Origin IGS:
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
tgatttatcacgtttctgacacccaagaaatagcaatgttggcatgagaaacgtgctcaatcacgcccttgcaatgtaacagcgatttgacataaaatcgctatggttttgtaaagataattttattaaaaagtggcaattgcgttttgacattgcaaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcgaaacaataggttttacaatgccttgattatgaagtggttaaacaacaactatgcttatgaaaaatatttacagcattttcattttatttccgccccctgaatatgctgaaactacccaataaaaaaagcacgacaaatacgaaatgtacttgccgtgcccttatttatattatgtgtaatatagtttcttta

Mask Tandem Repeat Region ================================================
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca

Find is-nt database================================================
Query_seq: PI0932:PI0933|PI0932:PI0933:conserved hypothetical protein; possible hemin receptor:hypothetical protein:->->:865425..865839 415
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: PI0932:PI0933|PI0932:PI0933:conserved hypothetical protein; possible hemin receptor:hypothetical protein:->->:865425..865839 415
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: PI0932:PI0933|PI0932:PI0933:conserved hypothetical protein; possible hemin receptor:hypothetical protein:->->:865425..865839 415
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
Predict ORF larger than 30AA ================================================
Protein_Len: 33	Strand: +	Start: 214	End: 312
..................................................................................................................................................................................................................... M  H  G  K  S  G  S  F  A  L  Q  N  L  R  F  C  N  V  K  T  Q  L  P  L  F  N  K  I  I  F  T  K  P .......................................................................................................
Protein_Len: 39	Strand: +	Start: 236	End: 352
........................................................................................................................................................................................................................................... M  H  C  K  T  Y  A  F  A  M  S  K  R  N  C  H  F  L  I  K  L  S  L  Q  N  H  S  D  F  M  S  N  R  C  Y  I  A  R  A ...............................................................
Protein_Len: 60	Strand: -	Start: 96	End: 299
............................................................................................... Q  L  Y  K  E  Y  A  Y  N  N  N  L  W  K  M  I  L  A  N  Y  F  R  N  N  R  T  G  F  A  Y  T  K  C  P  L  L  P  E  K  A  N  C  F  R  R  K  Q  L  T  L  V  C  N  G  S  K  L  L  I  M ....................................................................................................................
Protein_Len: 43	Strand: -	Start: 1	End: 129
 L  S  V  I  N  C  M  I  Y  I  L  A  R  C  T  C  K  T  N  T  T  S  K  K  N  P  L  K  L  M  N  L  P  R  F  Y  F  S  F  A  T  F  M ..............................................................................................................................................................................................................................................................................................

taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================
PromScan Matrix: RpoD-17	Strand: -	Score: 81	Start: 174	End: 203
.............................................................................................................................................................................TTTGGAACGCGAAACAATAGGTTTTACAAT....................................................................................................................................................................................................................

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
Predict TransTerm conf > 70================================================
TransTerm Strand: +	Conf: 100	HP_score: -12.7	Tail_Score: -5.8187	Start: 35	End: 65	Full_Region: ATAATATAAATAAGG GCACGGCAAGTAC ATTTC GTATTTGTCGTGC TTTTTTTATTGGGTA
..................................GCACGGCAAGTACATTTCGTATTTGTCGTGC..............................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 100	HP_score: -19.3	Tail_Score: -4.16943	Start: 205	End: 255	Full_Region: TTTCGCGTTCCAAAA GCGTAGGTTTTGCACGGTAAAAG CGGCT CTTTTGCATTGCAAAACCTACGC TTTTGCAATGTCAAA
............................................................................................................................................................................................................GCGTAGGTTTTGCACGGTAAAAGCGGCTCTTTTGCATTGCAAAACCTACGC................................................................................................................................................................
TransTerm Strand: -	Conf: 100	HP_score: -17.1	Tail_Score: -4.07568	Start: 205	End: 255	Full_Region: tttgacattgcaaaa gcgtaggttttgcaatgcaaaag agccg cttttaccgtgcaaaacctacgc ttttggaacgcgaaa
............................................................................................................................................................................................................gcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgc................................................................................................................................................................
TransTerm Strand: +	Conf: 58	HP_score: -6.1	Tail_Score: -3.17075	Start: 313	End: 336	Full_Region: ATCTTTACAAAACCA TAGCGATTT TATGTC AAATCGCTG TTACATTGCAAGGGC
........................................................................................................................................................................................................................................................................................................................TAGCGATTTTATGTCAAATCGCTG...............................................................................
TransTerm Strand: -	Conf: 48	HP_score: -3.9	Tail_Score: -3.17598	Start: 313	End: 336	Full_Region: gcccttgcaatgtaa cagcgattt gacata aaatcgcta tggttttgtaaagat
........................................................................................................................................................................................................................................................................................................................cagcgatttgacataaaatcgcta...............................................................................

