I S N A S L P L I S T S P I F L G L S K A L D A F V K ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 56 Strand: + Start: 836 End: 1003 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M P L V L K L N F C V L S A F K V S E A L I L K L R I C C P L S S A H T V P S L N C F T S K P L T V I C C G V N ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 33 Strand: + Start: 1061 End: 1159 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M V S A P S S A I D L T I P F S F L V K D F S K L S F F A S F P L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 901 End: 1191 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M K A E N L L S F I V G T Y C S F A K L L H I E A A Y C H L L R C K L R N S S L P A W F C H R I I V F E Y Y C K C T I V ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: + Start: 1122 End: 1217 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M S A S Y P S L L L F R C K P L R I D C S F L L K K R G R C P S ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 52 Strand: + Start: 1178 End: 1333 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M F F S P K E E R K M S I L V K L A I T F L A G F S G T N V I S L T R L S S P T R G V V G P V G P P S S ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 1225 End: 1416 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M S H N L F S R V F W H E C N F A N S F I F T N S R R C W P R R S T L I I E V D T I V S N S N R L F G V R N I D F R R R .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 51 Strand: + Start: 1340 End: 1492 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M I L L S P T V I V C L V S E I L T S V G V P C A I K G I E I A D S A I D N D T N S S F V F I N I I C .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 33 Strand: + Start: 1508 End: 1606 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M P L V Y S F L F S Y W Q I A L S H I A K N Y S F L V S A I S K Y ................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 36 Strand: + Start: 1751 End: 1858 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M V Y V C V Y N D N L Q Q L D C L G F S P N S L L I A V A N Q I A L Q R .................................................................................................... Protein_Len: 33 Strand: + Start: 1830 End: 1928 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M L R T K L H C K G N D K R L N K Q Q I D D Y S A K I V N K K K F .............................. Protein_Len: 56 Strand: - Start: 1771 End: 1938 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L S L K C C S S Q K P K E G L E R N I A T A F W I A S C L Y R Y F I S Y V V F Q H N N L L F L L C F S T K S C M .................... Protein_Len: 33 Strand: - Start: 1713 End: 1811 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Q R V V F G K G L G K S L P I H K H R C H C S V A A P S N L N R M ................................................................................................................................................... Protein_Len: 52 Strand: - Start: 1349 End: 1504 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q R W C Y D N T Q H G F Y Q S G Y A N G A G N F A Y L Y G V A G N I V V G I T T K H E Y I Y N T L I F M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1194 End: 1388 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... T W R L S I L W L R K L L T K Q C S H L K A L E N I K V L E L R Q Q G R L D V R M M S T S V I T E L L L R K N P T R F M .