Origin IGS: aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 attgcgcaattcctgcaaactctgacggcgtactatctcctgttctgataattctaaaacgttcattttctctattaatcgaattataatctttatgatttgcaaatttaataaattatttgcaattccttgttgtttttgccttttttatacctttatatatgggttacgtttgcattgctgcacaagaatagtgtaaaacaaagttaaacaacacaccttaaaagttaaactaaaaatcgtgaaacacgctgagaagggcagttttctgcacaaagataaaatcgttttcaaataagcccactttttacgtgcaacgctaagcctattgaacatcaacaagttcaatgcttagtgggtagcactgtgcaatctaagcgcagcgtttaccacgcaaacagaactaaaaaggtaatagaaaggacaactttcgccttgtaaaacatacactttcgccctgcaaaagagccactattgccttgtaaaagcatagcttttggtcggcaagagtgccgcttttgaaaaatcaaaactgttttttaagtttcccaacccttatcttaatgtttcacggttctattttgctgcttttcaaatgttaaaccactcttcttttattagctatctttaactacactt Mask Tandem Repeat Region ================================================ aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Find is-nt database================================================ Query_seq: PI0611:PI0612|PI0611:PI0612:hypothetical protein:lysyl-tRNA synthetase:->->:559962..560600 639 aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI0611:PI0612|PI0611:PI0612:hypothetical protein:lysyl-tRNA synthetase:->->:559962..560600 639 aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI0611:PI0612|PI0611:PI0612:hypothetical protein:lysyl-tRNA synthetase:->->:559962..560600 639 aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Predict ORF larger than 30AA ================================================ Protein_Len: 47 Strand: + Start: 110 End: 250 ............................................................................................................. M I F Q K R H S C R P K A M L L Q G N S G S F A G R K C M F Y K A K V V L S I T F L V L F A W ..................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: + Start: 190 End: 285 ............................................................................................................................................................................................. M Y V L Q G E S C P F Y Y L F S S V C V V N A A L R L H S A T H .................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 292 End: 489 ................................................................................................................................................................................................................................................................................................... M N L L M F N R L S V A R K K W A Y L K T I L S L C R K L P F S A C F T I F S L T F K V C C L T L F Y T I L V Q Q C K R ...................................................................................................................................................... Protein_Len: 37 Strand: + Start: 528 End: 638 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M K F A N H K D Y N S I N R E N E R F R I I R T G D S T P S E F A G I A Q . Protein_Len: 42 Strand: + Start: 514 End: 639 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M A N N L L N L Q I I K I I I R L I E K M N V L E L S E Q E I V R R Q S L Q E L R N Protein_Len: 54 Strand: - Start: 444 End: 605 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................... V I R T C C H L R L G Y I F T Y F L C F C C P I A F L K N F K C I M F I I I R N I S F I F T K S N D S C S M .................................. Protein_Len: 31 Strand: - Start: 433 End: 525 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S Q K V S N K H L L A F T V W I Y L Y