Origin IGS: tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taatcaatcacattattaatataaagacgatatgaaagggaaagacgatgccgccttgaatgcttcaagacagcatcgtttttgcgtatatggacatctgtaaaatgagtattagatgaaatctgataatgaacaatagagttttatttaggaaacaatttcctttttgtcgcttaaggcaaatattggaaattacctctgactttgtaaagataattctgatgaaaaatgataatttcgatttggcattgcgaaagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgatatttagtaatttagatgacacatgcgtttgtgaaaaatgtttacaatcctataatgctctttttgttcataaagtaagctgtttttatagaattatcaccgcctctttgttatcaatattcaacagctgcaaagttctgtactttcattacaatgaacctgcaagcttgctttagtcggcatcaaataattctattatgggctttataaaactgaaaaaaaacgtaataataaaccacaaatgtagtgtaatggttttgtttttaaaaaaataacattatctttgcacgcaagtaatatttttactttaaacgctacaactcatgaaaacagaagaacaaaaatatagcaataatttaaataaaaagaaaaca Mask Tandem Repeat Region ================================================ tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Find is-nt database================================================ Query_seq: PI1563:PI1564|PI1563:PI1564:thiol:disulfide interchange protein dsbD:surface antigen BspA:->->:1482876..1483594 719 tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI1563:PI1564|PI1563:PI1564:thiol:disulfide interchange protein dsbD:surface antigen BspA:->->:1482876..1483594 719 tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI1563:PI1564|PI1563:PI1564:thiol:disulfide interchange protein dsbD:surface antigen BspA:->->:1482876..1483594 719 tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Predict ORF larger than 30AA ================================================ Protein_Len: 31 Strand: + Start: 75 End: 167 .......................................................................... M L L A C K D N V I F L K T K P L H Y I C G L L L R F F S V L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 32 Strand: + Start: 448 End: 543 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................... M A K Q P L S Q C Q I E I I I F H Q N Y L Y K V R G N F Q Y L P ................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 353 End: 652 ................................................................................................................................................................................................................................................................................................................................................................ M S S K L L N I N A L Q N L L F C I P K A A V L H G K S V G F A S Q N S R F R N A K S K L S F F I R I I F T K S E V I S ................................................................... Protein_Len: 45 Strand: + Start: 583 End: 717 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M V H Y Q I S S N T H F T D V H I R K N D A V L K H S R R H R L S L S Y R L Y I N N V I D .. Protein_Len: 38 Strand: - Start: 378 End: 491 ......................................................................................................................................................................................................................................................................................................................................................................................... R M V F G I T K C E L L P Q K A R Y F R L N Q M A F C G S E C H W I S I I M .................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 202 End: 597 ......................................................................................................................................................................................................... T K C P L L T P K A D C F L R K R L A L D F N D N K M L I I K V F D S T I E L I Q R L R C F P F Q K R F L V R N N M I M .......................................................................................................................... Protein_Len: 40 Strand: - Start: 168 End: 287 ....................................................................................................................................................................... L A W L L I I Q H R S F C A Q L N M T I F T C F K A A T S Y Q Y C L P P S L E M ................................................................................................................................................................................................................................................................................................................................................................................................................................................ tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 81 Start: 22 End: 51 .....................ATTGCTATATTTTTGTTCTTCTGTTTTCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ PromScan Matrix: RpoD-17 Strand: - Score: 81 Start: 143 End: 172 ..............................................................................................................................................CTTTATAAAACTGAAAAAAAACGTAATAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 40 HP_score: -2.5 Tail_Score: -2.68259 Start: 328 End: 346 Full_Region: agatgacacatgcgt ttgtgaa aaatg tttacaa tcctataatgctctt .......................................................................................................................................................................................................................................................................................................................................ttgtgaaaaatgtttacaa..................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 40 HP_score: -2.4 Tail_Score: -2.67209 Start: 342 End: 355 Full_Region: ATTGTAAACATTTTT CACA AACGCA TGTG TCATCTAAATTACTA .....................................................................................................................................................................................................................................................................................................................................................CACAAACGCATGTG............................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 100 HP_score: -14.8 Tail_Score: -3.57144 Start: 413 End: 463 Full_Region: TTTTGCATTCCAAAA GCGGCTGTTTTGCACGGTAAAAGC GTA GGTTTTGCATCGCAAAACAGCCGC TTTCGCAATGCCAAA ............................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCTGTTTTGCACGGTAAAAGCGTAGGTTTTGCATCGCAAAACAGCCGC................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 100 HP_score: -14.8 Tail_Score: -4.13767 Start: 413 End: 463 Full_Region: tttggcattgcgaaa gcggctgttttgcgatgcaaaacc tac gcttttaccgtgcaaaacagccgc ttttggaatgcaaaa ............................................................................................................................................................................................................................................................................................................................................................................................................................gcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgc................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 80 HP_score: -6.3 Tail_Score: -4.91712 Start: 557 End: 569 Full_Region: atagagttttattta ggaaa caa tttcc tttttgtcgcttaag ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggaaacaatttcc...................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -13.3 Tail_Score: -3.89334 Start: 634 End: 682 Full_Region: ACAGATGTCCATATA CGCAAAAACGATGCTGTCTTGAA GCA TTCAAGGCGGCATCGTCTTTCCC TTTCATATCGTCTTT .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAAAACGATGCTGTCTTGAAGCATTCAAGGCGGCATCGTCTTTCCC..................................... TransTerm Strand: + Conf: 100 HP_score: -15.3 Tail_Score: -3.8822 Start: 640 End: 676 Full_Region: GTCCATATACGCAAA AACGATGCTGTCTTGAA GCA TTCAAGGCGGCATCGTC TTTCCCTTTCATATC ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATGCTGTCTTGAAGCATTCAAGGCGGCATCGTC........................................... TransTerm Strand: + Conf: 100 HP_score: -17.9 Tail_Score: -3.51904 Start: 642 End: 674 Full_Region: CCATATACGCAAAAA CGATGCTGTCTTGAA GCA TTCAAGGCGGCATCG TCTTTCCCTTTCATA .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGCTGTCTTGAAGCATTCAAGGCGGCATCG............................................. TransTerm Strand: - Conf: 100 HP_score: -13.5 Tail_Score: -4.72846 Start: 642 End: 674 Full_Region: tatgaaagggaaaga cgatgccgccttgaa tgc ttcaagacagcatcg tttttgcgtatatgg .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgatgccgccttgaatgcttcaagacagcatcg............................................. Find igs database================================================ Query_seq: PI1563:PI1564|PI1563:PI1564:thiol:disulfide interchange protein dsbD:surface antigen BspA:->->:1482876..1483594 719 tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Intra-Species Hit: Count: 60 Min: 1 Max: 719 Len: 719 Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 0.0 bit: 1336.0 Len: 719 Query Start:1 Query End:719 Subject Strand: POSITIVE Subject Start: 1 Subject End: 719 tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttannnnnnnaaaaacaaaaccattacactacatttgtggtttattattacgnnnnnnnncagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta tgttttctttttatttaaattattgctatatttttgttcttctgttttcatgagttgtagcgtttaaagtaaaaatattacttgcgtgcaaagataatgttatttttttaaaaacaaaaccattacactacatttgtggtttattattacgttttttttcagttttataaagcccataatagaattatttgatgccgactaaagcaagcttgcaggttcattgtaatgaaagtacagaactttgcagctgttgaatattgataacaaagaggcggtgataattctataaaaacagcttactttatgaacaaaaagagcattataggattgtaaacatttttcacaaacgcatgtgtcatctaaattactaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggtaatttccaatatttgccttaagcgacaaaaaggaaattgtttcctaaataaaactctattgttcattatcagatttcatctaatactcattttacagatgtccatatacgcaaaaacgatgctgtcttgaagcattcaaggcggcatcgtctttccctttcatatcgtctttatattaataatgtgattgatta Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 8.0E-58 bit: 226.0 Len: 146 Query Start:373 Query End:518 Subject Strand: NEGATIVE Subject Start: 478 Subject End: 623 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagt......................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcatggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgccaaagcgcagttatcactttttaacagaattatctttacaaagt......................................................................................................................................................................................................... Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 8.0E-55 bit: 216.0 Len: 145 Query Start:372 Query End:516 Subject Strand: NEGATIVE Subject Start: 216 Subject End: 360 ...................................................................................................................................................................................................................................................................................................................................................................................atatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................atatcaacgtattgtaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttcagcgaaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 3.0E-54 bit: 214.0 Len: 144 Query Start:373 Query End:516 Subject Strand: NEGATIVE Subject Start: 114 Subject End: 257 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaatcgaaattaccatttttcaaagaaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 3.0E-54 bit: 214.0 Len: 144 Query Start:373 Query End:516 Subject Strand: NEGATIVE Subject Start: 11 Subject End: 154 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccactttcgcaacgtcaaatcgaaattatcatttttcttcggaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 3.0E-51 bit: 204.0 Len: 143 Query Start:374 Query End:516 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 254 .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgcattataaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcagtttttaacagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 2.0E-49 bit: 198.0 Len: 144 Query Start:373 Query End:516 Subject Strand: POSITIVE Subject Start: 83 Subject End: 226 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaatgcattgcaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaatgccaaagcgcagttatcagtttttaacagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 8.0E-49 bit: 196.0 Len: 135 Query Start:382 Query End:516 Subject Strand: NEGATIVE Subject Start: 147 Subject End: 281 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcattttttaagagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 138 Query Start:379 Query End:516 Subject Strand: NEGATIVE Subject Start: 167 Subject End: 304 ..........................................................................................................................................................................................................................................................................................................................................................................................cgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................................................................cgcattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaacagccgctttcgcaatgtcaaaacgcagttatcaatttttaagagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 122 Query Start:373 Query End:494 Subject Strand: POSITIVE Subject Start: 74 Subject End: 195 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttt................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgtgttgcaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaatcgaaattaccatttt................................................................................................................................................................................................................................. Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 5.0E-47 bit: 190.0 Len: 144 Query Start:373 Query End:516 Subject Strand: POSITIVE Subject Start: 138 Subject End: 281 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgccttacaaaacctattgttttacgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 5.0E-47 bit: 190.0 Len: 144 Query Start:373 Query End:516 Subject Strand: POSITIVE Subject Start: 27 Subject End: 170 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 7.0E-46 bit: 186.0 Len: 142 Query Start:374 Query End:515 Subject Strand: NEGATIVE Subject Start: 170 Subject End: 311 .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaa............................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................................................................................atcagcgcattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaatgcaaaagagccgctttcgcaatgccaaagcgcagttatcactttttaacggaattatctttacaa............................................................................................................................................................................................................ Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 3.0E-45 bit: 184.0 Len: 145 Query Start:373 Query End:517 Subject Strand: NEGATIVE Subject Start: 309 Subject End: 453 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaag.......................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaagacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaaagaaattatctttacaaag.......................................................................................................................................................................................................... Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 144 Query Start:373 Query End:516 Subject Strand: POSITIVE Subject Start: 397 Subject End: 540 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgtgttacaaaacctattgttttgcattccaaaagcggctgttttgcacggcaaaagcgtaggttttacctcgcaaaacagccgctttcgcaacgtcaaaacgaaattatcaattttcaatgtaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 136 Query Start:383 Query End:518 Subject Strand: NEGATIVE Subject Start: 147 Subject End: 282 ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagt......................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcggttatcactttttaacggaattatctttacaaagt......................................................................................................................................................................................................... Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 5.0E-44 bit: 180.0 Len: 143 Query Start:374 Query End:516 Subject Strand: POSITIVE Subject Start: 82 Subject End: 224 .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgtattacaaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcatcgtaaaagagccgctttcgcaacgtcaaagcgcagttatcagtttttaacagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 5.0E-44 bit: 180.0 Len: 135 Query Start:383 Query End:517 Subject Strand: NEGATIVE Subject Start: 59 Subject End: 193 ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaag.......................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattctaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttgtcactttttaacagaattatctttacaaag.......................................................................................................................................................................................................... Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 5.0E-44 bit: 180.0 Len: 135 Query Start:383 Query End:517 Subject Strand: POSITIVE Subject Start: 251 Subject End: 385 ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaag.......................................................................................................................................................................................................... ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcgttccaaaagtggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcactttttaagagaattatctttacaaag.......................................................................................................................................................................................................... Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 5.0E-44 bit: 180.0 Len: 135 Query Start:382 Query End:516 Subject Strand: NEGATIVE Subject Start: 51 Subject End: 185 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttatcactttttaacggaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386 HSP 1 e-value: 2.0E-43 bit: 178.0 Len: 138 Query Start:382 Query End:519 Subject Strand: NEGATIVE Subject Start: 212 Subject End: 349 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtc........................................................................................................................................................................................................ .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcatcgtcaaaacgcagttatcactttttaagagaataatctttacaaagtc........................................................................................................................................................................................................ Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 3.0E-42 bit: 174.0 Len: 132 Query Start:387 Query End:518 Subject Strand: NEGATIVE Subject Start: 198 Subject End: 329 ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagt......................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcgttccaaaaacggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaacggaattatctttacaaagt......................................................................................................................................................................................................... Subject: pint_PI0694_PI0695|Na+/dicarboxylate or sulfate symporter:xanthine/uracil permease family protein|POSITIVE:POSITIVE|[631238,631552]|315 HSP 1 e-value: 3.0E-42 bit: 174.0 Len: 144 Query Start:373 Query End:516 Subject Strand: NEGATIVE Subject Start: 89 Subject End: 232 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacactttgcaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcagtgtcaaatcgaaattaccgttttccgtcggaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 115 Query Start:380 Query End:494 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 292 ...........................................................................................................................................................................................................................................................................................................................................................................................gcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttt................................................................................................................................................................................................