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: - Start: 956 End: 1057 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... V A E C R L R K S D N T A T Y V S F C Y G G L R T K D D C L R K R M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1 End: 1488 P G T P G G E D Y F N I S N D G V T I T Q K T D S I N V E T P T G Q A M L P M S I A S L A M S L S V L L L K T N M F I M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 83 Start: 739 End: 768 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCATTAATATCTACTTCGCCTATTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... PromScan Matrix: RpoD-17 Strand: + Score: 82 Start: 403 End: 432 ..................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCATGAATAGGAAGGAAAGTTATAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 52 HP_score: -4.0 Tail_Score: -3.54307 Start: 118 End: 138 Full_Region: gcagaagtaagcgaa tacgaaag caagc ctatcgta tttaaggaagctgtt .....................................................................................................................tacgaaagcaagcctatcgta............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 48 HP_score: -4.0 Tail_Score: -3.25356 Start: 118 End: 138 Full_Region: AACAGCTTCCTTAAA TACGATAG GCTTG CTTTCGTA TTCGCTTACTTCTGC .....................................................................................................................TACGATAGGCTTGCTTTCGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 41 HP_score: -2.6 Tail_Score: -2.73338 Start: 1101 End: 1121 Full_Region: TAGACTTAACAATAC CTTTTTCA TTCCT TGTAAAAG ATTTCAGCAAGTTAT ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTCATTCCTTGTAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 41 HP_score: -2.6 Tail_Score: -2.65586 Start: 1101 End: 1121 Full_Region: ataacttgctgaaat cttttaca aggaa tgaaaaag gtattgttaagtcta ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttttacaaggaatgaaaaag..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: PI1790:PI1792|PI1790:PI1792:hypothetical protein:hypothetical protein:->->:1722823..1724780 1958 taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Intra-Species Hit: Count: 1 Min: 1 Max: 1958 Len: 1958 Subject: pint_PI1790_PI1792|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1722823,1724780]|1958 HSP 1 e-value: 0.0 bit: 3881.0 Len: 1958 Query Start:1 Query End:1958 Subject Strand: POSITIVE Subject Start: 1 Subject End: 1958 taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat taagttgagcgcacccttatcgccttccgccttaacgttgaagctgataatgtccaaatcggtagcacctgctgctgcaacatcgttagagagttgttttacaacagcttccttaaatacgataggcttgctttcgtattcgcttacttctgcctcgaagcctttgcccaattcgtttgaaaattcagcattagggttcatcaacacagtgatggcaccattttccgccttagaacgcaagagatgtccaggacccttacttgcttggtctgccgatttcagttcccacagcacatcgccatttgtatcttcgccactataaattacgaacctggttcttgcgccagtgttattcttagaataatattcgtcaaatgacttgaagttaatctgaataatgtggttcgcatgaataggaaggaaagttataatatggtcgttcttacttccagcttgcttgcctgtatagcttgtagttcttgatttaaagataaacgaaccatttatctttctcacttctttgccttcattgaaaagaatttcgttctttacaactctattgtcatcaggactgccgtcttttacctcatagtctgtattacttaacttaacatttgtaagtgccgcatctatcttctgaccattttcagccatttcgctgatgtcgtaagtcagccagaaccagttgtcgccttctctgagttcagcagcatcagtagccgtaatctcaaacgcatcattgccattaatatctacttcgcctattttcttaggactctcgaaagcacttgatgcttttgtaaagtaaagtgtagcgtgtgttacttgtgcttgtgtgccgttagtattaaagctgaacttctgcgttttgagtgcatttaaagtttctgaagccttaatattaaagctgagaatctgctgtcctttatcgtcggcacatactgttccttcgctaaactgcttcacatcgaagccgcttactgtcatttgttgcggtgtaaactgagaaacagtagcctcccagcctggttttgtcatcgcataatcgttttcgaatactattgtaagtgcaccatcgtcggcaatagacttaacaatacctttttcattccttgtaaaagatttcagcaagttatccttctttgcttcttttccgctgtaaacctttacgaattgactgttcttttctcctaaagaagagaggaagatgtccatcttagtgaaattagccataacctttttagcagggttttctggcacgaatgtaatttcgctaactcgtttatcttcaccaactcgaggcgttgttggccccgtaggtccaccctcatcatagaagttgatactattgtctccaacagtaatcgtttgtttggtgtccgaaatattgacttccgtaggcgttccctgcgccattaaaggcatagagatagccgacagcgccattgataacgacaccaatagtagttttgtgttcataaatataatttgttaatataaaaatttaattcctcttgtttatagtttcctgtttagttattggcagattgcactctcgcacatagccaaaaactacagttttcttgtatcagccataagcaaatactaaaaactggcaatgtctaatcttatttaaacttcaattattctacttctcaacctatcccatagaagccttatagaagtatagcaatggcaggtattctgacttattgtctgaccacaaaccccttcccaagccctttgctcagtggtatatgtttgtgtctacaatgacaacttacagcagctggactgtttaggtttctcacctaattccctattaatcgctgttgcgaaccaaattgcactgcaaaggtaacgataaaagattgaataaacaacaaattgatgattattcagcaaaaatagtaaacaaaaagaagttttagaacacatttgttccgtttacaacgtat Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGUUGAGCGCACCCUUAUCGCCUUCCGCCUUAACGUUGAAGCUGAUAAUGUCCAAAUCGGUAGCACCUGCUGCUGCAACAUCGUUAGAGAGUUGUUUUACAACAGCUUCCUUAAAUACGAUAGGCUUGCUUUCGUAUUCGCUUACUUCUGCCUCGAAGCCUUUGCCCAAUUCGUUUGAAAAUUCAGCAUUAGGGUUCAUCAACACAGUGAUGGCACCAUUUUCCGCCUUAGAACGCAAGAGAUGUCCAGGACCCUUACUUGCUUGGUCUGCCGAUUUCAGUUCCCACAGCACAUCGCCAUUUGUAUCUUCGCCACUAUAAAUUACGAACCUGGUUCUUGCGCCAGUGUUAUUCUUAGAAUAAUAUUCGUCAAAUGACUUGAAGUUAAUCUGAAUAAUGUGGUUCGCAUGAAUAGGAAGGAAAGUUAUAAUAUGGUCGUUCUUACUUCCAGCUUGCUUGCCUGUAUAGCUUGUAGUUCUUGAUUUAAAGAUAAACGAACCAUUUAUCUUUCUCACUUCUUUGCCUUCAUUGAAAAGAAUUUCGUUCUUUACAACUCUAUUGUCAUCAGGACUGCCGUCUUUUACCUCAUAGUCUGUAUUACUUAACUUAACAUUUGUAAGUGCCGCAUCUAUCUUCUGACCAUUUUCAGCCAUUUCGCUGAUGUCGUAAGUCAGCCAGAACCAGUUGUCGCCUUCUCUGAGUUCAGCAGCAUCAGUAGCCGUAAUCUCAAACGCAUCAUUGCCAUUAAUAUCUACUUCGCCUAUUUUCUUAGGACUCUCGAAAGCACUUGAUGCUUUUGUAAAGUAAAGUGUAGCGUGUGUUACUUGUGCUUGUGUGCCGUUAGUAUUAAAGCUGAACUUCUGCGUUUUGAGUGCAUUUAAAGUUUCUGAAGCCUUAAUAUUAAAGCUGAGAAUCUGCUGUCCUUUAUCGUCGGCACAUACUGUUCCUUCGCUAAACUGCUUCACAUCGAAGCCGCUUACUGUCAUUUGUUGCGGUGUAAACUGAGAAACAGUAGCCUCCCAGCCUGGUUUUGUCAUCGCAUAAUCGUUUUCGAAUACUAUUGUAAGUGCACCAUCGUCGGCAAUAGACUUAACAAUACCUUUUUCAUUCCUUGUAAAAGAUUUCAGCAAGUUAUCCUUCUUUGCUUCUUUUCCGCUGUAAACCUUUACGAAUUGACUGUUCUUUUCUCCUAAAGAAGAGAGGAAGAUGUCCAUCUUAGUGAAAUUAGCCAUAACCUUUUUAGCAGGGUUUUCUGGCACGAAUGUAAUUUCGCUAACUCGUUUAUCUUCACCAACUCGAGGCGUUGUUGGCCCCGUAGGUCCACCCUCAUCAUAGAAGUUGAUACUAUUGUCUCCAACAGUAAUCGUUUGUUUGGUGUCCGAAAUAUUGACUUCCGUAGGCGUUCCCUGCGCCAUUAAAGGCAUAGAGAUAGCCGACAGCGCCAUUGAUAACGACACCAAUAGUAGUUUUGUGUUCAUAAAUAUAAUUUGUUAAUAUAAAAAUUUAAUUCCUCUUGUUUAUAGUUUCCUGUUUAGUUAUUGGCAGAUUGCACUCUCGCACAUAGCCAAAAACUACAGUUUUCUUGUAUCAGCCAUAAGCAAAUACUAAAAACUGGCAAUGUCUAAUCUUAUUUAAACUUCAAUUAUUCUACUUCUCAACCUAUCCCAUAGAAGCCUUAUAGAAGUAUAGCAAUGGCAGGUAUUCUGACUUAUUGUCUGACCACAAACCCCUUCCCAAGCCCUUUGCUCAGUGGUAUAUGUUUGUGUCUACAAUGACAACUUACAGCAGCUGGACUGUUUAGGUUUCUCACCUAAUUCCCUAUUAAUCGCUGUUGCGAACCAAAUUGCACUGCAAAGGUAACGAUAAAAGAUUGAAUAAACAACAAAUUGAUGAUUAUUCAGCAAAAAUAGUAAACAAAAAGAAGUUUUAGAACACAUUUGUUCCGUUUACAACGUAU ...