Origin IGS: taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtgataacctcacggcaggacttgacaaaagcaagatgagtgttgagcagctcttaggagcagctcgacgtgcttcgctctttatcaatgctaagatcaacgaccagcataaggtaattgatagtgtcaatactgaccttgaccgtatgcagcgtaagttgcagactatgaaaccagggacaggacaacaagaactgtttacggaaattagtgcttgcaagaaagtacttgccgaagagatgggtgtgcttgaggggttggaaaaagaatatcagcaggcacggcagggcgtcagtcaattggagcaggaatataagaaaatatctgtatcagaagagcaagcagcagctgccagcaaatcgctcaccgaaaagatagctgagcagaagagtgtcatcaagcaggtggaggctgacgtgaaggctctacagaaagcttatgagtccgcagcacctggcaaagcacaaaatgaagtagcagccgatttgaatgcagccaaacaagccttagaagaagaaaagggaattctaaatagcctgacagaagcacagaatcgcaacaaggaaagcaatcaacgattgtcgcgtcaactacgtgagctgcaaaacgacatggcacgtatgcgtctgaacggcgagcagaataccgaagagtaccagaagatggcacaaaaggcagctgagctctccgacaccttaggagacttgcgtgcacagacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taatgcaagaagttccttggcaagctgctcagcttcttttgtcccgtctttctttttcttttttttctttttgttttttgtaggtgctgcatgcccaccaatattattcttctttccaatatttgcagcttgctttgttaaatcagctgcgttctttagattattgtcgcgctcagcctctaattctttggtccgtttatcatgagccttcttgttactatcttttataatcttacgagaatcaatgattccattagatgtagcagaaccaaaactcaataaggccttcttaaaccaccccatagatgtatctgcattatctgggttagtggctttgtgtttagctaatttttcgtcagcttctacagccttattcaccagtgcctgtgccttagcttgcagaaagagcatctgtatatattgttctgctttttgtgtcagaacatcataccactttgctacagagtcataatatccgaaggcttcaccgtacttacggttcatttcctcgcacttctgcttttcttcttccttcgtaccactgaaattcctgagactctcacggatagtatcaatttcgaatcgagtcttaatcatctcggctctgccctgagattcaatttctacacgttcttgtgctttcttcgcagcttcttcctgagcatctgaaagtttattccaagctacaattacacctgtaataactacagataatccaagagtaagagttgccataagtgcagttgcagcagcattagatatacctaacgatgttgcaagccgataattagcagctgcaaggaactcctttgcttttgtaagcgttacaaggcggaaggcactatccttgttaagagtattaaacacctgctgcaagcccatggtgatagccatgacactctgcacgcgagcttgtatctttgcgagattctcgttctctgatgcgaataacgacattacacctgtagctgtggtgaatgcaccagacagaccattaactcccgagatgaagccctgaaggttcgcatcgtcattagcgagaatacttgtctgtgcacgcaagtctcctaaggtgtcggagagctcagctgccttttgtgccatcttctggtactcttcggtattctgctcgccgttcagacgcatacgtgccatgtcgttttgcagctcacgtagttgacgcgacaatcgttgattgctttccttgttgcgattctgtgcttctgtcaggctatttagaattcccttttcttcttctaaggcttgtttggctgcattcaaatcggctgctacttcattttgtgctttgccaggtgctgcggactcataagctttctgtagagccttcacgtcagcctccacctgcttgatgacactcttctgctcagctatcttttcggtgagcgatttgctggcagctgctgcttgctcttctgatacagatattttcttatattcctgctccaattgactgacgccctgccgtgcctgctgatattctttttccaacccctcaagcacacccatctcttcggcaagtactttcttgcaagcactaatttccgtaaacagttcttgttgtcctgtccctggtttcatagtctgcaacttacgctgcatacggtcaaggtcagtattgacactatcaattaccttatgctggtcgttgatcttagcattgataaagagcgaagcacgtcgagctgctcctaagagctgctcaacactcatcttgcttttgtcaagtcctgccgtgaggttatcacgcataaggaattctatctctactggtttcattgtcttattggtttaaattactttgaaaaaagcctactatatcctcagcttcctcctcttcagtctgatctttcttttgttcacggctatcaacataacgtggtgcatcactcagcatcatgataagtgtctgaaaatttacgccattcagaatgtagtccacgctccatcccgtagcgctggctatttgccagataaatccgaaagggctatgggagctttcccaatggctcttta Mask Tandem Repeat Region ================================================ taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtgataacctcacggcaggacttgacaaaagcaagatgagtgttgagcagctcttaggagcagctcgacgtgcttcgctctttatcaatgctaagatcaacgaccagcataaggtaattgatagtgtcaatactgaccttgaccgtatgcagcgtaagttgcagactatgaaaccagggacaggacaacaagaactgtttacggaaattagtgcttgcaagaaagtacttgccgaagagatgggtgtgcttgaggggttggaaaaagaatatcagcaggcacggcagggcgtcagtcaattggagcaggaatataagaaaatatctgtatcagaagagcaagcagcagctgccagcaaatcgctcaccgaaaagatagctgagcagaagagtgtcatcaagcaggtggaggctgacgtgaaggctctacagaaagcttatgagtccgcagcacctggcaaagcacaaaatgaagtagcagccgatttgaatgcagccaaacaagccttagaagaagaaaagggaattctaaatagcctgacagaagcacagaatcgcaacaaggaaagcaatcaacgattgtcgcgtcaactacgtgagctgcaaaacgacatggcacgtatgcgtctgaacggcgagcagaataccgaagagtaccagaagatggcacaaaaggcagctgagctctccgacaccttaggagacttgcgtgcacagacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Find