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................gcattataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagcagctttcgcaacgtcaaatcgaaattatcgtttt................................................................................................................................................................................................................................. Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 131 Query Start:386 Query End:516 Subject Strand: POSITIVE Subject Start: 97 Subject End: 227 .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgtcaaaacgcagttatcagtttttaacagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 143 Query Start:374 Query End:516 Subject Strand: NEGATIVE Subject Start: 186 Subject End: 328 .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgccttacaaaacctattgtttcgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcacaaaagagccgctttcgcaacgccaaagcgcagttatcaatttttaagagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 131 Query Start:386 Query End:516 Subject Strand: POSITIVE Subject Start: 304 Subject End: 434 .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaacgtcaaagcgcagttatcactttttaagagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 1.0E-41 bit: 172.0 Len: 131 Query Start:386 Query End:516 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 245 .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacgctaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcgctttttaacagaataatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1577_PI1578|conserved hypothetical protein:rod shape-determining protein|POSITIVE:POSITIVE|[1503940,1504327]|388 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 102 Query Start:387 Query End:488 Subject Strand: NEGATIVE Subject Start: 98 Subject End: 199 ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattat....................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaacgtcaaatcgaaattat....................................................................................................................................................................................................................................... Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 4.0E-41 bit: 170.0 Len: 114 Query Start:375 Query End:488 Subject Strand: NEGATIVE Subject Start: 120 Subject End: 233 ......................................................................................................................................................................................................................................................................................................................................................................................tcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattat....................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................tcaacgtattgcaaaacctattgttttgcactccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgttttcgcaatgtcaaatcgaaattat....................................................................................................................................................................................................................................... Subject: pint_PI1408_PI1409|glucose-1-phosphate thymidylyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1329822,1330988]|1167 HSP 1 e-value: 7.0E-40 bit: 167.0 Len: 136 Query Start:381 Query End:516 Subject Strand: POSITIVE Subject Start: 691 Subject End: 826 ............................................................................................................................................................................................................................................................................................................................................................................................cattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................cattacaaaacctattgttttgtattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagtacagttatcactttttaacagaattatttttacaaa........................................................................................................................................................................................................... Subject: pint_PI1803_PI1804|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1737852,1738248]|397 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 130 Query Start:387 Query End:516 Subject Strand: NEGATIVE Subject Start: 267 Subject End: 396 ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattgtaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaatgccaaatcgaaattaccgttttctttcggaataatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 142 Query Start:375 Query End:516 Subject Strand: POSITIVE Subject Start: 45 Subject End: 186 ......................................................................................................................................................................................................................................................................................................................................................................................tcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................tcaacgctttacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgctgcaaaacagccgctttcgcaacgccaaatcgaaattaccgtttttcgtcggaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 2.0E-37 bit: 159.0 Len: 144 Query Start:373 Query End:516 Subject Strand: POSITIVE Subject Start: 93 Subject End: 236 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacacattgcaaaacctattgttttgcattccaaaagcgtaggttttacacggcaaaagcggctgttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcttacgaataatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 2.0E-37 bit: 159.0 Len: 144 Query Start:373 Query End:516 Subject Strand: NEGATIVE Subject Start: 80 Subject End: 223 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacacattacaaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcatcgcaaaacagccgctttcgcaatgccaaagcgcaattaccacttttcaacgaaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 1.0E-35 bit: 153.0 Len: 141 Query Start:376 Query End:516 Subject Strand: NEGATIVE Subject Start: 202 Subject End: 341 .......................................................................................................................................................................................................................................................................................................................................................................................caacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................caacgcattacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgc-aaacagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI2056_PI2057|conserved hypothetical protein:conserved hypothetical protein; possible metal-dependent membrane protease|POSITIVE:POSITIVE|[2014489,2015078]|590 HSP 1 e-value: 2.0E-34 bit: 149.0 Len: 107 Query Start:382 Query End:488 Subject Strand: NEGATIVE Subject Start: 370 Subject End: 476 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattat....................