Origin IGS:
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctaactcccttatagtatcctaatgcaaatgcagcatgagcgtttttatgtctttgagcaccagcttgactatcatcaaggtcgttcagaacagagttaatatctaaattttttttcaaactaagacctgcctctaatcctttttcataagcacatgcagcacatttgtgtcgttctattcctccttgatcagttggaatggaattcataatatctgataagttcttgtggtcttttttacatgccatgattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
taatcgctggcgattagatttcaaatttatcatttatatattgctgttcggtaaaattctcaatcttcaacttgtataggagtagataggcttaaaactacaatgttcttagtaattcattgaatttagccattattttgtaacaacaagagggtcttaatgactattatttgaaattgcaagttaactctccctatataccaagaaaaggcatatgcactgaacgaaaagagaagatagaaacttcaattaatatttaccggacagcaataattttattaatcttattaaaaaatattaatcatggcatgtaaaaaagaccacaagaacttatcagatattatgaattccattccaactgatcaaggaggaatagaacgacacaaatgtgctgcatgtgcttatgaaaaaggattagaggcaggtcttagtttgaaaaaaaatttagatattaactctgttctgaacgaccttgatgatagtcaagctggtgctcaaagacataaaaacgctcatgctgcatttgcattaggatactataagggagttagccaacgtatagatgatgataataataaatagaaatggtattactgcccttttctatttttatcgaacatacactgttatatacaagagggt

Mask Tandem Repeat Region ================================================
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctaactcccttatagtatcctaatgcaaatgcagcatgagcgtttttatgtctttgagcaccagcttgactatcatcaaggtcgttcagaacagagttaatatctaaattttttttcaaactaagacctgcctctaatcctttttcataagcacatgcagcacatttgtgtcgttctattcctccttgatcagttggaatggaattcataatatctgataagttcttgtggtcttttttacatgccatgattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta

Find is-nt database================================================
Query_seq: PI0173:PI0174|PI0173:PI0174:hypothetical protein:succinyl-CoA synthetase alpha subunit:->->:165619..166260 642
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctaactcccttatagtatcctaatgcaaatgcagcatgagcgtttttatgtctttgagcaccagcttgactatcatcaaggtcgttcagaacagagttaatatctaaattttttttcaaactaagacctgcctctaatcctttttcataagcacatgcagcacatttgtgtcgttctattcctccttgatcagttggaatggaattcataatatctgataagttcttgtggtcttttttacatgccatgattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: PI0173:PI0174|PI0173:PI0174:hypothetical protein:succinyl-CoA synthetase alpha subunit:->->:165619..166260 642
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctaactcccttatagtatcctaatgcaaatgcagcatgagcgtttttatgtctttgagcaccagcttgactatcatcaaggtcgttcagaacagagttaatatctaaattttttttcaaactaagacctgcctctaatcctttttcataagcacatgcagcacatttgtgtcgttctattcctccttgatcagttggaatggaattcataatatctgataagttcttgtggtcttttttacatgccatgattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: PI0173:PI0174|PI0173:PI0174:hypothetical protein:succinyl-CoA synthetase alpha subunit:->->:165619..166260 642
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctaactcccttatagtatcctaatgcaaatgcagcatgagcgtttttatgtctttgagcaccagcttgactatcatcaaggtcgttcagaacagagttaatatctaaattttttttcaaactaagacctgcctctaatcctttttcataagcacatgcagcacatttgtgtcgttctattcctccttgatcagttggaatggaattcataatatctgataagttcttgtggtcttttttacatgccatgattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
Intra-Species Hit: Count: 0

Inter-species Hit: Count: 2	Min: 94	Max: 339	Len: 246
Subject: UniRef90_UPI00005F866A Cluster: hypothetical protein YmolA_01002368; n=1; Yersinia mollaretii ATCC 43969|Rep: hypothetical protein YmolA_01002368 - Yersinia mollaretii ATCC 43969
HSP  1	e-value: 1.0E-12	bit: 75.5	Len: 246	Query Start:94	Query End:339	Subject Strand: null	Subject Start: 45	Subject End: 124
............................................................................................. M  A  C  K  K  D  H  K  N  L  S  D  I  M  N  S  I  P  T  D  Q  G  G  I  E  R  H  K  C  A  A  C  A  Y  E  K  G  L  E  A  G  L  S  L  K  K  N  L  D  I  N  S  V  L  N  D  L  D  D  S  Q  A  G  A  Q  R  H  K  N  A  H  A  A  F  A  L  G  Y  Y  K  G  V ...............................................................................................................................................................................................................................................................................................................
............................................................................................. M  A  I  C  Q  D  M  H  R  Y  W  S  L  L  A  G  L  P  D  D  Q  G  G  V  G  R  H  K  C  C  G  C  A  Y  E  Q  G  Y  N  A  G  F  A  R  S  G  H  I  W  V  N  -  -  L  D  S  L  H  Q  S  Q  A  G  V  V  R  H  K  S  P  H  A  A  Y  A  K  G  Y  H  D  G  M ...............................................................................................................................................................................................................................................................................................................

