Origin IGS: taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 taaagcatatagtgtaagactaacgataaaggcgatacctttcaaaaggtgtcgcctttgttgttgctccaagttcaactaaccattatgccaattcggtataagaattacacttacatattattcattacaatacataaagaaagtattgtttatgatttaataggcttataatcaaaaagaagtgaagtgtcttcgtcctaaaatcttacacccatttcacgctatcttatgcacgaaaagaaggtaataaagatgtaaatatttttcacagataaaactatcgcttaaccatttggcattcagcgcattacaaaacctattgttttgcgttccaaaagcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaacagccgctttcgcaatgtcaaaacgcagttatcaatttttaagagaattatctttacaaaacgaaacaaaaaaaagctcactgtttcattagggagcttgctaaaagaatatctacaggattgcttgcctaacctgctttcttatgtcgaacttacataactattgagaaacaaaaaagcggctgctgcaccttatctgtacagcaaaccgccattctatttttta Mask Tandem Repeat Region ================================================ taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Find is-nt database================================================ Query_seq: PI0141:PI0142|PI0141:PI0142:glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein:->->:133369..133978 610 taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PI0141:PI0142|PI0141:PI0142:glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein:->->:133369..133978 610 taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PI0141:PI0142|PI0141:PI0142:glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein:->->:133369..133978 610 taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Predict ORF larger than 30AA ================================================ Protein_Len: 30 Strand: + Start: 199 End: 288 ...................................................................................................................................................................................................... M R F D I A K A A V L R C K T Y A F T V Q N S R F W N A K Q .................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 146 End: 388 ................................................................................................................................................. M S F F L F R F V K I I L L K I D N C V L T L R K R L F C A A K P T L L P C K T A A F G T Q N N R F C N A L N A K W L S .............................................................................................................................................................................................................................. Protein_Len: 41 Strand: - Start: 440 End: 562 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G I L D Y V I S E K H I T I F L I Y T Y N K Y R I P M I T L Q V Q L L L L P S M ................................................ Protein_Len: 34 Strand: - Start: 138 End: 239 ......................................................................................................................................... H F L S S K K T E N Q L S L E R L F Q Y S R K S M A F A A T K R Q M ................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 70 End: 336 ..................................................................... K N R K T F I I R K F I S L Q T K V N R F R S N Q A A F G V S K G H L V A A K P V C F L L N Q L A S F A L H N L S L K M .................................................................................................................................................................................................................................................................................. taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 100 HP_score: -20.6 Tail_Score: -4.07568 Start: 220 End: 270 Full_Region: TTTGACATTGCGAAA GCGGCTGTTTTGCGCTGCAAAACC TAC GCTTTTACCGTGCAAAACAGCCGC TTTTGGAACGCAAAA ...........................................................................................................................................................................................................................GCGGCTGTTTTGCGCTGCAAAACCTACGCTTTTACCGTGCAAAACAGCCGC.................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -20.6 Tail_Score: -3.59262 Start: 220 End: 270 Full_Region: ttttgcgttccaaaa gcggctgttttgcacggtaaaagc gta ggttttgcagcgcaaaacagccgc tttcgcaatgtcaaa ...........................................................................................................................................................................................................................gcggctgttttgcacggtaaaagcgtaggttttgcagcgcaaaacagccgc.................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 55 HP_score: -2.6 Tail_Score: -4.15841 Start: 460 End: 480 Full_Region: acatattattcatta caatacat aaaga aagtattg tttatgatttaatag ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................caatacataaagaaagtattg.................................................................................................................................. TransTerm Strand: - Conf: 100 HP_score: -17.4 Tail_Score: -3.16742 Start: 548 End: 587 Full_Region: atagtgtaagactaa cgataaaggcgatacctt tcaa aaggtgtcgcctttgttg ttgctccaagttcaa ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgataaaggcgatacctttcaaaaggtgtcgcctttgttg....................... TransTerm Strand: - Conf: 100 HP_score: -15.5 Tail_Score: -3.72592 Start: 551 End: 584 Full_Region: gtgtaagactaacga taaaggcgatacctt tcaa aaggtgtcgcctttg ttgttgctccaagtt ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................taaaggcgatacctttcaaaaggtgtcgcctttg.......................... TransTerm Strand: + Conf: 93 HP_score: -11.9 Tail_Score: -4.09818 Start: 555 End: 580 Full_Region: TGGAGCAACAACAAA GGCGACACCTT TTGA AAGGTATCGCC TTTATCGTTAGTCTT ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGACACCTTTTGAAAGGTATCGCC.............................. Find igs database================================================ Query_seq: PI0141:PI0142|PI0141:PI0142:glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein:->->:133369..133978 610 taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Intra-Species Hit: Count: 50 Min: 1 Max: 610 Len: 610 Subject: pint_PI0141_PI0142|glutamine amidotransferase involved in pyridoxine biosynthesis:DNA-binding protein|POSITIVE:POSITIVE|[133369,133978]|610 HSP 1 e-value: 0.0 bit: 1162.0 Len: 610 Query Start:1 Query End:610 Subject Strand: POSITIVE Subject Start: 1 Subject End: 610 taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcnnnnnnnngtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta taaaaaatagaatggcggtttgctgtacagataaggtgcagcagccgcttttttgtttctcaatagttatgtaagttcgacataagaaagcaggttaggcaagcaatcctgtagatattcttttagcaagctccctaatgaaacagtgagcttttttttgtttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtattgtaatgaataatatgtaagtgtaattcttataccgaattggcataatggttagttgaacttggagcaacaacaaaggcgacaccttttgaaaggtatcgcctttatcgttagtcttacactatatgcttta Subject: pint_PI2178_PI0001|1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, GcpE:possible Ton-B receptor|POSITIVE:POSITIVE|[1,539]|539 HSP 1 e-value: 3.0E-69 bit: 264.0 Len: 308 Query Start:166 Query End:473 Subject Strand: POSITIVE Subject Start: 111 Subject End: 416 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttcttta......................