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgtttcgcattccaaaagcggctgttttgcatggtaaaagcgtaagttttgcattacaaaagagccgctttcgcaacgtcaaatcgaaattat....................................................................................................................................................................................................................................... Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 6.0E-34 bit: 147.0 Len: 130 Query Start:387 Query End:516 Subject Strand: POSITIVE Subject Start: 111 Subject End: 240 ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaacgtcaaagcgcagttatcgctttttaacggaattatttttacaaa........................................................................................................................................................................................................... Subject: pint_PI1915_PI1916|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1859967,1860350]|384 HSP 1 e-value: 2.0E-33 bit: 145.0 Len: 136 Query Start:381 Query End:516 Subject Strand: NEGATIVE Subject Start: 115 Subject End: 250 ............................................................................................................................................................................................................................................................................................................................................................................................cattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtagg-ttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................cattataaaacctattgttttgcattccaaaagcggctgttttgcaacgtaaaa-catacgcttttaccgtgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttcgtcagaattatttttacaaa........................................................................................................................................................................................................... HSP 2 e-value: 3.0E-14 bit: 81.8 Len: 57 Query Start:410 Query End:466 Subject Strand: POSITIVE Subject Start: 165 Subject End: 221 .........................................................................................................................................................................................................................................................................................................................................................................................................................aaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgcttt............................................................................................................................................................................................................................................................. .........................................................................................................................................................................................................................................................................................................................................................................................................................aaagcggctgttttgcacggtaaaagcgtatgttttacgttgcaaaacagccgcttt............................................................................................................................................................................................................................................................. Subject: pint_PI0195_PI0196|epimerase/reductase:hypothetical protein|POSITIVE:POSITIVE|[188263,188574]|312 HSP 1 e-value: 2.0E-33 bit: 145.0 Len: 113 Query Start:382 Query End:494 Subject Strand: NEGATIVE Subject Start: 168 Subject End: 280 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttt................................................................................................................................................................................................................................. .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaattgtcatttt................................................................................................................................................................................................................................. Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 1.0E-32 bit: 143.0 Len: 112 Query Start:383 Query End:494 Subject Strand: POSITIVE Subject Start: 328 Subject End: 439 ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttt................................................................................................................................................................................................................................. ..............................................................................................................................................................................................................................................................................................................................................................................................ttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgtttt................................................................................................................................................................................................................................. Subject: pint_PI1688_PI1689|possible GTPase:conserved hypothetical protein|POSITIVE:POSITIVE|[1603964,1604449]|486 HSP 1 e-value: 9.0E-30 bit: 133.0 Len: 139 Query Start:387 Query End:525 Subject Strand: POSITIVE Subject Start: 174 Subject End: 312 ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaagtcagaggt.................................................................................................................................................................................................. ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattgtaaaagcgtaggttttgcacggtaaaagcggctcttttgcatcgcaaaacatacgctttcgcaacgtcaaatcgaaattatcattttccctccgaattatctttacaaaatcaaaggt.................................................................................................................................................................................................. Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 9.0E-30 bit: 133.0 Len: 135 Query Start:382 Query End:516 Subject Strand: POSITIVE Subject Start: 228 Subject End: 361 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttca-atgaattatctttacaaa........................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:432 Query End:466 Subject Strand: NEGATIVE Subject Start: 278 Subject End: 312 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................aaagcgtaggttttgcatcgcaaaacagccgcttt............................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................aaagcgtaggttttgcaatgcaaaacagccgcttt............................................................................................................................................................................................................................................................. Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 1.0E-28 bit: 129.0 Len: 137 Query Start:380 Query End:516 Subject Strand: NEGATIVE Subject Start: 142 Subject End: 278 ...........................................................................................................................................................................................................................................................................................................................................................................................gcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................................................gcattataaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaagagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 6.0E-28 bit: 127.0 Len: 131 Query Start:386 Query End:516 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 275 .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatca-tttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................caaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctcttttgcaacgcaaaacctacgctttcgcaatgtcaaatcgaaattatcattttttcaac-gaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 6.0E-28 bit: 127.0 Len: 144 Query Start:373 Query End:516 Subject Strand: NEGATIVE Subject Start: 142 Subject End: 285 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcaatgcaaaacctattgttttgcattgtaaaagcgtaggttttacacggtcaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaattatcattttccttacgaattatccttacaaa........................................................................................................................................................................................................... Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 6.0E-28 bit: 127.0 Len: 124 Query Start:373 Query End:496 Subject Strand: NEGATIVE Subject Start: 762 Subject End: 885 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttc............................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacatattataaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgttgcaaaacctacgctttcgcaacgccaaatcgaaattatcatttttc............................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-8 bit: 61.9 Len: 35 Query Start:432 Query End:466 Subject Strand: POSITIVE Subject Start: 792 Subject End: 826 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................aaagcgtaggttttgcatcgcaaaacagccgcttt............................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................aaagcgtaggttttgcaacgcaaaacagccgcttt............................................................................................................................................................................................................................................................. Subject: pint_PI1981_PI1982|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1938199,1938578]|380 HSP 1 e-value: 2.0E-27 bit: 125.0 Len: 135 Query Start:382 Query End:516 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 279 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgaaatgcaaaacagccgctttcgcaatgtcaaaccgaaattgctgttttttatcagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1958_PI1959|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1917430,1917847]|418 HSP 1 e-value: 2.0E-27 bit: 125.0 Len: 135 Query Start:382 Query End:516 Subject Strand: NEGATIVE Subject Start: 183 Subject End: 317 .............................................................................................................................................................................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgcaatgcaaaacagccgcttttgcaatgtcaaaccgaaattgctgttttttatcagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1909_PI1910|DNA gyrase, B subunit:hypothetical protein|POSITIVE:POSITIVE|[1855331,1855917]|587 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 144 Query Start:373 Query End:516 Subject Strand: POSITIVE Subject Start: 333 Subject End: 476 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattgcaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagtggcgcttttgcatcgcaaaacctacgctttcgcaatgtcaaagcgcagttatcactttttaacaatgttatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1271_PI1272|transcriptional regulator, AraC/XylS family:possible transcriptional regulator|POSITIVE:POSITIVE|[1191345,1191841]|497 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 120 Query Start:398 Query End:517 Subject Strand: NEGATIVE Subject Start: 256 Subject End: 375 .............................................................................................................................................................................................................................................................................................................................................................................................................ttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaag.......................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................ttttgcgttccaaaagcggctgttttgtacggtaaaagcgtaggttttgcatcgcaaaagaaccgctttcgcaacgttaaagcgcagttatcactttttaacggaattatatttacaaag.......................................................................................................................................................................................................... Subject: pint_PI0652_PI0653|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[595853,596185]|333 HSP 1 e-value: 6.0E-25 bit: 117.0 Len: 143 Query Start:374 Query End:516 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 290 .