Origin IGS: gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taagtaaaacatattcttttaaaagtccctaagtttatttcgagaaacttaggggctttcttcaatatgatgtcatcaaataacatatcatttcttcttctgatttacaaggtatttgttagagaaaagattgtgcttttattgctgaaaacatctctcaaaatatctttggttttgtaaagataattctgatgaaaaacaataatttcgttttgacgttgcgaaagcggctcttttacaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgtaaagcattgataaagagtaagttaaatgatagatattc Mask Tandem Repeat Region ================================================ gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Find is-nt database================================================ Query_seq: PI1051:PI1052|PI1051:PI1052:hypothetical protein:fructose-1,6-bisphosphatase:->->:970289..970631 343 gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI1051:PI1052|PI1051:PI1052:hypothetical protein:fructose-1,6-bisphosphatase:->->:970289..970631 343 gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI1051:PI1052|PI1051:PI1052:hypothetical protein:fructose-1,6-bisphosphatase:->->:970289..970631 343 gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Predict ORF larger than 30AA ================================================ Protein_Len: 35 Strand: + Start: 98 End: 202 ................................................................................................. M R C K R A A F A T S K R N Y C F S S E L S L Q N Q R Y F E R C F Q Q ............................................................................................................................................. Protein_Len: 33 Strand: + Start: 138 End: 236 ......................................................................................................................................... M I V F H Q N Y L Y K T K D I L R D V F S N K S T I F S L T N T L ........................................................................................................... Protein_Len: 34 Strand: + Start: 240 End: 341 ............................................................................................................................................................................................................................................... M R R R N D M L F D D I I L K K A P K F L E I N L G T F K R I C F T .. Protein_Len: 55 Strand: - Start: 167 End: 331 ...................................................................................................................................................................... L V L S I K L S T K L L L L V I K E R V F V K Y I L L L F S I N N S S M M N F F A G L N R S I F K P V K L L M ............ Protein_Len: 60 Strand: - Start: 3 End: 203 .. K I L A K C F R N N Q M G F A A R K C P L L T P K A N Y F L R K R L T L V F N N N K M L I I K V F G F I N Q S I N E A M ............................................................................................................................................ gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 100 HP_score: -15.6 Tail_Score: -3.54424 Start: 67 End: 117 Full_Region: TTTTGCATTCCAAAA GCGGCTCTTTTGCACGGTAAAAGC GTA GGTTTTGCGTTGTAAAAGAGCCGC TTTCGCAACGTCAAA ..................................................................GCGGCTCTTTTGCACGGTAAAAGCGTAGGTTTTGCGTTGTAAAAGAGCCGC.................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 93 HP_score: -11.2 Tail_Score: -4.13767 Start: 67 End: 117 Full_Region: tttgacgttgcgaaa gcggctcttttacaacgcaaaacc tac gcttttaccgtgcaaaagagccgc ttttggaatgcaaaa ..................................................................gcggctcttttacaacgcaaaacctacgcttttaccgtgcaaaagagccgc.................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 44 HP_score: -2.0 Tail_Score: -3.18772 Start: 92 End: 137 Full_Region: TGCACGGTAAAAGCG TAGGTTTTGCGTTGTAAAAG AGCCG CTTTCGCAACGTCAAAACGAA ATTATTGTTTTTCAT ...........................................................................................TAGGTTTTGCGTTGTAAAAGAGCCGCTTTCGCAACGTCAAAACGAA.............................................................................................................................................................................................................. TransTerm Strand: - Conf: 81 HP_score: -10.2 Tail_Score: -3.1544 Start: 284 End: 323 Full_Region: aaaacatattctttt aaaagtccctaagtttat ttcg agaaacttaggggctttc ttcaatatgatgtca ...........................................................................................................................................................................................................................................................................................aaaagtccctaagtttatttcgagaaacttaggggctttc.................... TransTerm Strand: + Conf: 82 HP_score: -8.8 Tail_Score: -4.09243 Start: 288 End: 319 Full_Region: ATCATATTGAAGAAA GCCCCTAAGTTTCT CGAA ATAAACTTAGGGAC TTTTAAAAGAATATG ...............................................................................................................................................................................................................................................................................................GCCCCTAAGTTTCTCGAAATAAACTTAGGGAC........................ Find igs database================================================ Query_seq: PI1051:PI1052|PI1051:PI1052:hypothetical protein:fructose-1,6-bisphosphatase:->->:970289..970631 343 gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Intra-Species Hit: Count: 51 Min: 1 Max: 343 Len: 343 Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 0.0 bit: 680.0 Len: 343 Query Start:1 Query End:343 Subject Strand: POSITIVE Subject Start: 1 Subject End: 343 gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta gaatatctatcatttaacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatattttgagagatgttttcagcaataaaagcacaatcttttctctaacaaataccttgtaaatcagaagaagaaatgatatgttatttgatgacatcatattgaagaaagcccctaagtttctcgaaataaacttagggacttttaaaagaatatgttttactta Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 6.0E-51 bit: 202.0 Len: 146 Query Start:27 Query End:172 Subject Strand: NEGATIVE Subject Start: 9 Subject End: 154 ..........................tatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ..........................tatcaacgcattacaaaacctattgttttgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccactttcgcaacgtcaaatcgaaattatcatttttcttcggaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI0694_PI0695|Na+/dicarboxylate or sulfate symporter:xanthine/uracil permease family protein|POSITIVE:POSITIVE|[631238,631552]|315 HSP 1 e-value: 2.0E-50 bit: 200.0 Len: 141 Query Start:35 Query End:175 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 224 ..................................ctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaa........................................................................................................................................................................ ..................................ctttgcaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcagtgtcaaatcgaaattaccgttttccgtcggaattatctttacaaaaccaa........................................................................................................................................................................ Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 2.0E-47 bit: 190.0 Len: 144 Query Start:27 Query End:170 Subject Strand: POSITIVE Subject Start: 373 Subject End: 516 ..........................tatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaa............................................................................................................................................................................. ..........................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa............................................................................................................................................................................. Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 1.0E-45 bit: 184.0 Len: 133 Query Start:41 Query End:173 Subject Strand: NEGATIVE Subject Start: 213 Subject End: 345 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaacc.......................................................................................................................................................................... ........................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttcagcgaaattatctttacaaaacc.......................................................................................................................................................................... Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 5.0E-45 bit: 182.0 Len: 148 Query Start:26 Query End:173 Subject Strand: POSITIVE Subject Start: 96 Subject End: 243 .........................ttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaacc.......................................................................................................................................................................... .........................ttatcaatgtgttataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaacgtcaaagcgcagttatcgctttttaacggaattatttttacaaaacc.......................................................................................................................................................................... Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 2.0E-44 bit: 180.0 Len: 135 Query Start:37 Query End:171 Subject Strand: POSITIVE Subject Start: 91 Subject End: 225 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ ....................................ttacaaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcatcgtaaaagagccgctttcgcaacgtcaaagcgcagttatcagtttttaacagaattatctttacaaaa............................................................................................................................................................................ Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 2.0E-44 bit: 180.0 Len: 151 Query Start:22 Query End:172 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 262 .....................ctctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... .....................ctctttatcaacgcattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaatcgaaattaccatttttcaaagaaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409 HSP 1 e-value: 8.0E-44 bit: 178.0 Len: 118 Query Start:15 Query End:132 Subject Strand: NEGATIVE Subject Start: 140 Subject End: 257 ..............taacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaa................................................................................................................................................................................................................... ..............taacttacttgttatcaacgcattgcaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaacgtcaaa................................................................................................................................................................................................................... Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 3.0E-43 bit: 176.0 Len: 133 Query Start:40 Query End:172 Subject Strand: POSITIVE Subject Start: 97 Subject End: 229 .......................................caaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... .......................................caaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgtcaaaacgcagttatcagtttttaacagaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 5.0E-42 bit: 172.0 Len: 119 Query Start:30 Query End:148 Subject Strand: NEGATIVE Subject Start: 178 Subject End: 296 .............................caatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttt................................................................................................................................................................................................... .............................caatgcattataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagcagctttcgcaacgtcaaatcgaaattatcgtttt................................................................................................................................................................................................... Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 5.0E-42 bit: 172.0 Len: 150 Query Start:28 Query End:177 Subject Strand: POSITIVE Subject Start: 319 Subject End: 468 ...........................atcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatca-gaattatctttacaaaaccaaag...................................................................................................................................................................... ...........................atcagtgcgttacaaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgtttt-cttaacgaattatctttacaaaaccaaag...................................................................................................................................................................... Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 3.0E-40 bit: 167.0 Len: 132 Query Start:40 Query End:171 Subject Strand: POSITIVE Subject Start: 304 Subject End: 435 .......................................caaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ .......................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaacgtcaaagcgcagttatcactttttaagagaattatctttacaaaa............................................................................................................................................................................ Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 1.0E-39 bit: 165.0 Len: 139 Query Start:37 Query End:175 Subject Strand: POSITIVE Subject Start: 407 Subject End: 545 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaa........................................................................................................................................................................ ....................................ttacaaaacctattgttttgcattccaaaagcggctgttttgcacggcaaaagcgtaggttttacctcgcaaaacagccgctttcgcaacgtcaaaacgaaattatcaattttcaatgtaattatctttacaaaaccaa........................................................................................................................................................................ Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 5.0E-39 bit: 163.0 Len: 158 Query Start:15 Query End:172 Subject Strand: NEGATIVE Subject Start: 113 Subject End: 270 ..............taacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ..............taacttactcgctgtcaatgcgttgcaaaacctattgttttgcattccaaaagcggctgttttgcacgctaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcgctttttaacagaataatctttacaaaac........................................................................................................................................................................... Subject: pint_PI1577_PI1578|conserved hypothetical protein:rod shape-determining protein|POSITIVE:POSITIVE|[1503940,1504327]|388 HSP 1 e-value: 2.0E-38 bit: 161.0 Len: 121 Query Start:28 Query End:148 Subject Strand: NEGATIVE Subject Start: 92 Subject End: 212 ...........................atcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttt................................................................................................................................................................................................... ...........................atcaatgtgttataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaacgtcaaatcgaaattatagtttt................................................................................................................................................................................................... Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 2.0E-38 bit: 161.0 Len: 145 Query Start:26 Query End:170 Subject Strand: NEGATIVE Subject Start: 60 Subject End: 204 .........................ttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaa............................................................................................................................................................................. .........................ttatcaatgtgttacaaaacctattgttttgcattctaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttgtcactttttaacagaattatctttacaaa............................................................................................................................................................................. Subject: pint_PI2056_PI2057|conserved hypothetical protein:conserved hypothetical protein; possible metal-dependent membrane protease|POSITIVE:POSITIVE|[2014489,2015078]|590 HSP 1 e-value: 8.0E-38 bit: 159.0 Len: 112 Query Start:37 Query End:148 Subject Strand: NEGATIVE Subject Start: 364 Subject End: 475 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttt................................................................................................................................................................................................... ....................................ttacaaaacctattgtttcgcattccaaaagcggctgttttgcatggtaaaagcgtaagttttgcattacaaaagagccgctttcgcaacgtcaaatcgaaattattgtttt................................................................................................................................................................................................... Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 8.0E-38 bit: 159.0 Len: 156 Query Start:29 Query End:184 Subject Strand: POSITIVE Subject Start: 45 Subject End: 200 ............................tcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatatttt............................................................................................................................................................... ............................tcaacgctttacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgctgcaaaacagccgctttcgcaacgccaaatcgaaattaccgtttttcgtcggaattatctttacaaaacgaaagagatttt............................................................................................................................................................... Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 8.0E-38 bit: 159.0 Len: 136 Query Start:37 Query End:172 Subject Strand: NEGATIVE Subject Start: 49 Subject End: 184 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ....................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttatcactttttaacggaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 1.0E-36 bit: 155.0 Len: 138 Query Start:40 Query End:177 Subject Strand: NEGATIVE Subject Start: 85 Subject End: 222 .......................................caaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaag...................................................................................................................................................................... .......................................caaaacctattgttttgcactccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgttttcgcaatgtcaaatcgaaattattactttttaaagaaattatctttacaaaagcaaag...................................................................................................................................................................... Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270 HSP 1 e-value: 1.0E-36 bit: 155.0 Len: 102 Query Start:40 Query End:141 Subject Strand: POSITIVE Subject Start: 87 Subject End: 188 .......................................caaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaatta.......................................................................................................................................................................................................... .......................................caaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaatcgaaatta.......................................................................................................................................................................................................... Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 2.0E-35 bit: 151.0 Len: 144 Query Start:28 Query End:171 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 254 ...........................atcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ ...........................atcaacgcattataaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcagtttttaacagaattatctttacaaaa............................................................................................................................................................................ Subject: pint_PI1803_PI1804|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1737852,1738248]|397 HSP 1 e-value: 2.0E-35 bit: 151.0 Len: 132 Query Start:41 Query End:172 Subject Strand: NEGATIVE Subject Start: 265 Subject End: 396 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ........................................aaaacctattgttttgcattgtaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaatgccaaatcgaaattaccgttttctttcggaataatctttacaaaac........................................................................................................................................................................... Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 2.0E-35 bit: 151.0 Len: 136 Query Start:37 Query End:172 Subject Strand: NEGATIVE Subject Start: 145 Subject End: 280 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ....................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcattttttaagagaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 2.0E-35 bit: 151.0 Len: 144 Query Start:27 Query End:170 Subject Strand: NEGATIVE Subject Start: 480 Subject End: 623 ..........................tatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaa............................................................................................................................................................................. ..........................tatcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcatggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgccaaagcgcagttatcactttttaacagaattatctttacaaa............................................................................................................................................................................. Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 7.0E-35 bit: 149.0 Len: 147 Query Start:25 Query End:171 Subject Strand: POSITIVE Subject Start: 136 Subject End: 282 ........................tttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ ........................tttatcaacgccttacaaaacctattgttttacgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaa............................................................................................................................................................................ Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 7.0E-35 bit: 149.0 Len: 147 Query Start:26 Query End:172 Subject Strand: POSITIVE Subject Start: 82 Subject End: 228 .........................ttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... .........................ttatcaatgcattgcaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaatgccaaagcgcagttatcagtttttaacagaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 5.0E-33 bit: 143.0 Len: 136 Query Start:37 Query End:172 Subject Strand: NEGATIVE Subject Start: 165 Subject End: 300 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ....................................ttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaacagccgctttcgcaatgtcaaaacgcagttatcaatttttaagagaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 2.0E-32 bit: 141.0 Len: 107 Query Start:26 Query End:132 Subject Strand: NEGATIVE Subject Start: 348 Subject End: 454 .........................ttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaa................................................................................................................................................................................................................... .........................ttatcaacgcattacaagacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaa................................................................................................................................................................................................................... Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 2.0E-29 bit: 131.0 Len: 130 Query Start:41 Query End:170 Subject Strand: NEGATIVE Subject Start: 200 Subject End: 329 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaa............................................................................................................................................................................. ........................................aaaacctattgttttgcgttccaaaaacggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaacggaattatctttacaaa............................................................................................................................................................................. Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 2.0E-29 bit: 131.0 Len: 134 Query Start:37 Query End:170 Subject Strand: POSITIVE Subject Start: 251 Subject End: 384 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaa............................................................................................................................................................................. ....................................ttacaaaacctattgttttgcgttccaaaagtggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcactttttaagagaattatctttacaaa............................................................................................................................................................................. Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 2.0E-29 bit: 131.0 Len: 150 Query Start:28 Query End:177 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 328 ...........................atcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaag...................................................................................................................................................................... ...........................atcaacgccttacaaaacctattgtttcgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcacaaaagagccgctttcgcaacgccaaagcgcagttatcaatttttaagagaattatctttacaaaaacaaag...................................................................................................................................................................... Subject: pint_PI1981_PI1982|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1938199,1938578]|380 HSP 1 e-value: 7.0E-26 bit: 119.0 Len: 132 Query Start:41 Query End:172 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 274 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ........................................aaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgaaatgcaaaacagccgctttcgcaatgtcaaaccgaaattgctgttttttatcagaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI1958_PI1959|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1917430,1917847]|418 HSP 1 e-value: 3.0E-25 bit: 117.0 Len: 131 Query Start:41 Query End:171 Subject Strand: NEGATIVE Subject Start: 182 Subject End: 312 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ ........................................aaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgcaatgcaaaacagccgcttttgcaatgtcaaaccgaaattgctgttttttatcagaattatctttacaaaa............................................................................................................................................................................ Subject: pint_PI1915_PI1916|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1859967,1860350]|384 HSP 1 e-value: 2.0E-23 bit: 111.0 Len: 147 Query Start:25 Query End:171 Subject Strand: NEGATIVE Subject Start: 114 Subject End: 260 ........................tttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgta-ggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ ........................tttatcaatacattataaaacctattgttttgcattccaaaagcggctgttttgcaacgtaaaa-catacgcttttaccgtgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttcgtcagaattatttttacaaaa............................................................................................................................................................................ HSP 2 e-value: 4.0E-12 bit: 73.8 Len: 57 Query Start:64 Query End:120 Subject Strand: POSITIVE Subject Start: 165 Subject End: 221 ...............................................................aaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgcttt............................................................................................................................................................................................................................... ...............................................................aaagcggctgttttgcacggtaaaagcgtatgttttacgttgcaaaacagccgcttt............................................................................................................................................................................................................................... Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 3.0E-22 bit: 107.0 Len: 158 Query Start:15 Query End:172 Subject Strand: POSITIVE Subject Start: 81 Subject End: 238 ..............taacttactctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ..............taactaactcgttatcaacacattgcaaaacctattgttttgcattccaaaagcgtaggttttacacggcaaaagcggctgttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcttacgaataatctttacaaaac........................................................................................................................................................................... Subject: pint_PI0195_PI0196|epimerase/reductase:hypothetical protein|POSITIVE:POSITIVE|[188263,188574]|312 HSP 1 e-value: 4.0E-21 bit: 103.0 Len: 104 Query Start:37 Query End:140 Subject Strand: NEGATIVE Subject Start: 176 Subject End: 279 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaatt........................................................................................................................................................................................................... ....................................ttacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaatt........................................................................................................................................................................................................... Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 2.0E-20 bit: 101.0 Len: 131 Query Start:41 Query End:171 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 271 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ ........................................aaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaagagaattatctttacaaaa............................................................................................................................................................................ Subject: pint_PI1441_PI1442|hypothetical protein:radical-activating enzyme (pyruvate-formate lyase-activating enzyme)|POSITIVE:POSITIVE|[1363734,1364088]|355 HSP 1 e-value: 6.0E-20 bit: 99.6 Len: 154 Query Start:21 Query End:174 Subject Strand: POSITIVE Subject Start: 66 Subject End: 219 ....................actctttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaacca......................................................................................................................................................................... ....................actcgttatcaacgctttacaaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgctttcgcaacgtcaaatcgaaaataccgttttccttgtaaattatctttacaaaacca......................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 6.0E-20 bit: 99.6 Len: 142 Query Start:37 Query End:178 Subject Strand: NEGATIVE Subject Start: 194 Subject End: 334 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaaga..................................................................................................................................................................... ....................................ttacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcg-caaacagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaaccaaaga..................................................................................................................................................................... Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 2.0E-19 bit: 97.6 Len: 137 Query Start:41 Query End:177 Subject Strand: POSITIVE Subject Start: 233 Subject End: 368 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaag...................................................................................................................................................................... ........................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttca-atgaattatctttacaaaaccaaag...................................................................................................................................................................... Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 4.0E-18 bit: 93.7 Len: 131 Query Start:41 Query End:171 Subject Strand: NEGATIVE Subject Start: 741 Subject End: 871 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaa............................................................................................................................................................................ ........................................aaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgttgcaaaacctacgctttcgcaacgccaaatcgaaattatcatttttcttgcgaactttctttacaaaa............................................................................................................................................................................ Subject: pint_PI1688_PI1689|possible GTPase:conserved hypothetical protein|POSITIVE:POSITIVE|[1603964,1604449]|486 HSP 1 e-value: 6.0E-17 bit: 89.7 Len: 137 Query Start:41 Query End:177 Subject Strand: POSITIVE Subject Start: 174 Subject End: 310 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaag...................................................................................................................................................................... ........................................aaaacctattgttttgcattgtaaaagcgtaggttttgcacggtaaaagcggctcttttgcatcgcaaaacatacgctttcgcaacgtcaaatcgaaattatcattttccctccgaattatctttacaaaatcaaag...................................................................................................................................................................... Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 6.0E-17 bit: 89.7 Len: 105 Query Start:28 Query End:132 Subject Strand: NEGATIVE Subject Start: 226 Subject End: 330 ...........................atcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaa................................................................................................................................................................................................................... ...........................atcaatgtattacaaaacctattgttttgcattccaaaagcgtaggttttacacgataaaagcggctgttttgcgttgcaaaacagccactttcgcaatgtcaaa................................................................................................................................................................................................................... Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 104 Query Start:29 Query End:132 Subject Strand: NEGATIVE Subject Start: 230 Subject End: 333 ............................tcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaa................................................................................................................................................................................................................... ............................tcaatgcattacaaaatctattgttttgcgtcctaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgtaaaacagccgctttcgcaacgtcaaa................................................................................................................................................................................................................... Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 2.0E-16 bit: 87.7 Len: 148 Query Start:37 Query End:184 Subject Strand: NEGATIVE Subject Start: 66 Subject End: 213 ....................................ttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaagatatttt............................................................................................................................................................... ....................................ttacaaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcatcgcaaaacagccgctttcgcaatgccaaagcgcaattaccacttttcaacgaaattatctttacaaaagcaaagctatttt............................................................................................................................................................... Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 9.0E-16 bit: 85.7 Len: 139 Query Start:40 Query End:178 Subject Strand: NEGATIVE Subject Start: 134 Subject End: 272 .......................................caaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaaga..................................................................................................................................................................... .......................................caaaacctattgttttgcattgtaaaagcgtaggttttacacggtcaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaattatcattttccttacgaattatccttacaaaaccaaaga..................................................................................................................................................................... Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 2.0E-13 bit: 77.8 Len: 107 Query Start:26 Query End:132 Subject Strand: POSITIVE Subject Start: 164 Subject End: 270 .........................ttatcaatgctttacaaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaa................................................................................................................................................................................................................... .........................ttatcaacgctttgtaaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaacgtcaaa................................................................................................................................................................................................................... Subject: pint_PI1728_PI1729|ATP-dependent Clp protease, proteolytic subunit:FKBP-type peptidyl-prolyl cis-trans isomerase, trigger factor|POSITIVE:POSITIVE|[1647719,1648555]|837 HSP 1 e-value: 9.0E-10 bit: 65.9 Len: 132 Query Start:41 Query End:172 Subject Strand: POSITIVE Subject Start: 416 Subject End: 547 ........................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttt-tcatcagaattatctttacaaaac........................................................................................................................................................................... ........................................aaaacctattgtttcgcattgtaaaagagccgcttttgcacggtaaaagcggctcttttgccttgcaaaacctacgcttttgcaacgtcaaatcgaaattaccgttttctcaac-gaattatctttacaaaac........................................................................................................................................................................... Subject: pint_PI0652_PI0653|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[595853,596185]|333 HSP 1 e-value: 9.0E-10 bit: 65.9 Len: 33 Query Start:37 Query End:69 Subject Strand: NEGATIVE Subject Start: 249 Subject End: 281 ....................................ttacaaaacctattgttttgcattccaaaagcg.................................................................................................................................................................................................................................................................................. ....................................ttacaaaacctattgttttgcattccaaaagcg.................................................................................................................................................................................................................................................................................. HSP 