Origin IGS: taattcgtgctgcataaacgagtcgggcgagaaggaaaagcccttttcgtggcgtcgtttcgcatagagctttatcaagtcgcgagcaatatccttgatgcgtttcttcgccttttccttgagtctgtcccacgctcccgagccaagaacagaaagacgtggtgcagcatcgccactatcggcacggcgatatttgctgattttgtagagcgaatggatagaaacgtccacaatatcgttgtgctgatacaccaagcgtatcatttcctgataggattcgcctgccggaacacgcaccaaacctgcaaacttaccaatgccaaagtctacgtggacaaggaaatcgcctggttccatctcttgcaactctttcattgtaagtgccatcttaccctgtcgagccttgtcagactttaggctgtacttgtggaagcggtcgaaaatctggtggtcggtgaagaaacaaactttcaaatcgttgtcgatgaagccctcgtgaatggttctgttcacgggcataaaggggatattgtctgccacagaggtcgtttcggcttcgccgtctgcccccttactgtcgaatatatcgcgcaaacgcgttgtttgtttctcgctgtcggcaagaatatagagtttgtatccttgcagcagatagtctttcaatgactgcgtaagcaactcaaagttcttgtgaaagagtggttgtggcgaaatattaaaacgtataatcgccttgctttcctcgttctttgcacggttcgcaccaaactctatgcgcttgaagttcaaggcatcgtcggtaaactgttgcgccgttatgagttgaagattagcctgtaactgctttctcaactcgttttgctctgtttccgttttgccttcgagctgctcggtcagtgcttgtgcagtgaaaccatcgttataaatgcgttcgatagtatcgtgaatatacagcaaatccttcattacgagaacagaatctttcggcagaaactgcaagaaaggtattttctcttcgctcaatgtagccaattccggcacaatctccaccttttctttcttgtctttcgatagctgcgtttccacctcaaaagtacgaatcgtatctacatcgttgccgaaaaagtcgatacgataaggcagttcgctcgaaaaggaatagacatcgagaatgctgccacgcacggcaaactgccctggctcgtacacatagtctacttgttggaagccatacgagcgcaaagtcttctctgtttcagttaaatccatcgtctgtccgacactcacagacaaggtatgctcgtccaacttgtgcttggcaaccaccaattctgccaacgccgaaggctcggtaacgatgcaaagaggcaacgaagcggtagcttttgcctcgttgatgaccgacaaacgcgacagaacctccgtacgcagtatctcgtttcctgcatcgcgctgaccatatttcaccgccctgcgatacgaagaggggaaaaacaacacctcagcagtctgctcctgcctattttcgggcatggcaattgttttcaaatcgttgtagaaatagcccgcttcgtcgttgtcgttcagtacgaaaagcattgttttttgccatcgtttcactatcgaagcaaagaacattggtgtggcagaagccaataatccttgaagaaaaaccgtgcgaaccgacttttcttccattgttttcatcaaagcatcgccctgtggcaacactccatatagtttctgtatgtcttgtatattcatcgcaatcattgcgttccgacaaaccgtcggatttcttttttgaagtacaaaggtacaacttttaccttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 gataatatatttccgtatttgctcgaagctgttttattttgctatgtattgcttggcgagaatgcttgtaactatttggctttcagttgaaaatctgttaaaaaatagtgcttttgtgccctttgaacaaccttttttacaccgcttttacgacaataaaataaaaacataggtactttccagaaaaaatgtccgtactttttcgagaaaacgtccgtacttttttatgaaaacgtccgtactttttttatagaatgtaggtactttccaattctttacttctgacgtttgaaaaacaagcaataaacgaatggtggagtcgggtctaaattcttcagttcaaagcagactatatataaggtaaaagttgtacctttgtacttcaaaaaagaaatccgacggtttgtcggaacgcaatgattgcgatgaatatacaagacatacagaaactatatggagtgttgccacagggcgatgctttgatgaaaacaatggaagaaaagtcggttcgcacggtttttcttcaaggattattggcttctgccacaccaatgttctttgcttcgatagtgaaacgatggcaaaaaacaatgcttttcgtactgaacgacaacgacgaagcgggctatttctacaacgatttgaaaacaattgccatgcccgaaaataggcaggagcagactgctgaggtgttgtttttcccctcttcgtatcgcagggcggtgaaatatggtcagcgcgatgcaggaaacgagatactgcgtacggaggttctgtcgcgtttgtcggtcatcaacgaggcaaaagctaccgcttcgttgcctctttgcatcgttaccgagccttcggcgttggcagaattggtggttgccaagcacaagttggacgagcataccttgtctgtgagtgtcggacagacgatggatttaactgaaacagagaagactttgcgctcgtatggcttccaacaagtagactatgtgtacgagccagggcagtttgccgtgcgtggcagcattctcgatgtctattccttttcgagcgaactgccttatcgtatcgactttttcggcaacgatgtagatacgattcgtacttttgaggtggaaacgcagctatcgaaagacaagaaagaaaaggtggagattgtgccggaattggctacattgagcgaagagaaaatacctttcttgcagtttctgccgaaagattctgttctcgtaatgaaggatttgctgtatattcacgatactatcgaacgcatttataacgatggtttcactgcacaagcactgaccgagcagctcgaaggcaaaacggaaacagagcaaaacgagttgagaaagcagttacaggctaatcttcaactcataacggcgcaacagtttaccgacgatgccttgaacttcaagcgcatagagtttggtgcgaaccgtgcaaagaacgaggaaagcaaggcgattatacgttttaatatttcgccacaaccactctttcacaagaactttgagttgcttacgcagtcattgaaagactatctgctgcaaggatacaaactctatattcttgccgacagcgagaaacaaacaacgcgtttgcgcgatatattcgacagtaagggggcagacggcgaagccgaaacgacctctgtggcagacaatatcccctttatgcccgtgaacagaaccattcacgagggcttcatcgacaacgatttgaaagtttgtttcttcaccgaccaccagattttcgaccgcttccacaagtacagcctaaagtctgacaaggctcgacagggtaagatggcacttacaatgaaagagttgcaagagatggaaccaggcgatttccttgtccacgtagactttggcattggtaagtttgcaggtttggtgcgtgttccggcaggcgaatcctatcaggaaatgatacgcttggtgtatcagcacaacgatattgtggacgtttctatccattcgctctacaaaatcagcaaatatcgccgtgccgatagtggcgatgctgcaccacgtctttctgttcttggctcgggagcgtgggacagactcaaggaaaaggcgaagaaacgcatcaaggatattgctcgcgacttgataaagctctatgcgaaacgacgccacgaaaagggcttttccttctcgcccgactcgtttatgcagcacgaatta Mask Tandem Repeat Region ================================================ taattcgtgctgcataaacgagtcgggcgagaaggaaaagcccttttcgtggcgtcgtttcgcatagagctttatcaagtcgcgagcaatatccttgatgcgtttcttcgccttttccttgagtctgtcccacgctcccgagccaagaacagaaagacgtggtgcagcatcgccactatcggcacggcgatatttgctgattttgtagagcgaatggatagaaacgtccacaatatcgttgtgctgatacaccaagcgtatcatttcctgataggattcgcctgccggaacacgcaccaaacctgcaaacttaccaatgccaaagtctacgtggacaaggaaatcgcctggttccatctcttgcaactctttcattgtaagtgccatcttaccctgtcgagccttgtcagactttaggctgtacttgtggaagcggtcgaaaatctggtggtcggtgaagaaacaaactttcaaatcgttgtcgatgaagccctcgtgaatggttctgttcacgggcataaaggggatattgtctgccacagaggtcgtttcggcttcgccgtctgcccccttactgtcgaatatatcgcgcaaacgcgttgtttgtttctcgctgtcggcaagaatatagagtttgtatccttgcagcagatagtctttcaatgactgcgtaagcaactcaaagttcttgtgaaagagtggttgtggcgaaatattaaaacgtataatcgccttgctttcctcgttctttgcacggttcgcaccaaactctatgcgcttgaagttcaaggcatcgtcggtaaactgttgcgccgttatgagttgaagattagcctgtaactgctttctcaactcgttttgctctgtttccgttttgccttcgagctgctcggtcagtgcttgtgcagtgaaaccatcgttataaatgcgttcgatagtatcgtgaatatacagcaaatccttcattacgagaacagaatctttcggcagaaactgcaagaaaggtattttctcttcgctcaatgtagccaattccggcacaatctccaccttttctttcttgtctttcgatagctgcgtttccacctcaaaagtacgaatcgtatctacatcgttgccgaaaaagtcgatacgataaggcagttcgctcgaaaaggaatagacatcgagaatgctgccacgcacggcaaactgccctggctcgtacacatagtctacttgttggaagccatacgagcgcaaagtcttctctgtttcagttaaatccatcgtctgtccgacactcacagacaaggtatgctcgtccaacttgtgcttggcaaccaccaattctgccaacgccgaaggctcggtaacgatgcaaagaggcaacgaagcggtagcttttgcctcgttgatgaccgacaaacgcgacagaacctccgtacgcagtatctcgtttcctgcatcgcgctgaccatatttcaccgccctgcgatacgaagaggggaaaaacaacacctcagcagtctgctcctgcctattttcgggcatggcaattgttttcaaatcgttgtagaaatagcccgcttcgtcgttgtcgttcagtacgaaaagcattgttttttgccatcgtttcactatcgaagcaaagaacattggtgtggcagaagccaataatccttgaagaaaaaccgtgcgaaccgacttttcttccattgttttcatcaaagcatcgccctgtggcaacactccatatagtttctgtatgtcttgtatattcatcgcaatcattgcgttccgacaaaccgtcggatttcttttttgaagtacaaaggtacaacttttaccttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Find