Origin IGS: taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taagccaacgagagcatacacgctttctgtttgacaggaagcacatacaatagcgaaatccattcatagcacttttaaagtgttatgaatggatttttgtttataaaagcagcagcggaggtcagcacagacacattctgccttccgaatagaaaatactttttgcttccctactccattgctctctacatacctttatttcgataaaaaaacacccgaaaagtgtaaatatttttcacagacacacctattgtgtaattctcttgttatcaacgcattacaagacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaaagaaattatctttacaaagctaagaatattcttatcatctggcacaagtaataaaagagaaaactgtttgccaaataaaacattactgattctgtatttgtacacaagttttacaggcttttcaccattattatgaacactttaggaaactttgtgtaaaatccttgctgataagatatttttttgtaactttgttgtcaaaatagaatataaaatatacaaaaacgtatgcttacattaaagctcatcagtgaggaaactgaacgtgtaataaaaggtcttgaaaagaagcatttcaataatgccaaagagaccatagagaaggta Mask Tandem Repeat Region ================================================ taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Find is-nt database================================================ Query_seq: PI1029:PI1030|PI1029:PI1030:seryl-tRNA synthetase:biotin carboxyl carrier protein:->->:947266..947985 720 taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI1029:PI1030|PI1029:PI1030:seryl-tRNA synthetase:biotin carboxyl carrier protein:->->:947266..947985 720 taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI1029:PI1030|PI1029:PI1030:seryl-tRNA synthetase:biotin carboxyl carrier protein:->->:947266..947985 720 taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Predict ORF larger than 30AA ================================================ Protein_Len: 39 Strand: + Start: 11 End: 127 .......... M V S L A L L K C F F S R P F I T R S V S S L M S F N V S I R F C I F Y I L F ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 31 Strand: + Start: 221 End: 313 ............................................................................................................................................................................................................................ M C T N T E S V M F Y L A N S F L F Y Y L C Q M I R I F L A L ....................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 30 Strand: + Start: 342 End: 431 ..................................................................................................................................................................................................................................................................................................................................................... M R F G V A K A A L L R C K T Y A F T V Q N S R F W N A K Q ................................................................................................................................................................................................................................................................................................. Protein_Len: 38 Strand: + Start: 335 End: 448 .............................................................................................................................................................................................................................................................................................................................................. M I T A L W R C E S G S F A M Q N L R F Y R A K Q P L L E R K T I G L V M R ................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 223 End: 522 .............................................................................................................................................................................................................................. M Y K Y R I S N V L F G K Q F S L L L L V P D D K N I L S F V K I I S L K S D N C A L A L R K R L F C D A K P T L L P C ...................................................................................................................................................................................................... Protein_Len: 36 Strand: + Start: 489 End: 596 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M F T L F G C F F I E I K V C R E Q W S R E A K S I F Y S E G R M C L C ............................................................................................................................ Protein_Len: 40 Strand: - Start: 517 End: 636 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R F L P I Y L A I S Y P L L F Y K R N P L C F T D T S V E A A A K I F L F G N M .................................................................................... Protein_Len: 59 Strand: - Start: 389 End: 565 .................................................................................................................................................................................................................................................................................................................................................................................................... A K V T C F L R K Q F A F C Y T K Y H T S L L L I V C Y T H R H F I N V S K P H K K I S I F T H L S C H L L S A F L M ........................................................................................................................................................... Protein_Len: 60 Strand: - Start: 195 End: 572 .................................................................................................................................................................................................. K G H L V A A K P V C F L L D Q L A N I V L S N C L L H T Q S F Y K C K E P T K K D F Y L Y T S L L P T P F C F T N E M .................................................................................................................................................... Protein_Len: 36 Strand: - Start: 125 End: 232 ............................................................................................................................ K S L L T V F F Y R I L L S K V C L K R F H E Y Y H H F A Q L V Q T C M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 37 Strand: - Start: 1 End: 111 V K E I T E K A N N F H K K E L G K I V R E T E E S I L K L T L M R K Q M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 82 Start: 126 End: 155 .............................................................................................................................TTTGACAACAAAGTTACAAAAAAATATCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... PromScan Matrix: RpoD-17 Strand: - Score: 81 Start: 166 End: 195 .....................................................................................................................................................................ATGAACACTTTAGGAAACTTTGTGTAAAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 82 HP_score: -9.0 Tail_Score: -4.07568 Start: 363 End: 413 Full_Region: TTTGGCGTTGCGAAA GCGGCTCTTTTGCGATGCAAAACC TAC GCTTTTACCGTGCAAAACAGCCGC TTTTGGAACGCAAAA ..........................................................................................................................................................................................................................................................................................................................................................................GCGGCTCTTTTGCGATGCAAAACCTACGCTTTTACCGTGCAAAACAGCCGC................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 77 HP_score: -9.0 Tail_Score: -3.53012 Start: 363 End: 413 Full_Region: ttttgcgttccaaaa gcggctgttttgcacggtaaaagc gta ggttttgcatcgcaaaagagccgc tttcgcaacgccaaa ..........................................................................................................................................................................................................................................................................................................................................................................gcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgc................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 44 HP_score: -3.4 Tail_Score: -2.88427 Start: 466 End: 478 Full_Region: ATAACAAGAGAATTA CACA ATAGG TGTG TCTGTGAAAAATATT .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAATAGGTGTG.................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 45 HP_score: -3.4 Tail_Score: -2.9978 Start: 466 End: 478 Full_Region: aatatttttcacaga caca cctat tgtg taattctcttgttat .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cacacctattgtg.................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 100 HP_score: -16.0 Tail_Score: -3.80142 Start: 628 End: 662 Full_Region: TTTTATAAACAAAAA TCCATTCATAACACTT TAA AAGTGCTATGAATGGA TTTCGCTATTGTATG ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATTCATAACACTTTAAAAGTGCTATGAATGGA.......................................................... TransTerm Strand: - Conf: 100 HP_score: -18.2 Tail_Score: -5.38054 Start: 628 End: 662 Full_Region: catacaatagcgaaa tccattcatagcactt tta aagtgttatgaatgga tttttgtttataaaa ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tccattcatagcacttttaaagtgttatgaatgga.......................................................... Find igs database================================================ Query_seq: PI1029:PI1030|PI1029:PI1030:seryl-tRNA synthetase:biotin carboxyl carrier protein:->->:947266..947985 720 taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta Intra-Species Hit: Count: 54 Min: 1 Max: 720 Len: 720 Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 0.0 bit: 1344.0 Len: 720 Query Start:1 Query End:720 Subject Strand: POSITIVE Subject Start: 1 Subject End: 720 taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacnnnnnnntatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgnnnnnnnatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta taccttctctatggtctctttggcattattgaaatgcttcttttcaagaccttttattacacgttcagtttcctcactgatgagctttaatgtaagcatacgtttttgtatattttatattctattttgacaacaaagttacaaaaaaatatcttatcagcaaggattttacacaaagtttcctaaagtgttcataataatggtgaaaagcctgtaaaacttgtgtacaaatacagaatcagtaatgttttatttggcaaacagttttctcttttattacttgtgccagatgataagaatattcttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacacttttcgggtgtttttttatcgaaataaaggtatgtagagagcaatggagtagggaagcaaaaagtattttctattcggaaggcagaatgtgtctgtgctgacctccgctgctgcttttataaacaaaaatccattcataacactttaaaagtgctatgaatggatttcgctattgtatgtgcttcctgtcaaacagaaagcgtgtatgctctcgttggctta HSP 2 e-value: 4.0E-7 bit: 58.0 Len: 41 Query Start:625 Query End:665 Subject Strand: NEGATIVE Subject Start: 625 Subject End: 665 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaatccattcataacactttaaaagtgctatgaatggattt....................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aaatccattcatagcacttttaaagtgttatgaatggattt....................................................... Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409 HSP 1 e-value: 2.0E-68 bit: 262.0 Len: 188 Query Start:313 Query End:500 Subject Strand: POSITIVE Subject Start: 105 Subject End: 292 ........................................................................................................................................................................................................................................................................................................................gtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacactt............................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................................................................................................gtaaagatattttccttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaatgcgttgataacaagtaagttacacaatagttatgcctgtgaaaaatatttacactt............................................................................................................................................................................................................................ Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 1.0E-62 bit: 242.0 Len: 198 Query Start:305 Query End:502 Subject Strand: POSITIVE Subject Start: 46 Subject End: 243 ................................................................................................................................................................................................................................................................................................................ttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacactttt.......................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................ttagttttgtaaagataattccgttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacgctgatggttagatagttacgtaataggtaagcttgtgaaaaatatttacactttt.......................................................................................................................................................................................................................... Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 6.0E-62 bit: 240.0 Len: 145 Query Start:310 Query End:454 Subject Strand: NEGATIVE Subject Start: 137 Subject End: 281 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataa.......................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgtaaaacaataggttttgtaaggcgttgataa.......................................................................................................................................................................................................................................................................... Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 9.0E-61 bit: 236.0 Len: 143 Query Start:310 Query End:452 Subject Strand: POSITIVE Subject Start: 112 Subject End: 254 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgat............................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat............................................................................................................................................................................................................................................................................ Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 3.0E-60 bit: 234.0 Len: 150 Query Start:304 Query End:453 Subject Strand: POSITIVE Subject Start: 474 Subject End: 623 ...............................................................................................................................................................................................................................................................................................................cttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgata........................................................................................................................................................................................................................................................................... ...............................................................................................................................................................................................................................................................................................................cttaactttgtaaagataattctgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccatgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgata........................................................................................................................................................................................................................................................................... Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 8.0E-58 bit: 226.0 Len: 142 Query Start:311 Query End:452 Subject Strand: POSITIVE Subject Start: 170 Subject End: 311 ......................................................................................................................................................................................................................................................................................................................ttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgat............................................................................................................................................................................................................................................................................ ......................................................................................................................................................................................................................................................................................................................ttgtaaagataattccgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcattgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgat............................................................................................................................................................................................................................................................................ Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 3.0E-57 bit: 224.0 Len: 145 Query Start:310 Query End:454 Subject Strand: POSITIVE Subject Start: 114 Subject End: 258 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataa.......................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttgaaaaatggtaatttcgatttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgttgataa.......................................................................................................................................................................................................................................................................... Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 5.0E-56 bit: 220.0 Len: 135 Query Start:309 Query End:443 Subject Strand: POSITIVE Subject Start: 148 Subject End: 282 ....................................................................................................................................................................................................................................................................................................................ctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaa..................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................ctttgtaaagataattccgttaaaaagtgataaccgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa..................................................................................................................................................................................................................................................................................... Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 2.0E-55 bit: 218.0 Len: 146 Query Start:310 Query End:455 Subject Strand: NEGATIVE Subject Start: 81 Subject End: 226 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataac......................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttggcattgcgaaagcggctcttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgcaatgcattgataac......................................................................................................................................................................................................................................................................... Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 8.0E-55 bit: 216.0 Len: 133 Query Start:304 Query End:436 Subject Strand: POSITIVE Subject Start: 194 Subject End: 326 ...............................................................................................................................................................................................................................................................................................................cttagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ ...............................................................................................................................................................................................................................................................................................................cttaactttgtaaagataattccgttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgtttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 1.0E-53 bit: 212.0 Len: 143 Query Start:310 Query End:452 Subject Strand: NEGATIVE Subject Start: 82 Subject End: 224 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgat............................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctgttaaaaactgataactgcgctttgacgttgcgaaagcggctcttttacgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgtaatacgttgat............................................................................................................................................................................................................................................................................ Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 8.0E-52 bit: 206.0 Len: 136 Query Start:308 Query End:443 Subject Strand: POSITIVE Subject Start: 58 Subject End: 193 ...................................................................................................................................................................................................................................................................................................................gctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaa..................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................gctttgtaaagataattctgttaaaaagtgacaactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttagaatgcaaaacaataggttttgtaa..................................................................................................................................................................................................................................................................................... Subject: pint_PI1408_PI1409|glucose-1-phosphate thymidylyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1329822,1330988]|1167 HSP 1 e-value: 5.0E-50 bit: 200.0 Len: 189 Query Start:310 Query End:498 Subject Strand: NEGATIVE Subject Start: 638 Subject End: 826 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacac.............................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaaaataattctgttaaaaagtgataactgtactttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatacaaaacaataggttttgtaatgagctgatagatagtgaattatgcaacagttatgtttgtgaaaaatatttacac.............................................................................................................................................................................................................................. Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386 HSP 1 e-value: 2.0E-49 bit: 198.0 Len: 136 Query Start:309 Query End:444 Subject Strand: POSITIVE Subject Start: 214 Subject End: 349 ....................................................................................................................................................................................................................................................................................................................ctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaat.................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................ctttgtaaagattattctcttaaaaagtgataactgcgttttgacgatgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaat.................................................................................................................................................................................................................................................................................... Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 8.0E-49 bit: 196.0 Len: 143 Query Start:310 Query End:452 Subject Strand: POSITIVE Subject Start: 186 Subject End: 328 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgat............................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgctttggcgttgcgaaagcggctcttttgtgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcgaaacaataggttttgtaaggcgttgat............................................................................................................................................................................................................................................................................ Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 138 Query Start:310 Query End:447 Subject Strand: POSITIVE Subject Start: 167 Subject End: 304 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcg................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg................................................................................................................................................................................................................................................................................. Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 149 Query Start:310 Query End:458 Subject Strand: NEGATIVE Subject Start: 92 Subject End: 240 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaag...................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaaaataattccgttaaaaagcgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataacacattgataacaag...................................................................................................................................................................................................................................................................... Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 161 Query Start:310 Query End:470 Subject Strand: NEGATIVE Subject Start: 57 Subject End: 217 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaa.......................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagattatttctttagaaaatggtaatttcgatttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaacacgttgataacaagacgattacacaa.......................................................................................................................................................................................................................................................... Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 5.0E-47 bit: 190.0 Len: 136 Query Start:308 Query End:443 Subject Strand: NEGATIVE Subject Start: 251 Subject End: 386 ...................................................................................................................................................................................................................................................................................................................gctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaa..................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................gctttgtaaagataattctcttaaaaagtgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccacttttggaacgcaaaacaataggttttgtaa..................................................................................................................................................................................................................................................................................... Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 2.0E-46 bit: 188.0 Len: 135 Query Start:310 Query End:444 Subject Strand: POSITIVE Subject Start: 147 Subject End: 281 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaat.................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat.................................................................................................................................................................................................................................................................................... Subject: pint_PI1271_PI1272|transcriptional regulator, AraC/XylS family:possible transcriptional regulator|POSITIVE:POSITIVE|[1191345,1191841]|497 HSP 1 e-value: 2.0E-46 bit: 188.0 Len: 123 Query Start:306 Query End:428 Subject Strand: POSITIVE Subject Start: 253 Subject End: 375 .................................................................................................................................................................................................................................................................................................................tagctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaa.................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................tagctttgtaaatataattccgttaaaaagtgataactgcgctttaacgttgcgaaagcggttcttttgcgatgcaaaacctacgcttttaccgtacaaaacagccgcttttggaacgcaaaa.................................................................................................................................................................................................................................................................................................... Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 2.0E-46 bit: 188.0 Len: 127 Query Start:310 Query End:436 Subject Strand: NEGATIVE Subject Start: 308 Subject End: 434 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctcttaaaaagtgataactgcgctttgacgttgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggt............................................................................................................................................................................................................................................................................................ Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 3.0E-45 bit: 184.0 Len: 145 Query Start:309 Query End:453 Subject Strand: NEGATIVE Subject Start: 373 Subject End: 517 ....................................................................................................................................................................................................................................................................................................................ctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgata........................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................ctttgtaaagataattctgatgaaaaatgataatttcgatttggcattgcgaaagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgata........................................................................................................................................................................................................................................................................... Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 188 Query Start:310 Query End:497 Subject Strand: POSITIVE Subject Start: 115 Subject End: 302 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttaca............................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagattattctgttaaaaagcgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttagcgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaacgcattgacagcgagtaagttatacgattggtgtgcttgtgaaaaatatttaca............................................................................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 2.0E-40 bit: 168.0 Len: 141 Query Start:310 Query End:450 Subject Strand: POSITIVE Subject Start: 202 Subject End: 341 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttg.............................