Origin IGS: taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 attcttttctttttaatttgttattcttttgttttctgatgcaaaggtaggcaatatctacttaccctccaatcggctttgtctatacggatataggttttatcaataatggcatctaactgtcagataaatagctgtttatgaatggaaaagaaaagaacaaatgatgatttttattttgaaatactgaaaagctgttgcacaaagagcgtggttaagttggggtactatatagaatatgtaggaataacttgttttatggtcgaaaagaagagaataactctgtaaatatttttcgcaggtgtaactgttgtgtaacttgctatgcttcaatgtattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcattttttaagagaattatctttacaaaacgaatggtattttttagtatttgccttgagtaagaaaaagaaaaccaactcgcccgataactatcgactaatcataagttggacataaaaaaatccccacaaacagcgattgtttgtggggatttgtatgctttctgaaacctta Mask Tandem Repeat Region ================================================ taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Find is-nt database================================================ Query_seq: PI1503:PI1504|PI1503:PI1504:30S ribosomal protein S15:non-specific DNA-binding protein:->->:1423841..1424457 617 taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI1503:PI1504|PI1503:PI1504:30S ribosomal protein S15:non-specific DNA-binding protein:->->:1423841..1424457 617 taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI1503:PI1504|PI1503:PI1504:30S ribosomal protein S15:non-specific DNA-binding protein:->->:1423841..1424457 617 taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Predict ORF larger than 30AA ================================================ Protein_Len: 30 Strand: + Start: 179 End: 268 .................................................................................................................................................................................. M R F D I A K A A V L R C K T Y A F T V Q N S R F W N A K Q ............................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 32 Strand: + Start: 292 End: 387 ................................................................................................................................................................................................................................................................................................... M A S Y T T V T P A K N I Y R V I L F F S T I K Q V I P T Y S I ...................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 126 End: 476 ............................................................................................................................. M L K N T I R F V K I I L L K N D N C V L T L R K R L F C V A K P T L L P C K T A A F G T Q N N R F C N T L K H S K L H ............................................................................................................................................. Protein_Len: 47 Strand: - Start: 333 End: 473 ............................................................................................................................................................................................................................................................................................................................................ L T I R K K E V M F C T I G V Y E I Y Y G L K V V S K T C C S K L I E F Y F D D N T R K K E M ................................................................................................................................................ Protein_Len: 52 Strand: - Start: 226 End: 381 ................................................................................................................................................................................................................................. A K V T C F L R K Q F A F C Y T K Y Y M S A Y C T V C C N C R R F I N V S N N E E K R G Y F L N N R C M ............................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 116 End: 310 ................................................................................................................... F F V M R K T F I I R K F F S L Q T K V N R F R S N Q T A F G V S K G H L V A A K P V C F L L N Q L V N F C L L N C L M ................................................................................................................................................................................................................................................................................................................... Protein_Len: 53 Strand: - Start: 61 End: 219 ............................................................ T W S I I L R Y N D P S N T K K K K S L A F V L F Y W E N Q L S L E R L F H Y S R K S M A F A A T K R Q M .............................................................................................................................................................................................................................................................................................................................................................................................................. taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 84 Start: 126 End: 155 .............................................................................................................................CTTTACAAAACGAATGGTATTTTTTAGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 100 HP_score: -16.9 Tail_Score: -4.19123 Start: 24 End: 52 Full_Region: ttggacataaaaaaa tccccacaaacag cga ttgtttgtgggga tttgtatgctttctg .......................tccccacaaacagcgattgtttgtgggga..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -17.0 Tail_Score: -4.07568 Start: 200 End: 250 Full_Region: TTTGACATTGCGAAA GCGGCTGTTTTGCGTTGCAAAACC TAC GCTTTTACCGTGCAAAACAGCCGC TTTTGGAACGCAAAA .......................................................................................................................................................................................................GCGGCTGTTTTGCGTTGCAAAACCTACGCTTTTACCGTGCAAAACAGCCGC............................