is-nt database================================================ Query_seq: PI1572:PI1574|PI1572:PI1574:hypothetical protein:conserved hypothetical protein:->->:1498276..1500464 2189 taattcgtgctgcataaacgagtcgggcgagaaggaaaagcccttttcgtggcgtcgtttcgcatagagctttatcaagtcgcgagcaatatccttgatgcgtttcttcgccttttccttgagtctgtcccacgctcccgagccaagaacagaaagacgtggtgcagcatcgccactatcggcacggcgatatttgctgattttgtagagcgaatggatagaaacgtccacaatatcgttgtgctgatacaccaagcgtatcatttcctgataggattcgcctgccggaacacgcaccaaacctgcaaacttaccaatgccaaagtctacgtggacaaggaaatcgcctggttccatctcttgcaactctttcattgtaagtgccatcttaccctgtcgagccttgtcagactttaggctgtacttgtggaagcggtcgaaaatctggtggtcggtgaagaaacaaactttcaaatcgttgtcgatgaagccctcgtgaatggttctgttcacgggcataaaggggatattgtctgccacagaggtcgtttcggcttcgccgtctgcccccttactgtcgaatatatcgcgcaaacgcgttgtttgtttctcgctgtcggcaagaatatagagtttgtatccttgcagcagatagtctttcaatgactgcgtaagcaactcaaagttcttgtgaaagagtggttgtggcgaaatattaaaacgtataatcgccttgctttcctcgttctttgcacggttcgcaccaaactctatgcgcttgaagttcaaggcatcgtcggtaaactgttgcgccgttatgagttgaagattagcctgtaactgctttctcaactcgttttgctctgtttccgttttgccttcgagctgctcggtcagtgcttgtgcagtgaaaccatcgttataaatgcgttcgatagtatcgtgaatatacagcaaatccttcattacgagaacagaatctttcggcagaaactgcaagaaaggtattttctcttcgctcaatgtagccaattccggcacaatctccaccttttctttcttgtctttcgatagctgcgtttccacctcaaaagtacgaatcgtatctacatcgttgccgaaaaagtcgatacgataaggcagttcgctcgaaaaggaatagacatcgagaatgctgccacgcacggcaaactgccctggctcgtacacatagtctacttgttggaagccatacgagcgcaaagtcttctctgtttcagttaaatccatcgtctgtccgacactcacagacaaggtatgctcgtccaacttgtgcttggcaaccaccaattctgccaacgccgaaggctcggtaacgatgcaaagaggcaacgaagcggtagcttttgcctcgttgatgaccgacaaacgcgacagaacctccgtacgcagtatctcgtttcctgcatcgcgctgaccatatttcaccgccctgcgatacgaagaggggaaaaacaacacctcagcagtctgctcctgcctattttcgggcatggcaattgttttcaaatcgttgtagaaatagcccgcttcgtcgttgtcgttcagtacgaaaagcattgttttttgccatcgtttcactatcgaagcaaagaacattggtgtggcagaagccaataatccttgaagaaaaaccgtgcgaaccgacttttcttccattgttttcatcaaagcatcgccctgtggcaacactccatatagtttctgtatgtcttgtatattcatcgcaatcattgcgttccgacaaaccgtcggatttcttttttgaagtacaaaggtacaacttttaccttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI1572:PI1574|PI1572:PI1574:hypothetical protein:conserved hypothetical protein:->->:1498276..1500464 2189 taattcgtgctgcataaacgagtcgggcgagaaggaaaagcccttttcgtggcgtcgtttcgcatagagctttatcaagtcgcgagcaatatccttgatgcgtttcttcgccttttccttgagtctgtcccacgctcccgagccaagaacagaaagacgtggtgcagcatcgccactatcggcacggcgatatttgctgattttgtagagcgaatggatagaaacgtccacaatatcgttgtgctgatacaccaagcgtatcatttcctgataggattcgcctgccggaacacgcaccaaacctgcaaacttaccaatgccaaagtctacgtggacaaggaaatcgcctggttccatctcttgcaactctttcattgtaagtgccatcttaccctgtcgagccttgtcagactttaggctgtacttgtggaagcggtcgaaaatctggtggtcggtgaagaaacaaactttcaaatcgttgtcgatgaagccctcgtgaatggttctgttcacgggcataaaggggatattgtctgccacagaggtcgtttcggcttcgccgtctgcccccttactgtcgaatatatcgcgcaaacgcgttgtttgtttctcgctgtcggcaagaatatagagtttgtatccttgcagcagatagtctttcaatgactgcgtaagcaactcaaagttcttgtgaaagagtggttgtggcgaaatattaaaacgtataatcgccttgctttcctcgttctttgcacggttcgcaccaaactctatgcgcttgaagttcaaggcatcgtcggtaaactgttgcgccgttatgagttgaagattagcctgtaactgctttctcaactcgttttgctctgtttccgttttgccttcgagctgctcggtcagtgcttgtgcagtgaaaccatcgttataaatgcgttcgatagtatcgtgaatatacagcaaatccttcattacgagaacagaatctttcggcagaaactgcaagaaaggtattttctcttcgctcaatgtagccaattccggcacaatctccaccttttctttcttgtctttcgatagctgcgtttccacctcaaaagtacgaatcgtatctacatcgttgccgaaaaagtcgatacgataaggcagttcgctcgaaaaggaatagacatcgagaatgctgccacgcacggcaaactgccctggctcgtacacatagtctacttgttggaagccatacgagcgcaaagtcttctctgtttcagttaaatccatcgtctgtccgacactcacagacaaggtatgctcgtccaacttgtgcttggcaaccaccaattctgccaacgccgaaggctcggtaacgatgcaaagaggcaacgaagcggtagcttttgcctcgttgatgaccgacaaacgcgacagaacctccgtacgcagtatctcgtttcctgcatcgcgctgaccatatttcaccgccctgcgatacgaagaggggaaaaacaacacctcagcagtctgctcctgcctattttcgggcatggcaattgttttcaaatcgttgtagaaatagcccgcttcgtcgttgtcgttcagtacgaaaagcattgttttttgccatcgtttcactatcgaagcaaagaacattggtgtggcagaagccaataatccttgaagaaaaaccgtgcgaaccgacttttcttccattgttttcatcaaagcatcgccctgtggcaacactccatatagtttctgtatgtcttgtatattcatcgcaatcattgcgttccgacaaaccgtcggatttcttttttgaagtacaaaggtacaacttttaccttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 22 Max: 1359 Len: 1338 Subject: gi|89107960|ref|AP_001740.1| transcription-repair coupling factor [Escherichia coli W3110] HSP 1 e-value: 7.0E-31 bit: 132.0 Len: 1338 Query Start:22 Query End:1359 Subject Strand: null Subject Start: 106 Subject End: 586 ..................... I V T E P S A L A E L V V A K H K L D E H T L S V S V G Q T M D L T E T E K T L R S Y G F Q Q V D Y V Y E P G Q F A V R G S I L D V Y S F S S E L P Y R I D F F G N D V D T I R T F E V E T Q L S K D K K E K V E I V P - - E L A T L S E E K I P F L Q F L P K D S V L V M K D L L Y I H D T I E R - - - - - - - - - - - - - - - - - - - - - - - I Y N D G F T A Q A L T E Q L E G K T E T E Q - - - - - - - - - - - - N E L R K Q L Q A N L Q L I T A Q Q F T D D A L N F K R I E F G A N R A K N E E S K A I I R F N I S P Q P L F H K N F E L L T Q S L K D Y L - - L Q G Y K L Y I L A D S E K Q T T R L R D I F D - - S K G A D G E A E T T S V A D N I P F M P V N R T I H E G F I D N D L K V C F F T D H Q I F D R F H K Y S L K S D K A R Q G K M A L T M K E L Q E M E P G D F L V H V D F G I G K F A G L V R V P A G E S Y Q E M I R L V Y Q H N D I V D V S I H S L Y K I S K Y R R A D S G D A A P R L S V L G S G A W D R L K E K A K K R I K D I A R D L I K L Y A K R R H E K G F S F S P D .