Origin IGS: taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 aatctatattattttgtttatacgcttttcaaaataaatataaaaaagacagaatcccgacataatcccgatgtcagaattccattacctcttttttactactttattagaacgctgcaaaggtagtccttatttccgatattccaaagtaaaggaggttaaaaattattagtagtcaaaaacgaaagtttattccatcagccattcttcctattaccacacatcgtaaaagctcgggcttgacagtggtgtctatgcgagaagcgatacttaccaaagggaattgattttctttttcttgctcaaggtaaataccccaaaattactttggttttgtaaagataattcattgaaaaacgataatttcgatttggcattgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacacttttggaatgcaaaacaataggttttataatacactgacaagcaataggttacacaatagttgtgcttgtgaaaaatatttacagttctattaggttattcttgcctataaaacatacaggttccgctaaattcctgctattccattccattgatacaagaaagtaagaatagtcctatcggattgaaagaaacaaaaagtggcagatgcttttatcgagcatctgccacttcttttatttatatgtacctgcgatta Mask Tandem Repeat Region ================================================ taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Find is-nt database================================================ Query_seq: PI0145:PI0146|PI0145:PI0146:secDF export membrane protein:transcription elongation factor:->->:139785..140477 693 taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI0145:PI0146|PI0145:PI0146:secDF export membrane protein:transcription elongation factor:->->:139785..140477 693 taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI0145:PI0146|PI0145:PI0146:secDF export membrane protein:transcription elongation factor:->->:139785..140477 693 taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Predict ORF larger than 30AA ================================================ Protein_Len: 38 Strand: + Start: 16 End: 129 ............... M N K R S G R C S I K A S A T F C F F Q S D R T I L T F L Y Q W N G I A G I .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 182 End: 388 ..................................................................................................................................................................................... M F H K H N Y C V T Y C L S V Y Y K T Y C F A F Q K C R F C T V K A A V L H C K T Y A F A M P N R N Y R F S M N Y L Y K ................................................................................................................................................................................................................................................................................................................. Protein_Len: 51 Strand: + Start: 268 End: 420 ........................................................................................................................................................................................................................................................................... M H G K S G C F A L Q N L R F R N A K S K L S F F N E L S L Q N Q S N F G V F T L S K K K K I N S L W ................................................................................................................................................................................................................................................................................. Protein_Len: 45 Strand: + Start: 381 End: 515 ............................................................................................................................................................................................................................................................................................................................................................................................ M Y L E Q E K E N Q F P L V S I A S R I D T T V K P E L L R C V V I G R M A D G I N F R F .................................................................................................................................................................................. Protein_Len: 30 Strand: - Start: 571 End: 660 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R Q L T R I F Y Y F L P L P I R V D P N H R S E T K K I N M ................................. Protein_Len: 36 Strand: - Start: 525 End: 632 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Y N K V E K V K S Y R F Y P S G K C R E L L T T F F L Y H F E S M P I M ............................................................. Protein_Len: 40 Strand: - Start: 410 End: 529 ......................................................................................................................................................................................................................................................................................................................................................................................................................... N G K T L I A E R M S V V T L G S S K R H T T I P L I A S P I F K R K Q S S I M .................................................................................................................................................................... Protein_Len: 37 Strand: - Start: 224 End: 334 ............................................................................................................................................................................................................................... H I I F G I T K C E L L T P K A R Y F R S N Q M A F G V S E C H W I S I M ....................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 168 End: 410 ....................................................................................................................................................................... Y F R N N Q M G F T Y T K C P L L P Q K A N C F R R K R L A L D F N D N K L S N D K C F W L L K P T N V K L L F F F I M ........................................................................................................................................................................................................................................................................................... Protein_Len: 40 Strand: - Start: 95 End: 214 .............................................................................................. K R T D I S H F L L F K A S G T H K I P L F L R I S S Y I N K V L V V I T Y G M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 48 Strand: - Start: 1 End: 144 L R L Y M Y I F S T A S A R Y F C R G S K T E K L G I P S N K S E Q I L P I S Y C S N L P V Q M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 85 Start: 228 End: 257 ...................................................................................................................................................................................................................................TTTGGAATGCAAAACAATAGGTTTTATAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 100 HP_score: -14.4 Tail_Score: -4.46112 Start: 23 End: 65 Full_Region: AGGTACATATAAATA AAAGAAGTGGCAGATGCT CGATAAA AGCATCTGCCACTTTTTG TTTCTTTCAATCCGA ......................AAAGAAGTGGCAGATGCTCGATAAAAGCATCTGCCACTTTTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -14.6 Tail_Score: -5.07523 Start: 26 End: 62 Full_Region: gattgaaagaaacaa aaagtggcagatgctt ttatc gagcatctgccacttc ttttatttatatgta .........................aaagtggcagatgcttttatcgagcatctgccacttc....