L F P L F L L S N C I M .................................................................................................................. Protein_Len: 48 Strand: - Start: 202 End: 345 ......................................................................................................................................................................................................... L A F T T R E I V K K T R N A H Y V S R K S Q V T S G V L C Q V Q Q H E I P K A N C T F L P S M ...................................................................................................................................................................................................................................................................................................... Protein_Len: 30 Strand: - Start: 41 End: 130 ........................................ C K F L L L I S G H F M L I L T P F S L F C N Q N K L L P M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 44 Strand: - Start: 12 End: 143 ........... L Y S I F S S H N L M Q F A A F Y F R S V N L Y P N P F K F F L K S K E F A A S K G V M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 82 Start: 528 End: 557 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATTTGCAAATCATAAAGATTATAAT.................................................................................. PromScan Matrix: RpoD-17 Strand: - Score: 82 Start: 550 End: 579 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATTTTCTCTATTAATCGAATTATAAT............................................................ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 70 HP_score: -2.3 Tail_Score: -5.22039 Start: 105 End: 126 Full_Region: ggtcggcaagagtgc cgcttttga aaaa tcaaaactg ttttttaagtttccc ........................................................................................................cgcttttgaaaaatcaaaactg................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 42 HP_score: -3.1 Tail_Score: -2.57564 Start: 162 End: 180 Full_Region: atacactttcgccct gcaaaag agcca ctattgc cttgtaaaagcatag .................................................................................................................................................................gcaaaagagccactattgc........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 51 HP_score: -4.3 Tail_Score: -3.29762 Start: 208 End: 222 Full_Region: TATGTTTTACAAGGC GAAAG TTGTC CTTTC TATTACCTTTTTAGT ...............................................................................................................................................................................................................GAAAGTTGTCCTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 47 HP_score: -2.0 Tail_Score: -3.69301 Start: 515 End: 540 Full_Region: tataatctttatgat ttgcaaat ttaataaatt atttgcaa ttccttgttgttttt ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttgcaaatttaataaattatttgcaa................................................................................................... Find igs database================================================ Query_seq: PI0611:PI0612|PI0611:PI0612:hypothetical protein:lysyl-tRNA synthetase:->->:559962..560600 639 aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Intra-Species Hit: Count: 1 Min: 1 Max: 639 Len: 639 Subject: pint_PI0611_PI0612|hypothetical protein:lysyl-tRNA synthetase|POSITIVE:POSITIVE|[559962,560600]|639 HSP 1 e-value: 0.0 bit: 1267.0 Len: 639 Query Start:1 