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..................... L I V P V N T L M Q R V C P H S F L H G H A L V M K K G Q R L S R D A L R T Q L D S A G Y R H V D Q V M E H G E Y A T R G A L L D L F P M G S E L P Y R L D F F D D E I D S L R V F D V D S Q R T L E E V E A I N L L P A H E F P T - D K A A I E L F R S Q W R D T F E V K R D P E H I Y Q Q V S K G T L P A G I E Y W Q P L F F S E P L P P L F S Y F P A N T L L V N T G D L E T S A E R F Q A D T L A R F E N R G V D P M R P L L P P Q S L W L R V D E L F S E L K N W P R V Q L K T E H L P T K A A N A N L G F Q K L P D L A V Q A Q Q K A P L D A L R K F L E T F D G P V V F S V - E S E G R R E A L G E L L A R I K I A P Q R I M R L D E A S D R G R Y L M I G A A E H - G F V D T V R N L A L I C E S D L L G E - R V A R R R Q D S R R T I N P D T L I R N L A E L H I G Q P V V H L E H G V G R Y A G M T T L E A G G I T G E Y L M L T Y A N D A K L Y V P V S S L H L I S R Y - - A G G A E E N A P L H K L G G D A W S R A R Q K A A E K V R D V A A E L L D I Y A Q R A A K E G F A F K H D .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Find nr database================================================ Query_seq: PI1572:PI1574|PI1572:PI1574:hypothetical protein:conserved hypothetical protein:->->:1498276..1500464 2189 taattcgtgctgcataaacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaaagaggcaacgaagcggtagcttttgcctcgttgatgaccgacaaacgcgacagaacctccgtacgcagtatctcgtttcctgcatcgcgctgaccatatttcaccgccctgcgatacgaagaggggaaaaacaacacctcagcagtctgctcctgcctattttcgggcatggcaattgttttcaaatcgttgtagaaatagcccgcttcgtcgttgtcgttcagtacgaaaagcattgttttttgccatcgtttcactatcgaagcaaagaacattggtgtggcagaagccaataatccttgaagaaaaaccgtgcgaaccgacttttcttccattgttttcatcaaagcatcgccctgtggcaacactccatatagtttctgtatgtcttgtatattcatcgcaatcattgcgttccgacaaaccgtcggatttcttttttgaagtacaaaggtacaacttttaccttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 17 Min: 1366 Max: 1830 Len: 465 Subject: UniRef90_Q64RK9 Cluster: Transcription-repair coupling factor; n=2; Bacteroides fragilis|Rep: Transcription-repair coupling factor - Bacteroides fragilis HSP 1 e-value: 1.0E-21 bit: 108.0 Len: 399 Query Start:1366 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 126 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N I Q D I Q K L Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S V I N E A K A T A S L P ......................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T I T E L Q H Q Y A G H P N V E A L N K L L G E P A V R H I Y C G G L Y A S A A S L F A S A L V E K S P C P F V F I L G D L E E A G Y F Y H D L T Q V L - - - - - - - G T E R I L F F P S S F R R S V K Y G Q K D A A N E I L R T E V L S R L Q K G E E G L C I V T Y P ......................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q8AB59 Cluster: Transcription-repair coupling factor; n=1; Bacteroides thetaiotaomicron|Rep: Transcription-repair coupling factor - Bacteroides thetaiotaomicron HSP 1 e-value: 4.0E-21 bit: 106.0 Len: 399 Query Start:1366 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 126 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N I Q D I Q K L Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S V I N E A K A T A S L P ......................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T I T E L Q Q Q Y A A H P N T A V M E R L L K D A S V Q T I F C G G L C A S S A S L F S S V L V K Q D V C P F V F V L G D L E E A G Y F Y H D L T Q V L - - - - - - - G T E K V F F F P S S F R R S I K Y G Q K D A A N E I L R T E V L S R L Q K G E E G L C I V T Y P ......................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A4ANA3 Cluster: Transcription-repair coupling factor; n=1; Flavobacteriales bacterium HTCC2170|Rep: Transcription-repair coupling factor - Flavobacteriales bacterium HTCC2170 HSP 1 e-value: 2.0E-9 bit: 67.8 Len: 429 Query Start:1402 Query End:1830 Subject Strand: null Subject Start: 19 Subject End: 163 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G K S C T F V L Q K R N P T V C R N A M I A M N I Q - - - - - - - - - - D I Q K L Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ....................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G P S S T Y I C N S K N E K T S E K S R L N Q N R R L L K I K R L I Q T T I Q Q L F T Q S P Q T R K L Q D A I A Q T E - N N I A I K G L I G S S L S F M F S S L F K E N D L P F L L I F N D K E E A A Y Y L N D L E L L I G E K - - - - - - - D V L F Y P G S Y R R P Y Q I E E T D N A N V L L R A E V L N R I N ....................