is-nt database================================================ Query_seq: PI1653:PI1654|PI1653:PI1654:hypothetical protein:hypothetical protein:->->:1565775..1567808 2034 taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtgataacctcacggcaggacttgacaaaagcaagatgagtgttgagcagctcttaggagcagctcgacgtgcttcgctctttatcaatgctaagatcaacgaccagcataaggtaattgatagtgtcaatactgaccttgaccgtatgcagcgtaagttgcagactatgaaaccagggacaggacaacaagaactgtttacggaaattagtgcttgcaagaaagtacttgccgaagagatgggtgtgcttgaggggttggaaaaagaatatcagcaggcacggcagggcgtcagtcaattggagcaggaatataagaaaatatctgtatcagaagagcaagcagcagctgccagcaaatcgctcaccgaaaagatagctgagcagaagagtgtcatcaagcaggtggaggctgacgtgaaggctctacagaaagcttatgagtccgcagcacctggcaaagcacaaaatgaagtagcagccgatttgaatgcagccaaacaagccttagaagaagaaaagggaattctaaatagcctgacagaagcacagaatcgcaacaaggaaagcaatcaacgattgtcgcgtcaactacgtgagctgcaaaacgacatggcacgtatgcgtctgaacggcgagcagaataccgaagagtaccagaagatggcacaaaaggcagctgagctctccgacaccttaggagacttgcgtgcacagacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI1653:PI1654|PI1653:PI1654:hypothetical protein:hypothetical protein:->->:1565775..1567808 2034 taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtgataacctcacggcaggacttgacaaaagcaagatgagtgttgagcagctcttaggagcagctcgacgtgcttcgctctttatcaatgctaagatcaacgaccagcataaggtaattgatagtgtcaatactgaccttgaccgtatgcagcgtaagttgcagactatgaaaccagggacaggacaacaagaactgtttacggaaattagtgcttgcaagaaagtacttgccgaagagatgggtgtgcttgaggggttggaaaaagaatatcagcaggcacggcagggcgtcagtcaattggagcaggaatataagaaaatatctgtatcagaagagcaagcagcagctgccagcaaatcgctcaccgaaaagatagctgagcagaagagtgtcatcaagcaggtggaggctgacgtgaaggctctacagaaagcttatgagtccgcagcacctggcaaagcacaaaatgaagtagcagccgatttgaatgcagccaaacaagccttagaagaagaaaagggaattctaaatagcctgacagaagcacagaatcgcaacaaggaaagcaatcaacgattgtcgcgtcaactacgtgagctgcaaaacgacatggcacgtatgcgtctgaacggcgagcagaataccgaagagtaccagaagatggcacaaaaggcagctgagctctccgacaccttaggagacttgcgtgcacagacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 271 Max: 984 Len: 714 Subject: gi|7305095|ref|NP_038775.1| golgi autoantigen, golgin subfamily a, 5 [Mus musculus] HSP 1 e-value: 1.0E-6 bit: 52.0 Len: 714 Query Start:271 Query End:984 Subject Strand: null Subject Start: 275 Subject End: 500 .............................................................................................................................................................................................................................................................................. D N L T A G L D K S K M S V E Q L L G A A R R A S L F I N A K I N D Q H K V I D S V N T D L D R M Q - - - - R K L Q T M K P G T G Q Q E L F T E I S A C K K V L A E E M G V L E G L E K E Y Q Q A R Q G V S Q L E Q E Y K K I S V S E E Q A A A A S K S L T E K I A E Q K S V I K Q V E A D V K A L Q K A Y E S A A P G K A Q N E V A A D L N A A K Q A L E E E K G I L N S L T E A Q N - R N K E S N Q R L S R Q L R E L Q N D M A R M R L N G E Q N T E E Y Q K M A Q K A A E L S D T L G D L R A Q .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. D R I T R E L R A Q V D D L T E A V A A K D S Q L A V L K V R L Q E A D Q V L S S R T E A L E A L R S E K S R I M Q D H K E G S S L Q N - - Q A L Q T L Q E R L H E A D A T L K R E Q E S Y K Q M Q - - - S E F A A R L N K M E V D R Q N L A E A V T L A E R K Y S E E K K K V D E L Q Q Q V K L H R A S L E S - - - - - A K Q E L V D Y K Q K A T R I L Q S K E K L I N S L K E G S S F E G L E S S T A S S M E L E E L R H E K - - - - - - - E M Q K E E I Q K L M G Q M H Q L R S E L Q D M E A Q .