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................atcagcgcattacaaaacctattgttttgcattccaaaagcgtaggttttgcaaggcaaaagagccgcttttggacggtaaaacctacactttcgcagtgccaaatcgaaattatcgtttttcttcagaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1441_PI1442|hypothetical protein:radical-activating enzyme (pyruvate-formate lyase-activating enzyme)|POSITIVE:POSITIVE|[1363734,1364088]|355 HSP 1 e-value: 8.0E-21 bit: 103.0 Len: 112 Query Start:373 Query End:484 Subject Strand: POSITIVE Subject Start: 72 Subject End: 183 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaa........................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgctttacaaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgctttcgcaacgtcaaatcgaaa........................................................................................................................................................................................................................................... Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 1.0E-19 bit: 99.6 Len: 142 Query Start:375 Query End:516 Subject Strand: NEGATIVE Subject Start: 192 Subject End: 333 ......................................................................................................................................................................................................................................................................................................................................................................................tcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................tcaatgcattacaaaatctattgttttgcgtcctaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgtaaaacagccgctttcgcaacgtcaaagtgcagttatcactttttaacgaaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 129 Query Start:387 Query End:515 Subject Strand: NEGATIVE Subject Start: 113 Subject End: 241 ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaa............................................................................................................................................................................................................ ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggttgttttgcatcgtaaaacagctgcttttgcaatgtcaaaaggcagttatcactttttaacggaattatttttacaa............................................................................................................................................................................................................ Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 145 Query Start:373 Query End:517 Subject Strand: POSITIVE Subject Start: 165 Subject End: 309 ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaag.......................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................tatcaacgctttgtaaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaacgtcaaagcgcagttgtcactttttaacggaattatctttacaaag.......................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:432 Query End:466 Subject Strand: NEGATIVE Subject Start: 224 Subject End: 258 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................aaagcgtaggttttgcatcgcaaaacagccgcttt............................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................aaagcgtaggttttgcaatgcaaaacagccgcttt............................................................................................................................................................................................................................................................. Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406 HSP 1 e-value: 8.0E-15 bit: 83.8 Len: 122 Query Start:395 Query End:516 Subject Strand: POSITIVE Subject Start: 199 Subject End: 320 ..........................................................................................................................................................................................................................................................................................................................................................................................................ttgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................................................................................ttgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcaacgcaaaacctacgctttcgcaatgccaaagcgcagttatccttttttaagggaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1324_PI1325|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1243086,1243554]|469 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 149 Query Start:367 Query End:515 Subject Strand: POSITIVE Subject Start: 242 Subject End: 390 ..............................................................................................................................................................................................................................................................................................................................................................................actaaatatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaa............................................................................................................................................................................................................ ..............................................................................................................................................................................................................................................................................................................................................................................actaattatcaacgaattacaaaacctattgttttacattgtaaaagcggctcttttaccagccaaaagcggctgttttgcgatgcaaaacagccgcttttacaatgccaaagtgcagttatcactttttaacagaattatttttacaa............................................................................................................................................................................................................ Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415 HSP 1 e-value: 1.0E-10 bit: 69.9 Len: 143 Query Start:374 Query End:516 Subject Strand: POSITIVE Subject Start: 166 Subject End: 308 .....................................................................................................................................................................................................................................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa........................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa........................................................................................................................................................................................................... Subject: pint_PI1728_PI1729|ATP-dependent Clp protease, proteolytic subunit:FKBP-type peptidyl-prolyl cis-trans isomerase, trigger factor|POSITIVE:POSITIVE|[1647719,1648555]|837 HSP 1 e-value: 7.0E-6 bit: 54.0 Len: 130 Query Start:387 Query End:516 Subject Strand: POSITIVE Subject Start: 416 Subject End: 545 ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttt-tcatcagaattatctttacaaa........................