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q7MU01 Cluster: Transcription-repair coupling factor; n=1; Porphyromonas gingivalis|Rep: Transcription-repair coupling factor - Porphyromonas gingivalis (Bacteroides gingivalis) HSP 1 e-value: 2.0E-9 bit: 67.4 Len: 348 Query Start:1366 Query End:1713 Subject Strand: null Subject Start: 22 Subject End: 127 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S V I N E A K A T A S L P ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... A L M K A L D R E - - K C V A L D G L C G S S A A L I - V K L L H E S G R P V L C I A S D M E E A G Y L F S D L E Q L G - - - - - - - G E G S A L F F P S S Y K R A I K Y G H T D A A Q Q V L R A E A L A A L S M E G S C P L V V S Y P ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q1VXX7 Cluster: Transcription-repair coupling factor; n=1; Psychroflexus torquis ATCC 700755|Rep: Transcription-repair coupling factor - Psychroflexus torquis ATCC 700755 HSP 1 e-value: 2.0E-9 bit: 67.4 Len: 363 Query Start:1402 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 114 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N I Q D I Q K L Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ......................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T K A D I K K H F S K S P I I K E L S E T L L S G E K K Q I F I K G L I G S A V S F V Q S E S F L K S E R P F L L V F N D K E E A A Y H L N D L E Q L V D E K N - - - - - - - V L F Y P G S Y R R P Y Q I E E T D N A N I L L R S E V L N R I N ......................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A0M658 Cluster: Transcription-repair coupling factor; n=1; Gramella forsetii KT0803|Rep: Transcription-repair coupling factor - Gramella forsetii (strain KT0803) HSP 1 e-value: 8.0E-9 bit: 65.5 Len: 363 Query Start:1402 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 116 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N I Q D I Q K L Y G V L P Q G D A L M K T M E - - E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ......................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S T S L I A Q K F A Q S P Q Q Q E L R N A I A S F E K N Q S N I H L K G L V G S A L S F V V A D A F K E S D H P F L L I F N D K E E A A Y Y L N D L E Q L V G E K N - - - - - - - V L F Y P G S Y R R P Y Q I E E T D N A N V L L R A E V L N R I N ......................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A3U5T4 Cluster: Transcription-repair coupling factor; n=1; Croceibacter atlanticus HTCC2559|Rep: Transcription-repair coupling factor - Croceibacter atlanticus HTCC2559 HSP 1 e-value: 1.0E-8 bit: 64.7 Len: 363 Query Start:1402 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 116 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N I Q D I Q K L Y G V L P Q G D A L M K T M - - E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ......................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S K T S I S Q A F S R S P Q F R K L Q D T I A Q S Q E N Y H K T T L T G L V G S A V S F A I A E A F K Q A D K P F L A I F N D K E E A A Y Y L N D F E Q L I K D D - - - - - - - E V L F Y P G S Y R R P Y Q I E E T D N A N V L L R A E V L N R L N ......................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A4CH44 Cluster: Transcription-repair coupling factor; n=1; Robiginitalea biformata HTCC2501|Rep: Transcription-repair coupling factor - Robiginitalea biformata HTCC2501 HSP 1 e-value: 3.0E-8 bit: 63.5 Len: 399 Query Start:1366 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 125 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N I Q D I Q K L Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S V I N E A K A T A S L P ......................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N L E T I R E K F Q Q A P F F R D L Q D A I A Q P A A - T V S L D G L T G S S L S F V V A E T F K A Q V C P M L V L L G D K E E A A Y V L N D L E E L L G R D N - - - - - - - V L F Y P G S Y R R P Y E I E E T D N A N V L L R A E V L S R I S S R K K P A L I V S Y P ......................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1XUY8 Cluster: Transcription-repair coupling factor; n=1; Flavobacterium johnsoniae UW101|Rep: Transcription-repair coupling factor - Flavobacterium johnsoniae UW101 HSP 1 e-value: 7.0E-8 bit: 62.4 Len: 336 Query Start:1402 Query End:1737 Subject Strand: null Subject Start: 10 Subject End: 114 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S .................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Y D N L P K A Q Q I A S G L L E G N Q I K M N I S G L L G S A V S F I I R S V F K K T E L P F L I V L D N K E E A A Y Y L N D L E Q M I G E Q - - - - - - - D V L F Y P V S F R R P Y Q V D E T D N A N V L L R A E V L N R I N .................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A2TR92 Cluster: Transcription-repair coupling factor; n=1; Dokdonia donghaensis MED134|Rep: Transcription-repair coupling factor - Dokdonia donghaensis MED134 HSP 1 e-value: 3.0E-7 bit: 60.5 Len: 264 Query Start:1402 Query End:1665 Subject Strand: null Subject Start: 59 Subject End: 139 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K G L T G S S L S F A V S Q L F E G R E R P V L L I L N D K E E A A Y Y L N D L E A L R K E E N - - - - - - - V L F Y P G S Y R R P Y Q I E E T D N A N I L L R A E V L N R V N ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_A3XHA3 Cluster: Transcription-repair coupling factor; n=1; Leeuwenhoekiella blandensis MED217|Rep: Transcription-repair coupling factor - Leeuwenhoekiella blandensis MED217 HSP 1 e-value: 8.0E-7 bit: 58.9 Len: 285 Query Start:1402 Query End:1686 Subject Strand: null Subject Start: 26 Subject End: 113 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S Q N R I N L D G L I G S S L S I A I A E S F K T A D K P F L V I L N D K E E A T Y I L N D L E Q L V K E D H - - - - - - - V L F Y P G S Y R R P Y Q I E G T D N A N I L L R A E V L N R I N ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A4BY22 Cluster: Transcription-repair coupling