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctgttt-gcgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaatgcgttg.............................................................................................................................................................................................................................................................................. Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 7.0E-40 bit: 167.0 Len: 164 Query Start:310 Query End:473 Subject Strand: POSITIVE Subject Start: 11 Subject End: 174 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaatag....................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattccgaagaaaaatgataatttcgatttgacgttgcgaaagtggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcaaaacaataggttttgtaatgcgttgatagaaagagagttatacaatag....................................................................................................................................................................................................................................................... Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 3.0E-39 bit: 165.0 Len: 127 Query Start:310 Query End:436 Subject Strand: NEGATIVE Subject Start: 101 Subject End: 227 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctgttaaaaactgataactgcgttttgacattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 150 Query Start:310 Query End:459 Subject Strand: POSITIVE Subject Start: 192 Subject End: 341 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaaga..................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttcgttaaaaagtgataactgcactttgacgttgcgaaagcggctgttttacgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttaggacgcaaaacaatagattttgtaatgcattgacaacaaga..................................................................................................................................................................................................................................................................... Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 142 Query Start:310 Query End:451 Subject Strand: POSITIVE Subject Start: 92 Subject End: 233 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttga............................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtaataatttcgatttgacattgcgaaaacggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggagtgcaaaacaataggttttgcaatacgttga............................................................................................................................................................................................................................................................................. Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 4.0E-38 bit: 161.0 Len: 137 Query Start:310 Query End:446 Subject Strand: POSITIVE Subject Start: 142 Subject End: 278 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgc.................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattctcttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttataatgc.................................................................................................................................................................................................................................................................................. Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 2.0E-37 bit: 159.0 Len: 144 Query Start:310 Query End:453 Subject Strand: NEGATIVE Subject Start: 397 Subject End: 540 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgata........................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattacattgaaaattgataatttcgttttgacgttgcgaaagcggctgttttgcgaggtaaaacctacgcttttgccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaacacgttgata........................................................................................................................................................................................................................................................................... Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 4.0E-35 bit: 151.0 Len: 144 Query Start:310 Query End:453 Subject Strand: POSITIVE Subject Start: 80 Subject End: 223 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgata........................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata........................................................................................................................................................................................................................................................................... Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 4.0E-35 bit: 151.0 Len: 144 Query Start:310 Query End:453 Subject Strand: POSITIVE Subject Start: 216 Subject End: 359 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgata........................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttcgctgaaaaacgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttacaatacgttgata........................................................................................................................................................................................................................................................................... Subject: pint_PI0191_PI0192|O-methyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[181846,182270]|425 HSP 1 e-value: 2.0E-33 bit: 145.0 Len: 109 Query Start:345 Query End:453 Subject Strand: NEGATIVE Subject Start: 168 Subject End: 276 ........................................................................................................................................................................................................................................................................................................................................................cgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgata........................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................cgctttcgctttgcaatagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgtaacgcgctgata........................................................................................................................................................................................................................................................................... Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 4.0E-32 bit: 141.0 Len: 107 Query Start:348 Query End:454 Subject Strand: NEGATIVE Subject Start: 26 Subject End: 132 ...........................................................................................................................................................................................................................................................................................................................................................tttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataa.......................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................tttgacgttgcgaaagcggctcttttacaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgtaaagcattgataa.......................................................................................................................................................................................................................................................................... Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 4.0E-32 bit: 141.0 Len: 147 Query Start:308 Query End:454 Subject Strand: NEGATIVE Subject Start: 164 Subject End: 310 ...................................................................................................................................................................................................................................................................................................................gctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataa.......................