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................aaaacctattgtttcgcattgtaaaagagccgcttttgcacggtaaaagcggctcttttgccttgcaaaacctacgcttttgcaacgtcaaatcgaaattaccgttttctcaac-gaattatctttacaaa........................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UGUUUUCUUUUUAUUUAAAUUAUUGCUAUAUUUUUGUUCUUCUGUUUUCAUGAGUUGUAGCGUUUAAAGUAAAAAUAUUACUUGCGUGCAAAGAUAAUGUUAUUUUUUUAAAAACAAAACCAUUACACUACAUUUGUGGUUUAUUAUUACGUUUUUUUUCAGUUUUAUAAAGCCCAUAAUAGAAUUAUUUGAUGCCGACUAAAGCAAGCUUGCAGGUUCAUUGUAAUGAAAGUACAGAACUUUGCAGCUGUUGAAUAUUGAUAACAAAGAGGCGGUGAUAAUUCUAUAAAAACAGCUUACUUUAUGAACAAAAAGAGCAUUAUAGGAUUGUAAACAUUUUUCACAAACGCAUGUGUCAUCUAAAUUACUAAAUAUCAACGCAUUACAAAACCUAUUGUUUUGCAUUCCAAAAGCGGCUGUUUUGCACGGUAAAAGCGUAGGUUUUGCAUCGCAAAACAGCCGCUUUCGCAAUGCCAAAUCGAAAUUAUCAUUUUUCAUCAGAAUUAUCUUUACAAAGUCAGAGGUAAUUUCCAAUAUUUGCCUUAAGCGACAAAAAGGAAAUUGUUUCCUAAAUAAAACUCUAUUGUUCAUUAUCAGAUUUCAUCUAAUACUCAUUUUACAGAUGUCCAUAUACGCAAAAACGAUGCUGUCUUGAAGCAUUCAAGGCGGCAUCGUCUUUCCCUUUCAUAUCGUCUUUAUAUUAAUAAUGUGAUUGAUUA ......................((((((((....((..(.(((((....((((((((((.(((...((((((.....)))))))))))))..(((((((..........((((((........((.(((((....))))).)).......))))))....((((((((.....((...(((((((((((...((((......((((.(((.((((((((..((((.(....))))))))).))))))))))).....(((....)))...))))..))))))))))).......(((..((((........)))))))......)).(((((((.((..(((......(((((((........................(((..((((......))))..)))......((((((((((((((((...((((((.(...).))))))...))))))))))))))))))).))))......((((........))))....)))..)).))))))).....((..((((((((.....((((.....))))......))))))))..))....))))))))........)))))))..............))))))...))))).)..)))))).))))..(((((((((((((((.....)))))))))))))))......(..((((((..(..........)..))))))..).... (-169.66) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAUCAAUCACAUUAUUAAUAUAAAGACGAUAUGAAAGGGAAAGACGAUGCCGCCUUGAAUGCUUCAAGACAGCAUCGUUUUUGCGUAUAUGGACAUCUGUAAAAUGAGUAUUAGAUGAAAUCUGAUAAUGAACAAUAGAGUUUUAUUUAGGAAACAAUUUCCUUUUUGUCGCUUAAGGCAAAUAUUGGAAAUUACCUCUGACUUUGUAAAGAUAAUUCUGAUGAAAAAUGAUAAUUUCGAUUUGGCAUUGCGAAAGCGGCUGUUUUGCGAUGCAAAACCUACGCUUUUACCGUGCAAAACAGCCGCUUUUGGAAUGCAAAACAAUAGGUUUUGUAAUGCGUUGAUAUUUAGUAAUUUAGAUGACACAUGCGUUUGUGAAAAAUGUUUACAAUCCUAUAAUGCUCUUUUUGUUCAUAAAGUAAGCUGUUUUUAUAGAAUUAUCACCGCCUCUUUGUUAUCAAUAUUCAACAGCUGCAAAGUUCUGUACUUUCAUUACAAUGAACCUGCAAGCUUGCUUUAGUCGGCAUCAAAUAAUUCUAUUAUGGGCUUUAUAAAACUGAAAAAAAACGUAAUAAUAAACCACAAAUGUAGUGUAAUGGUUUUGUUUUUAAAAAAAUAACAUUAUCUUUGCACGCAAGUAAUAUUUUUACUUUAAACGCUACAACUCAUGAAAACAGAAGAACAAAAAUAUAGCAAUAAUUUAAAUAAAAAGAAAACA ...........((((((..((((....(.(((((....(.(((((((((((.(.(((((.....))))).).))))))))))).).))))).)...(((((...(((((((((((((...))))))).((((((((.(((((.(((..(((((...(((((((..((((((......))))))....)))))))..........(((((((.((....(((.((.....(((.....))).....(((((.(((((((((((((((((((....((((.......))))....))))))))))))))))))).)))))....)).))).(((..((((((((((.(((((((....))))))).)).))))).)))..))).)).))))))))))))))).)))))..))))))))...(((.((.((((..((((((((((....(((...(((((..........)))))..((((.(((.((((..(((((....)))))..))))))))))).......))).....))))))))))...)))).....................((((.((((.....((((.(((((((.((..(((((....)))))..)).))))))).)))).((....))..)))).)))).......))))).))))))....)))))..........))))..)))))).................. (-176.10) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 964 470 421 80 31 pint:PI1204|5end_hypothetical_protein_1124430..1124660_POSITIVE 960 470 421 62 13 pint:PI0638|5end_hypothetical_protein_582218..582448_POSITIVE 935 450 401 197 148 pint:PI2046|5end_hypothetical_protein_1999030..1999260_POSITIVE 909 470 421 231 182 pint:PI0887|5end_hypothetical_protein_817536..817766_POSITIVE 909 470 421 124 75 pint:PI0867|5end_hypothetical_protein_803859..804089_POSITIVE 909 470 421 124 75 pint:PI0119|5end_hypothetical_protein_111506..111736_POSITIVE 909 470 421 65 16 pint:PI0089|5end_hypothetical_protein_88162..88392_POSITIVE 908 440 391 214 165 pint:PI1333|5end_conserved_hypothetical_protein_1250777..1251007_POSITIVE 907 440 391 187 138 pint:PI0024|5end_hypothetical_protein_28378..28608_POSITIVE 851 440 391 227 178 pint:PI2024|5end_hypothetical_protein_1978804..1979034_POSITIVE 851 440 391 54 5 pint:PI2022|5end_hypothetical_protein_1978631..1978861_POSITIVE 851 440 391 181 132 pint:PI0991|5end_conserved_hypothetical_protein_915309..915539_POSITIVE 844 478 431 49 2 pint:PI0866|5end_hypothetical_protein_803776..804006_POSITIVE 837 470 421 65 16 pint:PI0568|5end_hypothetical_protein_512950..513180_POSITIVE 835 440 391 201 152 pint:PI0827|5end_hypothetical_protein_763991..764221_POSITIVE 832 440 391 201 152 pint:PI0575|5end_hypothetical_protein_519561..519791_POSITIVE 805 470 421 192 144 pint:PI0211|5end_hypothetical_protein_204067..204297_POSITIVE 797 440 391 146 97 pint:PI1804|5end_hypothetical_protein_1738109..1738339_POSITIVE 780 470 421 211 162 pint:PI1437|5end_hypothetical_protein_1356088..1356318_POSITIVE 780 470 421 84 35 pint:PI1436|5end_hypothetical_protein_1355961..1356191_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 935 450 401 146 97 pint:PI0815|3end_hypothetical_protein_754677..754827_POSITIVE 915 450 401 146 97 pint:PI0081|3end_hypothetical_protein_80700..80850_POSITIVE 907 440 391 148 99 pint:PI1797|3end_hypothetical_protein_1731559..1731709_POSITIVE 907 440 391 148 99 pint:PI0885|3end_hypothetical_protein_817563..817713_POSITIVE 907 440 391 148 99 pint:PI0866|3end_hypothetical_protein_803993..804143_POSITIVE 907 440 391 148 99 pint:PI0820|3end_hypothetical_protein_759980..760130_POSITIVE 907 440 391 87 38 pint:PI0819|3end_hypothetical_protein_759919..760069_POSITIVE 907 440 391 136 87 pint:PI0095|3end_hypothetical_protein_91850..92000_POSITIVE 907 440 391 148 99 pint:PI0089|3end_hypothetical_protein_88355..88505_POSITIVE 888 440 391 148 99 pint:PI0118|3end_hypothetical_protein_111640..111790_POSITIVE 883 460 411 151 102 pint:PI0637|3end_hypothetical_protein_582397..582547_POSITIVE 851 440 391 136 87 pint:PI0568|3end_hypothetical_protein_513131..513281_POSITIVE 851 440 391 60 11 pint:PI0567|3end_hypothetical_protein_513055..513205_POSITIVE 847 440 391 148 99 pint:PI1041|3end_hypothetical_protein_960675..960825_POSITIVE 831 440 391 148 99 pint:PI1005|3end_hypothetical_protein_926481..926631_POSITIVE 805 450 401 146 97 pint:PI1155|3end_hypothetical_protein_1080352..1080502_POSITIVE 803 450 401 146 97 pint:PI0638|3end_hypothetical_protein_582402..582552_POSITIVE 764 450 401 146 97 pint:PI1252|3end_hypothetical_protein_1175440..1175590_POSITIVE 723 486 442 64 20 pint:PI1520|3end_hypothetical_protein_1441370..1441520_POSITIVE 716 480 431 149 100 pint:PI1521|3end_hypothetical_protein_1441461..1441611_POSITIVE