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Find nr database================================================ Query_seq: PI1653:PI1654|PI1653:PI1654:hypothetical protein:hypothetical protein:->->:1565775..1567808 2034 taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Predict ORF larger than 30AA ================================================ Protein_Len: 30 Strand: + Start: 38 End: 127 ..................................... M Y L A N S Q R Y G M E R G L H S E W R K F S D T Y H D A E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 42 End: 230 ......................................... M W Q I A S A T G W S V D Y I L N G V N F Q T L I M M L S D A P R Y V D S R E Q K K D Q T E E E E A E D I V G F F Q S N ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 55 Strand: + Start: 479 End: 643 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M L A R K Y L P K R W V C L R G W K K N I S R H G R A S V N W S R N I R K Y L Y Q K S K Q Q L P A N R S P K R ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 33 Strand: + Start: 977 End: 1075 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M H R Q V F S L M T M R T F R A S S R E L M V C L V H S P Q L Q V ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: + Start: 1056 End: 1172 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M H H S Y R C N V V I R I R E R E S R K D T S S R A E C H G Y H H G L A A G V .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 34 Strand: + Start: 1106 End: 1207 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M S Q R Y K L A C R V S W L S P W A C S R C L I L L T R I V P S A L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 42 Strand: + Start: 1907 End: 2032 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M Q I L E R R I I L V G M Q H L Q K T K R K K R K R K T G Q K K L S S L P R N F L H .. Protein_Len: 60 Strand: + Start: 238 End: 2034 ............................................................................................................................................................................................................................................. M K P V E I E F L M R D N L T A G L D K S K M S V E Q L L G A A R R A S L F I N A K I N D Q H K V I D S V N T D L D R M Protein_Len: 38 Strand: - Start: 1897 End: 2010 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ C L L S C I N S L L I I N T P M C C R C F V F L F F L F L F V P C F F S L M ........................ Protein_Len: 60 Strand: - Start: 1833 End: 2018 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ R V L S N S A S R S L L R F F A A S K V F C A A F I P F F F L I P P C A A G V F F L F F F F F F F S P V F S A S C S A M ................ Protein_Len: 48 Strand: - Start: 1808 End: 1951 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L L Y Y C S P E H Y V S W L I L P Q A R C Y D L S R L Q N L L A L Q L Y Q F S S Y Y Q H A H L M ................................................................................... Protein_Len: 60 Strand: - Start: 1566 End: 1823 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. A C A S T F L A T S A S S F N A L C L A V L G S L A S V D I P H N L F A K N L K P E A V D L P I M S E R L I I F S L L M ................................................................................................................................................................................................................... Protein_Len: 41 Strand: - Start: 1493 End: 1615 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H Y S P L L F A S T R P F S G Y T R H L R R I N H S Q L L T T H H E S V F L L V M ................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 36 Strand: - Start: 1425 End: 1532 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ P L A S I I L V R N S I S V I R S L R L F K L P V F S S S F C F H S S M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1369 End: 1662 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ P I E T T R L F F F L L L A L F H V T L V T F G E S I I V R Y C L P I I N Q C L F C F L I Y L H E K Q L S L C L C Q H M .................