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................gctttgtaaagataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttacaaagcgttgataa.......................................................................................................................................................................................................................................................................... Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 6.0E-31 bit: 137.0 Len: 137 Query Start:310 Query End:446 Subject Strand: POSITIVE Subject Start: 156 Subject End: 292 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgc.................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattcgttaagaaaacgataatttcgatttgacgttgcgaaagctgctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataatgc.................................................................................................................................................................................................................................................................................. Subject: pint_PI1909_PI1910|DNA gyrase, B subunit:hypothetical protein|POSITIVE:POSITIVE|[1855331,1855917]|587 HSP 1 e-value: 1.0E-28 bit: 129.0 Len: 145 Query Start:310 Query End:454 Subject Strand: NEGATIVE Subject Start: 332 Subject End: 476 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataa.......................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataacattgttaaaaagtgataactgcgctttgacattgcgaaagcgtaggttttgcgatgcaaaagcgccacttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgcaatgcgttgataa.......................................................................................................................................................................................................................................................................... Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 9.0E-27 bit: 123.0 Len: 134 Query Start:310 Query End:443 Subject Strand: NEGATIVE Subject Start: 328 Subject End: 461 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaa..................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattcgttaagaaaacgataatttcgatttgacgttgcgaaagcagctcttttgcaacgcaaaacctatgcttttaccgtgcaaaacagccgcttttaggatgcaaaacaataggttttgtaa..................................................................................................................................................................................................................................................................................... Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 2.0E-21 bit: 105.0 Len: 133 Query Start:312 Query End:444 Subject Strand: POSITIVE Subject Start: 190 Subject End: 322 .......................................................................................................................................................................................................................................................................................................................tgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaat.................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................tgtaaaaataattccgttaaaaagtaataactgcgctttgacattgcgaaagtggctgttttgcaacgcaaaacagccgcttttatcgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat.................................................................................................................................................................................................................................................................................... Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 8.0E-21 bit: 103.0 Len: 104 Query Start:348 Query End:451 Subject Strand: NEGATIVE Subject Start: 45 Subject End: 148 ...........................................................................................................................................................................................................................................................................................................................................................tttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttga............................................................................................................................................................................................................................................................................. ...........................................................................................................................................................................................................................................................................................................................................................tttggcgttgcgaaagcggctgttttgcagcgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaaagcgttga............................................................................................................................................................................................................................................................................. Subject: pint_PI1588_PI1589|DNA polymerase III, epsilon chain:conserved hypothetical protein|POSITIVE:POSITIVE|[1516991,1517497]|507 HSP 1 e-value: 1.0E-19 bit: 99.6 Len: 122 Query Start:310 Query End:431 Subject Strand: POSITIVE Subject Start: 227 Subject End: 348 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaa................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaaaataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcacgccaaaagcggctcttttaccttgcaaaacagccgcttttggaacgcaaaacaa................................................................................................................................................................................................................................................................................................. Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479 HSP 1 e-value: 1.0E-19 bit: 99.6 Len: 126 Query Start:311 Query End:436 Subject Strand: POSITIVE Subject Start: 113 Subject End: 238 ......................................................................................................................................................................................................................................................................................................................ttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ ......................................................................................................................................................................................................................................................................................................................ttgtaaaaataattccgttaaaaagtgataactgccttttgacattgcaaaagcagctgttttacgatgcaaaacaaccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggt............................................................................................................................................................................................................................................................................................ Subject: pint_PI1441_PI1442|hypothetical protein:radical-activating enzyme (pyruvate-formate lyase-activating enzyme)|POSITIVE:POSITIVE|[1363734,1364088]|355 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 108 Query Start:348 Query End:455 Subject Strand: NEGATIVE Subject Start: 70 Subject End: 177 ...........................................................................................................................................................................................................................................................................................................................................................tttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataac......................