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -16.3 Tail_Score: -4.60302 Start: 29 End: 59 Full_Region: tgaaagaaacaaaaa gtggcagatgctt ttatc gagcatctgccac ttcttttatttatat ............................gtggcagatgcttttatcgagcatctgccac.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 90 HP_score: -11.4 Tail_Score: -3.57144 Start: 259 End: 309 Full_Region: TTTTGCATTCCAAAA GTGTAGGTTTTGCACGGTAAAA GCGGCTG TTTTGCATTGCAAAACCTACGC TTTCGCAATGCCAAA ..................................................................................................................................................................................................................................................................GTGTAGGTTTTGCACGGTAAAAGCGGCTGTTTTGCATTGCAAAACCTACGC................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 75 HP_score: -7.0 Tail_Score: -4.13767 Start: 259 End: 309 Full_Region: tttggcattgcgaaa gcgtaggttttgcaatgcaaaa cagccgc ttttaccgtgcaaaacctacac ttttggaatgcaaaa ..................................................................................................................................................................................................................................................................gcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacac................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 64 HP_score: -4.3 Tail_Score: -4.3898 Start: 363 End: 377 Full_Region: ctcaaggtaaatacc ccaaa attac tttgg ttttgtaaagataat ..........................................................................................................................................................................................................................................................................................................................................................................ccaaaattactttgg............................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 64 HP_score: -4.4 Tail_Score: -4.40478 Start: 610 End: 644 Full_Region: GTAAAAAAGAGGTAA TGGAATTCTGACAT CGGGATT ATGTCGGGATTCTG TCTTTTTTATATTTA .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATTCTGACATCGGGATTATGTCGGGATTCTG................................................. TransTerm Strand: + Conf: 70 HP_score: -7.0 Tail_Score: -3.76002 Start: 612 End: 642 Full_Region: AAAAAAGAGGTAATG GAATTCTGACAT CGGGATT ATGTCGGGATTC TGTCTTTTTTATATT ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCTGACATCGGGATTATGTCGGGATTC................................................... Find igs database================================================ Query_seq: PI0145:PI0146|PI0145:PI0146:secDF export membrane protein:transcription elongation factor:->->:139785..140477 693 taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Intra-Species Hit: Count: 56 Min: 1 Max: 693 Len: 693 Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 0.0 bit: 1374.0 Len: 693 Query Start:1 Query End:693 Subject Strand: POSITIVE Subject Start: 1 Subject End: 693 taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt taatcgcaggtacatataaataaaagaagtggcagatgctcgataaaagcatctgccactttttgtttctttcaatccgataggactattcttactttcttgtatcaatggaatggaatagcaggaatttagcggaacctgtatgttttataggcaagaataacctaatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatcaattccctttggtaagtatcgcttctcgcatagacaccactgtcaagcccgagcttttacgatgtgtggtaataggaagaatggctgatggaataaactttcgtttttgactactaataatttttaacctcctttactttggaatatcggaaataaggactacctttgcagcgttctaataaagtagtaaaaaagaggtaatggaattctgacatcgggattatgtcgggattctgtcttttttatatttattttgaaaagcgtataaacaaaataatatagatt Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 2.0E-49 bit: 198.0 Len: 116 Query Start:227 Query End:342 Subject Strand: NEGATIVE Subject Start: 762 Subject End: 877 ..................................................................................................................................................................................................................................tattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc............................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................tattataaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgttgcaaaacctacgctttcgcaacgccaaatcgaaattatcatttttc............................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 5.0E-47 bit: 190.0 Len: 131 Query Start:233 Query End:363 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 274 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctcttttgcaacgcaaaacctacgctttcgcaatgtcaaatcgaaattatcattttttcaacgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1728_PI1729|ATP-dependent Clp protease, proteolytic subunit:FKBP-type peptidyl-prolyl cis-trans isomerase, trigger factor|POSITIVE:POSITIVE|[1647719,1648555]|837 HSP 1 e-value: 2.0E-43 bit: 178.0 Len: 189 Query Start:175 Query End:363 Subject Strand: POSITIVE Subject Start: 358 Subject End: 547 ..............................................................................................................................................................................tgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt-tcaatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................tgtaaatattttttacaagcataactgttgtgtaaccgttttattatcagtgtgttataaaacctattgtttcgcattgtaaaagagccgcttttgcacggtaaaagcggctcttttgccttgcaaaacctacgcttttgcaacgtcaaatcgaaattaccgttttctcaacgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1441_PI1442|hypothetical protein:radical-activating enzyme (pyruvate-formate lyase-activating enzyme)|POSITIVE:POSITIVE|[1363734,1364088]|355 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 133 Query Start:233 Query End:365 Subject Strand: POSITIVE Subject Start: 86 Subject End: 219 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc-aatgaattatctttacaaaacca........................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgctttcgcaacgtcaaatcgaaaataccgttttccttgtaaattatctttacaaaacca........................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1391_PI1392|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1311755,1312040]|286 HSP 1 e-value: 1.0E-38 bit: 163.0 Len: 177 Query Start:233 Query End:409 Subject Strand: POSITIVE Subject Start: 57 Subject End: 234 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc-aatgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaatca............................