Find igs database================================================
Query_seq: PI0932:PI0933|PI0932:PI0933:conserved hypothetical protein; possible hemin receptor:hypothetical protein:->->:865425..865839 415
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
Intra-Species Hit: Count: 46	Min: 1	Max: 415	Len: 415
Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415
HSP  1	e-value: 0.0	bit: 781.0	Len: 415	Query Start:1	Query End:415	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 415
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgcnnnnnnnattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca
taaagaaactatattacacataatataaataagggcacggcaagtacatttcgtatttgtcgtgctttttttattgggtagtttcagcatattcagggggcggaaataaaatgaaaatgctgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgattttatgtcaaatcgctgttacattgcaagggcgtgattgagcacgtttctcatgccaacattgctatttcttgggtgtcagaaacgtgataaatca

Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465
HSP  1	e-value: 1.0E-46	bit: 188.0	Len: 143	Query Start:166	Query End:308	Subject Strand: POSITIVE	Subject Start: 166	Subject End: 308
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
.....................................................................................................................................................................atcaacgctttgtaaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaacgtcaaagcgcagttgtcactttttaacggaattatctttacaaa...........................................................................................................

Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426
HSP  1	e-value: 1.0E-40	bit: 168.0	Len: 141	Query Start:169	Query End:309	Subject Strand: NEGATIVE	Subject Start: 141	Subject End: 281
........................................................................................................................................................................aaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
........................................................................................................................................................................aaggcattataaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaagagaattatctttacaaaa..........................................................................................................

Subject: pint_PI1909_PI1910|DNA gyrase, B subunit:hypothetical protein|POSITIVE:POSITIVE|[1855331,1855917]|587
HSP  1	e-value: 4.0E-40	bit: 167.0	Len: 144	Query Start:166	Query End:309	Subject Strand: POSITIVE	Subject Start: 334	Subject End: 477
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
.....................................................................................................................................................................atcaacgcattgcaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagtggcgcttttgcatcgcaaaacctacgctttcgcaatgtcaaagcgcagttatcactttttaacaatgttatctttacaaaa..........................................................................................................

Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575
HSP  1	e-value: 6.0E-36	bit: 153.0	Len: 145	Query Start:166	Query End:310	Subject Strand: NEGATIVE	Subject Start: 143	Subject End: 287
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
.....................................................................................................................................................................atcaagactttgcaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctcttttgcaacgcaaaacctacgctttcgcaatgtcaaatcgaaattatcattttttcaacgaattatctttacaaaac.........................................................................................................

Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428
HSP  1	e-value: 2.0E-35	bit: 151.0	Len: 144	Query Start:179	Query End:322	Subject Strand: NEGATIVE	Subject Start: 66	Subject End: 209
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccatagcgatttt.............................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcatcgcaaaacagccgctttcgcaatgccaaagcgcaattaccacttttcaacgaaattatctttacaaaagcaaagctatttt.............................................................................................

Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693
HSP  1	e-value: 2.0E-32	bit: 141.0	Len: 135	Query Start:178	Query End:312	Subject Strand: POSITIVE	Subject Start: 232	Subject End: 365
.................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaacca.......................................................................................................
.................................................................................................................................................................................taaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaat-gaattatctttacaaaacca.......................................................................................................