Query End:639 Subject Strand: POSITIVE Subject Start: 1 Subject End: 639 aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat aagtgtagttaaagatagctaataaaagaagagtggtttaacatttgaaaagcagcaaaatagaaccgtgaaacattaagataagggttgggaaacttaaaaaacagttttgatttttcaaaagcggcactcttgccgaccaaaagctatgcttttacaaggcaatagtggctcttttgcagggcgaaagtgtatgttttacaaggcgaaagttgtcctttctattacctttttagttctgtttgcgtggtaaacgctgcgcttagattgcacagtgctacccactaagcattgaacttgttgatgttcaataggcttagcgttgcacgtaaaaagtgggcttatttgaaaacgattttatctttgtgcagaaaactgcccttctcagcgtgtttcacgatttttagtttaacttttaaggtgtgttgtttaactttgttttacactattcttgtgcagcaatgcaaacgtaacccatatataaaggtataaaaaaggcaaaaacaacaaggaattgcaaataatttattaaatttgcaaatcataaagattataattcgattaatagagaaaatgaacgttttagaattatcagaacaggagatagtacgccgtcagagtttgcaggaattgcgcaat Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAGUGUAGUUAAAGAUAGCUAAUAAAAGAAGAGUGGUUUAACAUUUGAAAAGCAGCAAAAUAGAACCGUGAAACAUUAAGAUAAGGGUUGGGAAACUUAAAAAACAGUUUUGAUUUUUCAAAAGCGGCACUCUUGCCGACCAAAAGCUAUGCUUUUACAAGGCAAUAGUGGCUCUUUUGCAGGGCGAAAGUGUAUGUUUUACAAGGCGAAAGUUGUCCUUUCUAUUACCUUUUUAGUUCUGUUUGCGUGGUAAACGCUGCGCUUAGAUUGCACAGUGCUACCCACUAAGCAUUGAACUUGUUGAUGUUCAAUAGGCUUAGCGUUGCACGUAAAAAGUGGGCUUAUUUGAAAACGAUUUUAUCUUUGUGCAGAAAACUGCCCUUCUCAGCGUGUUUCACGAUUUUUAGUUUAACUUUUAAGGUGUGUUGUUUAACUUUGUUUUACACUAUUCUUGUGCAGCAAUGCAAACGUAACCCAUAUAUAAAGGUAUAAAAAAGGCAAAAACAACAAGGAAUUGCAAAUAAUUUAUUAAAUUUGCAAAUCAUAAAGAUUAUAAUUCGAUUAAUAGAGAAAAUGAACGUUUUAGAAUUAUCAGAACAGGAGAUAGUACGCCGUCAGAGUUUGCAGGAAUUGCGCAAU ..((((((((.......(((.....(((((.((((....((((...(..((((((((...(((((.((((((((((...((.((((((.((....))......(((.(((((.((((.((((((.(.((((.(((((....((((((...))))))....))))).)))).).)))))).))))))))).)))..(((((((((((..((((((((..((((............(((((..((((((((...(((((((.(((((...(((..((((.....))))..))).(((((........))))).))))).))))))).))))))))....))))).....))))))))))))..)))))))....)))).)))))).))...))))))))))..))))).....(((.....))).))))))))..)..))))...)))).)))))....)))..(((((((........(((((....))))).....(((.(((((......((.((((((((..........)))))))).)).............(((........))).........)))))...((((((.........))))))..)))......)))))))..))))))))... (-166.03) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUUGCGCAAUUCCUGCAAACUCUGACGGCGUACUAUCUCCUGUUCUGAUAAUUCUAAAACGUUCAUUUUCUCUAUUAAUCGAAUUAUAAUCUUUAUGAUUUGCAAAUUUAAUAAAUUAUUUGCAAUUCCUUGUUGUUUUUGCCUUUUUUAUACCUUUAUAUAUGGGUUACGUUUGCAUUGCUGCACAAGAAUAGUGUAAAACAAAGUUAAACAACACACCUUAAAAGUUAAACUAAAAAUCGUGAAACACGCUGAGAAGGGCAGUUUUCUGCACAAAGAUAAAAUCGUUUUCAAAUAAGCCCACUUUUUACGUGCAACGCUAAGCCUAUUGAACAUCAACAAGUUCAAUGCUUAGUGGGUAGCACUGUGCAAUCUAAGCGCAGCGUUUACCACGCAAACAGAACUAAAAAGGUAAUAGAAAGGACAACUUUCGCCUUGUAAAACAUACACUUUCGCCCUGCAAAAGAGCCACUAUUGCCUUGUAAAAGCAUAGCUUUUGGUCGGCAAGAGUGCCGCUUUUGAAAAAUCAAAACUGUUUUUUAAGUUUCCCAACCCUUAUCUUAAUGUUUCACGGUUCUAUUUUGCUGCUUUUCAAAUGUUAAACCACUCUUCUUUUAUUAGCUAUCUUUAACUACACUU ..(((((((....(((((((......((((.((..............(((((((..........................))))))).........((.((((((((..........)))))))).))......))...))))........((((........))))...))))))))))).))).(((((.((((...((((..(((....))).......((((((.........((((((((((((...((((((((((.....(((......))).......((((((((.........((((((((.(((..((((((((..(((((((........)))))))))))))))((((((.((((((.......)))))).).)))))..)))....)...)))))))......(((((.....)))))...))).)))))..........))))).((((((.(.((((.(((((...(((((((...)))))))...))))).)))).).))))))........(((((........)))))...........))))).))))))))))))..........))))))....))))....)))).)))))