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgctgcaaaacagccgctttcgcaacgccaaatcgaaattaccgtttttcgtcggaattatctttacaaaacgaaagagatttttcagtatttgccttatgcaacaaaaagagaatca............................................................................................................................................................................................................................................................................................ Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 2.0E-37 bit: 159.0 Len: 131 Query Start:233 Query End:363 Subject Strand: POSITIVE Subject Start: 107 Subject End: 238 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc-aatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcgtaggttttacacggcaaaagcggctgttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcttacgaataatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1688_PI1689|possible GTPase:conserved hypothetical protein|POSITIVE:POSITIVE|[1603964,1604449]|486 HSP 1 e-value: 6.0E-37 bit: 157.0 Len: 150 Query Start:219 Query End:368 Subject Strand: POSITIVE Subject Start: 160 Subject End: 310 ..........................................................................................................................................................................................................................tgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt-tcaatgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................................................................tgtcagcgtgttataaaacctattgttttgcattgtaaaagcgtaggttttgcacggtaaaagcggctcttttgcatcgcaaaacatacgctttcgcaacgtcaaatcgaaattatcattttccctccgaattatctttacaaaatcaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0195_PI0196|epimerase/reductase:hypothetical protein|POSITIVE:POSITIVE|[188263,188574]|312 HSP 1 e-value: 6.0E-37 bit: 157.0 Len: 107 Query Start:226 Query End:332 Subject Strand: NEGATIVE Subject Start: 176 Subject End: 282 .................................................................................................................................................................................................................................gtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaatt......................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................gtattacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaatt......................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406 HSP 1 e-value: 1.0E-35 bit: 153.0 Len: 140 Query Start:229 Query End:368 Subject Strand: POSITIVE Subject Start: 187 Subject End: 327 ....................................................................................................................................................................................................................................ttataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaa-tgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................ttataaaacgtgttgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcaacgcaaaacctacgctttcgcaatgccaaagcgcagttatccttttttaagggaattatctttacaaaacaaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 4.0E-35 bit: 151.0 Len: 139 Query Start:226 Query End:364 Subject Strand: NEGATIVE Subject Start: 213 Subject End: 352 .................................................................................................................................................................................................................................gtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatg-aattatctttacaaaacc......................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................gtattgtaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttcagcgaaattatctttacaaaacc......................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:278 Query End:312 Subject Strand: POSITIVE Subject Start: 266 Subject End: 300 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcaacgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 6.0E-34 bit: 147.0 Len: 141 Query Start:228 Query End:368 Subject Strand: NEGATIVE Subject Start: 73 Subject End: 214 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatg-aattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctcttttgcatcgcaaaacagccgctttcgcaatgccaaagcgcaattaccacttttcaacgaaattatctttacaaaagcaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 9.0E-33 bit: 143.0 Len: 135 Query Start:228 Query End:362 Subject Strand: NEGATIVE Subject Start: 141 Subject End: 276 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attataaaacctattgttttgcgttccaaaagcgtaggttttgcacggtaaaagcggctgttttgcattgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaagagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415 HSP 1 e-value: 4.0E-32 bit: 141.0 Len: 134 Query Start:232 Query End:365 Subject Strand: POSITIVE Subject Start: 178 Subject End: 312 .......................................................................................................................................................................................................................................taaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaat-gaattatctttacaaaacca........................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................taaaacctattgtttcgcgttccaaaagcgtaggttttgcacggtaaaagcggctcttttgcattgcaaaacctacgcttttgcaatgtcaaaacgcaattgccactttttaataaaattatctttacaaaacca........................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1981_PI1982|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1938199,1938578]|380 HSP 1 e-value: 1.0E-31 bit: 139.0 Len: 106 Query Start:227 Query End:332 Subject Strand: NEGATIVE Subject Start: 175 Subject End: 280 ..................................................................................................................................................................................................................................tattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaatt......................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................tattataaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgaaatgcaaaacagccgctttcgcaatgtcaaaccgaaatt......................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1958_PI1959|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1917430,1917847]|418 HSP 1 e-value: 1.0E-31 bit: 139.0 Len: 106 Query Start:227 Query End:332 Subject Strand: NEGATIVE Subject Start: 213 Subject End: 318 ..................................................................................................................................................................................................................................tattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaatt......................