2 e-value: 3.0E-9 bit: 63.9 Len: 44 Query Start:129 Query End:172 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 189 ................................................................................................................................caaaacgaaattattgtttttcatcagaattatctttacaaaac........................................................................................................................................................................... ................................................................................................................................caaatcgaaattatcgtttttcttcagaattatctttacaaaac........................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GAAUAUCUAUCAUUUAACUUACUCUUUAUCAAUGCUUUACAAAACCUAUUGUUUUGCAUUCCAAAAGCGGCUCUUUUGCACGGUAAAAGCGUAGGUUUUGCGUUGUAAAAGAGCCGCUUUCGCAACGUCAAAACGAAAUUAUUGUUUUUCAUCAGAAUUAUCUUUACAAAACCAAAGAUAUUUUGAGAGAUGUUUUCAGCAAUAAAAGCACAAUCUUUUCUCUAACAAAUACCUUGUAAAUCAGAAGAAGAAAUGAUAUGUUAUUUGAUGACAUCAUAUUGAAGAAAGCCCCUAAGUUUCUCGAAAUAAACUUAGGGACUUUUAAAAGAAUAUGUUUUACUUA .......(((((..((((........(((((.((((((..........(((((((((.((.(.(((((((((((((((((((...(((((....))))).)).))))))))))))))))).).)).).))))))))...(((((((((((.(((((((.((((((........))))))))))))))))).......)))))))))))))...((((((.(((.((((.....)))).....)))))))))..))))).))))..)))))....((((((...(((((.((((((((((........)))))))))).))))).....))))))......... (-88.31) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGUAAAACAUAUUCUUUUAAAAGUCCCUAAGUUUAUUUCGAGAAACUUAGGGGCUUUCUUCAAUAUGAUGUCAUCAAAUAACAUAUCAUUUCUUCUUCUGAUUUACAAGGUAUUUGUUAGAGAAAAGAUUGUGCUUUUAUUGCUGAAAACAUCUCUCAAAAUAUCUUUGGUUUUGUAAAGAUAAUUCUGAUGAAAAACAAUAAUUUCGUUUUGACGUUGCGAAAGCGGCUCUUUUACAACGCAAAACCUACGCUUUUACCGUGCAAAAGAGCCGCUUUUGGAAUGCAAAACAAUAGGUUUUGUAAAGCAUUGAUAAAGAGUAAGUUAAAUGAUAGAUAUUC .........((((((......(((((((((((((((........)))))))))))))))....)))))).((((((((..((((.(((....((((..((...(((((((..(..........((((..(((((..(((((((...(((...((((..((((((.......))))))...))))..))).))))))).)))))..))))((((((.((((.((((((((((((((((...(((.((((.......))))..)))..)))))))))))))))).)))))))))).....)..))))))).....))..))))))).))))..)))).))))... (-92.20) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 906 120 71 227 178 pint:PI0827|5end_hypothetical_protein_763991..764221_POSITIVE 879 130 81 223 174 pint:PI2046|5end_hypothetical_protein_1999030..1999260_POSITIVE 867 130 81 90 41 pint:PI2022|5end_hypothetical_protein_1978631..1978861_POSITIVE 867 130 81 182 133 pint:PI1804|5end_hypothetical_protein_1738109..1738339_POSITIVE 832 120 74 59 13 pint:PI1786|5end_hypothetical_protein_1718124..1718354_POSITIVE 827 100 51 220 171 pint:PI1333|5end_conserved_hypothetical_protein_1250777..1251007_POSITIVE 827 110 61 203 154 pint:PI0024|5end_hypothetical_protein_28378..28608_POSITIVE 826 100 51 56 7 pint:PI1204|5end_hypothetical_protein_1124430..1124660_POSITIVE 826 100 51 207 158 pint:PI0887|5end_hypothetical_protein_817536..817766_POSITIVE 826 100 51 100 51 pint:PI0867|5end_hypothetical_protein_803859..804089_POSITIVE 826 100 51 100 51 pint:PI0119|5end_hypothetical_protein_111506..111736_POSITIVE 817 110 63 48 1 pint:PI0638|5end_hypothetical_protein_582218..582448_POSITIVE 803 120 74 227 181 pint:PI0575|5end_hypothetical_protein_519561..519791_POSITIVE 789 130 81 90 41 pint:PI0322|5end_hypothetical_protein_303508..303738_POSITIVE 777 130 81 217 168 pint:PI0991|5end_conserved_hypothetical_protein_915309..915539_POSITIVE 767 130 81 71 22 pint:PI0089|5end_hypothetical_protein_88162..88392_POSITIVE 765 130 81 71 22 pint:PI0568|5end_hypothetical_protein_512950..513180_POSITIVE 758 110 64 110 64 pint:PI0978|5end_hypothetical_protein_904867..905097_POSITIVE 745 130 87 44 1 pint:PI2023|5end_hypothetical_protein_1978585..1978815_POSITIVE 745 83 41 231 189 pint:PI0695|5end_xanthine/uracil_permease_family_protein_631413..631643_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 877 110 61 147 98 pint:PI0637|3end_hypothetical_protein_582397..582547_POSITIVE 868 109 61 151 103 pint:PI0638|3end_hypothetical_protein_582402..582552_POSITIVE 841 130 81 123 74 pint:PI0819|3end_hypothetical_protein_759919..760069_POSITIVE 826 100 51 142 93 pint:PI0815|3end_hypothetical_protein_754677..754827_POSITIVE 826 100 51 142 93 pint:PI0095|3end_hypothetical_protein_91850..92000_POSITIVE 806 100 51 142 93 pint:PI0081|3end_hypothetical_protein_80700..80850_POSITIVE 801 100 51 142 93 pint:PI1252|3end_hypothetical_protein_1175440..1175590_POSITIVE 795 140 91 50 1 pint:PI0574|3end_hypothetical_protein_519444..519594_POSITIVE 788 90 41 144 95 pint:PI1797|3end_hypothetical_protein_1731559..1731709_POSITIVE 788 90 41 144 95 pint:PI0885|3end_hypothetical_protein_817563..817713_POSITIVE 788 90 41 144 95 pint:PI0866|3end_hypothetical_protein_803993..804143_POSITIVE 788 90 41 144 95 pint:PI0820|3end_hypothetical_protein_759980..760130_POSITIVE 788 90 41 144 95 pint:PI0118|3end_hypothetical_protein_111640..111790_POSITIVE 788 90 41 144 95 pint:PI0089|3end_hypothetical_protein_88355..88505_POSITIVE 770 100 51 142 93 pint:PI0568|3end_hypothetical_protein_513131..513281_POSITIVE 770 100 51 66 17 pint:PI0567|3end_hypothetical_protein_513055..513205_POSITIVE 728 90 41 144 95 pint:PI1041|3end_hypothetical_protein_960675..960825_POSITIVE 712 90 41 144 95 pint:PI1005|3end_hypothetical_protein_926481..926631_POSITIVE 696 100 51 142 93 pint:PI1155|3end_hypothetical_protein_1080352..1080502_POSITIVE 690 90 41 83 34 pint:PI0560|3end_hypothetical_protein_508910..509060_POSITIVE