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttataatgcgttgatggttagatagttaagtaataattatctttacgaaaaatatttacacctttattaccttcttttcgttcattgcataacgtgaatttggtgtaagaactaa--acgaataaacttcacttctttttgattataagcatattgaattataatcaattctttcttta......................................................................................................................................... Subject: pint_PI1503_PI1504|30S ribosomal protein S15:non-specific DNA-binding protein|POSITIVE:POSITIVE|[1423841,1424457]|617 HSP 1 e-value: 1.0E-68 bit: 262.0 Len: 140 Query Start:162 Query End:301 Subject Strand: POSITIVE Subject Start: 142 Subject End: 281 .................................................................................................................................................................ttcgttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................ttcgttttgtaaagataattctcttaaaaaatgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0892_PI0893|acyl-ACP thioesterase:outer membrane protein 41 precursor|POSITIVE:POSITIVE|[824000,824552]|553 HSP 1 e-value: 1.0E-62 bit: 242.0 Len: 134 Query Start:167 Query End:300 Subject Strand: NEGATIVE Subject Start: 251 Subject End: 384 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................tttgtaaagataattctcttaaaaagtgataactgcgttttgacattgcgaaagcggctgttttgcgttgcaaaacctacgcttttaccgtgcaaaacagccacttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0412_PI0413|primosomal protein N', replication factor Y:outer membrane protein|POSITIVE:POSITIVE|[382213,382552]|340 HSP 1 e-value: 2.0E-58 bit: 228.0 Len: 139 Query Start:165 Query End:303 Subject Strand: NEGATIVE Subject Start: 90 Subject End: 228 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgc................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataattctgttaaaaactgataactgcgctttggcattgcgaaagcggctcttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgcaatgc................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1485_PI1486|hypothetical protein:alginate O-acetylation protein|POSITIVE:POSITIVE|[1405400,1405646]|247 HSP 1 e-value: 1.0E-56 bit: 222.0 Len: 144 Query Start:165 Query End:308 Subject Strand: NEGATIVE Subject Start: 86 Subject End: 229 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctga.............................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................gttttgtaaagataattctgttaaaaactgataactgcgttttgacattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgcaatacgctga.............................................................................................................................................................................................................................................................................................................. Subject: pint_PI0010_PI0011|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[11740,12281]|542 HSP 1 e-value: 1.0E-56 bit: 222.0 Len: 144 Query Start:165 Query End:308 Subject Strand: POSITIVE Subject Start: 49 Subject End: 192 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctga.............................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................gttttgtaaagataattccgttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatacgctga.............................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-10 bit: 67.9 Len: 141 Query Start:338 Query End:478 Subject Strand: POSITIVE Subject Start: 222 Subject End: 360 .................................................................................................................................................................................................................................................................................................................................................tgtgaaaaatatttacatctttattaccttcttttcgtgcataagatagcgtgaaatgggtgtaagattttaggacgaagacacttcacttctttttgattataagcctattaaatcataaacaatactttctttatgtat.................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................tgtgaaaaatatttacacttttattagcttctttttattcatggaatagcgtgaatttggtgtaagaactt--gccgaagaaacttcacttctttctcattataagcatatcgaatcgtaatcaattctttctttaagtat.................................................................................................................................... Subject: pint_PI2172_PI2174|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2114052,2114384]|333 HSP 1 e-value: 2.0E-55 bit: 218.0 Len: 210 Query Start:166 Query End:375 Subject Strand: NEGATIVE Subject Start: 16 Subject End: 225 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgt........................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataattctgttaaaaactgataactgcgctttgacgttgcgaaagcggctcttttacgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaacgcaaaacaataggttttgtaatacgttgatgattagatagttaagcaatagatatatgtgcgaaaaatatttacacatttattactttcttttcgt........................................................................................................................................................................................................................................... Subject: pint_PI0990_PI0991|GDP-mannose 4,6-dehydratase:conserved hypothetical protein|POSITIVE:POSITIVE|[915115,915448]|334 HSP 1 e-value: 7.0E-55 bit: 216.0 Len: 141 Query Start:168 Query End:308 Subject Strand: POSITIVE Subject Start: 170 Subject End: 310 .......................................................................................................................................................................ttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctga.............................