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................tattataaaacctattgttttgcattccaaaagcgtaggttttacacggtaaaagcggctgttttgcaatgcaaaacagccgcttttgcaatgtcaaaccgaaatt......................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 27 Query Start:277 Query End:303 Subject Strand: POSITIVE Subject Start: 232 Subject End: 258 ....................................................................................................................................................................................................................................................................................aaaagcggctgttttgcattgcaaaac...................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................aaaagcggctgttttgcattgcaaaac...................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 1.0E-31 bit: 139.0 Len: 141 Query Start:228 Query End:368 Subject Strand: NEGATIVE Subject Start: 195 Subject End: 335 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgc-aaacagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0948_PI0949|hypothetical protein:endonuclease|POSITIVE:POSITIVE|[882039, 882403]|365 HSP 1 e-value: 6.0E-31 bit: 137.0 Len: 136 Query Start:233 Query End:368 Subject Strand: NEGATIVE Subject Start: 135 Subject End: 271 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc-aatgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcattgtaaaagcgtaggttttacacggtcaaagcggctgttttgcgatgcaaaacagccgctttcgcaatgccaaatcgaaattatcattttccttacgaattatccttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 9.0E-30 bit: 133.0 Len: 134 Query Start:228 Query End:361 Subject Strand: POSITIVE Subject Start: 382 Subject End: 516 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttca-atgaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ ...................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaacagccgctttcgcaatgccaaatcgaaattatcatttttcatcagaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:278 Query End:312 Subject Strand: NEGATIVE Subject Start: 432 Subject End: 466 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcgatgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 6.0E-28 bit: 127.0 Len: 135 Query Start:228 Query End:362 Subject Strand: NEGATIVE Subject Start: 155 Subject End: 290 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt-tcaatgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagcagctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0652_PI0653|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[595853,596185]|333 HSP 1 e-value: 3.0E-26 bit: 121.0 Len: 136 Query Start:228 Query End:363 Subject Strand: NEGATIVE Subject Start: 146 Subject End: 282 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc-aatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcgtaggttttgcaaggcaaaagagccgcttttggacggtaaaacctacactttcgcagtgccaaatcgaaattatcgtttttcttcagaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-6 bit: 56.0 Len: 36 Query Start:277 Query End:312 Subject Strand: POSITIVE Subject Start: 219 Subject End: 254 ....................................................................................................................................................................................................................................................................................aaaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................................................................................aaaagcggctcttttgccttgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 100 Query Start:225 Query End:324 Subject Strand: NEGATIVE Subject Start: 226 Subject End: 325 ................................................................................................................................................................................................................................tgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaa................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................tgtattacaaaacctattgttttgcattccaaaagcgtaggttttacacgataaaagcggctgttttgcgttgcaaaacagccactttcgcaatgtcaaa................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1577_PI1578|conserved hypothetical protein:rod shape-determining protein|POSITIVE:POSITIVE|[1503940,1504327]|388 HSP 1 e-value: 3.0E-23 bit: 111.0 Len: 131 Query Start:229 Query End:359 Subject Strand: NEGATIVE Subject Start: 72 Subject End: 203 ....................................................................................................................................................................................................................................ttataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt-tcaatgaattatctttaca.............................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................................ttataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaacgtcaaatcgaaattatagttttcttaatgaattatctttaca.............................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 1.0E-22 bit: 109.0 Len: 182 Query Start:225 Query End:406 Subject Strand: NEGATIVE Subject Start: 102 Subject End: 284 ................................................................................................................................................................................................................................tgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaa-tgaattatctttacaaaaccaaagtaattttggggtatttaccttgagcaagaaaaagaaaa............................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................tgtattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcattttttaagagaattatctttacaaaacgaatggtattttttagtatttgccttgagtaagaaaaagaaaa............................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-8 bit: 61.9 Len: 35 Query Start:278 Query End:312 Subject Strand: POSITIVE Subject Start: 197 Subject End: 231 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI2056_PI2057|conserved hypothetical protein:conserved hypothetical protein; possible metal-dependent membrane protease|POSITIVE:POSITIVE|[2014489,2015078]|590 HSP 1 e-value: 5.0E-22 bit: 107.0 Len: 141 Query Start:222 Query End:362 Subject Strand: NEGATIVE Subject Start: 341 Subject End: 482 .............................................................................................................................................................................................................................cagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt-tcaatgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................cagtgtattacaaaacctattgtttcgcattccaaaagcggctgttttgcatggtaaaagcgtaagttttgcattacaaaagagccgctttcgcaacgtcaaatcgaaattattgttttcttaacgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 2.0E-21 bit: 105.0 Len: 136 Query Start:228 Query End:363 Subject Strand: NEGATIVE Subject Start: 112 Subject End: 248 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatg-aattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaatcgaaattaccatttttcaaagaaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409 HSP 1 e-value: 8.0E-21 bit: 103.0 Len: 136 Query Start:167 Query End:302 Subject Strand: NEGATIVE Subject Start: 162 Subject End: 297 ......................................................................................................................................................................aatagaactgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaa....................