((((...(((...((((((.((((.((......)).)))).)))))).(((.....(((((((....)))))))....(((((.((..(((((((....)))))))..)).....))))).))).)))....((.(((....((((((...(((..((((((((.(((.((((((((..........(((((((((((((......))))))...........)))))))..((((((((....(((((.........(((((((.(((.......)))...))).))))..(((..(((((((..........)))))))..))).)))))))))))))..((((((((((...))))))))))..)))))))).))).............((((.(((((((((....((((((.((..((......))..)).))))))..(((((((.((((((((((...(((.((((((((((((..(((((((((.......)))))))))..................(((.(((((((...))))))).))).......))))..)))))))).(((((((((.....(((((((........(((((.(....))))))(((((.........(((((.....(((((......)))))........))))).((((((((((((..(((..(...(((..((((((..(((((................(((.(((.((((.((((((((((....((((......))))(((..((((((((.....))))))))...))).....))))...))))))..)).))..))))))..((((((((((.(((((((((.((((.......))))....))))))....))).)))))))))).)))))....))))))..)))....)..)))...(((((((.(((.((......))...........(((((..((........)).))))).......))).)))))))......))).))))))))).....((((..(((....))).(((....))).))))......).)))).))))))).......................)))))))))...)))..(((((.(((((..((((((.....(((((((((......(((((((((((((((((((.....)))))))).(((((((..(...((((((((((((((((.((((((......))))))...)))).......))))))))))))...)..)))))))......((((((((((((((((...(((((...(((((....(..(((((..(((.....(.(.(((((((.......))).)))).).).....)))..)))))..)))).))..)))))(((......))).........)))))))))))).))))...........)))))..(((((((((.((((((...)))))).)))))))))...)))))).....))))))))).....((((((((.(((((....(((......)))....))))).)))..(((((((...((((..((.....))..))))..)))))))..................)))))...............................)))))).....))))).)))))....))))))).......(((((((..(((.((((((.....(((.(((.....)))..).)).....))))))))).)))))))........))))))))))....((((((.....))))))..................))))))))).))))....))))))))..))).....(.((((((((.((.(.....).)).))))))))).................))))))....))).))..............)))).... (-489.42) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUACGUUGUAAACGGAACAAAUGUGUUCUAAAACUUCUUUUUGUUUACUAUUUUUGCUGAAUAAUCAUCAAUUUGUUGUUUAUUCAAUCUUUUAUCGUUACCUUUGCAGUGCAAUUUGGUUCGCAACAGCGAUUAAUAGGGAAUUAGGUGAGAAACCUAAACAGUCCAGCUGCUGUAAGUUGUCAUUGUAGACACAAACAUAUACCACUGAGCAAAGGGCUUGGGAAGGGGUUUGUGGUCAGACAAUAAGUCAGAAUACCUGCCAUUGCUAUACUUCUAUAAGGCUUCUAUGGGAUAGGUUGAGAAGUAGAAUAAUUGAAGUUUAAAUAAGAUUAGACAUUGCCAGUUUUUAGUAUUUGCUUAUGGCUGAUACAAGAAAACUGUAGUUUUUGGCUAUGUGCGAGAGUGCAAUCUGCCAAUAACUAAACAGGAAACUAUAAACAAGAGGAAUUAAAUUUUUAUAUUAACAAAUUAUAUUUAUGAACACAAAACUACUAUUGGUGUCGUUAUCAAUGGCGCUGUCGGCUAUCUCUAUGCCUUUAAUGGCGCAGGGAACGCCUACGGAAGUCAAUAUUUCGGACACCAAACAAACGAUUACUGUUGGAGACAAUAGUAUCAACUUCUAUGAUGAGGGUGGACCUACGGGGCCAACAACGCCUCGAGUUGGUGAAGAUAAACGAGUUAGCGAAAUUACAUUCGUGCCAGAAAACCCUGCUAAAAAGGUUAUGGCUAAUUUCACUAAGAUGGACAUCUUCCUCUCUUCUUUAGGAGAAAAGAACAGUCAAUUCGUAAAGGUUUACAGCGGAAAAGAAGCAAAGAAGGAUAACUUGCUGAAAUCUUUUACAAGGAAUGAAAAAGGUAUUGUUAAGUCUAUUGCCGACGAUGGUGCACUUACAAUAGUAUUCGAAAACGAUUAUGCGAUGACAAAACCAGGCUGGGAGGCUACUGUUUCUCAGUUUACACCGCAACAAAUGACAGUAAGCGGCUUCGAUGUGAAGCAGUUUAGCGAAGGAACAGUAUGUGCCGACGAUAAAGGACAGCAGAUUCUCAGCUUUAAUAUUAAGGCUUCAGAAACUUUAAAUGCACUCAAAACGCAGAAGUUCAGCUUUAAUACUAACGGCACACAAGCACAAGUAACACACGCUACACUUUACUUUACAAAAGCAUCAAGUGCUUUCGAGAGUCCUAAGAAAAUAGGCGAAGUAGAUAUUAAUGGCAAUGAUGCGUUUGAGAUUACGGCUACUGAUGCUGCUGAACUCAGAGAAGGCGACAACUGGUUCUGGCUGACUUACGACAUCAGCGAAAUGGCUGAAAAUGGUCAGAAGAUAGAUGCGGCACUUACAAAUGUUAAGUUAAGUAAUACAGACUAUGAGGUAAAAGACGGCAGUCCUGAUGACAAUAGAGUUGUAAAGAACGAAAUUCUUUUCAAUGAAGGCAAAGAAGUGAGAAAGAUAAAUGGUUCGUUUAUCUUUAAAUCAAGAACUACAAGCUAUACAGGCAAGCAAGCUGGAAGUAAGAACGACCAUAUUAUAACUUUCCUUCCUAUUCAUGCGAACCACAUUAUUCAGAUUAACUUCAAGUCAUUUGACGAAUAUUAUUCUAAGAAUAACACUGGCGCAAGAACCAGGUUCGUAAUUUAUAGUGGCGAAGAUACAAAUGGCGAUGUGCUGUGGGAACUGAAAUCGGCAGACCAAGCAAGUAAGGGUCCUGGACAUCUCUUGCGUUCUAAGGCGGAAAAUGGUGCCAUCACUGUGUUGAUGAACCCUAAUGCUGAAUUUUCAAACGAAUUGGGCAAAGGCUUCGAGGCAGAAGUAAGCGAAUACGAAAGCAAGCCUAUCGUAUUUAAGGAAGCUGUUGUAAAACAACUCUCUAACGAUGUUGCAGCAGCAGGUGCUACCGAUUUGGACAUUAUCAGCUUCAACGUUAAGGCGGAAGGCGAUAAGGGUGCGCUCAACUUA ...(((..((..((.......(((((((((((..(((((((((((((.....(((.(((........((((((..((((((.((((((((....((((..(((((((((((...(((((((..(((..((((((.(((((((.((((((.....))))))....))).....)))).))))))..)))..))).)))).......))))..)))))))((((.(((((.(((..((((.(((.................))))))).)))...)))))...))))....))))...))))))))))))))...)))))).((((((......)))))).....((((((((.(((((.((.....)).)))))..))))))))(((((.(((((..((..(....)..))....))))).)))))..))).)))...)))))))))))))...(((......)))...........)))).))))))).........((((((((........((((.((((.(((..(((((.((((......)))).)))))..))).))))..))))........)))))))).....))..((((((((....))))))))........))..))).(((((.((((.....(((.....(((((..(((((.(((((((((((((.((((.(((((((.......((((...((((.(......).)))).))))))))))).)))).......(((((.(((.(((((((..............((((....((((((((((.((((((......................))))))))))).)))))............(((.(((((...((((.(((((....(((((....((((....(((((((....)))..))))..(((((.....((((((((((((....))))))))))))...(((((.(......((((...((.((((..(((((((.(((.(((((...........(((((((............(((.(.....).)))....((((((((((...(((.((((...(((.........))))))))))))))))))))....)))))))...((....))......))))).)))...)))))))...((((((..((((((((.....((((......))))))))............)))).)))))).((((((.(((((((.......)))).))).)))))))))).))...))))..(((..((((((.......(((((......)))))....)))))).)))..).)))))..........)))))......)))).....)))))..))))).)))).))))))))..))))......((((.((((((.....)))))).))))......))))))).))).))))).......)))))))))))))...............(((.....)))....(((((((..((((((....((((.((.((.((((((...((((...((((((((...(((((((((.(((......(((....))).....))).)))..))))))....(((....)..)).))))))))....)))).)).)))).)).)))))).(((((.(...(((..((...((..((.......))..)).))..))).).)))))))))))..((((((.(((....(((..((....((((.((((.....(((..((((.(((((......))))).)))).)))..)))).))))........((((((((.((.....)).))))))))......(((((((((..(((....((....)))))))))))))).))..)))))).)))))).....))))))))))).)..)))))...))).....)))).)))))