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................................ttgtaaagataattccgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcattgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctga.............................................................................................................................................................................................................................................................................................................. Subject: pint_PI2045_PI2046|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1998784,1999169]|386 HSP 1 e-value: 1.0E-53 bit: 212.0 Len: 135 Query Start:167 Query End:301 Subject Strand: POSITIVE Subject Start: 215 Subject End: 349 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................tttgtaaagattattctcttaaaaagtgataactgcgttttgacgatgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1878_PI1879|hypothetical protein:uracil phosphoribosyltransferase|POSITIVE:POSITIVE|[1820222, 1820810]|589 HSP 1 e-value: 1.0E-53 bit: 212.0 Len: 135 Query Start:166 Query End:300 Subject Strand: NEGATIVE Subject Start: 148 Subject End: 282 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgtaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1499_PI1500|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1420241,1420765]|525 HSP 1 e-value: 4.0E-53 bit: 210.0 Len: 134 Query Start:167 Query End:300 Subject Strand: POSITIVE Subject Start: 149 Subject End: 282 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................tttgtaaagataattccgttaaaaagtgataaccgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0780_PI0781|DNA gyrase, subunit A (DNA topoisomerase (ATP-hydrolyzing)):UDP-glucose/GDP-mannose dehydrogenase family; probable UDP-glucose 6-dehydrogenase|POSITIVE:POSITIVE|[718574,719399]|826 HSP 1 e-value: 4.0E-53 bit: 210.0 Len: 138 Query Start:167 Query End:304 Subject Strand: POSITIVE Subject Start: 480 Subject End: 617 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................tttgtaaagataattctgttaaaaagtgataactgcgctttggcattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccatgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0787_PI0788|glycosyltransferase:3-methyladenine DNA glycosylase (DNA-3-methyladenine glycosylase I)|POSITIVE:POSITIVE|[725854,726291]|438 HSP 1 e-value: 7.0E-52 bit: 206.0 Len: 132 Query Start:166 Query End:297 Subject Strand: NEGATIVE Subject Start: 304 Subject End: 435 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttgacgttgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0794_PI0796|long-chain-fatty-acid--CoA ligase:competence protein|POSITIVE:POSITIVE|[732926,733463]|538 HSP 1 e-value: 3.0E-51 bit: 204.0 Len: 135 Query Start:166 Query End:300 Subject Strand: POSITIVE Subject Start: 185 Subject End: 319 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgctttggcgttgcgaaagcggctcttttgtgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcgaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1494_PI1495|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1414029,1414571]|543 HSP 1 e-value: 1.0E-50 bit: 202.0 Len: 130 Query Start:167 Query End:296 Subject Strand: POSITIVE Subject Start: 200 Subject End: 329 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................tttgtaaagataattccgttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgtttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 44 Query Start:82 Query End:125 Subject Strand: POSITIVE Subject Start: 102 Subject End: 145 .................................................................................ataagaaagcaggttaggcaagcaatcctgtagatattctttta..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................ataagaaagcaagttaaacaagcaatcctatagatattctttta..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1563_PI1564|thiol:disulfide interchange protein dsbD:surface antigen BspA|POSITIVE:POSITIVE|[1482876,1483594]|719 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 138 Query Start:167 Query End:304 Subject Strand: NEGATIVE Subject Start: 379 Subject End: 516 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................tttgtaaagataattctgatgaaaaatgataatttcgatttggcattgcgaaagcggctgttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1379_PI1380|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1302353,1302726]|374 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 134 Query Start:167 Query End:300 Subject Strand: POSITIVE Subject Start: 60 Subject End: 193 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................tttgtaaagataattctgttaaaaagtgacaactgcgctttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttagaatgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1029_PI1030|seryl-tRNA synthetase:biotin carboxyl carrier protein|POSITIVE:POSITIVE|[947266,947985]|720 HSP 1 e-value: 3.0E-48 bit: 194.0 Len: 138 Query Start:167 Query End:304 Subject Strand: POSITIVE Subject Start: 310 Subject End: 447 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. ......................................................................................................................................................................tttgtaaagataatttctttaaaaagtgataactgcgctttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtcttgtaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0680_PI0682|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[618694,619111]|418 HSP 1 e-value: 1.0E-47 bit: 192.0 Len: 133 Query Start:165 Query End:297 Subject Strand: POSITIVE Subject Start: 113 Subject End: 245 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagattattctgttaaaaagcgataactgcgctttgacattgcgaaagcggctcttttgcgatgcaaaacctacgcttttagcgtgcaaaacagccgcttttggaatgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1930_PI1931|conserved hypothetical protein; possible ankyrin repeat protein (eukaryotic-like):alpha glycan phosphorylase, maltodextrin phosphorylase|POSITIVE:POSITIVE|[1875115,1875595]|481 HSP 1 e-value: 1.0E-44 bit: 182.0 Len: 140 Query Start:165 Query End:304 Subject Strand: POSITIVE Subject Start: 112 Subject End: 251 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................gttttgtaaagataatttctttgaaaaatggtaatttcgatttgacgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI2029_PI2030|DNA topoisomerase I:hypothetical protein|POSITIVE:POSITIVE|[1985315,1985740]|426 HSP 1 e-value: 2.0E-43 bit: 178.0 Len: 138 Query Start:166 Query End:303 Subject Strand: POSITIVE Subject Start: 141 Subject End: 278 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgc................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataattctcttaaaaagtgataactgcgctttgacattgcgaaagcggctcttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggttttataatgc................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-6 bit: 54.0 Len: 35 Query Start:338 Query End:372 Subject Strand: POSITIVE Subject Start: 313 Subject End: 347 .................................................................................................................................................................................................................................................................................................................................................tgtgaaaaatatttacatctttattaccttctttt.............................................................................................................................................................................................................................................. .................................................................................................................................................................................................................................................................................................................................................tgtgaaaaatatttacacctttattgccttctttt.............................................................................................................................................................................................................................................. Subject: pint_PI1583_PI1584|phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR)/IMP cyclohydrolase (ATIC):A/G-specific adenine glycosylase|POSITIVE:POSITIVE|[1511261,1512037]|777 HSP 1 e-value: 2.0E-42 bit: 174.0 Len: 136 Query Start:165 Query End:300 Subject Strand: NEGATIVE Subject Start: 407 Subject End: 542 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataattacattgaaaattgataatttcgttttgacgttgcgaaagcggctgttttgcgaggtaaaacctacgcttttgccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1408_PI1409|glucose-1-phosphate thymidylyltransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1329822,1330988]|1167 HSP 1 e-value: 9.0E-42 bit: 172.0 Len: 143 Query Start:166 Query End:308 Subject Strand: NEGATIVE Subject Start: 685 Subject End: 827 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctga.............................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................ttttgtaaaaataattctgttaaaaagtgataactgtactttggcgttgcgaaagcggctcttttgcgatgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatacaaaacaataggttttgtaatgagctga.............................................................................................................................................................................................................................................................................................................. Subject: pint_PI1174_PI1175|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1097103,1097511]|409 HSP 1 e-value: 9.0E-42 bit: 172.0 Len: 135 Query Start:170 Query End:304 Subject Strand: POSITIVE Subject Start: 105 Subject End: 239 .........................................................................................................................................................................gtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. .........................................................................................................................................................................gtaaagatattttccttaaaaagtgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttgcaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0770_PI0771|hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[706415,706663]|249 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 132 Query Start:165 Query End:296 Subject Strand: NEGATIVE Subject Start: 111 Subject End: 242 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaaaataattccgttaaaaagcgataactgcgctttgacgttgcgaaagcggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0210_PI0211|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[203859,204206]|348 HSP 1 e-value: 6.0E-40 bit: 167.0 Len: 140 Query Start:165 Query End:304 Subject Strand: POSITIVE Subject Start: 200 Subject End: 338 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................gttttgtaaagataattctcttaaaaagtgataactgcgctttggcgttgcgaaagcggctg-tttgcgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1271_PI1272|transcriptional regulator, AraC/XylS family:possible transcriptional regulator|POSITIVE:POSITIVE|[1191345,1191841]|497 HSP 1 e-value: 2.0E-39 bit: 165.0 Len: 215 Query Start:167 Query End:381 Subject Strand: POSITIVE Subject Start: 257 Subject End: 471 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttacatctttattaccttcttttcgtgcataa..................................................................................................................................................................................................................................... ......................................................................................................................................................................tttgtaaatataattccgttaaaaagtgataactgcgctttaacgttgcgaaagcggttcttttgcgatgcaaaacctacgcttttaccgtacaaaacagccgcttttggaacgcaaaagcgtaggttttgcaatacactgataacgaacaagttatgcaatagttatgtttgtgaaaaatatttacagcttgattatcttcttttcgttcataa..................................................................................................................................................................................................................................... Subject: pint_PI1332_PI1333|aminotransferase, possible pyridoxal-phosphate-dependent aminotransferase:conserved hypothetical protein|POSITIVE:POSITIVE|[1250627,1250916]|290 HSP 1 e-value: 3.0E-35 bit: 151.0 Len: 132 Query Start:166 Query End:297 Subject Strand: POSITIVE Subject Start: 91 Subject End: 222 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataatttctttaaaaagtaataatttcgatttgacattgcgaaaacggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggagtgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2088_PI2089|conserved hypothetical protein; possible PAP2 superfamily protein:conserved hypothetical protein|POSITIVE:POSITIVE|[2045876,2046339]|464 HSP 1 e-value: 5.0E-34 bit: 147.0 Len: 138 Query Start:166 Query End:303 Subject Strand: POSITIVE Subject Start: 155 Subject End: 292 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgc................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataattcgttaagaaaacgataatttcgatttgacgttgcgaaagctgctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggttttataatgc................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0023_PI0024|internalin-related protein:hypothetical protein|POSITIVE:POSITIVE|[28131,28517]|387 HSP 1 e-value: 2.0E-33 bit: 145.0 Len: 132 Query Start:165 Query End:296 Subject Strand: POSITIVE Subject Start: 214 Subject End: 345 ....................................................................................................................................................................gttttgtaaagataatt-ctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataatttcgctgaaaaac-gataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaatgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1051_PI1052|hypothetical protein:fructose-1, 6-bisphosphatase|POSITIVE:POSITIVE|[970289,970631]|343 HSP 1 e-value: 8.0E-33 bit: 143.0 Len: 136 Query Start:165 Query End:300 Subject Strand: NEGATIVE Subject Start: 37 Subject End: 172 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataattctgatgaaaaacaataatttcgttttgacgttgcgaaagcggctcttttacaacgcaaaacctacgcttttaccgtgcaaaagagccgcttttggaatgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0574_PI0575|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[519505,519700]|196 HSP 1 e-value: 8.0E-33 bit: 143.0 Len: 140 Query Start:165 Query End:304 Subject Strand: POSITIVE Subject Start: 9 Subject End: 148 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................gttttgtaaagataattccgaagaaaaatgataatttcgatttgacgttgcgaaagtggctcttttgcaacgcaaaacctacgcttttaccgtgcaaaacagccgcttttgcaatgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1360_PI1361|conserved hypothetical protein:CTP synthase (UTP-ammonia lyase)|POSITIVE:POSITIVE|[1277656,1278384]|729 HSP 1 e-value: 3.0E-29 bit: 131.0 Len: 138 Query Start:166 Query End:303 Subject Strand: POSITIVE Subject Start: 191 Subject End: 328 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgc................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataatttcgttaaaaagtgataactgcactttgacgttgcgaaagcggctgttttacgatgcaaaacagccgcttttaccgtgcaaaacctacgcttttaggacgcaaaacaatagattttgtaatgc................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1909_PI1910|DNA gyrase, B subunit:hypothetical protein|POSITIVE:POSITIVE|[1855331,1855917]|587 HSP 1 e-value: 2.0E-27 bit: 125.0 Len: 139 Query Start:166 Query End:304 Subject Strand: NEGATIVE Subject Start: 339 Subject End: 477 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcg.................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................ttttgtaaagataacattgttaaaaagtgataactgcgctttgacattgcgaaagcgtaggttttgcgatgcaaaagcgccacttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgcaatgcg.................................................................................................................................................................................................................................................................................................................. Subject: pint_PI0831_PI0832|hypothetical protein:sigma-54-dependent transcriptional regulator|POSITIVE:POSITIVE|[768509,768973]|465 HSP 1 e-value: 8.0E-27 bit: 123.0 Len: 130 Query Start:167 Query End:296 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 308 ......................................................................................................................................................................tttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................tttgtaaagataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-6 bit: 54.0 Len: 35 Query Start:217 Query End:251 Subject Strand: POSITIVE Subject Start: 224 Subject End: 258 ........................................................................................................................................................................................................................aaagcggctgttttgcgctgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1090_PI1091|tRNA uracil 5-methyltransferase:transcriptional regulator, AsnC family|POSITIVE:POSITIVE|[1015841,1016319]|479 HSP 1 e-value: 3.0E-26 bit: 121.0 Len: 129 Query Start:168 Query End:296 Subject Strand: POSITIVE Subject Start: 113 Subject End: 241 .......................................................................................................................................................................ttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................ttgtaaaaataattccgttaaaaagtgataactgccttttgacattgcaaaagcagctgttttacgatgcaaaacaaccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0945_PI0946|sodium:solute symporter family protein:glutathione peroxidase|POSITIVE:POSITIVE|[877685,878112]|428 HSP 1 e-value: 3.0E-26 bit: 121.0 Len: 137 Query Start:166 Query End:302 Subject Strand: POSITIVE Subject Start: 79 Subject End: 215 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatg.................