Subject: pint_PI1958_PI1959|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1917430,1917847]|418
HSP  1	e-value: 1.0E-30	bit: 135.0	Len: 132	Query Start:178	Query End:309	Subject Strand: NEGATIVE	Subject Start: 182	Subject End: 313
.................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
.................................................................................................................................................................................taaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgcaatgcaaaacagccgcttttgcaatgtcaaaccgaaattgctgttttttatcagaattatctttacaaaa..........................................................................................................

Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348
HSP  1	e-value: 5.0E-27	bit: 123.0	Len: 134	Query Start:179	Query End:312	Subject Strand: NEGATIVE	Subject Start: 198	Subject End: 330
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaacca.......................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgc-aaacagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaacca.......................................................................................................

Subject: pint_PI1981_PI1982|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1938199,1938578]|380
HSP  1	e-value: 2.0E-26	bit: 121.0	Len: 133	Query Start:178	Query End:310	Subject Strand: NEGATIVE	Subject Start: 143	Subject End: 275
.................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
.................................................................................................................................................................................taaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgaaatgcaaaacagccgctttcgcaatgtcaaaccgaaattgctgttttttatcagaattatctttacaaaac.........................................................................................................

Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406
HSP  1	e-value: 2.0E-26	bit: 121.0	Len: 133	Query Start:178	Query End:310	Subject Strand: POSITIVE	Subject Start: 190	Subject End: 322
.................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
.................................................................................................................................................................................taaaacgtgttgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcaacgcaaaacctacgctttcgcaatgccaaagcgcagttatccttttttaagggaattatctttacaaaac.........................................................................................................

Subject: pint_PI1728_PI1729|ATP-dependent Clp protease, proteolytic subunit:FKBP-type peptidyl-prolyl cis-trans isomerase, trigger factor|POSITIVE:POSITIVE|[1647719,1648555]|837
HSP  1	e-value: 1.0E-24	bit: 115.0	Len: 150	Query Start:121	Query End:270	Subject Strand: POSITIVE	Subject Start: 358	Subject End: 507
........................................................................................................................tgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaa.................................................................................................................................................
........................................................................................................................tgtaaatattttttacaagcataactgttgtgtaaccgttttattatcagtgtgttataaaacctattgtttcgcattgtaaaagagccgcttttgcacggtaaaagcggctcttttgccttgcaaaacctacgcttttgcaacgtcaaa.................................................................................................................................................

Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729
HSP  1	e-value: 8.0E-23	bit: 109.0	Len: 131	Query Start:179	Query End:309	Subject Strand: NEGATIVE	Subject Start: 191	Subject End: 321
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
..................................................................................................................................................................................aaaatctattgttttgcgtcctaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgtaaaacagccgctttcgcaacgtcaaagtgcagttatcactttttaacgaaattatctttacaaaa..........................................................................................................

Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479
HSP  1	e-value: 3.0E-22	bit: 107.0	Len: 130	Query Start:178	Query End:307	Subject Strand: NEGATIVE	Subject Start: 113	Subject End: 242
.................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaa............................................................................................................
.................................................................................................................................................................................taaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggttgttttgcatcgtaaaacagctgcttttgcaatgtcaaaaggcagttatcactttttaacggaattatttttacaa............................................................................................................

Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247
HSP  1	e-value: 1.0E-21	bit: 105.0	Len: 137	Query Start:174	Query End:310	Subject Strand: POSITIVE	Subject Start: 93	Subject End: 229
.............................................................................................................................................................................attgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
.............................................................................................................................................................................attgcaaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgtcaaaacgcagttatcagtttttaacagaattatctttacaaaac.........................................................................................................

Subject: pint_PI0195_PI0196|epimerase/reductase:hypothetical protein|POSITIVE:POSITIVE|[188263,188574]|312
HSP  1	e-value: 1.0E-21	bit: 105.0	Len: 101	Query Start:179	Query End:279	Subject Strand: NEGATIVE	Subject Start: 175	Subject End: 275
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattg........................................................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaattg........................................................................................................................................

Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617
HSP  1	e-value: 5.0E-21	bit: 103.0	Len: 132	Query Start:179	Query End:310	Subject Strand: NEGATIVE	Subject Start: 145	Subject End: 276
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcattttttaagagaattatctttacaaaac.........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 197	Subject End: 232
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610
HSP  1	e-value: 5.0E-21	bit: 103.0	Len: 132	Query Start:179	Query End:310	Subject Strand: NEGATIVE	Subject Start: 165	Subject End: 296
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaacagccgctttcgcaatgtcaaaacgcagttatcaatttttaagagaattatctttacaaaac.........................................................................................................

Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553
HSP  1	e-value: 2.0E-20	bit: 101.0	Len: 135	Query Start:179	Query End:313	Subject Strand: POSITIVE	Subject Start: 255	Subject End: 389
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaaccat......................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcgttccaaaagtggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcactttttaagagaattatctttacaaagccat......................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: NEGATIVE	Subject Start: 299	Subject End: 334
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1117_PI1118|glycosyl transferase, family 2:glycosyl transferases, group 1|POSITIVE:POSITIVE|[1042340,1042635]|296
HSP  1	e-value: 3.0E-19	bit: 97.6	Len: 105	Query Start:166	Query End:270	Subject Strand: POSITIVE	Subject Start: 76	Subject End: 180
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaa.................................................................................................................................................
.....................................................................................................................................................................atcaagacattgtaaaacctattgtttcgcgttccaaaagcggctgttttacacggtaaaagcgtaggttttgcatcgcaaaacaaccgcttttggaatgtcaaa.................................................................................................................................................

Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438
HSP  1	e-value: 5.0E-18	bit: 93.7	Len: 131	Query Start:179	Query End:309	Subject Strand: POSITIVE	Subject Start: 305	Subject End: 435
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaacgtcaaagcgcagttatcactttttaagagaattatctttacaaaa..........................................................................................................

Subject: pint_PI1937_PI1938|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1891147,1891993]|847
HSP  1	e-value: 2.0E-17	bit: 91.7	Len: 122	Query Start:183	Query End:304	Subject Strand: NEGATIVE	Subject Start: 507	Subject End: 628
......................................................................................................................................................................................cctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatcttta...............................................................................................................
......................................................................................................................................................................................cctattgttttacgttctaaaagcgtaggttttgcaaggtaaaagcggctcttttggcgtgcaaaagttacgctttcgcaacgccaaagcgcagttatcgctttttaacagaattatcttta...............................................................................................................

Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290
HSP  1	e-value: 2.0E-17	bit: 91.7	Len: 189	Query Start:121	Query End:309	Subject Strand: NEGATIVE	Subject Start: 91	Subject End: 279
........................................................................................................................tgtaaatatttttcataagcatagttgttgtttaac-cacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
........................................................................................................................tgtaaatatttttcacaagcatagttgttgtctaactcgctatatt-tcaacgtattgcaaaacctattgttttgcactccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgttttcgcaatgtcaaatcgaaattattactttttaaagaaattatctttacaaaa..........................................................................................................

Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340
HSP  1	e-value: 2.0E-17	bit: 91.7	Len: 190	Query Start:121	Query End:310	Subject Strand: POSITIVE	Subject Start: 39	Subject End: 228
........................................................................................................................tgtaaatatttttcataagcatagttgttgtttaaccacttcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
........................................................................................................................tgtaaatatttttcgtaactataattgccgtgtaactgcttcgttatcaatgcattgcaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaatgccaaagcgcagttatcagtttttaacagaattatctttacaaaac.........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: NEGATIVE	Subject Start: 141	Subject End: 176
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgctgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481
HSP  1	e-value: 7.0E-17	bit: 89.7	Len: 145	Query Start:166	Query End:310	Subject Strand: NEGATIVE	Subject Start: 112	Subject End: 256
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
.....................................................................................................................................................................atcaacgcattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaatcgaaattaccatttttcaaagaaattatctttacaaaac.........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 164	Subject End: 199
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539
HSP  1	e-value: 3.0E-16	bit: 87.7	Len: 144	Query Start:166	Query End:309	Subject Strand: NEGATIVE	Subject Start: 111	Subject End: 254
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
.....................................................................................................................................................................atcaacgcattataaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcagtttttaacagaattatctttacaaaa..........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 162	Subject End: 197
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542
HSP  1	e-value: 3.0E-16	bit: 87.7	Len: 132	Query Start:179	Query End:310	Subject Strand: NEGATIVE	Subject Start: 49	Subject End: 180
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttatcactttttaacggaattatctttacaaaac.........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 101	Subject End: 136
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1588_PI1589|DNA polymerase III, epsilon chain:conserved hypothetical protein|POSITIVE:POSITIVE|[1516991,1517497]|507
HSP  1	e-value: 1.0E-15	bit: 85.7	Len: 123	Query Start:187	Query End:309	Subject Strand: NEGATIVE	Subject Start: 226	Subject End: 348
..........................................................................................................................................................................................ttgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
..........................................................................................................................................................................................ttgttttgcgttccaaaagcggctgttttgcaaggtaaaagagccgcttttggcgtgcaaaacctacgctttcgcaacgtcaaagcgcagttgtcactttttaacggaattatttttacaaaa..........................................................................................................
HSP  2	e-value: 4.0E-9	bit: 63.9	Len: 48	Query Start:202	Query End:249	Subject Strand: POSITIVE	Subject Start: 277	Subject End: 324
.........................................................................................................................................................................................................aaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaac......................................................................................................................................................................
.........................................................................................................................................................................................................aaagcgtaggttttgcacgccaaaagcggctcttttaccttgcaaaac......................................................................................................................................................................

Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543
HSP  1	e-value: 1.0E-15	bit: 85.7	Len: 131	Query Start:178	Query End:308	Subject Strand: NEGATIVE	Subject Start: 200	Subject End: 330
.................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
.................................................................................................................................................................................taaaacctattgttttgcgttccaaaaacggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaacggaattatctttacaaa...........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 250	Subject End: 285
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525
HSP  1	e-value: 4.0E-15	bit: 83.8	Len: 130	Query Start:179	Query End:308	Subject Strand: NEGATIVE	Subject Start: 149	Subject End: 278
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcggttatcactttttaacggaattatctttacaaa...........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 199	Subject End: 234
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374
HSP  1	e-value: 4.0E-15	bit: 83.8	Len: 130	Query Start:179	Query End:308	Subject Strand: NEGATIVE	Subject Start: 60	Subject End: 189
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattctaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttgtcactttttaacagaattatctttacaaa...........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 110	Subject End: 145
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334
HSP  1	e-value: 2.0E-14	bit: 81.8	Len: 129	Query Start:179	Query End:307	Subject Strand: NEGATIVE	Subject Start: 170	Subject End: 298
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaa............................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaatgcaaaagagccgctttcgcaatgccaaagcgcagttatcactttttaacggaattatctttacaa............................................................................................................
HSP  2	e-value: 2.0E-11	bit: 71.9	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 219	Subject End: 254
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409
HSP  1	e-value: 7.0E-14	bit: 79.8	Len: 140	Query Start:166	Query End:305	Subject Strand: NEGATIVE	Subject Start: 105	Subject End: 244
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttac..............................................................................................................
.....................................................................................................................................................................atcaacgcattgcaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaacgtcaaagcgcagttatcactttttaaggaaaatatctttac..............................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 152	Subject End: 187
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcaacgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589
HSP  1	e-value: 3.0E-13	bit: 77.8	Len: 131	Query Start:179	Query End:309	Subject Strand: POSITIVE	Subject Start: 152	Subject End: 282
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
..................................................................................................................................................................................aaaacctattgttttacgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaa..........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: NEGATIVE	Subject Start: 196	Subject End: 231
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720
HSP  1	e-value: 3.0E-13	bit: 77.8	Len: 127	Query Start:182	Query End:308	Subject Strand: NEGATIVE	Subject Start: 310	Subject End: 436
.....................................................................................................................................................................................acctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
.....................................................................................................................................................................................acctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaaagaaattatctttacaaa...........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 360	Subject End: 395
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826
HSP  1	e-value: 3.0E-13	bit: 77.8	Len: 143	Query Start:166	Query End:308	Subject Strand: NEGATIVE	Subject Start: 480	Subject End: 622
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
.....................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcatggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgccaaagcgcagttatcactttttaacagaattatctttacaaa...........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 530	Subject End: 565
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270
HSP  1	e-value: 3.0E-13	bit: 77.8	Len: 131	Query Start:179	Query End:309	Subject Strand: POSITIVE	Subject Start: 88	Subject End: 218
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaatcgaaattaccattttctaaagaaataatctttacaaaa..........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: NEGATIVE	Subject Start: 132	Subject End: 167
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386
HSP  1	e-value: 1.0E-12	bit: 75.8	Len: 130	Query Start:179	Query End:308	Subject Strand: NEGATIVE	Subject Start: 215	Subject End: 344
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcatcgtcaaaacgcagttatcactttttaagagaataatctttacaaa...........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 265	Subject End: 300
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365
HSP  1	e-value: 1.0E-12	bit: 75.8	Len: 110	Query Start:161	Query End:270	Subject Strand: NEGATIVE	Subject Start: 180	Subject End: 289
................................................................................................................................................................tcataatcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaa.................................................................................................................................................
................................................................................................................................................................tcattatcaacgcaatgcaaaacctattgttttgcattgtaaaagcgtaggttttacacggtcaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaa.................................................................................................................................................

Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387
HSP  1	e-value: 1.0E-12	bit: 75.8	Len: 138	Query Start:174	Query End:311	Subject Strand: NEGATIVE	Subject Start: 213	Subject End: 350
.............................................................................................................................................................................attgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaacc........................................................................................................
.............................................................................................................................................................................attgtaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttcagcgaaattatctttacaaaacc........................................................................................................

Subject: pint_PI1370_PI1371|alkyl hydroperoxide reductase, subunit F:hypothetical protein|POSITIVE:POSITIVE|[1292237,1292498]|262
HSP  1	e-value: 2.0E-11	bit: 71.9	Len: 100	Query Start:208	Query End:307	Subject Strand: NEGATIVE	Subject Start: 163	Subject End: 262
...............................................................................................................................................................................................................taggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaa............................................................................................................
...............................................................................................................................................................................................................taggttttacacagtaaaagcggctgttttgcgatgcaaaatagccgcttttgcaatgccaaagcgcagttatcactttttaagagaattatctttacaa............................................................................................................

Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418
HSP  1	e-value: 2.0E-11	bit: 71.9	Len: 132	Query Start:179	Query End:310	Subject Strand: NEGATIVE	Subject Start: 113	Subject End: 244
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaac.........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacgctaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcgctttttaacagaataatctttacaaaac.........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: POSITIVE	Subject Start: 165	Subject End: 200
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcgatgcaaaacctacgctttt............................................................................................................................................................

Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333
HSP  1	e-value: 7.0E-11	bit: 69.9	Len: 131	Query Start:179	Query End:309	Subject Strand: POSITIVE	Subject Start: 95	Subject End: 225
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaa..........................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcatcgtaaaagagccgctttcgcaacgtcaaagcgcagttatcagtttttaacagaattatctttacaaaa..........................................................................................................

Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719
HSP  1	e-value: 7.0E-11	bit: 69.9	Len: 143	Query Start:166	Query End:308	Subject Strand: POSITIVE	Subject Start: 374	Subject End: 516
.....................................................................................................................................................................atcaaggcattgtaaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaa...........................................................................................................
.....................................................................................................................................................................atcaacgcattacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa...........................................................................................................

Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777
HSP  1	e-value: 3.0E-10	bit: 67.9	Len: 134	Query Start:179	Query End:312	Subject Strand: POSITIVE	Subject Start: 411	Subject End: 544
..................................................................................................................................................................................aaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaacca.......................................................................................................
..................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggcaaaagcgtaggttttacctcgcaaaacagccgctttcgcaacgtcaaaacgaaattatcaattttcaatgtaattatctttacaaaacca.......................................................................................................

Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249
HSP  1	e-value: 3.0E-10	bit: 67.9	Len: 134	Query Start:178	Query End:311	Subject Strand: POSITIVE	Subject Start: 110	Subject End: 243
.................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaacc........................................................................................................
.................................................................................................................................................................................taaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaacgtcaaagcgcagttatcgctttttaacggaattatttttacaaaacc........................................................................................................
HSP  2	e-value: 1.0E-6	bit: 56.0	Len: 36	Query Start:224	Query End:259	Subject Strand: NEGATIVE	Subject Start: 155	Subject End: 190
...............................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgctttt............................................................................................................................................................
...............................................................................................................................................................................................................................aaagcggctcttttgcaacgcaaaacctacgctttt............................................................................................................................................................

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UAAAGAAACUAUAUUACACAUAAUAUAAAUAAGGGCACGGCAAGUACAUUUCGUAUUUGUCGUGCUUUUUUUAUUGGGUAGUUUCAGCAUAUUCAGGGGGCGGAAAUAAAAUGAAAAUGCUGUAAAUAUUUUUCAUAAGCAUAGUUGUUGUUUAACCACUUCAUAAUCAAGGCAUUGUAAAACCUAUUGUUUCGCGUUCCAAAAGCGUAGGUUUUGCACGGUAAAAGCGGCUCUUUUGCAUUGCAAAACCUACGCUUUUGCAAUGUCAAAACGCAAUUGCCACUUUUUAAUAAAAUUAUCUUUACAAAACCAUAGCGAUUUUAUGUCAAAUCGCUGUUACAUUGCAAGGGCGUGAUUGAGCACGUUUCUCAUGCCAACAUUGCUAUUUCUUGGGUGUCAGAAACGUGAUAAAUCA
....((((((((....((......(((((.(((((((((((((((((.....)))))))))))))))))))))))).)))))))).((........(((((((((((((.(((((.(((((................))))).((((.....))))...))))).....(((..........))).))))))).))))))..((((((((((((((((..(((((((.....)))))))..))))))))))))))))(((((((((......((....))...............................((((((((((......)))))))))).)))))))))..))..((((...(((((((((.(((((.................))))).)))))))))...)))). (-127.92)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UGAUUUAUCACGUUUCUGACACCCAAGAAAUAGCAAUGUUGGCAUGAGAAACGUGCUCAAUCACGCCCUUGCAAUGUAACAGCGAUUUGACAUAAAAUCGCUAUGGUUUUGUAAAGAUAAUUUUAUUAAAAAGUGGCAAUUGCGUUUUGACAUUGCAAAAGCGUAGGUUUUGCAAUGCAAAAGAGCCGCUUUUACCGUGCAAAACCUACGCUUUUGGAACGCGAAACAAUAGGUUUUACAAUGCCUUGAUUAUGAAGUGGUUAAACAACAACUAUGCUUAUGAAAAAUAUUUACAGCAUUUUCAUUUUAUUUCCGCCCCCUGAAUAUGCUGAAACUACCCAAUAAAAAAAGCACGACAAAUACGAAAUGUACUUGCCGUGCCCUUAUUUAUAUUAUGUGUAAUAUAGUUUCUUUA
(((((...(((((((((.(...((((.(........).))))..).)))))))))...))))).((((((.((.......((((((((......))))))))..(((.((((((((.((((((((((....))))).))))).((((((.(.((.(((((((((((((((((((....(((((.....)))))....))))))))))))))))))).)).)))))))......)))))))).))).......))))).)))........(((((((.(((((...(((((...((((((.((((................)))).))))))...................(((((.(((.(((.....))).))).)))))........)))))...))))))))))))...... (-110.09)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