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: - Start: 1251 End: 1346 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. R S A V D N P I D L A A A V A S I A V R V R P N D T T I V P T M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 52 Strand: - Start: 1096 End: 1251 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L V L I E C L Y L S A H L T D H S D G H A Q L L H K I S K V L I T G E A K Y R K C F C L L E K C S S I M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 56 Strand: - Start: 1020 End: 1187 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... P K M E P T L P R D P A N V V A V P T I D N N A D S F S F R A F I C A R T C L T M A I V M P K C C T N L V R L M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 45 Strand: - Start: 858 End: 992 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S R S S C F S M A R I R R F P S C F V S S Y W F I A C F A A S S E S V K P S K R A C V L M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 44 Strand: - Start: 708 End: 839 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S D A A G P L A C F S T A A S K F A A L C A K S S S F P I R F L R V S A C F R L L S L M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 668 End: 988 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L L V S D C C P F C D V I T A D V V H A A F R C P V Y A D S R R A S Y R L T G S S P V F P L Q A R R C R L L S A H V S M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: - Start: 567 End: 668 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... N S C S Y L F I D T D S S C A A A A L L D S V S F I A S C F L T M M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 325 End: 582 .................................................................................................................................................................................................................................................................................................................................... V K V T H L T L Q L S H F W P C S L L F Q K R F N T S A L F Y K G F L H T H K L P Q F F F I L L C P L A D T L Q L L F M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 225 End: 509 ................................................................................................................................................................................................................................ A R R A E S K I L A L I L S W C L T I S L T L V S R S R I C R L N C V I F G P V P C C S S N V S I L A Q L F T S A S S M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 118 End: 318 ..................................................................................................................... N H Q Y G H V F S L D S Q L P P L Q P Y L L S K E F Y N L G I L C H F W Y L Y F E K H T I V E R C S K V F A L H T N L M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 3 End: 221 .. D P L Y G A S R S P A H V V N Q I A Y I K L C K D H H Q T I C W T I N I A T F L L F I L S F L L F S L I Y Y A K K L T M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 74 HP_score: -10.7 Tail_Score: -2.8084 Start: 309 End: 338 Full_Region: CAAAAGCAAGATGAG TGTTGAGCAGCTC TTAG GAGCAGCTCGACG TGCTTCGCTCTTTAT ....................................................................................................................................................................................................................................................................................................................TGTTGAGCAGCTCTTAGGAGCAGCTCGACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 66 HP_score: -4.4 Tail_Score: -4.4017 Start: 1222 End: 1238 Full_Region: cgataattagcagct gcaagg aactc ctttgc ttttgtaagcgttac .