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -14.8 Tail_Score: -3.59262 Start: 200 End: 250 Full_Region: ttttgcgttccaaaa gcggctgttttgcacggtaaaagc gta ggttttgcaacgcaaaacagccgc tttcgcaatgtcaaa .......................................................................................................................................................................................................gcggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgc............................................................................................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: PI1503:PI1504|PI1503:PI1504:30S ribosomal protein S15:non-specific DNA-binding protein:->->:1423841..1424457 617 taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Intra-Species Hit: Count: 58 Min: 1 Max: 617 Len: 617 Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 0.0 bit: 1181.0 Len: 617 Query Start:1 Query End:617 Subject Strand: POSITIVE Subject Start: 1 Subject End: 617 taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggannnnnnnatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat taaggtttcagaaagcatacaaatccccacaaacaatcgctgtttgtggggatttttttatgtccaacttatgattagtcgatagttatcgggcgagttggttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttcgaccataaaacaagttattcctacatattctatatagtaccccaacttaaccacgctctttgtgcaacagcttttcagtatttcaaaataaaaatcatcatttgttcttttcttttccattcataaacagctatttatctgacagttagatgccattattgataaaacctatatccgtatagacaaagccgattggagggtaagtagatattgcctacctttgcatcagaaaacaaaagaataacaaattaaaaagaaaagaat Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 1.0E-68 bit: 262.0 Len: 140 Query Start:142 Query End:281 Subject Strand: POSITIVE Subject Start: 162 Subject End: 301 .............................................................................................................................................ttcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ .............................................................................................................................................ttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 5.0E-65 bit: 250.0 Len: 134 Query Start:147 Query End:280 Subject Strand: NEGATIVE Subject Start: 251 Subject End: 384 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................tttgtaaagataattctcttaaaaagtgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccacttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 3.0E-63 bit: 244.0 Len: 207 Query Start:147 Query End:353 Subject Strand: POSITIVE Subject Start: 480 Subject End: 686 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttacagagttattctcttcttttc........................................................................................................................................................................................................................................................................ ..................................................................................................................................................tttgtaaagataattctgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccatgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgatacataataagttatataacagttatacttgcgaaaaatatttacatatttattatcttcttttc........................................................................................................................................................................................................................................................................ Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 1.0E-56 bit: 222.0 Len: 144 Query Start:145 Query End:288 Subject Strand: NEGATIVE Subject Start: 85 Subject End: 228 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattga......................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaagataattctgttaaaaactgataactgcgctttggcattgcgaaagcggctcttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgcaatgcattga......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 4.0E-56 bit: 220.0 Len: 139 Query Start:145 Query End:283 Subject Strand: NEGATIVE Subject Start: 91 Subject End: 229 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatac.............................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................gttttgtaaagataattctgttaaaaactgataactgcgttttgacattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgcaatac.............................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 4.0E-56 bit: 220.0 Len: 139 Query Start:145 Query End:283 Subject Strand: POSITIVE Subject Start: 49 Subject End: 187 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatac.............................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................gttttgtaaagataattccgttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatac.............................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386 HSP 1 e-value: 2.0E-55 bit: 218.0 Len: 138 Query Start:147 Query End:284 Subject Strand: POSITIVE Subject Start: 215 Subject End: 352 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaataca............................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................tttgtaaagattattctcttaaaaagtgataactgcgttttgacgatgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaataca............................