......................... (-142.48) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 478 210 167 47 4 pint:PI0638|5end_hypothetical_protein_582218..582448_POSITIVE 448 200 151 148 99 pint:PI1948|5end_hypothetical_protein_1903084..1903314_POSITIVE 448 180 133 211 164 pint:PI1870|5end_hypothetical_protein_1815302..1815532_POSITIVE 445 189 141 49 1 pint:PI1869|5end_hypothetical_protein_1815131..1815361_POSITIVE 441 188 146 195 155 pint:PI0277|5end_hypothetical_protein_264980..265210_POSITIVE 440 210 162 92 44 pint:PI1604|5end_hypothetical_protein_1534017..1534247_POSITIVE 419 168 121 69 20 pint:PI1829|5end_hypothetical_protein_1769255..1769485_POSITIVE 405 165 121 52 8 pint:PI2144|5end_hypothetical_protein_2091954..2092184_POSITIVE 397 168 121 200 151 pint:PI0771|5end_conserved_hypothetical_protein_706524..706754_POSITIVE 389 168 121 231 178 pint:PI0159|5end_hypothetical_protein_151273..151503_POSITIVE 389 168 121 143 90 pint:PI0157|5end_hypothetical_protein_151185..151415_POSITIVE 385 168 121 77 24 pint:PI0755|5end_hypothetical_protein_686691..686921_POSITIVE 379 168 121 69 20 pint:PI2153|5end_hypothetical_protein_2099392..2099622_POSITIVE 379 168 121 69 20 pint:PI1567|5end_hypothetical_protein_1489229..1489459_POSITIVE 379 168 121 195 146 pint:PI0788|5end_3-methyladenine_DNA_glycosylase_(DNA-3-methyladenine_glycosylase_I)_726152..726382_POSITIVE 378 210 163 216 169 pint:PI0827|5end_hypothetical_protein_763991..764221_POSITIVE 376 168 123 66 18 pint:PI2131|5end_hypothetical_protein_2080678..2080908_POSITIVE 376 168 121 230 181 pint:PI2003|5end_hypothetical_protein_1960823..1961053_POSITIVE 376 168 121 69 20 pint:PI2002|5end_hypothetical_protein_1960662..1960892_POSITIVE 376 168 121 57 8 pint:PI1129|5end_hypothetical_protein_1055377..1055607_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 485 210 163 151 104 pint:PI0638|3end_hypothetical_protein_582402..582552_POSITIVE 485 210 163 146 99 pint:PI0637|3end_hypothetical_protein_582397..582547_POSITIVE 437 168 121 145 96 pint:PI1512|3end_hypothetical_protein_1429893..1430043_POSITIVE 414 189 145 126 82 pint:PI0061|3end_hypothetical_protein_60690..60840_POSITIVE 397 168 121 151 102 pint:PI1814|3end_hypothetical_protein_1753233..1753383_POSITIVE 377 210 167 151 108 pint:PI1252|3end_hypothetical_protein_1175440..1175590_POSITIVE 376 168 121 52 3 pint:PI0996|3end_hypothetical_protein_920660..920810_POSITIVE 376 168 121 111 62 pint:PI0759|3end_hypothetical_protein_693998..694148_POSITIVE 375 208 161 128 75 pint:PI0560|3end_hypothetical_protein_508910..509060_POSITIVE 373 165 121 120 76 pint:PI1356|3end_hypothetical_protein_1273340..1273490_POSITIVE 371 168 121 151 102 pint:PI0689|3end_hypothetical_protein_625877..626027_POSITIVE 369 189 141 148 100 pint:PI1761|3end_hypothetical_protein_1684543..1684693_POSITIVE 361 209 161 151 97 pint:PI0905|3end_hypothetical_protein_834697..834847_POSITIVE 358 168 121 151 102 pint:PI1340|3end_hypothetical_protein_1256872..1257022_POSITIVE 358 210 163 151 104 pint:PI1155|3end_hypothetical_protein_1080352..1080502_POSITIVE 354 210 162 147 99 pint:PI0670|3end_hypothetical_protein_611280..611430_POSITIVE 353 210 161 147 93 pint:PI2011|3end_hypothetical_protein_1970730..1970880_POSITIVE 353 168 121 52 3 pint:PI0054|3end_hypothetical_protein_54829..54979_POSITIVE 350 380 336 144 93 pint:PI0726|3end_hypothetical_protein_659253..659403_POSITIVE 348 165 121 150 106 pint:PI1922|3end_hypothetical_protein_1865454..1865604_POSITIVE