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................aatagaagtgtaaatatttttcacaggcataactattgtgtaacttacttgttatcaacgcattgcaaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaa....................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 3.0E-20 bit: 101.0 Len: 134 Query Start:233 Query End:366 Subject Strand: POSITIVE Subject Start: 411 Subject End: 545 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttcaatg-aattatctttacaaaaccaa....................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggcaaaagcgtaggttttacctcgcaaaacagccgctttcgcaacgtcaaaacgaaattatcaattttcaatgtaattatctttacaaaaccaa....................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 1.0E-19 bit: 99.6 Len: 189 Query Start:175 Query End:363 Subject Strand: POSITIVE Subject Start: 40 Subject End: 229 ..............................................................................................................................................................................tgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ..............................................................................................................................................................................tgtaaatatttttcacaagcacacctatcgcataaccaccttactgtcagcgtattgcaaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaatgtcaaaacgcagttatcagtttttaacagaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:278 Query End:312 Subject Strand: NEGATIVE Subject Start: 143 Subject End: 177 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcaacgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 136 Query Start:233 Query End:368 Subject Strand: POSITIVE Subject Start: 332 Subject End: 468 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt-tcaatgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcatcctaaaagcggctgttttgcacggtaaaagcataggttttgcgttgcaaaagagctgctttcgcaacgtcaaatcgaaattatcgttttcttaacgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1803_PI1804|conserved hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1737852,1738248]|397 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 109 Query Start:232 Query End:340 Subject Strand: NEGATIVE Subject Start: 289 Subject End: 397 .......................................................................................................................................................................................................................................taaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttt................................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................................................................................................taaaacctattgttttgcattgtaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaatgccaaatcgaaattaccgtttt................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 136 Query Start:233 Query End:368 Subject Strand: NEGATIVE Subject Start: 85 Subject End: 221 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaatta-tcgtttttcaatgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcactccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgttttcgcaatgtcaaatcgaaattattactttttaaagaaattatctttacaaaagcaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 136 Query Start:233 Query End:368 Subject Strand: POSITIVE Subject Start: 41 Subject End: 177 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttca-atgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgtaaaagagccgctttcgcaacgtcaaaacgaaattattgtttttcatcagaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0051_PI0054|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[53449,54718]|1270 HSP 1 e-value: 5.0E-19 bit: 97.6 Len: 101 Query Start:233 Query End:333 Subject Strand: POSITIVE Subject Start: 88 Subject End: 188 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaatta........................................................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaatcgaaatta........................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 135 Query Start:228 Query End:362 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 246 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attataaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcagtttttaacagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 2.0E-18 bit: 95.6 Len: 100 Query Start:218 Query End:317 Subject Strand: NEGATIVE Subject Start: 237 Subject End: 336 .........................................................................................................................................................................................................................ttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaa........................................................................................................................................................................................................................................................................................................................................................................................ .........................................................................................................................................................................................................................ttgtcaatgcattacaaaatctattgttttgcgtcctaaaagcgtaggttttgcacggtaaaagcggctgttttgcatcgtaaaacagccgctttcgcaa........................................................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0694_PI0695|Na+/dicarboxylate or sulfate symporter:xanthine/uracil permease family protein|POSITIVE:POSITIVE|[631238,631552]|315 HSP 1 e-value: 8.0E-18 bit: 93.7 Len: 134 Query Start:233 Query End:366 Subject Strand: NEGATIVE Subject Start: 84 Subject End: 218 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc-aatgaattatctttacaaaaccaa....................