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................tttgacgttgcgaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttgtaaagcgttgataac......................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:360 Query End:394 Subject Strand: POSITIVE Subject Start: 131 Subject End: 165 .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406 HSP 1 e-value: 3.0E-17 bit: 91.7 Len: 122 Query Start:310 Query End:431 Subject Strand: NEGATIVE Subject Start: 199 Subject End: 320 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaa................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattcccttaaaaaaggataactgcgctttggcattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaa................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:360 Query End:394 Subject Strand: POSITIVE Subject Start: 236 Subject End: 270 .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcaacgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 125 Query Start:331 Query End:455 Subject Strand: NEGATIVE Subject Start: 91 Subject End: 215 ..........................................................................................................................................................................................................................................................................................................................................aaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataac......................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................aaaaatgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacagccgcttttgccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgcaatgtgttgataac......................................................................................................................................................................................................................................................................... Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 5.0E-16 bit: 87.7 Len: 172 Query Start:331 Query End:502 Subject Strand: POSITIVE Subject Start: 763 Subject End: 934 ..........................................................................................................................................................................................................................................................................................................................................aaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttacactttt.......................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................................................................................................................................aaaaatgataatttcgatttggcgttgcgaaagcgtaggttttgcaacgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttataatatgttgataaacagaaagttatgcgatagttgcatctgtgaaaaatatttacagtttt.......................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:360 Query End:394 Subject Strand: NEGATIVE Subject Start: 792 Subject End: 826 .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1937_PI1938|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1891147,1891993]|847 HSP 1 e-value: 5.0E-13 bit: 77.8 Len: 127 Query Start:309 Query End:435 Subject Strand: POSITIVE Subject Start: 502 Subject End: 628 ....................................................................................................................................................................................................................................................................................................................ctttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaatagg............................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................................................................................................................ctttataaagataattctgttaaaaagcgataactgcgctttggcgttgcgaaagcgtaacttttgcacgccaaaagagccgcttttaccttgcaaaacctacgcttttagaacgtaaaacaatagg............................................................................................................................................................................................................................................................................................. Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 5.0E-13 bit: 77.8 Len: 127 Query Start:310 Query End:436 Subject Strand: POSITIVE Subject Start: 145 Subject End: 271 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattcgttgaaaaaatgataatttcgatttgacattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggt............................................................................................................................................................................................................................................................................................ HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:360 Query End:394 Subject Strand: NEGATIVE Subject Start: 195 Subject End: 229 .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcaacgcaaaacctacgcttt...................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415 HSP 1 e-value: 5.0E-13 bit: 77.8 Len: 127 Query Start:310 Query End:436 Subject Strand: NEGATIVE Subject Start: 182 Subject End: 308 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggt............................................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattttattaaaaagtggcaattgcgttttgacattgcaaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcgaaacaataggt............................................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 36 Query Start:360 Query End:395 Subject Strand: POSITIVE Subject Start: 224 Subject End: 259 .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt..................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 8.0E-12 bit: 73.8 Len: 188 Query Start:310 Query End:497 Subject Strand: NEGATIVE Subject Start: 175 Subject End: 361 .....................................................................................................................................................................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataa-caagagaattacacaataggtgtgtctgtgaaaaatatttaca............................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................tttgtaaagataattcattgaaaaac-gataatttcgatttggcattgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacacttttggaatgcaaaacaataggttttataatacactgacaagcaatag-gttacacaatagttgtgcttgtgaaaaatatttaca............................................................................................................................................................................................................................... Subject: pint_PI1324_PI1325|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1243086,1243554]|469 HSP 1 e-value: 3.0E-11 bit: 71.9 Len: 144 Query Start:311 Query End:454 Subject Strand: NEGATIVE Subject Start: 247 Subject End: 390 ......................................................................................................................................................................................................................................................................................................................ttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataa.......................