factor; n=1; Polaribacter irgensii 23-P|Rep: Transcription-repair coupling factor - Polaribacter irgensii 23-P HSP 1 e-value: 1.0E-6 bit: 58.2 Len: 294 Query Start:1375 Query End:1668 Subject Strand: null Subject Start: 32 Subject End: 119 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S V I N E A K A T A ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. I T N L V G S S L S F V I S E T F K T S E R P Y L L V L N D K E E A A Y Y L N D L E Q L L G E K N - - - - - - - V L F Y P G S Y R R P Y Q I E E V D N A N V L L R S E V L N R - - - I N S Q K K S A ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q26GG0 Cluster: Transcription-repair coupling factor; n=1; Flavobacteria bacterium BBFL7|Rep: Transcription-repair coupling factor - Flavobacteria bacterium BBFL7 HSP 1 e-value: 1.0E-6 bit: 58.2 Len: 363 Query Start:1402 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 113 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N I Q D I Q K L Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ......................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S F N K I L K Q Y A Q A S Q T Q S L R E V V S Q S Q G Y T - H L S G L Q G S A F T I A A S S I F D E V E K P F M I I A N D K E Q A A Y M L N D F E K M L G D D R - - - - - - - V L F Y P G S Y R R P Y Q I E K T D N A N V L L R A E V L N R I N ......................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A3J3N7 Cluster: Transcription-repair coupling factor; n=1; Flavobacteria bacterium BAL38|Rep: Transcription-repair coupling factor - Flavobacteria bacterium BAL38 HSP 1 e-value: 4.0E-6 bit: 56.6 Len: 267 Query Start:1402 Query End:1668 Subject Strand: null Subject Start: 1 Subject End: 82 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T G L V G S S L S F V A H S L F K K S E L P F L I L F S N K E E A A Y Y L N D L E Q L I N A E - - - - - - - D V L F Y P S S Y R R P Y Q I E E T D N A N V L L R A E V L N R I N ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A2TX72 Cluster: Transcription-repair coupling factor; n=1; Polaribacter dokdonensis MED152|Rep: Transcription-repair coupling factor - Polaribacter dokdonensis MED152 HSP 1 e-value: 5.0E-6 bit: 56.2 Len: 267 Query Start:1402 Query End:1668 Subject Strand: null Subject Start: 32 Subject End: 113 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R L S ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I S N L A G S S L S F V I S E S F K K V V K P Y L L V F N D K E E A A Y Y L N D L E Q L L G D K N - - - - - - - V L F Y P G S Y R R P Y Q I E D T D N A N V L L R S E V L N R I N ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q257D5 Cluster: Putative transcription repair-coupling factor; n=1; uncultured Porphyromonadaceae bacterium|Rep: Putative transcription repair-coupling factor - uncultured Porphyromonadaceae bacterium HSP 1 e-value: 7.0E-6 bit: 55.8 Len: 168 Query Start:1408 Query End:1575 Subject Strand: null Subject Start: 2 Subject End: 50 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... D E A G Y F Y N D L K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S R ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... D E A G Y L Y S D L C Q I L - - - - - G E Q A A - - L L F P S G Y K R D I K Y G Q E D A P S Q I L R A E V L S R ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q11PH6 Cluster: Transcription-repair coupling factor; n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Transcription-repair coupling factor - Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) HSP 1 e-value: 7.0E-6 bit: 55.8 Len: 354 Query Start:1411 Query End:1764 Subject Strand: null Subject Start: 1 Subject End: 110 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M N I Q D I Q K L Y G V L P Q G D A L M K T M E E K S V R T V F L Q G L L A S A T P M F F A S I V K R W Q K T M L F V L N D N D E A G Y F Y N D L - K T I A M P E N R Q E Q T A E V L F F P S S Y R R A V K Y G Q R D A G N E I L R T E V L S ......................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M K V T E L L N I Y E K D S H I Q L L K Q K L Q E R E N N A L F L K G L S G S M D A L I A A A L S K S D K K S H V F I L A D K D E A Y F F Q N D L Q Q L L G L P - - - - - - - - - V F V F P A S Y K K P Y H Y E Q V E N A N I L Q R A E T L N ......................................................................................................................................................................................................................................................................................................................................................................................................................................... taattcgtgctgcataaacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Predict ORF larger than 30AA ================================================ Protein_Len: 44 Strand: + Start: 74 End: 205 ......................................................................... M K S R A I S L M R F F A F S L S L S H A P E P R T E R R G A A S P L S A R R Y L L I L ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 34 Strand: + Start: 276 End: 377 ................................................................................................................................................................................................................................................................................... M R L P E H A P N L Q T Y Q C Q S L R G Q G N R L V P S L A T L S L .