908	250	201	72	23	pint:PI1702|5end_hypothetical_protein_1620587..1620817_POSITIVE
908	250	201	227	178	pint:PI0561|5end_hypothetical_protein_508952..509182_POSITIVE
877	260	212	110	62	pint:PI1760|5end_hypothetical_protein_1684413..1684643_POSITIVE
864	239	194	61	16	pint:PI0037|5end_hypothetical_protein_39354..39584_POSITIVE
833	230	181	161	112	pint:PI0211|5end_hypothetical_protein_204067..204297_POSITIVE
833	230	181	180	131	pint:PI0196|5end_hypothetical_protein_188435..188665_POSITIVE
807	240	194	189	143	pint:PI1437|5end_hypothetical_protein_1356088..1356318_POSITIVE
807	240	194	62	16	pint:PI1436|5end_hypothetical_protein_1355961..1356191_POSITIVE
787	270	221	92	43	pint:PI0926|5end_hypothetical_protein_856824..857054_POSITIVE
787	239	194	47	2	pint:PI0659|5end_hypothetical_protein_603203..603433_POSITIVE
778	230	181	114	65	pint:PI1371|5end_hypothetical_protein_1292359..1292589_POSITIVE
708	229	181	224	176	pint:PI2024|5end_hypothetical_protein_1978804..1979034_POSITIVE
708	229	181	51	3	pint:PI2022|5end_hypothetical_protein_1978631..1978861_POSITIVE
708	229	181	178	130	pint:PI0991|5end_conserved_hypothetical_protein_915309..915539_POSITIVE
688	229	181	184	136	pint:PI2046|5end_hypothetical_protein_1999030..1999260_POSITIVE
688	229	181	198	150	pint:PI0887|5end_hypothetical_protein_817536..817766_POSITIVE
688	229	181	91	43	pint:PI0867|5end_hypothetical_protein_803859..804089_POSITIVE
688	229	181	184	136	pint:PI0024|5end_hypothetical_protein_28378..28608_POSITIVE
682	218	172	187	141	pint:PI0653|5end_hypothetical_protein_596046..596276_POSITIVE
679	229	181	211	163	pint:PI1333|5end_conserved_hypothetical_protein_1250777..1251007_POSITIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
908	250	201	105	56	pint:PI0560|3end_hypothetical_protein_508910..509060_POSITIVE
881	240	194	117	71	pint:PI0905|3end_hypothetical_protein_834697..834847_POSITIVE
830	230	181	151	102	pint:PI0659|3end_hypothetical_protein_603396..603546_POSITIVE
824	240	194	117	71	pint:PI1521|3end_hypothetical_protein_1441461..1441611_POSITIVE
746	270	221	56	7	pint:PI1520|3end_hypothetical_protein_1441370..1441520_POSITIVE
708	229	181	133	85	pint:PI0568|3end_hypothetical_protein_513131..513281_POSITIVE
708	229	181	57	9	pint:PI0567|3end_hypothetical_protein_513055..513205_POSITIVE
704	229	181	145	97	pint:PI1041|3end_hypothetical_protein_960675..960825_POSITIVE
699	251	212	151	112	pint:PI1761|3end_hypothetical_protein_1684543..1684693_POSITIVE
688	229	181	145	97	pint:PI1797|3end_hypothetical_protein_1731559..1731709_POSITIVE
688	229	181	145	97	pint:PI0885|3end_hypothetical_protein_817563..817713_POSITIVE
688	229	181	145	97	pint:PI0866|3end_hypothetical_protein_803993..804143_POSITIVE
688	229	181	145	97	pint:PI0820|3end_hypothetical_protein_759980..760130_POSITIVE
688	229	181	84	36	pint:PI0819|3end_hypothetical_protein_759919..760069_POSITIVE
688	229	181	133	85	pint:PI0815|3end_hypothetical_protein_754677..754827_POSITIVE
688	229	181	133	85	pint:PI0095|3end_hypothetical_protein_91850..92000_POSITIVE
688	229	181	145	97	pint:PI0089|3end_hypothetical_protein_88355..88505_POSITIVE
670	229	181	133	85	pint:PI0638|3end_hypothetical_protein_582402..582552_POSITIVE
670	229	181	128	80	pint:PI0637|3end_hypothetical_protein_582397..582547_POSITIVE
664	230	181	137	85	pint:PI0081|3end_hypothetical_protein_80700..80850_POSITIVE