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 7.0E-55 bit: 216.0 Len: 189 Query Start:146 Query End:334 Subject Strand: NEGATIVE Subject Start: 247 Subject End: 435 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttaca........................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttgacgttgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaacacgttgatgcacagttagttacataatagatactcgtgtgaaaaatatttaca........................................................................................................................................................................................................................................................................................... Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 1.0E-53 bit: 212.0 Len: 143 Query Start:146 Query End:288 Subject Strand: NEGATIVE Subject Start: 83 Subject End: 225 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattga......................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttgacgttgcgaaagcggctcttttacgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgtaatacgttga......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 1.0E-53 bit: 212.0 Len: 135 Query Start:146 Query End:280 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 282 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgtaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 4.0E-53 bit: 210.0 Len: 134 Query Start:147 Query End:280 Subject Strand: POSITIVE Subject Start: 149 Subject End: 282 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................tttgtaaagataattccgttaaaaagtgataaccgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 4.0E-53 bit: 210.0 Len: 134 Query Start:148 Query End:281 Subject Strand: POSITIVE Subject Start: 170 Subject End: 303 ...................................................................................................................................................ttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ ...................................................................................................................................................ttgtaaagataattccgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcattgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 7.0E-52 bit: 206.0 Len: 136 Query Start:146 Query End:281 Subject Strand: POSITIVE Subject Start: 111 Subject End: 246 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 1.0E-50 bit: 202.0 Len: 130 Query Start:147 Query End:276 Subject Strand: POSITIVE Subject Start: 200 Subject End: 329 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................tttgtaaagataattccgttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgtttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 1.0E-50 bit: 202.0 Len: 142 Query Start:147 Query End:288 Subject Strand: POSITIVE Subject Start: 60 Subject End: 201 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattga......................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................tttgtaaagataattctgttaaaaagtgacaactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttagaatgcaaaacaataggttttgtaacacattga......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 6.0E-49 bit: 196.0 Len: 135 Query Start:147 Query End:281 Subject Strand: NEGATIVE Subject Start: 382 Subject End: 516 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ ..................................................................................................................................................tttgtaaagataattctgatgaaaaatgataatttcgatttggcattgcgaaagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 133 Query Start:145 Query End:277 Subject Strand: POSITIVE Subject Start: 113 Subject End: 245 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaagattattctgttaaaaagcgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttagcgtgcaaaacagccgcttttggaatgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 2.0E-46 bit: 188.0 Len: 135 Query Start:147 Query End:281 Subject Strand: POSITIVE Subject Start: 310 Subject End: 444 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ ..................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 2.0E-46 bit: 188.0 Len: 135 Query Start:146 Query End:280 Subject Strand: POSITIVE Subject Start: 185 Subject End: 319 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgctttggcgttgcgaaagcggctcttttgtgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcgaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 2.0E-45 bit: 184.0 Len: 137 Query Start:145 Query End:281 Subject Strand: POSITIVE Subject Start: 112 Subject End: 248 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................gttttgtaaagataatttctttgaaaaatggtaatttcgatttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409 HSP 1 e-value: 2.0E-43 bit: 178.0 Len: 185 Query Start:150 Query End:334 Subject Strand: POSITIVE Subject Start: 105 Subject End: 289 .....................................................................................................................................................gtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattga-agcatagcaagttacacaacagttacacctgcgaaaaatatttaca........................................................................................................................................................................................................................................................................................... .....................................................................................................................................................gtaaagatattttccttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaatgcgttgataaca-agtaagttacacaatagttatgcctgtgaaaaatatttaca........................................................................................................................................................................................................................................................................................... Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 6.0E-43 bit: 176.0 Len: 189 Query Start:146 Query End:334 Subject Strand: POSITIVE Subject Start: 141 Subject End: 329 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttaca........................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttataatgccttaaaagtgagatagttacacaacggtaacacttgtgaaaaatatttaca........................................................................................................................................................................................................................................................................................... Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 2.0E-42 bit: 174.0 Len: 144 Query Start:145 Query End:288 Subject Strand: NEGATIVE Subject Start: 99 Subject End: 242 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattga......................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaaaataattccgttaaaaagcgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataacacattga......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 1.0E-40 bit: 168.0 Len: 189 Query Start:146 Query End:334 Subject Strand: POSITIVE Subject Start: 91 Subject End: 279 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttaca........................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataatttctttaaaaagtaataatttcgatttgacattgcgaaaacggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggagtgcaaaacaataggttttgcaatacgttgaaatatagcgagttagacaacaactatgcttgtgaaaaatatttaca........................................................................................................................................................................................................................................................................................... Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 136 Query Start:145 Query End:280 Subject Strand: NEGATIVE Subject Start: 407 Subject End: 542 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................gttttgtaaagataattacattgaaaattgataatttcgttttgacgttgcgaaagcggctgttttgcgaggtaaaacctacgcttttgccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1408_PI1409|glucose-1-phosphate thymidylyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1329822,1330988]|1167 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 136 Query Start:146 Query End:281 Subject Strand: NEGATIVE Subject Start: 692 Subject End: 827 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................ttttgtaaaaataattctgttaaaaagtgataactgtactttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatacaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 132 Query Start:146 Query End:277 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 218 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagattatttctttagaaaatggtaatttcgatttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 4.0E-38 bit: 161.0 Len: 137 Query Start:145 Query End:281 Subject Strand: POSITIVE Subject Start: 200 Subject End: 335 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................gttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctg-tttgcgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1577_PI1578|conserved hypothetical protein:rod shape-determining protein|POSITIVE:POSITIVE|[1503940,1504327]|388 HSP 1 e-value: 1.0E-37 bit: 159.0 Len: 104 Query Start:185 Query End:288 Subject Strand: POSITIVE Subject Start: 108 Subject End: 211 ........................................................................................................................................................................................tttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattga......................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................tttgacgttgcgaaagcggctcttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataacacattga......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 2.0E-36 bit: 155.0 Len: 142 Query Start:146 Query End:287 Subject Strand: POSITIVE Subject Start: 155 Subject End: 296 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattg.......................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataattcgttaagaaaacgataatttcgatttgacgttgcgaaagctgctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataatgcattg.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1271_PI1272|transcriptional regulator, AraC/XylS family:possible transcriptional regulator|POSITIVE:POSITIVE|[1191345,1191841]|497 HSP 1 e-value: 2.0E-36 bit: 155.0 Len: 138 Query Start:147 Query End:284 Subject Strand: POSITIVE Subject Start: 257 Subject End: 394 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaataca............................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................tttgtaaatataattccgttaaaaagtgataactgcgctttaacgttgcgaaagcggttcttttgcgatgcaaaacctacgcttttaccgtacaaaacagccgcttttggaacgcaaaagcgtaggttttgcaataca............................