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 7 End: 414 ...... M L H K R V G R E G K A L F V A S F R I E L Y Q V A S N I L D A F L R L F L E S V P R S R A K N R K T W C S I A T I G T ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 317 End: 496 ............................................................................................................................................................................................................................................................................................................................ M P K S T W T R K S P G S I S C N S F I V S A I L P C R A L S D F R L Y L W K R S K I W W S V K K Q T F K S L S M K P S ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 43 Strand: + Start: 500 End: 628 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M V L F T G I K G I L S A T E V V S A S P S A P L L S N I S R K R V V C F S L S A R I ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 427 End: 663 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... M E A V E N L V V G E E T N F Q I V V D E A L V N G S V H G H K G D I V C H R G R F G F A V C P L T V E Y I A Q T R C L ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 46 Strand: + Start: 534 End: 671 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M P Q R S F R L R R L P P Y C R I Y R A N A L F V S R C R Q E Y R V C I L A A D S L S M T A .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 37 Strand: + Start: 713 End: 823 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M L K R I I A L L S S F F A R F A P N S M R L K F K A S S V N C C A V M S ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: + Start: 667 End: 837 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R K Q L K V L V K E W L W R N I K T Y N R L A F L V L C T V R T K L Y A L E V Q G I V G K L L R R Y E L K I S L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 841 End: 1071 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M L S Q L V L L C F R F A F E L L G Q C L C S E T I V I N A F D S I V N I Q Q I L H Y E N R I F R Q K L Q E R Y F L F A .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 947 End: 1135 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M Y S K S F I T R T E S F G R N C K K G I F S S L N V A N S G T I S T F S F L S F D S C V S T S K V R I V S T S L P K K .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 1075 End: 1260 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M R F H L K S T N R I Y I V A E K V D T I R Q F A R K G I D I E N A A T H G K L P W L V H I V Y L L E A I R A Q S L L C ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 1032 End: 1352 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M P A Q S P P F L S C L S I A A F P P Q K Y E S Y L H R C R K S R Y D K A V R S K R N R H R E C C H A R Q T A L A R T H ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 1268 End: 1453 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M V C P T L T D K V C S S N L C L A T T N S A N A E G S V T M Q R G N E A V A F A S L M T D K R D R T S V R S I S F P A ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 1264 End: 1656 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M H R L S D T H R Q G M L V Q L V L G N H Q F C Q R R R L G N D A K R Q R S G S F C L V D D R Q T R Q N L R T Q Y L V S ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 43 Strand: + Start: 1676 End: 1804 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R T D F S S I V F I K A S P C G N T P Y S F C M S C I F I A I I A F R Q T V G F L F ................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 1443 End: 1847 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M H R A D H I S P P C D T K R G K T T P Q Q S A P A Y F R A W Q L F S N R C R N S P L R R C R S V R K A L F F A I V S L ...................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 56 Strand: + Start: 1744 End: 1911 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Y V L Y I H R N H C V P T N R R I S F L K Y K G T T F T L Y I V C F E L K N L D P T P P F V Y C L F F K R Q K ...................................................................................................................................................................................................................................................................................... Protein_Len: 54 Strand: + Start: 1878 End: 2039 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R L L L V F Q T S E V K N W K V P T F Y K K S T D V F I K K Y G R F L E K V R T F F L E S T Y V F I L L S ...................................................................................................................................................... Protein_Len: 32 Strand: + Start: 2020 End: 2115 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M F L F Y C R K S G V K K V V Q R A Q K H Y F L T D F Q L K A K .......................................................................... Protein_Len: 56 Strand: - Start: 2021 End: 2188 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... T K I K N D Y F R H L F P Q E F P V F A S N K L L N E V S L W I T V L M R A L C Y M A F Y F L K S C I R F Y I M . Protein_Len: 38 Strand: - Start: 1908 End: 2021 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... F Y L I P F Y R C E I F F T R V N E Y F L V S T K E F F Y P C K K Q F T G M ........................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 1523 End: 1822 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. H C F G I I R S S F G H S G V K R G N N E D F C R G T A V S W I T E T H R T Y E D C D N R E S L G D S K K K S T C L Y M ............................