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................ttttgtaaagataatttcgttgaaaagtggtaattgcgctttggcattgcgaaagcggctgttttgcgatgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaatg.................................................................................................................................................................................................................................................................................................................... Subject: pint_PI2051_PI2052|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[2007896,2008733]|838 HSP 1 e-value: 1.0E-25 bit: 119.0 Len: 136 Query Start:165 Query End:300 Subject Strand: NEGATIVE Subject Start: 328 Subject End: 463 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataattcgttaagaaaacgataatttcgatttgacgttgcgaaagcagctcttttgcaacgcaaaacctatgcttttaccgtgcaaaacagccgcttttaggatgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1044_PI1045|excinuclease ABC, subunit A:cytidine/deoxycytidylate deaminase family protein|POSITIVE:POSITIVE|[964700,965243]|544 HSP 1 e-value: 7.0E-24 bit: 113.0 Len: 133 Query Start:169 Query End:301 Subject Strand: POSITIVE Subject Start: 190 Subject End: 322 ........................................................................................................................................................................tgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................tgtaaaaataattccgttaaaaagtaataactgcgctttgacattgcgaaagtggctgttttgcaacgcaaaacagccgcttttatcgtgtaaaacctacgcttttggaatgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0962_PI0963|phosphoglycerate mutase:hypothetical protein|POSITIVE:POSITIVE|[892763,893337]|575 HSP 1 e-value: 7.0E-24 bit: 113.0 Len: 133 Query Start:165 Query End:297 Subject Strand: POSITIVE Subject Start: 143 Subject End: 275 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataattcgttgaaaaaatgataatttcgatttgacattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttg......................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 56.0 Len: 44 Query Start:338 Query End:381 Subject Strand: POSITIVE Subject Start: 316 Subject End: 359 .................................................................................................................................................................................................................................................................................................................................................tgtgaaaaatatttacatctttattaccttcttttcgtgcataa..................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................tgtgaaaaatatttacacttttattatcttcttttcgttcataa..................................................................................................................................................................................................................................... Subject: pint_PI0195_PI0196|epimerase/reductase:hypothetical protein|POSITIVE:POSITIVE|[188263,188574]|312 HSP 1 e-value: 1.0E-22 bit: 109.0 Len: 103 Query Start:205 Query End:307 Subject Strand: POSITIVE Subject Start: 184 Subject End: 286 ............................................................................................................................................................................................................tttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctg............................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................tttggcattgcgaaagcggctgttttgcatcgcaaaacagccgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttgtaatacgctg............................................................................................................................................................................................................................................................................................................... Subject: pint_PI0932_PI0933|conserved hypothetical protein; possible hemin receptor:hypothetical protein|POSITIVE:POSITIVE|[865425,865839]|415 HSP 1 e-value: 7.0E-21 bit: 103.0 Len: 132 Query Start:165 Query End:296 Subject Strand: NEGATIVE Subject Start: 179 Subject End: 310 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataattttattaaaaagtggcaattgcgttttgacattgcaaaagcgtaggttttgcaatgcaaaagagccgcttttaccgtgcaaaacctacgcttttggaacgcgaaacaataggtttt.......................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0874_PI0875|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[810342,810747]|406 HSP 1 e-value: 7.0E-21 bit: 103.0 Len: 124 Query Start:165 Query End:288 Subject Strand: NEGATIVE Subject Start: 199 Subject End: 322 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaa.................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................gttttgtaaagataattcccttaaaaaaggataactgcgctttggcattgcgaaagcgtaggttttgcgttgcaaaagagccgcttttaccgtgtaaaacctacgcttttggaatgcaaaacaa.................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1588_PI1589|DNA polymerase III, epsilon chain:conserved hypothetical protein|POSITIVE:POSITIVE|[1516991,1517497]|507 HSP 1 e-value: 3.0E-20 bit: 101.0 Len: 123 Query Start:166 Query End:288 Subject Strand: POSITIVE Subject Start: 226 Subject End: 348 .....................................................................................................................................................................ttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaa.................................................................................................................................................................................................................................................................................................................................. .....................................................................................................................................................................ttttgtaaaaataattccgttaaaaagtgacaactgcgctttgacgttgcgaaagcgtaggttttgcacgccaaaagcggctcttttaccttgcaaaacagccgcttttggaacgcaaaacaa.................................................................................................................................................................................................................................................................................................................................. Subject: pint_PI1424_PI1425|probable peptidase family M48:conserved hypothetical protein|POSITIVE:POSITIVE|[1344105,1344627]|523 HSP 1 e-value: 2.0E-15 bit: 85.7 Len: 115 Query Start:188 Query End:302 Subject Strand: NEGATIVE Subject Start: 101 Subject End: 215 ...........................................................................................................................................................................................aaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatg.................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................aaaaatgataatttcgatttggcattgcgaaagcggctgttttgcaacgcaaaacagccgcttttgccgtgtaaaacctacgcttttggaatgcaaaacaataggttttgcaatg.................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0145_PI0146|secDF export membrane protein:transcription elongation factor|POSITIVE:POSITIVE|[139785,140477]|693 HSP 1 e-value: 3.0E-14 bit: 81.8 Len: 137 Query Start:165 Query End:301 Subject Strand: NEGATIVE Subject Start: 228 Subject End: 363 ....................................................................................................................................................................gttttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................gttttgtaaagataattcattgaaaaac-gataatttcgatttggcattgcgaaagcgtaggttttgcaatgcaaaacagccgcttttaccgtgcaaaacctacacttttggaatgcaaaacaataggttttataat..................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-6 bit: 54.0 Len: 35 Query Start:217 Query End:251 Subject Strand: POSITIVE Subject Start: 278 Subject End: 312 ........................................................................................................................................................................................................................aaagcggctgttttgcgctgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................aaagcggctgttttgcattgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1324_PI1325|conserved hypothetical protein:conserved hypothetical protein|POSITIVE:POSITIVE|[1243086,1243554]|469 HSP 1 e-value: 2.0E-12 bit: 75.8 Len: 134 Query Start:168 Query End:301 Subject Strand: NEGATIVE Subject Start: 257 Subject End: 390 .......................................................................................................................................................................ttgtaaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................ttgtaaaaataattctgttaaaaagtgataactgcactttggcattgtaaaagcggctgttttgcatcgcaaaacagccgcttttggctggtaaaagagccgcttttacaatgtaaaacaataggttttgtaat..................................................................................................................................................................................................................................................................................................................... Subject: pint_PI0854_PI0855|MiaB-like tRNA modifying enzyme:hypothetical protein|POSITIVE:POSITIVE|[788060,789233]|1174 HSP 1 e-value: 6.0E-12 bit: 73.8 Len: 109 Query Start:246 Query End:354 Subject Strand: POSITIVE Subject Start: 821 Subject End: 929 .....................................................................................................................................................................................................................................................cgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaatgcgctgaatgccaaatggttaagcgatagttttatctgtgaaaaatatttaca................................................................................................................................................................................................................................................................ .....................................................................................................................................................................................................................................................cgcttttaccgtgcaaaacctacgcttttggaatgcaaaacaataggttttataatatgttgataaacagaaagttatgcgatagttgcatctgtgaaaaatatttaca................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-8 bit: 61.9 Len: 35 Query Start:217 Query End:251 Subject Strand: NEGATIVE Subject Start: 792 Subject End: 826 ........................................................................................................................................................................................................................aaagcggctgttttgcgctgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................aaagcggctgttttgcgttgcaaaacctacgcttt....................................................................................................................................................................................................................................................................................................................................................................... Subject: pint_PI1937_PI1938|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1891147,1891993]|847 HSP 1 e-value: 4.0E-10 bit: 67.9 Len: 130 Query Start:171 Query End:300 Subject Strand: POSITIVE Subject Start: 507 Subject End: 636 ..........................................................................................................................................................................taaagataattctcttaaaaattgataactgcgttttgacattgcgaaagcggctgttttgcgctgcaaaacctacgcttttaccgtgcaaaacagccgcttttggaacgcaaaacaataggttttgtaa...................