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 3.0E-35 bit: 151.0 Len: 136 Query Start:145 Query End:280 Subject Strand: NEGATIVE Subject Start: 37 Subject End: 172 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................gttttgtaaagataattctgatgaaaaacaataatttcgttttgacgttgcgaaagcggctcttttacaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 3.0E-35 bit: 151.0 Len: 132 Query Start:145 Query End:276 Subject Strand: POSITIVE Subject Start: 214 Subject End: 345 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaagataatttcgctgaaaaacgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 2.0E-33 bit: 145.0 Len: 137 Query Start:145 Query End:281 Subject Strand: POSITIVE Subject Start: 9 Subject End: 145 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................gttttgtaaagataattccgaagaaaaatgataatttcgatttgacgttgcgaaagtggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI2056_PI2057|conserved hypothetical protein:conserved hypothetical protein; possible metal-dependent membrane protease|POSITIVE:POSITIVE|[2014489,2015078]|590 HSP 1 e-value: 8.0E-30 bit: 133.0 Len: 139 Query Start:146 Query End:284 Subject Strand: POSITIVE Subject Start: 341 Subject End: 479 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaataca............................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................ttttgtaaagataattcgttaagaaaacaataatttcgatttgacgttgcgaaagcggctcttttgtaatgcaaaacttacgcttttaccatgcaaaacagccgcttttggaatgcgaaacaataggttttgtaataca............................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 8.0E-30 bit: 133.0 Len: 143 Query Start:146 Query End:288 Subject Strand: POSITIVE Subject Start: 191 Subject End: 333 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattga......................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataatttcgttaaaaagtgataactgcactttgacgttgcgaaagcggctgttttacgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttaggacgcaaaacaatagattttgtaatgcattga......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 3.0E-29 bit: 131.0 Len: 186 Query Start:149 Query End:334 Subject Strand: POSITIVE Subject Start: 190 Subject End: 375 ....................................................................................................................................................tgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttaca........................................................................................................................................................................................................................................................................................... ....................................................................................................................................................tgtaaaaataattccgttaaaaagtaataactgcgctttgacattgcgaaagtggctgttttgcaacgcaaaacagccgcttttatcgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatacattgatgtatagatagttatgcaatagtttcccttgtgaaaaatatttaca........................................................................................................................................................................................................................................................................................... Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 1.0E-28 bit: 129.0 Len: 133 Query Start:145 Query End:277 Subject Strand: POSITIVE Subject Start: 143 Subject End: 275 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaagataattcgttgaaaaaatgataatttcgatttgacattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 5.0E-28 bit: 127.0 Len: 136 Query Start:145 Query End:280 Subject Strand: NEGATIVE Subject Start: 328 Subject End: 463 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................gttttgtaaagataattcgttaagaaaacgataatttcgatttgacgttgcgaaagcagctcttttgcaacgcaaaacctatgcttttaccgtgcaaaacagccgcttttaggatgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406 HSP 1 e-value: 8.0E-27 bit: 123.0 Len: 190 Query Start:145 Query End:334 Subject Strand: NEGATIVE Subject Start: 133 Subject End: 322 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattgaagcatagcaagttacacaacagttacacctgcgaaaaatatttaca........................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaagataattcccttaaaaaaggataactgcgctttggcattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaacacgttttataacacgctgatgtatagatagttaccgaacagttatgcttgtgaaaaatatttaca........................................................................................................................................................................................................................................................................................... Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 8.0E-27 bit: 123.0 Len: 130 Query Start:147 Query End:276 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 308 ..................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................tttgtaaagataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 35 Query Start:197 Query End:231 Subject Strand: POSITIVE Subject Start: 224 Subject End: 258 ....................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt.................................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt.................................