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 58 Strand: - Start: 1287 End: 1460 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L C P I S T W S T S P L W W N Q W R R L S P L S A F L C R L P L K Q R T S S R C V R C F R R V C Y R T E Q M A S V M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1259 End: 1462 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... E C V L Y A R G V Q A Q C G G I R G V G F A R Y R H L S A V F R Y S K G R Q H G V F A V S G G Y A T D R K R C R A S W M ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: - Start: 1110 End: 1211 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T A S F T S V I L C N A R F P I S M S F A A V C P L S G Q S T C M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 50 Strand: - Start: 923 End: 1072 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L H T R Y Y R S Y V A F G E N R S C F R E A S V A L F T N E R R E I Y G I G A C D G G K R E Q R E M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 35 Strand: - Start: 663 End: 767 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H S R L C S L T R T F S H N H R F I L V Y L R R A K R T R Q V T R V M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 30 Strand: - Start: 575 End: 664 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Q R I Y R A F A N N T E R Q R C S Y L T Q I R A A S L R E M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 47 Strand: - Start: 513 End: 653 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ P C L P S I T Q W L P R K P K A T Q G R V T S Y I A C V R Q K N R A T P L F I S N T D K C C M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 33 Strand: - Start: 179 End: 277 .................................................................................................................................................................................. R C P S I Q Q N Q L A F P Y F R G C Y R Q A S V G L T D N G S L M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 57 Strand: - Start: 78 End: 248 ............................................................................. T A L L I R S A N R R R K R S D T G R E R A L F L F V H H L M A V I P V A I N A S K T S R I S L F T W L I T T S M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 44 Strand: - Start: 2 End: 133 . I R A A Y V L R A L L F L G K R P T T E C L A K D L R S C Y G Q H T E E G K G Q T Q G M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 1 End: 1773 L M T K Q W R K V I S A F F M P T A S A L L G Q L F V T R V S K E E M T K M L A D G Q P L V G Y L K Q I D Q I N M A I M ................................................................................................................................................................................................................................................................................................................................................................................................................................ taattcgtgctgcataaacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taattcgtgctgcataaacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 77 HP_score: -7.2 Tail_Score: -4.38748 Start: 588 End: 599 Full_Region: TACTGTCGAATATAT CGCG CAAA CGCG TTGTTTGTTTCTCGC ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCAAACGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 87 HP_score: -8.0 Tail_Score: -5.05153 Start: 1779 End: 1795 Full_Region: TCGCAATCATTGCGT TCCGAC AAACC GTCGGA TTTCTTTTTTGAAGT ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACAAACCGTCGGA.......................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 86 HP_score: -2.1 Tail_Score: -5.626 Start: 1948 End: 1977 Full_Region: ctttttcgagaaaac gtccgtacttttt tatg aaaacgtccgtac tttttttatagaatg ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gtccgtacttttttatgaaaacgtccgtac.................................................................................................................................................................................................................... TransTerm Strand: - Conf: 74 HP_score: -2.1 Tail_Score: -5.24129 Start: 1970 End: 1999 Full_Region: ctttccagaaaaaat gtccgtacttttt cgag aaaacgtccgtac ttttttatgaaaacg .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gtccgtactttttcgagaaaacgtccgtac.............................................................................................................................................................................................. Find igs database================================================ Query_seq: PI1572:PI1574|PI1572:PI1574:hypothetical protein:conserved hypothetical protein:->->:1498276..1500464 2189 taattcgtgctgcataaacgannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Intra-Species Hit: Count: 1 Min: 1831 Max: 2189 Len: 359 Subject: pint_PI1572_PI1574|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1498276,1500464]|2189 HSP 1 e-value: 0.0 bit: 670.0 Len: 359 Query Start:1831 Query End:2189 Subject Strand: POSITIVE Subject Start: 1831 Subject End: 2189 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctatnnnnnnngtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatatatagtctgctttgaactgaagaatttagacccgactccaccattcgtttattgcttgtttttcaaacgtcagaagtaaagaattggaaagtacctacattctataaaaaaagtacggacgttttcataaaaaagtacggacgttttctcgaaaaagtacggacattttttctggaaagtacctatgtttttattttattgtcgtaaaagcggtgtaaaaaaggttgttcaaagggcacaaaagcactattttttaacagattttcaactgaaagccaaatagttacaagcattctcgccaagcaatacatagcaaaataaaacagcttcgagcaaatacggaaatatattatc Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUAUAUAUAGUCUGCUUUGAACUGAAGAAUUUAGACCCGACUCCACCAUUCGUUUAUUGCUUGUUUUUCAAACGUCAGAAGUAAAGAAUUGGAAAGUACCUACAUUCUAUAAAAAAAGUACGGACGUUUUCAUAAAAAAGUACGGACGUUUUCUCGAAAAAGUACGGACAUUUUUUCUGGAAAGUACCUAUGUUUUUAUUUUAUUGUCGUAAAAGCGGUGUAAAAAAGGUUGUUCAAAGGGCACAAAAGCACUAUUUUUUAACAGAUUUUCAACUGAAAGCCAAAUAGUUACAAGCAUUCUCGCCAAGCAAUACAUAGCAAAAUAAAACAGCUUCGAGCAAAUACGGAAAUAUAUUAUC .