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctcttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcagtgtcaaatcgaaattaccgttttccgtcggaattatctttacaaaaccaa....................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 3.0E-17 bit: 91.7 Len: 141 Query Start:221 Query End:361 Subject Strand: POSITIVE Subject Start: 243 Subject End: 384 ............................................................................................................................................................................................................................tcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ ............................................................................................................................................................................................................................tcagtgtgttacaaaacctattgttttgcgttccaaaagtggctgttttgcacggtaaaagcgtaggttttgcaacgcaaaacagccgctttcgcaatgtcaaaacgcagttatcactttttaagagaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 3.0E-8 bit: 61.9 Len: 35 Query Start:278 Query End:312 Subject Strand: NEGATIVE Subject Start: 300 Subject End: 334 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 136 Query Start:229 Query End:364 Subject Strand: POSITIVE Subject Start: 107 Subject End: 243 ....................................................................................................................................................................................................................................ttataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcg-tttttcaatgaattatctttacaaaacc......................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................ttataaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccgctttcgcaacgtcaaagcgcagttatcgctttttaacggaattatttttacaaaacc......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 1.0E-16 bit: 89.7 Len: 136 Query Start:228 Query End:363 Subject Strand: NEGATIVE Subject Start: 9 Subject End: 145 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc-aatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attacaaaacctattgttttgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaagagccactttcgcaacgtcaaatcgaaattatcatttttcttcggaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 5.0E-16 bit: 87.7 Len: 131 Query Start:233 Query End:363 Subject Strand: POSITIVE Subject Start: 97 Subject End: 228 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaagagccgctttcgcaatgccaaagcgcagttatcagtttttaacagaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1915_PI1916|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1859967,1860350]|384 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 115 Query Start:228 Query End:342 Subject Strand: NEGATIVE Subject Start: 135 Subject End: 249 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcgtttttc............................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagcggctgttttgcaacgtaaaacatacgcttttaccgtgcaaaacagccgctttcgcaatgccaaatcgaaattatcgtttttc............................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 130 Query Start:233 Query End:362 Subject Strand: POSITIVE Subject Start: 305 Subject End: 435 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagcggctgttttgcacggtaaaagcgtaggttttgcgttgcaaaacagccgctttcgcaacgtcaaagcgcagttatcactttttaagagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:278 Query End:312 Subject Strand: NEGATIVE Subject Start: 350 Subject End: 384 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcaacgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 134 Query Start:228 Query End:361 Subject Strand: NEGATIVE Subject Start: 480 Subject End: 614 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ ...................................................................................................................................................................................................................................attacaaaacctattgttttgcattccaaaagcggctgttttgcatggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgccaaagcgcagttatcactttttaacagaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 190 Query Start:174 Query End:363 Subject Strand: NEGATIVE Subject Start: 113 Subject End: 303 .............................................................................................................................................................................ctgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcg-tttttcaatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................ctgtaaatatttttcacaagcacaccaatcgtataacttactcgctgtcaatgcgttgcaaaacctattgttttgcattccaaaagcggctgttttgcacgctaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcgctttttaacagaataatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1937_PI1938|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1891147,1891993]|847 HSP 1 e-value: 8.0E-15 bit: 83.8 Len: 121 Query Start:237 Query End:357 Subject Strand: NEGATIVE Subject Start: 507 Subject End: 628 ............................................................................................................................................................................................................................................cctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatcg-tttttcaatgaattatcttta................................................................................................................................................................................................................................................................................................................................................ ............................................................................................................................................................................................................................................cctattgttttacgttctaaaagcgtaggttttgcaaggtaaaagcggctcttttggcgtgcaaaagttacgctttcgcaacgccaaagcgcagttatcgctttttaacagaattatcttta................................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 8.0E-15 bit: 83.8 Len: 133 Query Start:228 Query End:360 Subject Strand: NEGATIVE Subject Start: 170 Subject End: 303 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaa............................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................................attacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcaatgcaaaagagccgctttcgcaatgccaaagcgcagttatcactttttaacggaattatctttacaa............................