Origin IGS: taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taaagcattcgcacaataaataaagagagtagaaagaaaaccgtaaaacggacagtctttctactcttttttattttcagctttctcatttcagcttcttacagaccagtaaaactcaatggaaacaacctactttatgaacgaaaagaagactataaagctgtaaatatttttcacaagcaccactattaaataacaatctgtgtatcaacacattacaaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcatcgcaaaacagccgctttcgcaatgccaaagcgcaattaccacttttcaacgaaattatctttacaaaagcaaagctatttttcggcaaaattctgaggcaaaataaagaaaatcaatccaccgaaaatatcaacttctccttctta Mask Tandem Repeat Region ================================================ taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Find is-nt database================================================ Query_seq: PI0945:PI0946|PI0945:PI0946:sodium:solute symporter family protein:glutathione peroxidase:->->:877685..878112 428 taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI0945:PI0946|PI0945:PI0946:sodium:solute symporter family protein:glutathione peroxidase:->->:877685..878112 428 taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI0945:PI0946|PI0945:PI0946:sodium:solute symporter family protein:glutathione peroxidase:->->:877685..878112 428 taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Predict ORF larger than 30AA ================================================ Protein_Len: 38 Strand: + Start: 105 End: 218 ........................................................................................................ M V I A L W H C E S G C F A M Q K S R F Y R V K P T L L E C K T I G F V M C .................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 56 End: 310 ....................................................... M L P K N S F A F V K I I S L K S G N C A L A L R K R L F C D A K E P L L P C K T Y A F G M Q N N R F C N V L I H R L L ...................................................................................................................... Protein_Len: 60 Strand: - Start: 240 End: 422 ............................................................................................................................................................................................................................................... H H K H F I N V A K Y D E K R E Y L L N N G N L K V P R Y S A S I L F S F I F F L L F V T R K V T K K R S E K N I T R M ...... Protein_Len: 60 Strand: - Start: 54 End: 236 ..................................................... K A S F Y S Q K Q L S L K T S F H Y N R K P M A F A A T K R H L L A A K V T Y F R R K Q F A F C Y T K Y H T S V C I T M ................................................................................................................................................................................................ Protein_Len: 35 Strand: - Start: 44 End: 148 ........................................... K A E S N Q R F I A K S K Y L Y N R Q F T T I A S Q C Q S L P Q K A M ........................................................................................................................................................................................................................................................................................ Protein_Len: 31 Strand: - Start: 1 End: 93 L F S F N I N E T S Q N E K N Q R L I K G F F L K A K T F I M ............................................................................................................................................................................................................................................................................................................................................... taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 100 HP_score: -16.1 Tail_Score: -4.16943 Start: 133 End: 161 Full_Region: TTTGGCATTGCGAAA GCGGCTGTTTTGC GAT GCAAAAGAGCCGC TTTTACCGTGTAAAA ....................................................................................................................................GCGGCTGTTTTGCGATGCAAAAGAGCCGC........................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -16.1 Tail_Score: -3.57144 Start: 133 End: 161 Full_Region: ttttacacggtaaaa gcggctcttttgc atc gcaaaacagccgc tttcgcaatgccaaa ....................................................................................................................................gcggctcttttgcatcgcaaaacagccgc........................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 51 HP_score: -5.2 Tail_Score: -2.77148 Start: 194 End: 210 Full_Region: TACGCTTTTGGAATG CAAAAC AATAG GTTTTG TAATGTGTTGATACA .................................................................................................................................................................................................CAAAACAATAGGTTTTG.......................................................................................................................................................................................................................... TransTerm Strand: + Conf: 79 HP_score: -8.0 Tail_Score: -3.97183 Start: 363 End: 402 Full_Region: GCTGAAAATAAAAAA GAGTAGAAAGACTGTCCGT TTT ACGGTTTTCTTTCTACTC TCTTTATTTATTGTG ..........................................................................................................................................................................................................................................................................................................................................................................GAGTAGAAAGACTGTCCGTTTTACGGTTTTCTTTCTACTC.......................... TransTerm Strand: - Conf: 93 HP_score: -5.8 Tail_Score: -5.79595 Start: 363 End: 402 Full_Region: cacaataaataaaga gagtagaaagaaaaccgt aaa acggacagtctttctactc ttttttattttcagc ..........................................................................................................................................................................................................................................................................................................................................................................gagtagaaagaaaaccgtaaaacggacagtctttctactc.......................... TransTerm Strand: + Conf: 84 HP_score: -6.8 Tail_Score: -5.03227 Start: 378 End: 388 Full_Region: GAGTAGAAAGACTGT CCGT TTT ACGG TTTTCTTTCTACTCT .........................................................................................................................................................................................................................................................................................................................................................................................CCGTTTTACGG........................................ Find igs database================================================ Query_seq: PI0945:PI0946|PI0945:PI0946:sodium:solute symporter family protein:glutathione peroxidase:->->:877685..878112 428 taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Intra-Species Hit: Count: 58 Min: 1 Max: 428 Len: 428 Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 0.0 bit: 848.0 Len: 428 Query Start:1 Query End:428 Subject Strand: POSITIVE Subject Start: 1 Subject End: 428 taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta taagaaggagaagttgatattttcggtggattgattttctttattttgcctcagaattttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccattgagttttactggtctgtaagaagctgaaatgagaaagctgaaaataaaaaagagtagaaagactgtccgttttacggttttctttctactctctttatttattgtgcgaatgcttta Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 7.0E-51 bit: 202.0 Len: 233 Query Start:79 Query End:311 Subject Strand: POSITIVE Subject Start: 144 Subject End: 376 ..............................................................................ttttgtaaagataatttcgttgaaaag-tggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaagtaggttgtttccatt..................................................................................................................... ..............................................................................ttttgtaaagataatt-cgttgaaaaaatgataatttcgatttgacattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgcaaagtcttgatagtgagatagttatgcaatggttacgcttgtgaaaaatatttacacttttattatcttcttttcgttcataaagtgggttgttcccatt..................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 3.0E-47 bit: 190.0 Len: 148 Query Start:73 Query End:220 Subject Strand: POSITIVE Subject Start: 195 Subject End: 341 ........................................................................ctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttg................................................................................................................................................................................................................ ........................................................................ctttggttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctgttt-gcgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaatgcgttg................................................................................................................................................................................................................ Subject: pint_PI1909_PI1910|DNA gyrase, B subunit:hypothetical protein|POSITIVE:POSITIVE|[1855331,1855917]|587 HSP 1 e-value: 2.0E-45 bit: 184.0 Len: 189 Query Start:79 Query End:267 Subject Strand: NEGATIVE Subject Start: 289 Subject End: 477 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttaca................................................................................................................................................................. ..............................................................................ttttgtaaagataacattgttaaaaagtgataactgcgctttgacattgcgaaagcgtaggttttgcgatgcaaaagcgccacttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgcaatgcgttgataaacagatgattacgtggttgttgtgcttgtgaaaaatatttaca................................................................................................................................................................. Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 7.0E-45 bit: 182.0 Len: 168 Query Start:100 Query End:267 Subject Strand: NEGATIVE Subject Start: 49 Subject End: 216 ...................................................................................................gaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttaca................................................................................................................................................................. ...................................................................................................gaaaaatgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacagccgcttttgccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgcaatgtgttgataacgagttagttatgtaatatctttgcttgtgaaaaatatttaca................................................................................................................................................................. HSP 2 e-value: 4.0E-6 bit: 54.0 Len: 35 Query Start:130 Query End:164 Subject Strand: POSITIVE Subject Start: 152 Subject End: 186 .................................................................................................................................aaagcggctgttttgcgatgcaaaagagccgcttt........................................................................................................................................................................................................................................................................ .................................................................................................................................aaagcggctgttttgcgttgcaaaacagccgcttt........................................................................................................................................................................................................................................................................ Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 6.0E-42 bit: 172.0 Len: 191 Query Start:82 Query End:272 Subject Strand: POSITIVE Subject Start: 190 Subject End: 380 .................................................................................tgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagcttt............................................................................................................................................................ .................................................................................tgtaaaaataattccgttaaaaagtaataactgcgctttgacattgcgaaagtggctgttttgcaacgcaaaacagccgcttttatcgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatacattgatgtatagatagttatgcaatagtttcccttgtgaaaaatatttacatcttt............................................................................................................................................................ Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 1.0E-40 bit: 168.0 Len: 137 Query Start:79 Query End:215 Subject Strand: POSITIVE Subject Start: 141 Subject End: 277 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttataatg..................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-6 bit: 54.0 Len: 35 Query Start:130 Query End:164 Subject Strand: NEGATIVE Subject Start: 192 Subject End: 226 .................................................................................................................................aaagcggctgttttgcgatgcaaaagagccgcttt........................................................................................................................................................................................................................................................................ .................................................................................................................................aaagcggctgttttgcattgcaaaagagccgcttt........................................................................................................................................................................................................................................................................ Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 1.0E-40 bit: 168.0 Len: 137 Query Start:79 Query End:215 Subject Strand: POSITIVE Subject Start: 191 Subject End: 327 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataatttcgttaaaaagtgataactgcactttgacgttgcgaaagcggctgttttacgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttaggacgcaaaacaatagattttgtaatg..................................................................................................................................................................................................................... Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 4.0E-40 bit: 167.0 Len: 216 Query Start:80 Query End:295 Subject Strand: POSITIVE Subject Start: 480 Subject End: 695 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcataaa..................................................................................................................................... ...............................................................................tttgtaaagataattctgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccatgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgatacataataagttatataacagttatacttgcgaaaaatatttacatatttattatcttcttttcactcataaa..................................................................................................................................... Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 2.0E-39 bit: 165.0 Len: 135 Query Start:79 Query End:213 Subject Strand: NEGATIVE Subject Start: 53 Subject End: 187 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattccgacgaaaaacggtaatttcgatttggcgttgcgaaagcggctgttttgcagcgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-6 bit: 54.0 Len: 35 Query Start:130 Query End:164 Subject Strand: POSITIVE Subject Start: 102 Subject End: 136 .................................................................................................................................aaagcggctgttttgcgatgcaaaagagccgcttt........................................................................................................................................................................................................................................................................ .................................................................................................................................aaagcggctgttttgcgctgcaaaacagccgcttt........................................................................................................................................................................................................................................................................ Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 1.0E-37 bit: 159.0 Len: 144 Query Start:80 Query End:223 Subject Strand: NEGATIVE Subject Start: 373 Subject End: 516 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ...............................................................................tttgtaaagataattctgatgaaaaatgataatttcgatttggcattgcgaaagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcgttgata............................................................................................................................................................................................................. Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406 HSP 1 e-value: 4.0E-37 bit: 157.0 Len: 123 Query Start:79 Query End:201 Subject Strand: NEGATIVE Subject Start: 199 Subject End: 321 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaa................................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattcccttaaaaaaggataactgcgctttggcattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaa................................................................................................................................................................................................................................... Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 6.0E-36 bit: 153.0 Len: 145 Query Start:79 Query End:223 Subject Strand: POSITIVE Subject Start: 113 Subject End: 257 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ..............................................................................ttttgtaaagataatttctttgaaaaatggtaatttcgatttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgttgata............................................................................................................................................................................................................. Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479 HSP 1 e-value: 6.0E-36 bit: 153.0 Len: 129 Query Start:81 Query End:209 Subject Strand: POSITIVE Subject Start: 113 Subject End: 241 ................................................................................ttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... ................................................................................ttgtaaaaataattccgttaaaaagtgataactgccttttgacattgcaaaagcagctgttttacgatgcaaaacaaccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 32 Query Start:249 Query End:280 Subject Strand: POSITIVE Subject Start: 281 Subject End: 312 ........................................................................................................................................................................................................................................................cttgtgaaaaatatttacagctttatagtctt.................................................................................................................................................... ........................................................................................................................................................................................................................................................cttgtgaaaaatatttacagctttattgtctt.................................................................................................................................................... Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 6.0E-36 bit: 153.0 Len: 193 Query Start:100 Query End:292 Subject Strand: POSITIVE Subject Start: 762 Subject End: 954 ...................................................................................................gaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagctttatagtcttcttttcgttcat........................................................................................................................................ ...................................................................................................gaaaaatgataatttcgatttggcgttgcgaaagcgtaggttttgcaacgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttataatatgttgataaacagaaagttatgcgatagttgcatctgtgaaaaatatttacagttttatggtctacttttccttcat........................................................................................................................................ Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 2.0E-35 bit: 151.0 Len: 144 Query Start:80 Query End:223 Subject Strand: POSITIVE Subject Start: 310 Subject End: 453 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ...............................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcgttgata............................................................................................................................................................................................................. Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415 HSP 1 e-value: 2.0E-35 bit: 151.0 Len: 144 Query Start:66 Query End:209 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 322 .................................................................aaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... .................................................................aaaatcgctatggttttgtaaagataattttattaaaaagtggcaattgcgttttgacattgcaaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcgaaacaataggtttt........................................................................................................................................................................................................................... Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 4.0E-34 bit: 147.0 Len: 130 Query Start:80 Query End:209 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 308 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... ...............................................................................tttgtaaagataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggtttt........................................................................................................................................................................................................................... Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 4.0E-34 bit: 147.0 Len: 142 Query Start:73 Query End:214 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 368 ........................................................................ctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... ........................................................................ctttggttttgtaaagataatt-cattgaaaaacgataatttcgatttggcattgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacacttttggaatgcaaaacaataggttttataat...................................................................................................................................................................................................................... Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 4.0E-34 bit: 147.0 Len: 158 Query Start:79 Query End:236 Subject Strand: POSITIVE Subject Start: 215 Subject End: 372 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttat................................................................................................................................................................................................ ..............................................................................ttttgtaaagataatttcgctgaaaaacgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttacaatacgttgatatacagattgttat................................................................................................................................................................................................ Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 1.0E-33 bit: 145.0 Len: 165 Query Start:109 Query End:273 Subject Strand: POSITIVE Subject Start: 171 Subject End: 335 ............................................................................................................taattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagcttta........................................................................................................................................................... ............................................................................................................taatttcgatttggcattgcgaaagcggctgttttgcatcgcaaaacagccgctttgaccgtgtaaaacctacgcttttacaatgcaaaacaataggttttgcattgcgttgataatgagaatgttatacaataggtattcttgtgaaaaatatttacatcttta........................................................................................................................................................... HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 35 Query Start:130 Query End:164 Subject Strand: NEGATIVE Subject Start: 192 Subject End: 226 .................................................................................................................................aaagcggctgttttgcgatgcaaaagagccgcttt........................................................................................................................................................................................................................................................................ .................................................................................................................................aaagcggctgttttgcgatgcaaaacagccgcttt........................................................................................................................................................................................................................................................................ Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 6.0E-33 bit: 143.0 Len: 136 Query Start:79 Query End:214 Subject Strand: POSITIVE Subject Start: 50 Subject End: 185 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattccgttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 2.0E-32 bit: 141.0 Len: 135 Query Start:81 Query End:215 Subject Strand: POSITIVE Subject Start: 170 Subject End: 304 ................................................................................ttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... ................................................................................ttgtaaagataattccgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcattgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 9.0E-32 bit: 139.0 Len: 134 Query Start:80 Query End:213 Subject Strand: POSITIVE Subject Start: 149 Subject End: 282 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... ...............................................................................tttgtaaagataattccgttaaaaagtgataaccgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 4.0E-31 bit: 137.0 Len: 165 Query Start:59 Query End:223 Subject Strand: NEGATIVE Subject Start: 138 Subject End: 302 ..........................................................ttgccgaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ..........................................................ttgctgaaaaatagttctgtttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgtaaaacaataggttttgtaaggcgttgata............................................................................................................................................................................................................. Subject: pint_PI1688_PI1689|possible GTPase:conserved hypothetical protein|POSITIVE:POSITIVE|[1603964,1604449]|486 HSP 1 e-value: 4.0E-31 bit: 137.0 Len: 137 Query Start:73 Query End:209 Subject Strand: NEGATIVE Subject Start: 174 Subject End: 310 ........................................................................ctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... ........................................................................ctttgattttgtaaagataattcggagggaaaatgataatttcgatttgacgttgcgaaagcgtatgttttgcgatgcaaaagagccgcttttaccgtgcaaaacctacgcttttacaatgcaaaacaataggtttt........................................................................................................................................................................................................................... Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 1.0E-30 bit: 135.0 Len: 144 Query Start:79 Query End:222 Subject Strand: POSITIVE Subject Start: 111 Subject End: 254 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgat.............................................................................................................................................................................................................. ..............................