Subject: UniRef90_Q6LJV1 Cluster: Hypothetical protein; n=1; Photobacterium profundum|Rep: Hypothetical protein - Photobacterium profundum (Photobacterium sp. (strain SS9))
HSP  1	e-value: 3.0E-8	bit: 60.8	Len: 246	Query Start:94	Query End:339	Subject Strand: null	Subject Start: 1	Subject End: 80
............................................................................................. M  A  C  K  K  D  H  K  N  L  S  D  I  M  N  S  I  P  T  D  Q  G  G  I  E  -  R  H  K  C  A  A  C  A  Y  E  K  G  L  E  A  G  L  S  L  K  K  N  L  D  I  N  S  V  L  N  D  L  D  D  S  Q  A  G  A  Q  R  H  K  N  A  H  A  A  F  A  L  G  Y  Y  K  G  V ...............................................................................................................................................................................................................................................................................................................
............................................................................................. M  T  C  Q  Q  Q  H  R  Y  D  P  E  F  -  E  L  L  P  H  D  Q  S  Q  F  N  G  R  H  K  C  A  G  C  A  Y  D  K  G  Y  S  L  G  L  L  K  A  P  S  V  N  I  D  -  -  F  E  S  L  P  N  S  Q  A  G  T  V  R  H  R  S  V  Q  A  A  F  A  K  G  Y  L  D  G  V ...............................................................................................................................................................................................................................................................................................................


accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
Predict ORF larger than 30AA ================================================
Protein_Len: 47	Strand: -	Start: 332	End: 472
........................................................................................................................................................................................................................................................................................................................................... M  G  H  N  I  N  K  L  L  I  L  L  I  I  A  T  R  Y  I  N  I  S  T  E  I  K  E  K  R  E  T  C  I  G  K  R  P  I  Y  P  S  N  V  Q  L  K  M ..........................................................................................................................................................................
Protein_Len: 60	Strand: -	Start: 64	End: 348
............................................................... L  D  N  L  V  S  N  I  D  L  N  K  K  L  S  L  G  A  E  L  G  K  E  Y  A  C  A  A  C  K  H  R  E  I  G  G  Q  D  T  P  I  S  N  M  I  D  S  L  N  K  H  D  K  K  C  A  M  I  L  M ......................................................................................................................................................................................................................................................................................................

accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
Predict TransTerm conf > 70================================================
TransTerm Strand: +	Conf: 48	HP_score: -3.3	Tail_Score: -3.26813	Start: 265	End: 295	Full_Region: AGCACATTTGTGTCG TTCTATTCCTCCT TGATC AGTTGGAATGGAA TTCATAATATCTGAT
........................................................................................................................................................................................................................................................................TTCTATTCCTCCTTGATCAGTTGGAATGGAA...........................................................................................................................................................................................................................................................................................................................................................