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 3.0E-8 bit: 61.9 Len: 35 Query Start:278 Query End:312 Subject Strand: POSITIVE Subject Start: 219 Subject End: 253 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctcttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 136 Query Start:228 Query End:363 Subject Strand: NEGATIVE Subject Start: 165 Subject End: 301 ...................................................................................................................................................................................................................................attataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................attacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaacagccgctttcgcaatgtcaaaacgcagttatcaatttttaagagaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-6 bit: 54.0 Len: 35 Query Start:278 Query End:312 Subject Strand: POSITIVE Subject Start: 217 Subject End: 251 .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................................................................................................................................aaagcggctgttttgcgctgcaaaacctacgcttt............................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 1.0E-13 bit: 79.8 Len: 143 Query Start:221 Query End:363 Subject Strand: NEGATIVE Subject Start: 49 Subject End: 192 ............................................................................................................................................................................................................................tcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................tcagcgtattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgtcaaagcgcagttatcactttttaacggaattatctttacaaaac.......................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 133 Query Start:229 Query End:361 Subject Strand: NEGATIVE Subject Start: 200 Subject End: 333 ....................................................................................................................................................................................................................................ttataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ ....................................................................................................................................................................................................................................ttataaaacctattgttttgcgttccaaaaacggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaagcgcagttatcactttttaacggaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 7.0E-12 bit: 73.8 Len: 105 Query Start:220 Query End:324 Subject Strand: NEGATIVE Subject Start: 187 Subject End: 291 ...........................................................................................................................................................................................................................gtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaa................................................................................................................................................................................................................................................................................................................................................................................. ...........................................................................................................................................................................................................................gtcagtatgttacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaatgtcaaa................................................................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 7.0E-12 bit: 73.8 Len: 187 Query Start:175 Query End:361 Subject Strand: NEGATIVE Subject Start: 310 Subject End: 497 ..............................................................................................................................................................................tgtaaatatttttcacaagcacaactattgtgtaac-ctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ ..............................................................................................................................................................................tgtaaatatttttcacagacacacctattgtgtaattctcttg-ttatcaacgcattacaagacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaaagaaattatctttacaaa............................................................................................................................................................................................................................................................................................................................................ Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 1.0E-10 bit: 69.9 Len: 130 Query Start:233 Query End:362 Subject Strand: POSITIVE Subject Start: 152 Subject End: 282 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgttttacgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcatcgcaaaagagccgctttcgcaacgccaaagcgcagttatcactttttaagagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 4.0E-10 bit: 67.9 Len: 137 Query Start:226 Query End:362 Subject Strand: POSITIVE Subject Start: 88 Subject End: 225 .................................................................................................................................................................................................................................gtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................gtattacaaaacctattgttttgcgttccaaaagcggctcttttgcacggtaaaagcgtaggttttgcatcgtaaaagagccgctttcgcaacgtcaaagcgcagttatcagtttttaacagaattatctttacaaaa........................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1271_PI1272|transcriptional regulator, AraC/XylS family:possible transcriptional regulator|POSITIVE:POSITIVE|[1191345,1191841]|497 HSP 1 e-value: 2.0E-9 bit: 65.9 Len: 129 Query Start:174 Query End:302 Subject Strand: NEGATIVE Subject Start: 317 Subject End: 445 .............................................................................................................................................................................ctgtaaatatttttcacaagcacaactattgtgtaacctattgcttgtcagtgtattataaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaa....................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................ctgtaaatatttttcacaaacataactattgcataacttgttcgttatcagtgtattgcaaaacctacgcttttgcgttccaaaagcggctgttttgtacggtaaaagcgtaggttttgcatcgcaaaa....................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 4.0E-7 bit: 58.0 Len: 136 Query Start:233 Query End:368 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 315 ........................................................................................................................................................................................................................................aaaacctattgttttgcattccaaaagtgtaggttttgcacggtaaaagcggctgttttgcattgcaaaacctacgctttcgcaatgccaaatcgaaattatc-gtttttcaatgaattatctttacaaaaccaaag..................