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgat.............................................................................................................................................................................................................. Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 2.0E-29 bit: 131.0 Len: 130 Query Start:80 Query End:209 Subject Strand: POSITIVE Subject Start: 200 Subject End: 329 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... ...............................................................................tttgtaaagataattccgttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgtttttggaacgcaaaacaataggtttt........................................................................................................................................................................................................................... Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 9.0E-29 bit: 129.0 Len: 137 Query Start:79 Query End:215 Subject Strand: NEGATIVE Subject Start: 91 Subject End: 227 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcattgcgaaagcggctcttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgcaatg..................................................................................................................................................................................................................... Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270 HSP 1 e-value: 9.0E-29 bit: 129.0 Len: 133 Query Start:78 Query End:210 Subject Strand: NEGATIVE Subject Start: 87 Subject End: 219 .............................................................................cttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... .............................................................................cttttgtaaagattatttctttagaaaatggtaatttcgatttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 5.0E-27 bit: 123.0 Len: 150 Query Start:64 Query End:213 Subject Strand: NEGATIVE Subject Start: 407 Subject End: 556 ...............................................................gaaaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... ...............................................................gaaaaatagtcttggttttgtaaagataattacattgaaaattgataatttcgttttgacgttgcgaaagcggctgttttgcgaggtaaaacctacgcttttgccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 5.0E-27 bit: 123.0 Len: 134 Query Start:80 Query End:213 Subject Strand: POSITIVE Subject Start: 60 Subject End: 193 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... ...............................................................................tttgtaaagataattctgttaaaaagtgacaactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttagaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 5.0E-27 bit: 123.0 Len: 138 Query Start:73 Query End:210 Subject Strand: POSITIVE Subject Start: 85 Subject End: 222 ........................................................................ctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... ........................................................................ctttgcttttgtaaagataatttctttaaaaagtaataatttcgatttgacattgcgaaaacggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggagtgcaaaacaataggttttg.......................................................................................................................................................................................................................... Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409 HSP 1 e-value: 2.0E-26 bit: 121.0 Len: 141 Query Start:83 Query End:223 Subject Strand: POSITIVE Subject Start: 105 Subject End: 245 ..................................................................................gtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ..................................................................................gtaaagatattttccttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaatgcgttgata............................................................................................................................................................................................................. Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 2.0E-26 bit: 121.0 Len: 137 Query Start:79 Query End:215 Subject Strand: POSITIVE Subject Start: 166 Subject End: 302 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 8.0E-26 bit: 119.0 Len: 136 Query Start:79 Query End:214 Subject Strand: POSITIVE Subject Start: 146 Subject End: 281 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 8.0E-26 bit: 119.0 Len: 132 Query Start:79 Query End:210 Subject Strand: NEGATIVE Subject Start: 304 Subject End: 435 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttgacgttgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 8.0E-26 bit: 119.0 Len: 132 Query Start:79 Query End:210 Subject Strand: POSITIVE Subject Start: 114 Subject End: 245 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... ..............................................................................ttttgtaaagattattctgttaaaaagcgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttagcgtgcaaaacagccgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 1.0E-24 bit: 115.0 Len: 134 Query Start:80 Query End:213 Subject Strand: NEGATIVE Subject Start: 251 Subject End: 384 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... ...............................................................................tttgtaaagataattctcttaaaaagtgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccacttttggaacgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... Subject: pint_PI1408_PI1409|glucose-1-phosphate thymidylyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1329822,1330988]|1167 HSP 1 e-value: 5.0E-24 bit: 113.0 Len: 137 Query Start:79 Query End:215 Subject Strand: NEGATIVE Subject Start: 691 Subject End: 827 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatg..................................................................................................................................................................................................................... ..............................................................................ttttgtaaaaataattctgttaaaaagtgataactgtactttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatacaaaacaataggttttgtaatg..................................................................................................................................................................................................................... Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 2.0E-23 bit: 111.0 Len: 136 Query Start:79 Query End:214 Subject Strand: NEGATIVE Subject Start: 90 Subject End: 225 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttgacgttgcgaaagcggctcttttacgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386 HSP 1 e-value: 8.0E-23 bit: 109.0 Len: 135 Query Start:80 Query End:214 Subject Strand: POSITIVE Subject Start: 215 Subject End: 349 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... ...............................................................................tttgtaaagattattctcttaaaaagtgataactgcgttttgacgatgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaat...................................................................................................................................................................................................................... Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 8.0E-23 bit: 109.0 Len: 131 Query Start:79 Query End:209 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 241 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... ..............................................................................ttttgtaaaaataattccgttaaaaagcgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 3.0E-22 bit: 107.0 Len: 150 Query Start:73 Query End:222 Subject Strand: POSITIVE Subject Start: 179 Subject End: 328 ........................................................................ctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgat.............................................................................................................................................................................................................. ........................................................................ctttgtttttgtaaagataattctcttaaaaattgataactgcgctttggcgttgcgaaagcggctcttttgtgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcgaaacaataggttttgtaaggcgttgat.............................................................................................................................................................................................................. Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 1.0E-21 bit: 105.0 Len: 145 Query Start:79 Query End:223 Subject Strand: POSITIVE Subject Start: 10 Subject End: 154 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ..............................................................................ttttgtaaagataattccgaagaaaaatgataatttcgatttgacgttgcgaaagtggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcaaaacaataggttttgtaatgcgttgata............................................................................................................................................................................................................. Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 5.0E-21 bit: 103.0 Len: 132 Query Start:79 Query End:210 Subject Strand: NEGATIVE Subject Start: 97 Subject End: 228 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttg.......................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataattctgttaaaaactgataactgcgttttgacattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttg.......................................................................................................................................................................................................................... Subject: pint_PI0694_PI0695|Na+/dicarboxylate or sulfate symporter:xanthine/uracil permease family protein|POSITIVE:POSITIVE|[631238,631552]|315 HSP 1 e-value: 3.0E-19 bit: 97.6 Len: 145 Query Start:79 Query End:223 Subject Strand: POSITIVE Subject Start: 88 Subject End: 232 ..............................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ..............................................................................ttttgtaaagataattccgacggaaaacggtaatttcgatttgacactgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgcaaagtgttgata............................................................................................................................................................................................................. Subject: pint_PI1370_PI1371|alkyl hydroperoxide reductase, subunit F:hypothetical protein|POSITIVE:POSITIVE|[1292237,1292498]|262 HSP 1 e-value: 1.0E-18 bit: 95.6 Len: 100 Query Start:81 Query End:180 Subject Strand: POSITIVE Subject Start: 163 Subject End: 262 ................................................................................ttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaaccta........................................................................................................................................................................................................................................................ ................................................................................ttgtaaagataattctcttaaaaagtgataactgcgctttggcattgcaaaagcggctattttgcatcgcaaaacagccgcttttactgtgtaaaaccta........................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-9 bit: 63.9 Len: 36 Query Start:130 Query End:165 Subject Strand: NEGATIVE Subject Start: 211 Subject End: 246 .................................................................................................................................aaagcggctgttttgcgatgcaaaagagccgctttt....................................................................................................................................................................................................................................................................... .................................................................................................................................aaagcggctgttttgcgatgcaaaatagccgctttt....................................................................................................................................................................................................................................................................... Subject: pint_PI1937_PI1938|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1891147,1891993]|847 HSP 1 e-value: 2.0E-17 bit: 91.7 Len: 130 Query Start:84 Query End:213 Subject Strand: POSITIVE Subject Start: 507 Subject End: 636 ...................................................................................taaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... ...................................................................................taaagataattctgttaaaaagcgataactgcgctttggcgttgcgaaagcgtaacttttgcacgccaaaagagccgcttttaccttgcaaaacctacgcttttagaacgtaaaacaataggctttgtaa....................................................................................................................................................................................................................... Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 3.0E-16 bit: 87.7 Len: 148 Query Start:66 Query End:213 Subject Strand: NEGATIVE Subject Start: 37 Subject End: 184 .................................................................aaaatagctttgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... .................................................................aaaatatctttggttttgtaaagataattctgatgaaaaacaataatttcgttttgacgttgcgaaagcggctcttttacaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... Subject: pint_PI1803_PI1804|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1737852,1738248]|397 HSP 1 e-value: 1.0E-15 bit: 85.7 Len: 103 Query Start:107 Query End:209 Subject Strand: POSITIVE Subject Start: 294 Subject End: 396 ..........................................................................................................ggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... ..........................................................................................................ggtaatttcgatttggcattgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttacaatgcaaaacaataggtttt........................................................................................................................................................................................................................... Subject: pint_PI1117_PI1118|glycosyl transferase, family 