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gcaaggaactcctttgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Find igs database================================================ Query_seq: PI1653:PI1654|PI1653:PI1654:hypothetical protein:hypothetical protein:->->:1565775..1567808 2034 taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctacaaaaaacaaaaagaaaaaaaagaaaaagaaagacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Intra-Species Hit: Count: 1 Min: 1 Max: 2034 Len: 2034 Subject: pint_PI1653_PI1654|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1565775,1567808]|2034 HSP 1 e-value: 0.0 bit: 1925.0 Len: 971 Query Start:985 Query End:1955 Subject Strand: POSITIVE Subject Start: 985 Subject End: 1955 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................acaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctac............................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................acaagtattctcgctaatgacgatgcgaaccttcagggcttcatctcgggagttaatggtctgtctggtgcattcaccacagctacaggtgtaatgtcgttattcgcatcagagaacgagaatctcgcaaagatacaagctcgcgtgcagagtgtcatggctatcaccatgggcttgcagcaggtgtttaatactcttaacaaggatagtgccttccgccttgtaacgcttacaaaagcaaaggagttccttgcagctgctaattatcggcttgcaacatcgttaggtatatctaatgctgctgcaactgcacttatggcaactcttactcttggattatctgtagttattacaggtgtaattgtagcttggaataaactttcagatgctcaggaagaagctgcgaagaaagcacaagaacgtgtagaaattgaatctcagggcagagccgagatgattaagactcgattcgaaattgatactatccgtgagagtctcaggaatttcagtggtacgaaggaagaagaaaagcagaagtgcgaggaaatgaaccgtaagtacggtgaagccttcggatattatgactctgtagcaaagtggtatgatgttctgacacaaaaagcagaacaatatatacagatgctctttctgcaagctaaggcacaggcactggtgaataaggctgtagaagctgacgaaaaattagctaaacacaaagccactaacccagataatgcagatacatctatggggtggtttaagaaggccttattgagttttggttctgctacatctaatggaatcattgattctcgtaagattataaaagatagtaacaagaaggctcatgataaacggaccaaagaattagaggctgagcgcgacaataatctaaagaacgcagctgatttaacaaagcaagctgcaaatattggaaagaagaataatattggtgggcatgcagcacctac............................................................................... HSP 2 e-value: 1.0E-150 bit: 535.0 Len: 270 Query Start:1 Query End:270 Subject Strand: POSITIVE Subject Start: 1 Subject End: 270 taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgt.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taaagagccattgggaaagctcccatagccctttcggatttatctggcaaatagccagcgctacgggatggagcgtggactacattctgaatggcgtaaattttcagacacttatcatgatgctgagtgatgcaccacgttatgttgatagccgtgaacaaaagaaagatcagactgaagaggaggaagctgaggatatagtaggcttttttcaaagtaatttaaaccaataagacaatgaaaccagtagagatagaattccttatgcgt.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 6.0E-18 bit: 95.6 Len: 48 Query Start:1987 Query End:2034 Subject Strand: POSITIVE Subject Start: 1987 Subject End: 2034 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gacgggacaaaagaagctgagcagcttgccaaggaacttcttgcatta Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAAGAGCCAUUGGGAAAGCUCCCAUAGCCCUUUCGGAUUUAUCUGGCAAAUAGCCAGCGCUACGGGAUGGAGCGUGGACUACAUUCUGAAUGGCGUAAAUUUUCAGACACUUAUCAUGAUGCUGAGUGAUGCACCACGUUAUGUUGAUAGCCGUGAACAAAAGAAAGAUCAGACUGAAGAGGAGGAAGCUGAGGAUAUAGUAGGCUUUUUUCAAAGUAAUUUAAACCAAUAAGACAAUGAAACCAGUAGAGAUAGAAUUCCUUAUGCGUGAUAACCUCACGGCAGGACUUGACAAAAGCAAGAUGAGUGUUGAGCAGCUCUUAGGAGCAGCUCGACGUGCUUCGCUCUUUAUCAAUGCUAAGAUCAACGACCAGCAUAAGGUAAUUGAUAGUGUCAAUACUGACCUUGACCGUAUGCAGCGUAAGUUGCAGACUAUGAAACCAGGGACAGGACAACAAGAACUGUUUACGGAAAUUAGUGCUUGCAAGAAAGUACUUGCCGAAGAGAUGGGUGUGCUUGAGGGGUUGGAAAAAGAAUAUCAGCAGGCACGGCAGGGCGUCAGUCAAUUGGAGCAGGAAUAUAAGAAAAUAUCUGUAUCAGAAGAGCAAGCAGCAGCUGCCAGCAAAUCGCUCACCGAAAAGAUAGCUGAGCAGAAGAGUGUCAUCAAGCAGGUGGAGGCUGACGUGAAGGCUCUACAGAAAGCUUAUGAGUCCGCAGCACCUGGCAAAGCACAAAAUGAAGUAGCAGCCGAUUUGAAUGCAGCCAAACAAGCCUUAGAAGAAGAAAAGGGAAUUCUAAAUAGCCUGACAGAAGCACAGAAUCGCAACAAGGAAAGCAAUCAACGAUUGUCGCGUCAACUACGUGAGCUGCAAAACGACAUGGCACGUAUGCGUCUGAACGGCGAGCAGAAUACCGAAGAGUACCAGAAGAUGGCACAAAAGGCAGCUGAGCUCUCCGACACCUUAGGAGACUUGCGUGCACAGACAAGUAUUCUCGCUAAUGACGAUGCGAACCUUCAGGGCUUCAUCUCGGGAGUUAAUGGUCUGUCUGGUGCAUUCACCACAGCUACAGGUGUAAUGUCGUUAUUCGCAUCAGAGAACGAGAAUCUCGCAAAGAUACAAGCUCGCGUGCAGAGUGUCAUGGCUAUCACCAUGGGCUUGCAGCAGGUGUUUAAUACUCUUAACAAGGAUAGUGCCUUCCGCCUUGUAACGCUUACAAAAGCAAAGGAGUUCCUUGCAGCUGCUAAUUAUCGGCUUGCAACAUCGUUAGGUAUAUCUAAUGCUGCUGCAACUGCACUUAUGGCAACUCUUACUCUUGGAUUAUCUGUAGUUAUUACAGGUGUAAUUGUAGCUUGGAAUAAACUUUCAGAUGCUCAGGAAGAAGCUGCGAAGAAAGCACAAGAACGUGUAGAAAUUGAAUCUCAGGGCAGAGCCGAGAUGAUUAAGACUCGAUUCGAAAUUGAUACUAUCCGUGAGAGUCUCAGGAAUUUCAGUGGUACGAAGGAAGAAGAAAAGCAGAAGUGCGAGGAAAUGAACCGUAAGUACGGUGAAGCCUUCGGAUAUUAUGACUCUGUAGCAAAGUGGUAUGAUGUUCUGACACAAAAAGCAGAACAAUAUAUACAGAUGCUCUUUCUGCAAGCUAAGGCACAGGCACUGGUGAAUAAGGCUGUAGAAGCUGACGAAAAAUUAGCUAAACACAAAGCCACUAACCCAGAUAAUGCAGAUACAUCUAUGGGGUGGUUUAAGAAGGCCUUAUUGAGUUUUGGUUCUGCUACAUCUAAUGGAAUCAUUGAUUCUCGUAAGAUUAUAAAAGAUAGUAACAAGAAGGCUCAUGAUAAACGGACCAAAGAAUUAGAGGCUGAGCGCGACAAUAAUCUAAAGAACGCAGCUGAUUUAACAAAGCAAGCUGCAAAUAUUGGAAAGAAGAAUAAUAUUGGUGGGCAUGCAGCACCUACAAAAAACAAAAAGAAAAAAAAGAAAAAGAAAGACGGGACAAAAGAAGCUGAGCAGCUUGCCAAGGAACUUCUUGCAUUA ......((((((.((((.(...((((.(((((..((.......(((((.....))))).....))..).)).))))))....).)))).))))))......................((((((.(((((..(((((....((((.((((((((((((...........(((..((((....((((((((((............)))))))))).......((((......))))..........)))).(((((....(((((.(((((.((((((..((..((.(((((...((.((((..(((((..(((((((.((((....)))).))))))).(((((.(((((((.....((((...(((((..(((.......)))..))))).....((((((((((((((.((...((((((....))))))..........(((.((((((..(.....)..)))))).(((.....(((((((......)))))))..)))......)))..(((((((...(((............)))..))))))))))))))..)))))..)))).)))).((.((((.((.....)))))))).))))))))))))....((((((((..(((............))).)))).)))).......)))))......((((((.((.......)).)))))).....)))).))))))))).(((((((.....((((........)).)).((.(...((((((((.(((.(((..((.(((((.............))))).....(((((..(((((...((((((((.........((((((...))))))..(((((....(((.((.((((..(((........))).)))).))..)))...((((((((((......((.(((.....))).)).....(((((.(((.(((((.........)))))))))).)))........))))))).)))..))))).)))))...)))...)))))...))))).......))..))).)))))))))))...).))..)))))))..))..))))))))))).)).))).....))))).....)))....((((.......)))).)))))))))))).)))).((.....)).)))))....)))))...((((((...(......)..))))))...((((....)))).((((((((((((((((((((......((((((((((.((.(((((((....))))))).)).)))..((((((....(....)......(((((...(((((((((...)))))))))...(((((((((........(((((.(.....).))))))))))))))........)))))..))))))..................)))))))...(((((....(((((.....))))).......((((..((((((...(((((...((((.((((((..........(((....)))..........(((((....)))))....))))))..((((((((......((((.....(((((.(((((((.(.......)))))))).))))).....))))((((((....((((.((((.((.((..(.(.(((((((((.....((((((.......)))))).......(((((((...((((....(((......)))...))))))))))).....))))))))).).)..)).)).))))..((((.((((((((...))))).))).)))).........))))....)))))).)))))))).....))))..))))).))))))...))))....)))))........)))))))..........(((((((((.(((((((..........))))))).(((((.........)))))