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479 HSP 1 e-value: 3.0E-26 bit: 121.0 Len: 129 Query Start:148 Query End:276 Subject Strand: POSITIVE Subject Start: 113 Subject End: 241 ...................................................................................................................................................ttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................ttgtaaaaataattccgttaaaaagtgataactgccttttgacattgcaaaagcagctgttttacgatgcaaaacaaccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1909_PI1910|DNA gyrase, B subunit:hypothetical protein|POSITIVE:POSITIVE|[1855331,1855917]|587 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 132 Query Start:146 Query End:277 Subject Strand: NEGATIVE Subject Start: 346 Subject End: 477 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataacattgttaaaaagtgataactgcgctttgacattgcgaaagcgtaggttttgcgatgcaaaagcgccacttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 136 Query Start:146 Query End:281 Subject Strand: POSITIVE Subject Start: 79 Subject End: 214 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1981_PI1982|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1938199,1938578]|380 HSP 1 e-value: 5.0E-25 bit: 117.0 Len: 143 Query Start:145 Query End:287 Subject Strand: POSITIVE Subject Start: 143 Subject End: 285 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattg.......................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaagataattctgataaaaaacagcaatttcggtttgacattgcgaaagcggctgttttgcatttcaaaacagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttataatatattg.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1958_PI1959|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1917430,1917847]|418 HSP 1 e-value: 2.0E-24 bit: 115.0 Len: 142 Query Start:146 Query End:287 Subject Strand: POSITIVE Subject Start: 182 Subject End: 323 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacattg.......................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................ttttgtaaagataattctgataaaaaacagcaatttcggtttgacattgcaaaagcggctgttttgcattgcaaaacagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttataatatattg.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 2.0E-24 bit: 115.0 Len: 162 Query Start:119 Query End:280 Subject Strand: NEGATIVE Subject Start: 53 Subject End: 214 ......................................................................................................................aaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................aaggcaaatactgaaaaatctctttcgttttgtaaagataattccgacgaaaaacggtaatttcgatttggcgttgcgaaagcggctgttttgcagcgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 1.0E-22 bit: 109.0 Len: 183 Query Start:102 Query End:284 Subject Strand: NEGATIVE Subject Start: 225 Subject End: 406 .....................................................................................................ttttctttttcttactcaaggcaaatactaaaaaataccattcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaataca............................................................................................................................................................................................................................................................................................................................................. .....................................................................................................ttttctttttcttgctcaaggtaaataccccaaaattactttggttttgtaaagataattca-ttgaaaaacgataatttcgatttggcattgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacacttttggaatgcaaaacaataggttttataataca............................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 35 Query Start:197 Query End:231 Subject Strand: POSITIVE Subject Start: 278 Subject End: 312 ....................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt.................................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt.................................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415 HSP 1 e-value: 7.0E-21 bit: 103.0 Len: 132 Query Start:145 Query End:276 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 310 ................................................................................................................................................gttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................gttttgtaaagataattttattaaaaagtggcaattgcgttttgacattgcaaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcgaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 36 Query Start:197 Query End:232 Subject Strand: POSITIVE Subject Start: 224 Subject End: 259 ....................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgctttt................................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt................................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1588_PI1589|DNA polymerase III, epsilon chain:conserved hypothetical protein|POSITIVE:POSITIVE|[1516991,1517497]|507 HSP 1 e-value: 7.0E-18 bit: 93.7 Len: 123 Query Start:146 Query End:268 Subject Strand: POSITIVE Subject Start: 226 Subject End: 348 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaa............................................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................ttttgtaaaaataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcacgccaaaagcggctcttttaccttgcaaaacagccgcttttggaacgcaaaacaa............................