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................ttgtaaaaataattctgttaaaaagtgataactgcactttggcattgtaaaagcggctgttttgcatcgcaaaacagccgcttttggctggtaaaagagccgcttttacaatgtaaaacaataggttttgtaattcgttgataa.......................................................................................................................................................................................................................................................................... Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 5.0E-10 bit: 67.9 Len: 150 Query Start:348 Query End:497 Subject Strand: POSITIVE Subject Start: 180 Subject End: 329 ...........................................................................................................................................................................................................................................................................................................................................................tttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgataacaagagaattacacaataggtgtgtctgtgaaaaatatttaca............................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................................................................................................................................................tttggcattgcgaaagcggctgttttgcatcgcaaaacagccgctttgaccgtgtaaaacctacgcttttacaatgcaaaacaataggttttgcattgcgttgataatgagaatgttatacaataggtattcttgtgaaaaatatttaca............................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UACCUUCUCUAUGGUCUCUUUGGCAUUAUUGAAAUGCUUCUUUUCAAGACCUUUUAUUACACGUUCAGUUUCCUCACUGAUGAGCUUUAAUGUAAGCAUACGUUUUUGUAUAUUUUAUAUUCUAUUUUGACAACAAAGUUACAAAAAAAUAUCUUAUCAGCAAGGAUUUUACACAAAGUUUCCUAAAGUGUUCAUAAUAAUGGUGAAAAGCCUGUAAAACUUGUGUACAAAUACAGAAUCAGUAAUGUUUUAUUUGGCAAACAGUUUUCUCUUUUAUUACUUGUGCCAGAUGAUAAGAAUAUUCUUAGCUUUGUAAAGAUAAUUUCUUUAAAAAGUGAUAACUGCGCUUUGGCGUUGCGAAAGCGGCUCUUUUGCGAUGCAAAACCUACGCUUUUACCGUGCAAAACAGCCGCUUUUGGAACGCAAAACAAUAGGUCUUGUAAUGCGUUGAUAACAAGAGAAUUACACAAUAGGUGUGUCUGUGAAAAAUAUUUACACUUUUCGGGUGUUUUUUUAUCGAAAUAAAGGUAUGUAGAGAGCAAUGGAGUAGGGAAGCAAAAAGUAUUUUCUAUUCGGAAGGCAGAAUGUGUCUGUGCUGACCUCCGCUGCUGCUUUUAUAAACAAAAAUCCAUUCAUAACACUUUAAAAGUGCUAUGAAUGGAUUUCGCUAUUGUAUGUGCUUCCUGUCAAACAGAAAGCGUGUAUGCUCUCGUUGGCUUA ((((((((((...(((.....))).(((((..(((((.......((((((((..((((((..((((....((((..(((((((((((......)))).....((((((((.(((((....((......))....)))))))))))))......)))))))..))))...(((((((.((((.........(((((.......))))).........)))))))))))........))))..))))))..((((((((((...(((.............)))..)))))))))).(((..........(((((.((((((.....)))))).)))))..........)))..(((((.(((((((((((.(((((((....((((.......))))....))))))).))))))))))).)))))........))))))))....))))))))))..)))))...((((...(((((((..(((.....)))..))))))).....))))................)))))....((((((....((((((..((((.....)).))..)))))).((((((((...(((((......)))....))..))))))))........(((((((((((((.((((.....)))).))))))))))))).......(((..(((((.(((.....))).)))))..)))))))))......... (-194.64) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGCCAACGAGAGCAUACACGCUUUCUGUUUGACAGGAAGCACAUACAAUAGCGAAAUCCAUUCAUAGCACUUUUAAAGUGUUAUGAAUGGAUUUUUGUUUAUAAAAGCAGCAGCGGAGGUCAGCACAGACACAUUCUGCCUUCCGAAUAGAAAAUACUUUUUGCUUCCCUACUCCAUUGCUCUCUACAUACCUUUAUUUCGAUAAAAAAACACCCGAAAAGUGUAAAUAUUUUUCACAGACACACCUAUUGUGUAAUUCUCUUGUUAUCAACGCAUUACAAGACCUAUUGUUUUGCGUUCCAAAAGCGGCUGUUUUGCACGGUAAAAGCGUAGGUUUUGCAUCGCAAAAGAGCCGCUUUCGCAACGCCAAAGCGCAGUUAUCACUUUUUAAAGAAAUUAUCUUUACAAAGCUAAGAAUAUUCUUAUCAUCUGGCACAAGUAAUAAAAGAGAAAACUGUUUGCCAAAUAAAACAUUACUGAUUCUGUAUUUGUACACAAGUUUUACAGGCUUUUCACCAUUAUUAUGAACACUUUAGGAAACUUUGUGUAAAAUCCUUGCUGAUAAGAUAUUUUUUUGUAACUUUGUUGUCAAAAUAGAAUAUAAAAUAUACAAAAACGUAUGCUUACAUUAAAGCUCAUCAGUGAGGAAACUGAACGUGUAAUAAAAGGUCUUGAAAAGAAGCAUUUCAAUAAUGCCAAAGAGACCAUAGAGAAGGUA .........(((((((.....((((((((.....)))))))).........((((((((((((((((((((((.....))))))))))))))).))))))).....((((((..(((((.(((......)))....))))).(((......)))........))))))...........)))))))....(((((((....................((((((((....))))))))....(((((.....)))))...((((((...............((((((((.(((((.(((((((..(((((((((.((((((...((((((.(...).))))))...)))))).)))))))))......((((..............((((.((((((.....)))))).)))).(((((....))))).....))))....(((((((..(.(((((.(((((........)))))........((((((((((....)))))...))))).))))).)..)))))))..((((...((....))..))))....((((..(((((...((((.((((((((..(((((..((......))..)))))...)))))))).))))((((......))))..)))))..))))....))))))).))))).)))))))).......(((((.....)))))..)))))).......))))))) (-195.30) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1034 390 341 211 162 pint:PI2003|5end_hypothetical_protein_1960823..1961053_POSITIVE 1034 390 341 50 1 pint:PI2002|5end_hypothetical_protein_1960662..1960892_POSITIVE 978 390 341 181 132 pint:PI0771|5end_conserved_hypothetical_protein_706524..706754_POSITIVE 961 410 361 58 9 pint:PI1129|5end_hypothetical_protein_1055377..1055607_POSITIVE 959 390 341 50 1 pint:PI1694|5end_hypothetical_protein_1609717..1609947_POSITIVE 938 420 371 80 31 pint:PI1346|5end_hypothetical_protein_1260814..1261044_POSITIVE 938 420 371 52 3 pint:PI0061|5end_hypothetical_protein_60500..60730_POSITIVE 938 420 371 52 3 pint:PI0004|5end_hypothetical_protein_6199..6429_POSITIVE 921 400 351 60 11 pint:PI1601|5end_hypothetical_protein_1530282..1530512_POSITIVE 919 400 353 48 1 pint:PI2144|5end_hypothetical_protein_2091954..2092184_POSITIVE 914 420 371 80 31 pint:PI2153|5end_hypothetical_protein_2099392..2099622_POSITIVE 914 420 371 206 157 pint:PI0788|5end_3-methyladenine_DNA_glycosylase_(DNA-3-methyladenine_glycosylase_I)_726152..726382_POSITIVE 912 400 351 60 11 pint:PI1934|5end_hypothetical_protein_1882363..1882593_POSITIVE 912 400 351 68 19 pint:PI1168|5end_hypothetical_protein_1089696..1089926_POSITIVE 912 400 351 60 11 pint:PI1167|5end_hypothetical_protein_1089688..1089918_POSITIVE 910 400 351 60 11 pint:PI1829|5end_hypothetical_protein_1769255..1769485_POSITIVE 885 420 371 80 31 pint:PI1567|5end_hypothetical_protein_1489229..1489459_POSITIVE 885 390 341 99 50 pint:PI0055|5end_hypothetical_protein_54815..55045_POSITIVE 881 430 384 47 1 pint:PI1905|5end_hypothetical_protein_1847628..1847858_POSITIVE 880 379 331 219 171 pint:PI0202|5end_DNA_helicase_191753..191983_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1002 390 341 92 43 pint:PI0759|3end_hypothetical_protein_693998..694148_POSITIVE 962 400 351 142 93 pint:PI1814|3end_hypothetical_protein_1753233..1753383_POSITIVE 961 410 361 53 4 pint:PI0996|3end_hypothetical_protein_920660..920810_POSITIVE 954 390 341 132 83 pint:PI0061|3end_hypothetical_protein_60690..60840_POSITIVE 950 400 351 142 93 pint:PI0689|3end_hypothetical_protein_625877..626027_POSITIVE 921 400 352 116 68 pint:PI1356|3end_hypothetical_protein_1273340..1273490_POSITIVE 912 400 351 142 93 pint:PI1340|3end_hypothetical_protein_1256872..1257022_POSITIVE 908 430 381 132 83 pint:PI1141|3end_hypothetical_protein_1069713..1069863_POSITIVE 905 399 351 151 103 pint:PI1601|3end_hypothetical_protein_1530454..1530604_POSITIVE 900 390 341 136 87 pint:PI1922|3end_hypothetical_protein_1865454..1865604_POSITIVE 883 420 371 63 14 pint:PI0054|3end_hypothetical_protein_54829..54979_POSITIVE 880 379 331 121 73 pint:PI0200|3end_hypothetical_protein_191735..191885_POSITIVE 846 409 361 151 103 pint:PI0670|3end_hypothetical_protein_611280..611430_POSITIVE 840 380 331 122 73 pint:PI0158|3end_hypothetical_protein_151298..151448_POSITIVE 832 430 386 45 1 pint:PI0688|3end_hypothetical_protein_625750..625900_POSITIVE 827 390 341 132 83 pint:PI0004|3end_hypothetical_protein_6389..6539_POSITIVE 821 390 341 142 93 pint:PI1076|3end_hypothetical_protein_999065..999215_POSITIVE 797 440 392 49 1 pint:PI0669|3end_hypothetical_protein_611147..611297_POSITIVE 766 400 351 136 87 pint:PI0182|3end_hypothetical_protein_174277..174427_POSITIVE 759 369 323 151 106 pint:PI0104|3end_hypothetical_protein_99346..99496_POSITIVE