...................................................)))))))))))))))))))))))))))) (-584.02) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAUGCAAGAAGUUCCUUGGCAAGCUGCUCAGCUUCUUUUGUCCCGUCUUUCUUUUUCUUUUUUUUCUUUUUGUUUUUUGUAGGUGCUGCAUGCCCACCAAUAUUAUUCUUCUUUCCAAUAUUUGCAGCUUGCUUUGUUAAAUCAGCUGCGUUCUUUAGAUUAUUGUCGCGCUCAGCCUCUAAUUCUUUGGUCCGUUUAUCAUGAGCCUUCUUGUUACUAUCUUUUAUAAUCUUACGAGAAUCAAUGAUUCCAUUAGAUGUAGCAGAACCAAAACUCAAUAAGGCCUUCUUAAACCACCCCAUAGAUGUAUCUGCAUUAUCUGGGUUAGUGGCUUUGUGUUUAGCUAAUUUUUCGUCAGCUUCUACAGCCUUAUUCACCAGUGCCUGUGCCUUAGCUUGCAGAAAGAGCAUCUGUAUAUAUUGUUCUGCUUUUUGUGUCAGAACAUCAUACCACUUUGCUACAGAGUCAUAAUAUCCGAAGGCUUCACCGUACUUACGGUUCAUUUCCUCGCACUUCUGCUUUUCUUCUUCCUUCGUACCACUGAAAUUCCUGAGACUCUCACGGAUAGUAUCAAUUUCGAAUCGAGUCUUAAUCAUCUCGGCUCUGCCCUGAGAUUCAAUUUCUACACGUUCUUGUGCUUUCUUCGCAGCUUCUUCCUGAGCAUCUGAAAGUUUAUUCCAAGCUACAAUUACACCUGUAAUAACUACAGAUAAUCCAAGAGUAAGAGUUGCCAUAAGUGCAGUUGCAGCAGCAUUAGAUAUACCUAACGAUGUUGCAAGCCGAUAAUUAGCAGCUGCAAGGAACUCCUUUGCUUUUGUAAGCGUUACAAGGCGGAAGGCACUAUCCUUGUUAAGAGUAUUAAACACCUGCUGCAAGCCCAUGGUGAUAGCCAUGACACUCUGCACGCGAGCUUGUAUCUUUGCGAGAUUCUCGUUCUCUGAUGCGAAUAACGACAUUACACCUGUAGCUGUGGUGAAUGCACCAGACAGACCAUUAACUCCCGAGAUGAAGCCCUGAAGGUUCGCAUCGUCAUUAGCGAGAAUACUUGUCUGUGCACGCAAGUCUCCUAAGGUGUCGGAGAGCUCAGCUGCCUUUUGUGCCAUCUUCUGGUACUCUUCGGUAUUCUGCUCGCCGUUCAGACGCAUACGUGCCAUGUCGUUUUGCAGCUCACGUAGUUGACGCGACAAUCGUUGAUUGCUUUCCUUGUUGCGAUUCUGUGCUUCUGUCAGGCUAUUUAGAAUUCCCUUUUCUUCUUCUAAGGCUUGUUUGGCUGCAUUCAAAUCGGCUGCUACUUCAUUUUGUGCUUUGCCAGGUGCUGCGGACUCAUAAGCUUUCUGUAGAGCCUUCACGUCAGCCUCCACCUGCUUGAUGACACUCUUCUGCUCAGCUAUCUUUUCGGUGAGCGAUUUGCUGGCAGCUGCUGCUUGCUCUUCUGAUACAGAUAUUUUCUUAUAUUCCUGCUCCAAUUGACUGACGCCCUGCCGUGCCUGCUGAUAUUCUUUUUCCAACCCCUCAAGCACACCCAUCUCUUCGGCAAGUACUUUCUUGCAAGCACUAAUUUCCGUAAACAGUUCUUGUUGUCCUGUCCCUGGUUUCAUAGUCUGCAACUUACGCUGCAUACGGUCAAGGUCAGUAUUGACACUAUCAAUUACCUUAUGCUGGUCGUUGAUCUUAGCAUUGAUAAAGAGCGAAGCACGUCGAGCUGCUCCUAAGAGCUGCUCAACACUCAUCUUGCUUUUGUCAAGUCCUGCCGUGAGGUUAUCACGCAUAAGGAAUUCUAUCUCUACUGGUUUCAUUGUCUUAUUGGUUUAAAUUACUUUGAAAAAAGCCUACUAUAUCCUCAGCUUCCUCCUCUUCAGUCUGAUCUUUCUUUUGUUCACGGCUAUCAACAUAACGUGGUGCAUCACUCAGCAUCAUGAUAAGUGUCUGAAAAUUUACGCCAUUCAGAAUGUAGUCCACGCUCCAUCCCGUAGCGCUGGCUAUUUGCCAGAUAAAUCCGAAAGGGCUAUGGGAGCUUUCCCAAUGGCUCUUUA ....((..((..(..(..((((((((((...((.......))...................................(((..((.((.....))))..))).......................))))))))))..)..)..)).((((((((((..(((((((....((.....))...((((.....((..(((.....)))..)).....)))).........)))))))...((((..((((((..(((.((((((((((((.......((((.(((((((.....((((((((((((..(((((....)))))...))))...)))).)))).((..((((.((.....)).))))...)).))))))).....(((((((.((((((.((((((((((..((((...((.(((..((((((((.......).)))))))..)))..))..))))................((((((....(((((....)))))....(((((.(((...(((((..(..((.......((((....((((((..((((((((...((((..........))))....))))))))...(((((((.......)))))))..))))))..((((....))))........((((((.((((((((..(((((..(((((.....)))))...(((((....))))).....)))))..))..)).).))))))))).....))))..((((((((.(.((((......)))).).))))))))...))..)..))))).))).)))))..)))))).)))))))))).....))))))..)))))))...........)))).........))))))))..((.((((((((((((......(((((((.(.(((((((((((...(((((...))))).....)))))......((.((...((((((.(((((...(((((((((((((((..((.......((.((.(.(((((.....((..(((((.(..(.((((.((((...(((((........))))))))))))))..)..((((((((((((........((((((.....)))))).....(((((..(((((........)).)))...))))).((((((....(((((.....)))))..))))))...)))))..)))))))....)))))..))..)))))).)).))....((((((.............))))))))..))))))).))))))))...)))))((.((........)))).....)))))).)))).......)))))).))))))))...(((((.(((.((..((..((..(((((....((((.((((...(((((..((((.((((((...((.(((....)))))))))))..))))...)))))........((((..((((.((((..((((((........((((.((((.......................))))..............(((((......)))))..))))......(((((..((((....(((((.((((..........))))...)))))....))))..))))).....)))))))))).....((((((.(((.......))).))))))...))))..))))..))))))))...((.((((.((((....)))).)))).))..)))))..))....))..))..))).)))))))))))))).)))..)).........)))).)))..))))))))))..((((.((((((.((((....))))............(((((............(((((((.(........).))).))))..........((((((((........))))))))......).)))).)))))).))))...))))))))))....))....(((((((((.(((((.....)))))......((....)))))))))))(((........)))