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................aaaacctattgtttcgcattgcaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcacaaaagagccgctttcgcaacgccaaagcgcagttatcaatttttaagagaattatctttacaaaaacaaag..................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAUCGCAGGUACAUAUAAAUAAAAGAAGUGGCAGAUGCUCGAUAAAAGCAUCUGCCACUUUUUGUUUCUUUCAAUCCGAUAGGACUAUUCUUACUUUCUUGUAUCAAUGGAAUGGAAUAGCAGGAAUUUAGCGGAACCUGUAUGUUUUAUAGGCAAGAAUAACCUAAUAGAACUGUAAAUAUUUUUCACAAGCACAACUAUUGUGUAACCUAUUGCUUGUCAGUGUAUUAUAAAACCUAUUGUUUUGCAUUCCAAAAGUGUAGGUUUUGCACGGUAAAAGCGGCUGUUUUGCAUUGCAAAACCUACGCUUUCGCAAUGCCAAAUCGAAAUUAUCGUUUUUCAAUGAAUUAUCUUUACAAAACCAAAGUAAUUUUGGGGUAUUUACCUUGAGCAAGAAAAAGAAAAUCAAUUCCCUUUGGUAAGUAUCGCUUCUCGCAUAGACACCACUGUCAAGCCCGAGCUUUUACGAUGUGUGGUAAUAGGAAGAAUGGCUGAUGGAAUAAACUUUCGUUUUUGACUACUAAUAAUUUUUAACCUCCUUUACUUUGGAAUAUCGGAAAUAAGGACUACCUUUGCAGCGUUCUAAUAAAGUAGUAAAAAAGAGGUAAUGGAAUUCUGACAUCGGGAUUAUGUCGGGAUUCUGUCUUUUUUAUAUUUAUUUUGAAAAGCGUAUAAACAAAAUAAUAUAGAUU .....(((((((...........(((((((((((((((((.......)))))))))))))))))...(((((...(((((((...(((((..(((......)))..)))))..(((.((.((.(((((...(((((((..(((.((((((((((((((((((........(((..((....))..)))....(((((.....)))))....)))).)))))).......)))))))).))).)))))))))))).(((((((((((((((((..((((((.......))))))..))))))))))))))))).)).)).)))....((((........))))....................(((((((((..(..((((....))))..).((((((...((((....(((((..(..((........(((((....((...(((((((((((((....))))....)))).)))))..)))))))....))..).)))))....)))).))))))........................)))))))))..)))))))...))))).))))..))).((.(((.((((((...((((((((((.....((((((((((((((.......)))))))))))))))))))))))).))))))..)))..))....................... (-182.91) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAUCUAUAUUAUUUUGUUUAUACGCUUUUCAAAAUAAAUAUAAAAAAGACAGAAUCCCGACAUAAUCCCGAUGUCAGAAUUCCAUUACCUCUUUUUUACUACUUUAUUAGAACGCUGCAAAGGUAGUCCUUAUUUCCGAUAUUCCAAAGUAAAGGAGGUUAAAAAUUAUUAGUAGUCAAAAACGAAAGUUUAUUCCAUCAGCCAUUCUUCCUAUUACCACACAUCGUAAAAGCUCGGGCUUGACAGUGGUGUCUAUGCGAGAAGCGAUACUUACCAAAGGGAAUUGAUUUUCUUUUUCUUGCUCAAGGUAAAUACCCCAAAAUUACUUUGGUUUUGUAAAGAUAAUUCAUUGAAAAACGAUAAUUUCGAUUUGGCAUUGCGAAAGCGUAGGUUUUGCAAUGCAAAACAGCCGCUUUUACCGUGCAAAACCUACACUUUUGGAAUGCAAAACAAUAGGUUUUAUAAUACACUGACAAGCAAUAGGUUACACAAUAGUUGUGCUUGUGAAAAAUAUUUACAGUUCUAUUAGGUUAUUCUUGCCUAUAAAACAUACAGGUUCCGCUAAAUUCCUGCUAUUCCAUUCCAUUGAUACAAGAAAGUAAGAAUAGUCCUAUCGGAUUGAAAGAAACAAAAAGUGGCAGAUGCUUUUAUCGAGCAUCUGCCACUUCUUUUAUUUAUAUGUACCUGCGAUUA ((((.........((((((...((.(((((((........(((((((((..((((.(.(((((.......))))).).)))).......)))))))))(((((((..(((....)))..)))))))...((((((...(((..(((((((((.((.(((...........(((((..(((((.(((((((.(((((.((((((.......((.((((........)))).))....))).)))...(((((..(((((.....)).)))..)))))...))))).)))))))))))).)))))..........)))))....)))))))))...)))..))))))....))))))).))..............(((((.((((((.((((((((((((....((((.......))))....)))))))))))).)))))).))))).)))))).((((..(((((.....(.(((((((....(((....))).....))))))).)..........((((((...((((((((((((((............((((............))))......((......))..........)))))))))).))))..))))))...........(((((((((((((((.....))))))))))))))).......)))))...))))..)))). (-168.90) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 885 300 251 195 146 pint:PI1437|5end_hypothetical_protein_1356088..1356318_POSITIVE 885 300 251 68 19 pint:PI1436|5end_hypothetical_protein_1355961..1356191_POSITIVE 885 300 251 177 128 pint:PI0211|5end_hypothetical_protein_204067..204297_POSITIVE 863 310 261 78 29 pint:PI1702|5end_hypothetical_protein_1620587..1620817_POSITIVE 859 290 241 186 137 pint:PI0196|5end_hypothetical_protein_188435..188665_POSITIVE 813 300 251 223 174 pint:PI0561|5end_hypothetical_protein_508952..509182_POSITIVE 804 290 241 120 71 pint:PI1371|5end_hypothetical_protein_1292359..1292589_POSITIVE 798 286 241 54 9 pint:PI0037|5end_hypothetical_protein_39354..39584_POSITIVE 792 300 251 54 5 pint:PI0659|5end_hypothetical_protein_603203..603433_POSITIVE 749 310 266 106 62 pint:PI1760|5end_hypothetical_protein_1684413..1684643_POSITIVE 737 270 221 185 136 pint:PI0653|5end_hypothetical_protein_596046..596276_POSITIVE 736 340 291 86 37 pint:PI0638|5end_hypothetical_protein_582218..582448_POSITIVE 709 310 261 78 29 pint:PI0926|5end_hypothetical_protein_856824..857054_POSITIVE 706 320 271 84 35 pint:PI1204|5end_hypothetical_protein_1124430..1124660_POSITIVE 688 340 293 48 1 pint:PI1182|5end_hypothetical_protein_1104025..1104255_POSITIVE 676 340 291 57 8 pint:PI2141|5end_hypothetical_protein_2087169..2087399_POSITIVE 656 280 231 181 132 pint:PI2046|5end_hypothetical_protein_1999030..1999260_POSITIVE 650 320 271 221 172 pint:PI0024|5end_hypothetical_protein_28378..28608_POSITIVE 646 340 291 200 151 pint:PI1804|5end_hypothetical_protein_1738109..1738339_POSITIVE 637 360 311 169 119 pint:PI0119|5end_hypothetical_protein_111506..111736_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 863 310 261 111 62 pint:PI0560|3end_hypothetical_protein_508910..509060_POSITIVE 798 286 241 109 64 pint:PI0905|3end_hypothetical_protein_834697..834847_POSITIVE 752 330 281 62 13 pint:PI1520|3end_hypothetical_protein_1441370..1441520_POSITIVE 743 320 272 143 95 pint:PI1521|3end_hypothetical_protein_1441461..1441611_POSITIVE 689 280 231 147 98 pint:PI0659|3end_hypothetical_protein_603396..603546_POSITIVE 656 280 231 130 81 pint:PI0815|3end_hypothetical_protein_754677..754827_POSITIVE 656 280 231 130 81 pint:PI0081|3end_hypothetical_protein_80700..80850_POSITIVE 643 280 232 130 82 pint:PI0095|3end_hypothetical_protein_91850..92000_POSITIVE 625 305 266 151 112 pint:PI1761|3end_hypothetical_protein_1684543..1684693_POSITIVE 611 280 231 147 98 pint:PI1294|3end_hypothetical_protein_1208716..1208866_POSITIVE 611 290 241 91 42 pint:PI0819|3end_hypothetical_protein_759919..760069_POSITIVE 602 289 241 151 103 pint:PI1797|3end_hypothetical_protein_1731559..1731709_POSITIVE 602 289 241 151 103 pint:PI0885|3end_hypothetical_protein_817563..817713_POSITIVE 602 289 241 151 103 pint:PI0866|3end_hypothetical_protein_803993..804143_POSITIVE 602 289 241 151 103 pint:PI0820|3end_hypothetical_protein_759980..760130_POSITIVE 602 289 241 151 103 pint:PI0089|3end_hypothetical_protein_88355..88505_POSITIVE 600 280 231 130 81 pint:PI0568|3end_hypothetical_protein_513131..513281_POSITIVE 600 280 231 54 5 pint:PI0567|3end_hypothetical_protein_513055..513205_POSITIVE 599 300 251 150 101 pint:PI0638|3end_hypothetical_protein_582402..582552_POSITIVE 599 300 251 145 96 pint:PI0637|3end_hypothetical_protein_582397..582547_POSITIVE