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 3.0E-17 bit: 91.7 Len: 110 Query Start:168 Query End:277 Subject Strand: NEGATIVE Subject Start: 106 Subject End: 215 .......................................................................................................................................................................aaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................aaaaatgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacagccgcttttgccgtgtaaaacctacgcttttggaatgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1324_PI1325|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1243086,1243554]|469 HSP 1 e-value: 7.0E-15 bit: 83.8 Len: 134 Query Start:148 Query End:281 Subject Strand: NEGATIVE Subject Start: 257 Subject End: 390 ...................................................................................................................................................ttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ ...................................................................................................................................................ttgtaaaaataattctgttaaaaagtgataactgcactttggcattgtaaaagcggctgttttgcatcgcaaaacagccgcttttggctggtaaaagagccgcttttacaatgtaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1915_PI1916|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1859967,1860350]|384 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 136 Query Start:146 Query End:281 Subject Strand: POSITIVE Subject Start: 114 Subject End: 249 .................................................................................................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacc-tacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................ttttgtaaaaataattctgacgaaaaacgataatttcgatttggcattgcgaaagcggctgttttgcacggtaaaagcgtatg-ttttacgttgcaaaacagccgcttttggaatgcaaaacaataggttttataat................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 6.0E-12 bit: 73.8 Len: 57 Query Start:197 Query End:253 Subject Strand: NEGATIVE Subject Start: 165 Subject End: 221 ....................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttt............................................................................................................................................................................................................................................................................................................................................................................ ....................................................................................................................................................................................................aaagcggctgttttgcaacgtaaaacatacgcttttaccgtgcaaaacagccgcttt............................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 109 Query Start:169 Query End:277 Subject Strand: POSITIVE Subject Start: 164 Subject End: 272 ........................................................................................................................................................................aaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................aaaatgataatttcgatttggcattgcgaaagcggctgttttgcatcgcaaaacagccgctttgaccgtgtaaaacctacgcttttacaatgcaaaacaataggttttg.................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1688_PI1689|possible GTPase:conserved hypothetical protein|POSITIVE:POSITIVE|[1603964,1604449]|486 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 108 Query Start:169 Query End:276 Subject Strand: NEGATIVE Subject Start: 174 Subject End: 281 ........................................................................................................................................................................aaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................aaaatgataatttcgatttgacgttgcgaaagcgtatgttttgcgatgcaaaagagccgcttttaccgtgcaaaacctacgcttttacaatgcaaaacaataggtttt..................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 4.0E-13 bit: 77.8 Len: 115 Query Start:168 Query End:282 Subject Strand: POSITIVE Subject Start: 763 Subject End: 877 .......................................................................................................................................................................aaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaata............................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................aaaaatgataatttcgatttggcgttgcgaaagcgtaggttttgcaacgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttataata............................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-10 bit: 69.9 Len: 35 Query Start:197 Query End:231 Subject Strand: NEGATIVE Subject Start: 792 Subject End: 826 ....................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt.................................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt.................................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1937_PI1938|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1891147,1891993]|847 HSP 1 e-value: 1.0E-7 bit: 60.0 Len: 130 Query Start:151 Query End:280 Subject Strand: POSITIVE Subject Start: 507 Subject End: 636 ......................................................................................................................................................taaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa................................................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................taaagataattctgttaaaaagcgataactgcgctttggcgttgcgaaagcgtaacttttgcacgccaaaagagccgcttttaccttgcaaaacctacgcttttagaacgtaaaacaataggctttgtaa................................................................................................................................................................................................................................................................................................................................................. Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGGUUUCAGAAAGCAUACAAAUCCCCACAAACAAUCGCUGUUUGUGGGGAUUUUUUUAUGUCCAACUUAUGAUUAGUCGAUAGUUAUCGGGCGAGUUGGUUUUCUUUUUCUUACUCAAGGCAAAUACUAAAAAAUACCAUUCGUUUUGUAAAGAUAAUUCUCUUAAAAAAUGAUAACUGCGUUUUGACAUUGCGAAAGCGGCUGUUUUGCGUUGCAAAACCUACGCUUUUACCGUGCAAAACAGCCGCUUUUGGAACGCAAAACAAUAGGUUUUGUAAUACAUUGAAGCAUAGCAAGUUACACAACAGUUACACCUGCGAAAAAUAUUUACAGAGUUAUUCUCUUCUUUUCGACCAUAAAACAAGUUAUUCCUACAUAUUCUAUAUAGUACCCCAACUUAACCACGCUCUUUGUGCAACAGCUUUUCAGUAUUUCAAAAUAAAAAUCAUCAUUUGUUCUUUUCUUUUCCAUUCAUAAACAGCUAUUUAUCUGACAGUUAGAUGCCAUUAUUGAUAAAACCUAUAUCCGUAUAGACAAAGCCGAUUGGAGGGUAAGUAGAUAUUGCCUACCUUUGCAUCAGAAAACAAAAGAAUAACAAAUUAAAAAGAAAAGAAU ..............