(((((..((((.(.((((((........)))))).).))))......(((((...(((((((......(((((((....(((......(((((.((....)).))))).........))).)))))))...........((((..((((((..(((.((((((..(((((.....((....)).....)))))..))))))....)))..)))))).))))....((((((((.....(((......(((((((((.....(((........)))......))))))).....))......)))..((........)).......)))))))))))))))..))))).)))))..... (-65.36) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GAUAAUAUAUUUCCGUAUUUGCUCGAAGCUGUUUUAUUUUGCUAUGUAUUGCUUGGCGAGAAUGCUUGUAACUAUUUGGCUUUCAGUUGAAAAUCUGUUAAAAAAUAGUGCUUUUGUGCCCUUUGAACAACCUUUUUUACACCGCUUUUACGACAAUAAAAUAAAAACAUAGGUACUUUCCAGAAAAAAUGUCCGUACUUUUUCGAGAAAACGUCCGUACUUUUUUAUGAAAACGUCCGUACUUUUUUUAUAGAAUGUAGGUACUUUCCAAUUCUUUACUUCUGACGUUUGAAAAACAAGCAAUAAACGAAUGGUGGAGUCGGGUCUAAAUUCUUCAGUUCAAAGCAGACUAUAUAUAA ....((((((.((.......((.((((((.......((((((((.(.....).)))))))).........(((((((......(((.(....).))).....))))))))).)))).)).((((((((.......((((..(((.((((((................((.(((((.......(((((((.((.((.((.((((((.(((((.((....)).))))).)))))).)).)).)))))))))..(((((...((......)).))))).))))).))..(((((.....)))))............)))))).)))...)))).......))))))))..))..)))))).. (-63.44) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 324 60 11 188 136 pint:PI1298|5end_glycosyltransferase_1211184..1211414_POSITIVE 311 339 295 165 116 pint:PI1806|5end_integral_membrane_transport_protein;_possible_sugar_transport_proteins_1740777..1741007_POSITIVE 287 336 292 121 76 pint:PI1222|5end_hypothetical_protein_1142834..1143064_POSITIVE 284 306 263 62 22 pint:PI1115|5end_conserved_hypothetical_protein_1039244..1039474_POSITIVE 271 250 204 162 119 pint:PI0737|5end_hypothetical_protein_671182..671412_POSITIVE 269 245 204 81 39 pint:PI2158|5end_glycosyl_transferase,_group_2_family_protein_2104392..2104622_POSITIVE 262 58 11 231 181 pint:PI0397|5end_conserved_hypothetical_protein_362406..362636_POSITIVE 261 243 201 208 166 pint:PI0416|5end_hypothetical_protein_386394..386624_POSITIVE 254 320 274 60 18 pint:PI1887|5end_cell_division_protein_1829115..1829345_POSITIVE 254 319 273 140 101 pint:PI1381|5end_conserved_hypothetical_protein_1303060..1303290_POSITIVE 252 55 11 78 18 pint:PI0003|5end_pseudouridylate_synthase_4270..4500_POSITIVE 250 184 143 49 7 pint:PI2035|5end_Holliday_junction_DNA_helicase_ruvB_1988212..1988442_POSITIVE 247 320 277 90 47 pint:PI0532|5end_ABC_transporter,_ATP-binding/permease_protein_486263..486493_POSITIVE 246 250 207 57 25 pint:PI0708|5end_conserved_hypothetical_protein_644475..644705_POSITIVE 246 67 29 179 142 pint:PI0033|5end_peptidylprolyl_isomerase_36215..36445_POSITIVE 246 67 29 49 12 pint:PI0032|5end_hypothetical_protein_36085..36315_POSITIVE 245 47 10 224 179 pint:PI1707|5end_GTP-binding_protein_1623795..1624025_POSITIVE 244 69 23 139 92 pint:PI0938|5end_hypothetical_protein_869345..869575_POSITIVE 243 340 291 197 151 pint:PI0188|5end_phosphomethylpyrimidine_kinase_178433..178663_POSITIVE 241 60 12 179 108 pint:PI2171|5end_conserved_hypothetical_protein_2112735..2112965_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 290 347 310 52 8 pint:PI2166|3end_hypothetical_protein_2112073..2112223_POSITIVE 287 336 292 62 17 pint:PI1221|3end_penicillin-binding_protein_1A_1142855..1143005_POSITIVE 269 245 204 66 24 pint:PI2157|3end_xanthosine_triphosphate_pyrophosphatase,_HAM1_family_2104457..2104607_POSITIVE 262 58 11 141 91 pint:PI0396|3end_possible_tetracycline_resistance_element_mobilization_regulatory_protein,_C-terminal_fragment_362396..362546_POSITIVE 252 250 202 82 28 pint:PI0003|3end_pseudouridylate_synthase_6044..6194_POSITIVE 246 67 29 138 101 pint:PI0032|3end_hypothetical_protein_36254..36404_POSITIVE 245 306 261 79 38 pint:PI0130|3end_hypothetical_protein_122267..122417_POSITIVE 244 255 213 88 45 pint:PI1414|3end_conserved_hypothetical_protein_1334436..1334586_POSITIVE 242 254 215 42 4 pint:PI1924|3end_cytidine_deaminase_1866495..1866645_POSITIVE 242 78 34 54 2 pint:PI1706|3end_GTP-binding_protein_1623668..1623818_POSITIVE 241 82 42 91 52 pint:PI2103|3end_hypothetical_protein_2057934..2058084_POSITIVE 240 253 215 86 57 pint:PI2171|3end_conserved_hypothetical_protein_2113831..2113981_POSITIVE 238 59 12 135 81 pint:PI2170|3end_RNA_polymerase_sigma-70_factor,_ECF_subfamily_2112788..2112938_POSITIVE 237 242 206 68 42 pint:PI1749|3end_conserved_hypothetical_protein_1671637..1671787_POSITIVE 236 290 241 59 13 pint:PI1603|3end_hypothetical_protein_1534005..1534155_POSITIVE 235 320 275 138 92 pint:PI1237|3end_ATP-dependent_DNA_helicase_1161480..1161630_POSITIVE 234 256 216 42 4 pint:PI1014|3end_prismane_protein,_hybrid-cluster_protein_936132..936282_POSITIVE 234 189 142 79 27 pint:PI0734|3end_ABC_transporter,_ATP-binding_/_permease_668760..668910_POSITIVE 233 168 122 149 92 pint:PI0790|3end_hypothetical_protein_729206..729356_POSITIVE 232 60 16 146 99 pint:PI0540|3end_conserved_hypothetical_protein_493865..494015_POSITIVE