Find igs database================================================
Query_seq: PI0173:PI0174|PI0173:PI0174:hypothetical protein:succinyl-CoA synthetase alpha subunit:->->:165619..166260 642
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngattaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
Intra-Species Hit: Count: 1	Min: 1	Max: 642	Len: 642
Subject: pint_PI0173_PI0174|hypothetical protein:succinyl-CoA synthetase alpha subunit|POSITIVE:POSITIVE|[165619,166260]|642
HSP  1	e-value: 1.0E-170	bit: 599.0	Len: 302	Query Start:341	Query End:642	Subject Strand: POSITIVE	Subject Start: 341	Subject End: 642
....................................................................................................................................................................................................................................................................................................................................................attaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
....................................................................................................................................................................................................................................................................................................................................................attaatattttttaataagattaataaaattattgctgtccggtaaatattaattgaagtttctatcttctcttttcgttcagtgcatatgccttttcttggtatatagggagagttaacttgcaatttcaaataatagtcattaagaccctcttgttgttacaaaataatggctaaattcaatgaattactaagaacattgtagttttaagcctatctactcctatacaagttgaagattgagaattttaccgaacagcaatatataaatgataaatttgaaatctaatcgccagcgatta
HSP  2	e-value: 3.0E-45	bit: 184.0	Len: 93	Query Start:1	Query End:93	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 93
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggct.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
accctcttgtatataacagtgtatgttcgataaaaatagaaaagggcagtaataccatttctatttattattatcatcatctatacgttggct.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
ACCCUCUUGUAUAUAACAGUGUAUGUUCGAUAAAAAUAGAAAAGGGCAGUAAUACCAUUUCUAUUUAUUAUUAUCAUCAUCUAUACGUUGGCUAACUCCCUUAUAGUAUCCUAAUGCAAAUGCAGCAUGAGCGUUUUUAUGUCUUUGAGCACCAGCUUGACUAUCAUCAAGGUCGUUCAGAACAGAGUUAAUAUCUAAAUUUUUUUUCAAACUAAGACCUGCCUCUAAUCCUUUUUCAUAAGCACAUGCAGCACAUUUGUGUCGUUCUAUUCCUCCUUGAUCAGUUGGAAUGGAAUUCAUAAUAUCUGAUAAGUUCUUGUGGUCUUUUUUACAUGCCAUGAUUAAUAUUUUUUAAUAAGAUUAAUAAAAUUAUUGCUGUCCGGUAAAUAUUAAUUGAAGUUUCUAUCUUCUCUUUUCGUUCAGUGCAUAUGCCUUUUCUUGGUAUAUAGGGAGAGUUAACUUGCAAUUUCAAAUAAUAGUCAUUAAGACCCUCUUGUUGUUACAAAAUAAUGGCUAAAUUCAAUGAAUUACUAAGAACAUUGUAGUUUUAAGCCUAUCUACUCCUAUACAAGUUGAAGAUUGAGAAUUUUACCGAACAGCAAUAUAUAAAUGAUAAAUUUGAAAUCUAAUCGCCAGCGAUUA
........((((((....))))))....((((((((((((((.((.........)).)))))))))....)))))..........(((((((((((((................(((....)))...((((((((((.(((...(..(((....)))..)....))).)))).)))))).....))))))..............(((((((..............(((((.....(((((((.((.(((((.....(((((..((((((((((..((.....))..)))))))))).)))))...))).)).)).)))))))..................(((((......)))))..))))).......(((((((((.(((((((............((((.((((((.(((............(((((((.......))))))).(((((.((((..(((.(((..(((......(((.....)))....)))..))).)))..))))((((((((((((((............))))).)))))..))))......)))))....)))..)))))).))))..))))))).))))))))).............))))))).......))))))).... (-135.44)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UAAUCGCUGGCGAUUAGAUUUCAAAUUUAUCAUUUAUAUAUUGCUGUUCGGUAAAAUUCUCAAUCUUCAACUUGUAUAGGAGUAGAUAGGCUUAAAACUACAAUGUUCUUAGUAAUUCAUUGAAUUUAGCCAUUAUUUUGUAACAACAAGAGGGUCUUAAUGACUAUUAUUUGAAAUUGCAAGUUAACUCUCCCUAUAUACCAAGAAAAGGCAUAUGCACUGAACGAAAAGAGAAGAUAGAAACUUCAAUUAAUAUUUACCGGACAGCAAUAAUUUUAUUAAUCUUAUUAAAAAAUAUUAAUCAUGGCAUGUAAAAAAGACCACAAGAACUUAUCAGAUAUUAUGAAUUCCAUUCCAACUGAUCAAGGAGGAAUAGAACGACACAAAUGUGCUGCAUGUGCUUAUGAAAAAGGAUUAGAGGCAGGUCUUAGUUUGAAAAAAAAUUUAGAUAUUAACUCUGUUCUGAACGACCUUGAUGAUAGUCAAGCUGGUGCUCAAAGACAUAAAAACGCUCAUGCUGCAUUUGCAUUAGGAUACUAUAAGGGAGUUAGCCAACGUAUAGAUGAUGAUAAUAAUAAAUAGAAAUGGUAUUACUGCCCUUUUCUAUUUUUAUCGAACAUACACUGUUAUAUACAAGAGGGU