(((((.(((((((((((((((.....)))))))))))))))...)))))((((((((((((((.....))))))).....)))))))((((((((((..((((.(((((...(((((...........(((((((...((((......))))..)))))))(((((..((((((.(.((.(((((((((((((((((((..(.((((.......)))).)..))))))))))))))))))).)).))))))).....(((((((........((((.(((((..((.((......)).))..(((..((.....))..))).)))))...)))).........))))))).))))).................)))))...............((.......))....)))))..)))).....................((((((((((.(((((.............((((((((((..((((..(.((.(..(((.((((.......)))).)))..).))...)..))))..))))))))))....(((........)))...))))).))))))))))......)))))))))).... (-142.63) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUUCUUUUCUUUUUAAUUUGUUAUUCUUUUGUUUUCUGAUGCAAAGGUAGGCAAUAUCUACUUACCCUCCAAUCGGCUUUGUCUAUACGGAUAUAGGUUUUAUCAAUAAUGGCAUCUAACUGUCAGAUAAAUAGCUGUUUAUGAAUGGAAAAGAAAAGAACAAAUGAUGAUUUUUAUUUUGAAAUACUGAAAAGCUGUUGCACAAAGAGCGUGGUUAAGUUGGGGUACUAUAUAGAAUAUGUAGGAAUAACUUGUUUUAUGGUCGAAAAGAAGAGAAUAACUCUGUAAAUAUUUUUCGCAGGUGUAACUGUUGUGUAACUUGCUAUGCUUCAAUGUAUUACAAAACCUAUUGUUUUGCGUUCCAAAAGCGGCUGUUUUGCACGGUAAAAGCGUAGGUUUUGCAACGCAAAACAGCCGCUUUCGCAAUGUCAAAACGCAGUUAUCAUUUUUUAAGAGAAUUAUCUUUACAAAACGAAUGGUAUUUUUUAGUAUUUGCCUUGAGUAAGAAAAAGAAAACCAACUCGCCCGAUAACUAUCGACUAAUCAUAAGUUGGACAUAAAAAAAUCCCCACAAACAGCGAUUGUUUGUGGGGAUUUGUAUGCUUUCUGAAACCUUA .(((((((((((((.((((((((((..((((......(((((...((((((.........))))))........((((((((((....))))).)))))............))))).......))))..)))))).......)))).))))))))))))).(((((((((((....(((((.(((((((((.(((.((((((((..((.(((((.(((((((.....(((((((...)))))))...)))))))..))))).)).......((((.....)))).............((((......))))))))))))..)))....))))..))))).)))))......((((((((((.(.((((((((((((((((...((((((.(...).))))))...)))))))))))))))).).)))).))))))..)))))))))))..((((.......((((..(((..((((((.((.....)).))))))..)))...))))...(((((.((((((....((((....))))..........)))))).((((...((((((((((((((((...)))))))))))))))).)))).))))).....)))) (-168.47) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 991 250 201 122 73 pint:PI0055|5end_hypothetical_protein_54815..55045_POSITIVE 943 250 201 73 24 pint:PI1346|5end_hypothetical_protein_1260814..1261044_POSITIVE 922 250 201 56 7 pint:PI1528|5end_hypothetical_protein_1449685..1449915_POSITIVE 917 260 211 55 6 pint:PI0061|5end_hypothetical_protein_60500..60730_POSITIVE 917 260 211 55 6 pint:PI0004|5end_hypothetical_protein_6199..6429_POSITIVE 914 270 221 93 44 pint:PI2153|5end_hypothetical_protein_2099392..2099622_POSITIVE 914 270 221 50 1 pint:PI1905|5end_hypothetical_protein_1847628..1847858_POSITIVE 914 250 201 81 32 pint:PI1168|5end_hypothetical_protein_1089696..1089926_POSITIVE 914 250 201 73 24 pint:PI1167|5end_hypothetical_protein_1089688..1089918_POSITIVE 913 240 191 63 14 pint:PI1934|5end_hypothetical_protein_1882363..1882593_POSITIVE 888 250 202 100 52 pint:PI1604|5end_hypothetical_protein_1534017..1534247_POSITIVE 885 250 201 199 150 pint:PI0788|5end_3-methyladenine_DNA_glycosylase_(DNA-3-methyladenine_glycosylase_I)_726152..726382_POSITIVE 871 250 201 73 24 pint:PI2002|5end_hypothetical_protein_1960662..1960892_POSITIVE 871 250 201 61 12 pint:PI1129|5end_hypothetical_protein_1055377..1055607_POSITIVE 862 270 221 54 5 pint:PI0099|5end_hypothetical_protein_95530..95760_POSITIVE 856 250 201 73 24 pint:PI1567|5end_hypothetical_protein_1489229..1489459_POSITIVE 855 240 191 205 156 pint:PI1486|5end_alginate_O-acetylation_protein_1405507..1405737_POSITIVE 852 240 191 200 151 pint:PI0159|5end_hypothetical_protein_151273..151503_POSITIVE 852 240 191 112 63 pint:PI0157|5end_hypothetical_protein_151185..151415_POSITIVE 842 250 201 73 24 pint:PI1694|5end_hypothetical_protein_1609717..1609947_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 991 250 201 56 7 pint:PI0054|3end_hypothetical_protein_54829..54979_POSITIVE 965 260 211 125 76 pint:PI1141|3end_hypothetical_protein_1069713..1069863_POSITIVE 913 240 191 145 96 pint:PI1340|3end_hypothetical_protein_1256872..1257022_POSITIVE 900 240 192 149 101 pint:PI1922|3end_hypothetical_protein_1865454..1865604_POSITIVE 888 260 211 125 76 pint:PI0759|3end_hypothetical_protein_693998..694148_POSITIVE 871 250 201 56 7 pint:PI0996|3end_hypothetical_protein_920660..920810_POSITIVE 865 270 223 48 1 pint:PI0688|3end_hypothetical_protein_625750..625900_POSITIVE 858 280 231 52 3 pint:PI0669|3end_hypothetical_protein_611147..611297_POSITIVE 852 240 191 145 96 pint:PI0158|3end_hypothetical_protein_151298..151448_POSITIVE 841 240 191 145 96 pint:PI0061|3end_hypothetical_protein_60690..60840_POSITIVE 832 230 183 149 102 pint:PI1528|3end_hypothetical_protein_1449878..1450028_POSITIVE 832 240 191 145 96 pint:PI0004|3end_hypothetical_protein_6389..6539_POSITIVE 789 240 192 145 97 pint:PI0689|3end_hypothetical_protein_625877..626027_POSITIVE 789 270 223 48 1 pint:PI0186|3end_hypothetical_protein_178003..178153_POSITIVE 783 240 191 145 96 pint:PI1814|3end_hypothetical_protein_1753233..1753383_POSITIVE 767 240 191 139 90 pint:PI0182|3end_hypothetical_protein_174277..174427_POSITIVE 761 240 191 145 96 pint:PI0670|3end_hypothetical_protein_611280..611430_POSITIVE 742 240 192 119 71 pint:PI1356|3end_hypothetical_protein_1273340..1273490_POSITIVE 720 230 181 145 96 pint:PI1601|3end_hypothetical_protein_1530454..1530604_POSITIVE 714 280 231 54 5 pint:PI1051|3end_hypothetical_protein_970228..970378_POSITIVE