...... (-556.01) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 456 1168 1123 229 181 pint:PI0333|5end_hypothetical_protein_313478..313708_POSITIVE 411 1169 1122 205 141 pint:PI1525|5end_CDP-diacylglycerol--serine_O-phosphatidyltransferase_1446758..1446988_POSITIVE 410 989 944 70 19 pint:PI0355|5end_probable__N-acetylmuramoyl-L-alanine_amidase_326157..326387_POSITIVE 406 959 912 178 134 pint:PI0465|5end_50S_ribosomal_protein_L22_435306..435536_POSITIVE 397 980 932 111 59 pint:PI0439|5end_conserved_hypothetical_protein;_possible_preprotein_translocase_subunit_SecE_410319..410549_POSITIVE 397 460 411 225 171 pint:PI0429|5end_hypothetical_protein_396418..396648_POSITIVE 394 1168 1123 194 145 pint:PI0737|5end_hypothetical_protein_671182..671412_POSITIVE 393 650 601 69 17 pint:PI1729|5end_FKBP-type_peptidyl-prolyl_cis-trans_isomerase,_trigger_factor_1648416..1648646_POSITIVE 392 927 881 225 176 pint:PI2033|5end_hypothetical_protein_1987068..1987298_POSITIVE 391 909 861 87 31 pint:PI1617|5end_hypothetical_protein_1542923..1543153_POSITIVE 382 686 644 87 31 pint:PI1079|5end_conserved_hypothetical_protein_999863..1000093_POSITIVE 379 96 54 194 153 pint:PI2034|5end_conserved_hypothetical_protein_1987573..1987803_POSITIVE 375 1106 1063 197 150 pint:PI1831|5end_conserved_hypothetical_protein_1770298..1770528_POSITIVE 372 908 861 102 39 pint:PI0734|5end_ABC_transporter,_ATP-binding_/_permease_667052..667282_POSITIVE 371 1680 1635 143 79 pint:PI1884|5end_conserved_hypothetical_protein_1826883..1827113_POSITIVE 370 1097 1054 68 30 pint:PI0356|5end_hypothetical_protein_326642..326872_POSITIVE 369 559 511 223 157 pint:PI0733|5end_membrane_protein;_predicted_exporter_664389..664619_POSITIVE 368 528 492 50 12 pint:PI1913|5end_conserved_hypothetical_protein_1857104..1857334_POSITIVE 367 1169 1123 87 12 pint:PI2021|5end_DNA_repair_protein_1977925..1978155_POSITIVE 367 985 941 98 49 pint:PI1009|5end_cytochrome_c_nitrite_reductase,_large_subunit_929342..929572_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 443 1170 1123 118 55 pint:PI1608|3end_possible_Na+/H+_anti-porter_1536300..1536450_POSITIVE 410 989 944 74 23 pint:PI0354|3end_hypothetical_protein_326241..326391_POSITIVE 406 959 912 143 99 pint:PI0464|3end_30S_ribosomal_protein_S19_435351..435501_POSITIVE 386 468 421 53 3 pint:PI0428|3end_hypothetical_protein_396321..396471_POSITIVE 382 686 644 74 18 pint:PI1078|3end_conserved_hypothetical_protein_999930..1000080_POSITIVE 373 1169 1123 81 37 pint:PI1794|3end_conserved_hypothetical_protein_1726696..1726846_POSITIVE 370 1097 1054 44 6 pint:PI0355|3end_probable__N-acetylmuramoyl-L-alanine_amidase_326698..326848_POSITIVE 369 559 511 121 55 pint:PI0732|3end_conserved_hypothetical_protein_664367..664517_POSITIVE 368 1165 1121 96 48 pint:PI0624|3end_hypothetical_protein_574471..574621_POSITIVE 366 1261 1224 41 4 pint:PI1040|3end_8-amino-7-oxononanoate_synthase_960202..960352_POSITIVE 366 715 674 143 105 pint:PI0016|3end_magnesium_chelatase,_subunit_ChlI_21725..21875_POSITIVE 361 140 91 146 103 pint:PI2137|3end_RNA_methylase_SpoU_family_2083807..2083957_POSITIVE 357 1549 1503 93 37 pint:PI1491|3end_conserved_hypothetical_protein_1410188..1410338_POSITIVE 357 637 604 53 11 pint:PI0683|3end_hypothetical_protein_619797..619947_POSITIVE 356 577 542 134 96 pint:PI1945|3end_ribonuclease_HII_1902587..1902737_POSITIVE 356 1408 1361 78 14 pint:PI0006|3end_hypothetical_protein_8268..8418_POSITIVE 355 1056 1014 59 11 pint:PI1651|3end_hypothetical_protein_1564512..1564662_POSITIVE 354 906 861 76 30 pint:PI1136|3end_conserved_hypothetical_protein_1062541..1062691_POSITIVE 352 920 871 149 100 pint:PI0521|3end_hypothetical_protein_479061..479211_POSITIVE 352 445 401 66 19 pint:PI0206|3end_TPR-repeat-containing_protein_199856..200006_POSITIVE