2:glycosyl transferases, group 1|POSITIVE:POSITIVE|[1042340,1042635]|296 HSP 1 e-value: 1.0E-15 bit: 85.7 Len: 107 Query Start:117 Query End:223 Subject Strand: NEGATIVE Subject Start: 75 Subject End: 181 ....................................................................................................................ctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ....................................................................................................................ctttgacattccaaaagcggttgttttgcgatgcaaaacctacgcttttaccgtgtaaaacagccgcttttggaacgcgaaacaataggttttacaatgtcttgata............................................................................................................................................................................................................. Subject: pint_PI1324_PI1325|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1243086,1243554]|469 HSP 1 e-value: 2.0E-14 bit: 81.8 Len: 189 Query Start:81 Query End:269 Subject Strand: NEGATIVE Subject Start: 202 Subject End: 390 ................................................................................ttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgatacacagattgttatttaatagtggtgcttgtgaaaaatatttacagc............................................................................................................................................................... ................................................................................ttgtaaaaataattctgttaaaaagtgataactgcactttggcattgtaaaagcggctgttttgcatcgcaaaacagccgcttttggctggtaaaagagccgcttttacaatgtaaaacaataggttttgtaattcgttgataattagtttgttaggcaacagttatgtttgtgaaaaatatttacagc............................................................................................................................................................... HSP 2 e-value: 3.0E-10 bit: 67.9 Len: 38 Query Start:130 Query End:167 Subject Strand: POSITIVE Subject Start: 307 Subject End: 344 .................................................................................................................................aaagcggctgttttgcgatgcaaaagagccgcttttac..................................................................................................................................................................................................................................................................... .................................................................................................................................aaagcggctgttttgcgatgcaaaacagccgcttttac..................................................................................................................................................................................................................................................................... Subject: pint_PI1915_PI1916|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1859967,1860350]|384 HSP 1 e-value: 3.0E-13 bit: 77.8 Len: 115 Query Start:109 Query End:223 Subject Strand: POSITIVE Subject Start: 144 Subject End: 258 ............................................................................................................taattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatgtgttgata............................................................................................................................................................................................................. ............................................................................................................taatttcgatttggcattgcgaaagcggctgttttgcacggtaaaagcgtatgttttacgttgcaaaacagccgcttttggaatgcaaaacaataggttttataatgtattgata............................................................................................................................................................................................................. Subject: pint_PI1271_PI1272|transcriptional regulator, AraC/XylS family:possible transcriptional regulator|POSITIVE:POSITIVE|[1191345,1191841]|497 HSP 1 e-value: 3.0E-13 bit: 77.8 Len: 119 Query Start:80 Query End:198 Subject Strand: POSITIVE Subject Start: 257 Subject End: 375 ...............................................................................tttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaa...................................................................................................................................................................................................................................... ...............................................................................tttgtaaatataattccgttaaaaagtgataactgcgctttaacgttgcgaaagcggttcttttgcgatgcaaaacctacgcttttaccgtacaaaacagccgcttttggaacgcaaaa...................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-11 bit: 69.9 Len: 47 Query Start:250 Query End:296 Subject Strand: POSITIVE Subject Start: 427 Subject End: 473 .........................................................................................................................................................................................................................................................ttgtgaaaaatatttacagctttatagtcttcttttcgttcataaag.................................................................................................................................... .........................................................................................................................................................................................................................................................ttgtgaaaaatatttacagcttgattatcttcttttcgttcataaag.................................................................................................................................... Subject: pint_PI1728_PI1729|ATP-dependent Clp protease, proteolytic subunit:FKBP-type peptidyl-prolyl cis-trans isomerase, trigger factor|POSITIVE:POSITIVE|[1647719,1648555]|837 HSP 1 e-value: 2.0E-11 bit: 71.9 Len: 131 Query Start:79 Query End:209 Subject Strand: NEGATIVE Subject Start: 416 Subject End: 546 ..............................................................................ttttgtaaagataatttcgttga-aaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt........................................................................................................................................................................................................................... ..............................................................................ttttgtaaagataatt-cgttgagaaaacggtaatttcgatttgacgttgcaaaagcgtaggttttgcaaggcaaaagagccgcttttaccgtgcaaaagcggctcttttacaatgcgaaacaataggtttt........................................................................................................................................................................................................................... Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 1.0E-9 bit: 65.9 Len: 148 Query Start:66 Query End:213 Subject Strand: NEGATIVE Subject Start: 328 Subject End: 475 .................................................................aaaatagctttgcttttgtaaagataatttcgttga-aaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... .................................................................aaaatcgctttggttttgtaaagataatt-cgttaagaaaacgataatttcgatttgacgttgcgaaagcagctcttttgcaacgcaaaacctatgcttttaccgtgcaaaacagccgcttttaggatgcaaaacaataggttttgtaa....................................................................................................................................................................................................................... Subject: pint_PI1588_PI1589|DNA polymerase III, epsilon chain:conserved hypothetical protein|POSITIVE:POSITIVE|[1516991,1517497]|507 HSP 1 e-value: 1.0E-9 bit: 65.9 Len: 57 Query Start:130 Query End:186 Subject Strand: NEGATIVE Subject Start: 277 Subject End: 333 .................................................................................................................................aaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttt.................................................................................................................................................................................................................................................. .................................................................................................................................aaagcggctgttttgcaaggtaaaagagccgcttttggcgtgcaaaacctacgcttt.................................................................................................................................................................................................................................................. HSP 2 e-value: 7.0E-8 bit: 60.0 Len: 126 Query Start:76 Query End:201 Subject Strand: POSITIVE Subject Start: 223 Subject End: 348 ...........................................................................tgcttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaa................................................................................................................................................................................................................................... ...........................................................................tgcttttgtaaaaataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcacgccaaaagcggctcttttaccttgcaaaacagccgcttttggaacgcaaaacaa................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGAAGGAGAAGUUGAUAUUUUCGGUGGAUUGAUUUUCUUUAUUUUGCCUCAGAAUUUUGCCGAAAAAUAGCUUUGCUUUUGUAAAGAUAAUUUCGUUGAAAAGUGGUAAUUGCGCUUUGGCAUUGCGAAAGCGGCUGUUUUGCGAUGCAAAAGAGCCGCUUUUACCGUGUAAAACCUACGCUUUUGGAAUGCAAAACAAUAGGUUUUGUAAUGUGUUGAUACACAGAUUGUUAUUUAAUAGUGGUGCUUGUGAAAAAUAUUUACAGCUUUAUAGUCUUCUUUUCGUUCAUAAAGUAGGUUGUUUCCAUUGAGUUUUACUGGUCUGUAAGAAGCUGAAAUGAGAAAGCUGAAAAUAAAAAAGAGUAGAAAGACUGUCCGUUUUACGGUUUUCUUUCUACUCUCUUUAUUUAUUGUGCGAAUGCUUUA ...(((.((((((..(((......((..((.(((......))).))..))............(((((.....((((((....))))))....)))))....(((((.((((...(((...(((((..(((((((((((.((((((...)))))).))))))))))......(((((((((...(((((.....)))))...)))))))))...(((((....)))))...............)..))))).)))........)))).)))))...)))..)))))).))).(((((((..(((((((((((.((((((((......))..))))))..)))).)))......(((((((..((((((((((((....(((.....)))...)))))))))))).))))))).....)))).))))))) (-118.20) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAAGCAUUCGCACAAUAAAUAAAGAGAGUAGAAAGAAAACCGUAAAACGGACAGUCUUUCUACUCUUUUUUAUUUUCAGCUUUCUCAUUUCAGCUUCUUACAGACCAGUAAAACUCAAUGGAAACAACCUACUUUAUGAACGAAAAGAAGACUAUAAAGCUGUAAAUAUUUUUCACAAGCACCACUAUUAAAUAACAAUCUGUGUAUCAACACAUUACAAAACCUAUUGUUUUGCAUUCCAAAAGCGUAGGUUUUACACGGUAAAAGCGGCUCUUUUGCAUCGCAAAACAGCCGCUUUCGCAAUGCCAAAGCGCAAUUACCACUUUUCAACGAAAUUAUCUUUACAAAAGCAAAGCUAUUUUUCGGCAAAAUUCUGAGGCAAAAUAAAGAAAAUCAAUCCACCGAAAAUAUCAACUUCUCCUUCUUA .......((((..........((((((((((((((((...(((.....)))....))))))))))))))))(((((.(((((((..........((((((........(((((......((....))......))))).......)))))).....))))))).))))).(((((....((.((.................(((((....)))))....(((((((((.(((((........))))))))))))))....))..(((((((((.((((((...)))))).))))))))).))..((((.......................(((((.((.((((.(....).)))).))..))))).((......)).)))).......))))).........))))..................... (-93.12) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 912 190 141 52 3 pint:PI0182|5end_hypothetical_protein_174093..174323_POSITIVE 887 160 111 176 127 pint:PI2111|5end_conserved_hypothetical_protein_2062771..2063001_POSITIVE 887 150 101 177 128 pint:PI0159|5end_hypothetical_protein_151273..151503_POSITIVE 887 150 101 89 40 pint:PI0157|5end_hypothetical_protein_151185..151415_POSITIVE 887 150 101 89 40 pint:PI0055|5end_hypothetical_protein_54815..55045_POSITIVE 862 200 151 62 13 pint:PI0200|5end_hypothetical_protein_191545..191775_POSITIVE 838 170 121 60 11 pint:PI1934|5end_hypothetical_protein_1882363..1882593_POSITIVE 838 170 121 68 19 pint:PI1168|5end_hypothetical_protein_1089696..1089926_POSITIVE 838 170 121 60 11 pint:PI1167|5end_hypothetical_protein_1089688..1089918_POSITIVE 838 190 141 107 58 pint:PI0851|5end_hypothetical_protein_784310..784540_POSITIVE 838 190 141 107 58 pint:PI0841|5end_hypothetical_protein_775406..775636_POSITIVE 836 187 141 49 3 pint:PI1733|5end_hypothetical_protein_1652160..1652390_POSITIVE 830 150 101 166 117 pint:PI0788|5end_3-methyladenine_DNA_glycosylase_(DNA-3-methyladenine_glycosylase_I)_726152..726382_POSITIVE 829 150 101 230 181 pint:PI0007|5end_hypothetical_protein_6417..6647_POSITIVE 814 170 121 60 11 pint:PI2153|5end_hypothetical_protein_2099392..2099622_POSITIVE 812 187 141 85 39 pint:PI2128|5end_hypothetical_protein_2076512..2076742_POSITIVE 812 160 111 230 181 pint:PI0202|5end_DNA_helicase_191753..191983_POSITIVE 804 150 101 201 152 pint:PI2003|5end_hypothetical_protein_1960823..1961053_POSITIVE 800 170 121 214 165 pint:PI0842|5end_5-formyltetrahydrofolate_cyclo-ligase_775533..775763_POSITIVE 797 140 94 231 184 pint:PI0056|5end_conserved_hypothetical_protein;_possible_DNA_uptake_protein_54967..55197_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1010 170 121 136 87 pint:PI0182|3end_hypothetical_protein_174277..174427_POSITIVE 887 150 101 122 73 pint:PI0158|3end_hypothetical_protein_151298..151448_POSITIVE 838 170 121 142 93 pint:PI1340|3end_hypothetical_protein_1256872..1257022_POSITIVE 829 150 101 122 73 pint:PI0004|3end_hypothetical_protein_6389..6539_POSITIVE 826 150 101 126 77 pint:PI1922|3end_hypothetical_protein_1865454..1865604_POSITIVE 812 170 121 142 93 pint:PI2011|3end_hypothetical_protein_1970730..1970880_POSITIVE 812 160 111 132 83 pint:PI0200|3end_hypothetical_protein_191735..191885_POSITIVE 810 150 101 122 73 pint:PI0061|3end_hypothetical_protein_60690..60840_POSITIVE 790 170 121 142 93 pint:PI2131|3end_hypothetical_protein_2080868..2081018_POSITIVE 782 150 101 82 33 pint:PI0759|3end_hypothetical_protein_693998..694148_POSITIVE 752 150 101 136 87 pint:PI1528|3end_hypothetical_protein_1449878..1450028_POSITIVE 742 170 121 142 93 pint:PI1814|3end_hypothetical_protein_1753233..1753383_POSITIVE 738 179 131 151 103 pint:PI0551|3end_hypothetical_protein_502683..502833_POSITIVE 729 150 101 143 94 pint:PI1905|3end_hypothetical_protein_1847854..1848004_POSITIVE 715 130 81 142 93 pint:PI0841|3end_hypothetical_protein_775581..775731_POSITIVE 694 150 101 132 83 pint:PI1601|3end_hypothetical_protein_1530454..1530604_POSITIVE 689 210 161 142 93 pint:PI1141|3end_hypothetical_protein_1069713..1069863_POSITIVE 689 210 161 55 6 pint:PI0688|3end_hypothetical_protein_625750..625900_POSITIVE 689 210 161 55 6 pint:PI0186|3end_hypothetical_protein_178003..178153_POSITIVE 689 210 161 83 34 pint:PI0054|3end_hypothetical_protein_54829..54979_POSITIVE