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................................................taaagataattctgttaaaaagcgataactgcgctttggcgttgcgaaagcgtaacttttgcacgccaaaagagccgcttttaccttgcaaaacctacgcttttagaacgtaaaacaataggctttgtaa...................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAAAAAUAGAAUGGCGGUUUGCUGUACAGAUAAGGUGCAGCAGCCGCUUUUUUGUUUCUCAAUAGUUAUGUAAGUUCGACAUAAGAAAGCAGGUUAGGCAAGCAAUCCUGUAGAUAUUCUUUUAGCAAGCUCCCUAAUGAAACAGUGAGCUUUUUUUUGUUUCGUUUUGUAAAGAUAAUUCUCUUAAAAAUUGAUAACUGCGUUUUGACAUUGCGAAAGCGGCUGUUUUGCGCUGCAAAACCUACGCUUUUACCGUGCAAAACAGCCGCUUUUGGAACGCAAAACAAUAGGUUUUGUAAUGCGCUGAAUGCCAAAUGGUUAAGCGAUAGUUUUAUCUGUGAAAAAUAUUUACAUCUUUAUUACCUUCUUUUCGUGCAUAAGAUAGCGUGAAAUGGGUGUAAGAUUUUAGGACGAAGACACUUCACUUCUUUUUGAUUAUAAGCCUAUUAAAUCAUAAACAAUACUUUCUUUAUGUAUUGUAAUGAAUAAUAUGUAAGUGUAAUUCUUAUACCGAAUUGGCAUAAUGGUUAGUUGAACUUGGAGCAACAACAAAGGCGACACCUUUUGAAAGGUAUCGCCUUUAUCGUUAGUCUUACACUAUAUGCUUUA ....((((((((.(((((((.(((((((.......)))))))))))))).)))))))).(((((.(((((((.((((((..(((((((.((((((.((((..((((.(((((.((...(((((..((((.......((((((((((...........)))))))))))))))))))....))....................((((((.(.((.((((((((((((((((((((.(.((((.......)))).).)))))))))))))))))))).)).))))))).)))))..))))....((((....(((....)))..))))...)))).)))))).....((((((((.((((...(((((...((((((((........)))))))).))))).))))..((((((.((((........)))).)))))).........(((((..((((..(((((((.........))))))).)))).))))).))))))))..)))))))..)))))).))))))).....)))))...(((((((.....((((((((.(((((....))))).)))))))).....((((.....))))..))))))) (-182.01) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAAGCAUAUAGUGUAAGACUAACGAUAAAGGCGAUACCUUUCAAAAGGUGUCGCCUUUGUUGUUGCUCCAAGUUCAACUAACCAUUAUGCCAAUUCGGUAUAAGAAUUACACUUACAUAUUAUUCAUUACAAUACAUAAAGAAAGUAUUGUUUAUGAUUUAAUAGGCUUAUAAUCAAAAAGAAGUGAAGUGUCUUCGUCCUAAAAUCUUACACCCAUUUCACGCUAUCUUAUGCACGAAAAGAAGGUAAUAAAGAUGUAAAUAUUUUUCACAGAUAAAACUAUCGCUUAACCAUUUGGCAUUCAGCGCAUUACAAAACCUAUUGUUUUGCGUUCCAAAAGCGGCUGUUUUGCACGGUAAAAGCGUAGGUUUUGCAGCGCAAAACAGCCGCUUUCGCAAUGUCAAAACGCAGUUAUCAAUUUUUAAGAGAAUUAUCUUUACAAAACGAAACAAAAAAAAGCUCACUGUUUCAUUAGGGAGCUUGCUAAAAGAAUAUCUACAGGAUUGCUUGCCUAACCUGCUUUCUUAUGUCGAACUUACAUAACUAUUGAGAAACAAAAAAGCGGCUGCUGCACCUUAUCUGUACAGCAAACCGCCAUUCUAUUUUUUA ..((((....(((((((((.(((((((((((((((((((((....))))))))))))))))))))).))................(((((((.....)))))))...)))))))....(((((.((((.(((((((.........)))))))..))))..))))).))))....((((.((((.((((((((.......................))))))))....)))).....(((.(((((((((.......((((((.((..(((...((((....)))).........(((((((((.((((((..((((......))))..))))))...((((((((((((((((.(.((((((.(...).)))))).).))))))))))))))))...)))))))))......................)))..)).))))))....((((((.............)))))).(((((((((...((...((.....))...))...)))).)))))..)))))))))...)))..............))))...........((((.(((((.((.......)).)))))..)))).............. (-165.02) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1022 270 221 122 73 pint:PI0055|5end_hypothetical_protein_54815..55045_POSITIVE 943 270 221 73 24 pint:PI1346|5end_hypothetical_protein_1260814..1261044_POSITIVE 917 280 231 55 6 pint:PI0061|5end_hypothetical_protein_60500..60730_POSITIVE 917 280 231 55 6 pint:PI0004|5end_hypothetical_protein_6199..6429_POSITIVE 914 290 241 93 44 pint:PI2153|5end_hypothetical_protein_2099392..2099622_POSITIVE 914 290 241 50 1 pint:PI1905|5end_hypothetical_protein_1847628..1847858_POSITIVE 914 270 221 81 32 pint:PI1168|5end_hypothetical_protein_1089696..1089926_POSITIVE 914 270 221 73 24 pint:PI1167|5end_hypothetical_protein_1089688..1089918_POSITIVE 913 260 211 63 14 pint:PI1934|5end_hypothetical_protein_1882363..1882593_POSITIVE 885 270 221 199 150 pint:PI0788|5end_3-methyladenine_DNA_glycosylase_(DNA-3-methyladenine_glycosylase_I)_726152..726382_POSITIVE 873 270 221 73 24 pint:PI1694|5end_hypothetical_protein_1609717..1609947_POSITIVE 871 270 221 73 24 pint:PI2002|5end_hypothetical_protein_1960662..1960892_POSITIVE 871 270 221 56 7 pint:PI1528|5end_hypothetical_protein_1449685..1449915_POSITIVE 871 270 221 61 12 pint:PI1129|5end_hypothetical_protein_1055377..1055607_POSITIVE 862 290 241 54 5 pint:PI0099|5end_hypothetical_protein_95530..95760_POSITIVE 856 270 221 73 24 pint:PI1567|5end_hypothetical_protein_1489229..1489459_POSITIVE 855 260 211 205 156 pint:PI1486|5end_alginate_O-acetylation_protein_1405507..1405737_POSITIVE 842 290 241 54 5 pint:PI1057|5end_hypothetical_protein_977286..977516_POSITIVE 838 290 241 54 5 pint:PI1339|5end_hypothetical_protein_1256671..1256901_POSITIVE 838 290 241 224 175 pint:PI0771|5end_conserved_hypothetical_protein_706524..706754_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1022 270 221 56 7 pint:PI0054|3end_hypothetical_protein_54829..54979_POSITIVE 996 280 231 125 76 pint:PI1141|3end_hypothetical_protein_1069713..1069863_POSITIVE 913 260 211 145 96 pint:PI1340|3end_hypothetical_protein_1256872..1257022_POSITIVE 900 260 212 149 101 pint:PI1922|3end_hypothetical_protein_1865454..1865604_POSITIVE 888 280 231 125 76 pint:PI0759|3end_hypothetical_protein_693998..694148_POSITIVE 871 270 221 56 7 pint:PI0996|3end_hypothetical_protein_920660..920810_POSITIVE 865 290 243 48 1 pint:PI0688|3end_hypothetical_protein_625750..625900_POSITIVE 858 300 251 52 3 pint:PI0669|3end_hypothetical_protein_611147..611297_POSITIVE 841 260 211 145 96 pint:PI0061|3end_hypothetical_protein_60690..60840_POSITIVE 832 260 211 145 96 pint:PI0004|3end_hypothetical_protein_6389..6539_POSITIVE 801 260 211 145 96 pint:PI0158|3end_hypothetical_protein_151298..151448_POSITIVE 789 260 212 145 97 pint:PI0689|3end_hypothetical_protein_625877..626027_POSITIVE 789 290 243 48 1 pint:PI0186|3end_hypothetical_protein_178003..178153_POSITIVE 783 260 211 145 96 pint:PI1814|3end_hypothetical_protein_1753233..1753383_POSITIVE 781 250 203 149 102 pint:PI1528|3end_hypothetical_protein_1449878..1450028_POSITIVE 767 260 211 139 90 pint:PI0182|3end_hypothetical_protein_174277..174427_POSITIVE 761 260 211 145 96 pint:PI0670|3end_hypothetical_protein_611280..611430_POSITIVE 742 260 212 119 71 pint:PI1356|3end_hypothetical_protein_1273340..1273490_POSITIVE 720 250 201 145 96 pint:PI1601|3end_hypothetical_protein_1530454..1530604_POSITIVE 714 300 251 54 5 pint:PI1051|3end_hypothetical_protein_970228..970378_POSITIVE