((((((....))))))..((((....(((((((((((((((((((((((((((((.......((((((..((((((((((((.((...((((........(((((............))))).....)))).....(((((((...((((..((((.....))))....))))...)))))))....))))))...)))).))))...((((....)).))...........)))))).((....))........)))))))))))))))).................................((((.(((..........)))....(((((.((.((((.(((.(((.(((((..((.....))..))))).))).....(((((((...(((((.(((((((.....(((.(((((....((((.(((((......))))).)))).....))))).)))..((.(.((((((....)))))).).)).........)))))....)).))))).)))))))..))).))))))))))).......))))..)))))))))))))..((((.(((((((((.((((....))))..)))))))))))))..((((.....))))........)))).. (-143.82)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
310	390	345	141	90	pint:PI1182|5end_hypothetical_protein_1104025..1104255_POSITIVE
306	448	401	90	27	pint:PI1211|5end_ubiquinone/menaquinone_biosynthesis_methyltransferase_1129926..1130156_POSITIVE
303	290	241	179	131	pint:PI0334|5end_hypothetical_protein_313234..313464_POSITIVE
302	169	123	59	1	pint:PI1021|5end_conserved_hypothetical_protein;_possible_methyltransferase_938985..939215_POSITIVE
295	168	122	198	142	pint:PI2102|5end_DNA_topoisomerase_IV,_subunit_B_2055706..2055936_POSITIVE
290	133	96	195	159	pint:PI0122|5end_outer_membrane_protein,_ompH_family_113319..113549_POSITIVE
287	156	111	190	135	pint:PI0478|5end_50S_ribosomal_protein_L30_440923..441153_POSITIVE
282	160	115	202	157	pint:PI0458|5end_translation_elongation_factor_G_(EF-G)/tetracycline_resistance_factor_Q_429877..430107_POSITIVE
281	440	394	106	40	pint:PI1849|5end_conserved_hypothetical_protein;_possible_acyltransferase_family_protein_1794916..1795146_POSITIVE
281	391	371	178	158	pint:PI1294|5end_hypothetical_protein_1208490..1208720_POSITIVE
281	290	242	73	26	pint:PI0262|5end_conserved_hypothetical_protein_254685..254915_POSITIVE
279	288	242	83	27	pint:PI1637|5end_hypothetical_protein_1554500..1554730_POSITIVE
278	627	581	211	168	pint:PI1085|5end_ISPg4-related_transposase_(IS5_family)_1005151..1005381_POSITIVE
277	263	221	168	112	pint:PI1332|5end_aminotransferase,_possible_pyridoxal-phosphate-dependent_aminotransferase_1249374..1249604_POSITIVE
274	147	106	71	28	pint:PI0581|5end_conserved_hypothetical_protein_525055..525285_POSITIVE
273	266	229	182	141	pint:PI2123|5end_adenine_phosphoribosyltransferase_2071711..2071941_POSITIVE
273	157	120	50	13	pint:PI1011|5end_cytochrome_c_biogenesis_protein_CycY_932115..932345_POSITIVE
272	279	231	191	125	pint:PI1931|5end_alpha_glycan_phosphorylase,_maltodextrin_phosphorylase_1875456..1875686_POSITIVE
272	450	403	119	79	pint:PI1670|5end_hypothetical_protein_1583725..1583955_POSITIVE
272	287	253	46	12	pint:PI0771|5end_conserved_hypothetical_protein_706524..706754_POSITIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
310	390	345	54	3	pint:PI1181|3end_ISPg4-related_transposase_(IS5_family)_1104018..1104168_POSITIVE
298	158	114	44	1	pint:PI0024|3end_hypothetical_protein_28559..28709_POSITIVE
295	116	71	119	69	pint:PI0743|3end_hypothetical_protein_673026..673176_POSITIVE
281	440	394	125	59	pint:PI1848|3end_hypothetical_protein_1795015..1795165_POSITIVE
281	391	371	55	35	pint:PI1293|3end_ISPg4-related_transposase_(IS5_family)_1208447..1208597_POSITIVE
281	391	371	55	35	pint:PI1085|3end_ISPg4-related_transposase_(IS5_family)_1006499..1006649_POSITIVE
281	290	242	73	26	pint:PI0261|3end_conjugative_transposon_protein,_TraK_254765..254915_POSITIVE
274	147	106	150	107	pint:PI0582|3end_hypothetical_protein_525214..525364_POSITIVE
273	266	229	126	85	pint:PI2121|3end_glucose_inhibited_division_protein_A_2071735..2071885_POSITIVE
273	157	120	50	13	pint:PI1010|3end_conserved_hypothetical_protein_932195..932345_POSITIVE
272	450	403	119	79	pint:PI1669|3end_hypothetical_protein_1583805..1583955_POSITIVE
270	166	122	137	94	pint:PI0494|3end_hypothetical_protein_455170..455320_POSITIVE
268	440	394	88	32	pint:PI1913|3end_conserved_hypothetical_protein_1858008..1858158_POSITIVE
264	339	306	33	3	pint:PI0657|3end_conserved_hypothetical_protein_602167..602317_POSITIVE
263	136	97	97	64	pint:PI0269|3end_conserved_hypothetical_protein_261480..261630_POSITIVE
263	466	423	84	49	pint:PI0083|3end_tyrosyl-tRNA_synthetase_84115..84265_POSITIVE
262	157	120	128	76	pint:PI1572|3end_hypothetical_protein_1498215..1498365_POSITIVE
259	457	415	116	84	pint:PI1191|3end_phosphoribosyl_pyrophosphate_synthetase_1110377..1110527_POSITIVE
257	387	369	51	33	pint:PI1259|3end_ISPg4-related_transposase_(IS5_family)_1182089..1182239_POSITIVE
256	166	121	52	4	pint:PI1606|3end_conserved_hypothetical_protein_1535565..1535715_POSITIVE