...... (-532.58) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 395 169 121 100 40 pint:PI2100|5end_conserved_hypothetical_protein_2053351..2053581_POSITIVE 387 68 23 91 42 pint:PI0530|5end_possible_membrane-fusion_protein_483772..484002_POSITIVE 384 169 125 224 173 pint:PI1205|5end_hypothetical_protein_1127047..1127277_POSITIVE 384 169 125 154 103 pint:PI1207|5end_hypothtical_protein_1126977..1127207_POSITIVE 380 1320 1272 134 79 pint:PI0785|5end_hypothetical_protein_723744..723974_POSITIVE 379 979 931 154 97 pint:PI1575|5end_LemA_protein_1501143..1501373_POSITIVE 375 970 922 74 32 pint:PI1628|5end_hypothetical_protein_1551082..1551312_POSITIVE 371 1763 1730 117 84 pint:PI1104|5end_GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-redu_ctase_1027749..1027979_POSITIVE 370 1000 952 150 103 pint:PI0088|5end_S-adenosylmethionine_synthetase_86663..86893_POSITIVE 369 1698 1651 103 58 pint:PI0303|5end_hypothetical_protein_286946..287176_POSITIVE 366 1345 1301 74 29 pint:PI1651|5end_hypothetical_protein_1563845..1564075_POSITIVE 363 1053 1011 100 55 pint:PI0915|5end_hypothetical_protein_845183..845413_POSITIVE 357 715 682 52 18 pint:PI0810|5end_hypothetical_protein_746743..746973_POSITIVE 357 715 682 47 13 pint:PI0811|5end_protease/hemagglutinin_PrtT,_streptopain_family_746738..746968_POSITIVE 353 947 907 181 129 pint:PI1630|5end_hypothetical_protein_1552127..1552357_POSITIVE 353 1019 973 106 50 pint:PI0736|5end_transcriptional_regulator,_TetR_family_670580..670810_POSITIVE 351 689 644 182 136 pint:PI0427|5end_conserved_hypothetical_protein_391140..391370_POSITIVE 349 978 931 221 172 pint:PI1928|5end_conserved_hypothetical_protein_1871996..1872226_POSITIVE 349 1320 1273 197 134 pint:PI0817|5end_glycosyl_transferase,_group_1_family_protein_756861..757091_POSITIVE 348 170 124 225 158 pint:PI0580|5end_Holliday_junction_DNA_helicase_524178..524408_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 375 970 922 69 27 pint:PI1627|3end_hypothetical_protein_1551157..1551307_POSITIVE 370 1000 952 140 93 pint:PI0087|3end_conserved_hypothetical_protein_86733..86883_POSITIVE 369 1698 1651 96 51 pint:PI0302|3end_hypothetical_protein_287019..287169_POSITIVE 366 1345 1301 50 5 pint:PI1650|3end_N-acetylmuramoyl-L-alanine_amidase_1563901..1564051_POSITIVE 356 170 124 42 2 pint:PI2036|3end_hypothetical_protein_1989516..1989666_POSITIVE 352 700 651 118 62 pint:PI1651|3end_hypothetical_protein_1564512..1564662_POSITIVE 343 994 951 146 99 pint:PI1574|3end_conserved_hypothetical_protein_1501226..1501376_POSITIVE 337 1019 973 84 38 pint:PI1636|3end_hypothetical_protein_1554823..1554973_POSITIVE 334 1054 1015 123 80 pint:PI1715|3end_conserved_hypothetical_protein;_possible_DNA-binding_protein,_histone-like_family_1632324..1632474_POSITIVE 332 954 922 149 109 pint:PI1979|3end_conserved_hypothetical_protein_1937327..1937477_POSITIVE 332 165 126 106 74 pint:PI0818|3end_alpha-amylase_759659..759809_POSITIVE 329 480 432 143 89 pint:PI1558|3end_conserved_hypothetical_protein_1476106..1476256_POSITIVE 328 998 951 61 10 pint:PI1943|3end_hypothetical_protein_1902206..1902356_POSITIVE 328 998 960 103 64 pint:PI0356|3end_hypothetical_protein_327288..327438_POSITIVE 326 683 648 102 68 pint:PI0953|3end_hypothetical_protein_885390..885540_POSITIVE 326 691 655 140 105 pint:PI0160|3end_conserved_hypothetical_protein_153268..153418_POSITIVE 324 96 53 80 28 pint:PI2016|3end_ribosomal_large_subunit_pseudouridine_synthase_D_1974933..1975083_POSITIVE 323 1320 1273 136 87 pint:PI1547|3end_hypothetical_protein_1466226..1466376_POSITIVE 323 1326 1297 141 104 pint:PI0651|3end_HD_superfamily_hydrolase_592895..593045_POSITIVE 320 314 272 97 51 pint:PI1818|3end_hypothetical_protein_1757270..1757420_POSITIVE