Origin IGS: ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 ttgtcctttatcatactgatgaacgtaccctacaactcctaaatagccaacaatagcgacaaccgccgttttcagtgcaaattttttcataattgtcctccaacacttaaaagtaaaaacgaagaagggattatcggttaaatataagaggaaacatatgatttaaatcaataaattcaatttgaaaaaacaatggatgaaatagattttagtaattaaatatctatttagagcgctcactataaatatatttttatatgagagtatctgttttttaggttgatttgcaaattttaaaaaattttttgtaagaaaatggaaatgtctccgtctaacattatgtgtgtgggagtttattatgactttttcacttcgtgcttattcaagcaaaatatttttacatttaatactattatttaaggagtttatcatgaaaaaaattaatttattaaccggcgtacttgctcttactattgcatcattagcatcagctagcacaacaaatatgaaagaaagtgtaatgcattcagacgatattaaacaagagattagctataacatgggaaatgatctgggaagtatgaattatcataaaccgactgttagagagtatgatagacgtatgaaaggggataaataattttcagaggcttatcatagaatatgataagccattattatacatggagaatttat Mask Tandem Repeat Region ================================================ ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Find is-nt database================================================ Query_seq: AA02594:AA02595|AA02594:AA02595:conserved hypothetical protein:cytochrome c peroxidase:->->:1805185..1805880 696 ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: AA02594:AA02595|AA02594:AA02595:conserved hypothetical protein:cytochrome c peroxidase:->->:1805185..1805880 696 ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: AA02594:AA02595|AA02594:AA02595:conserved hypothetical protein:cytochrome c peroxidase:->->:1805185..1805880 696 ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Predict ORF larger than 30AA ================================================ Protein_Len: 35 Strand: + Start: 63 End: 167 .............................................................. M P F H T S I I L S N S R F M I I H T S Q I I S H V I A N L L F N I V ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 56 Strand: + Start: 148 End: 315 ................................................................................................................................................... M S C L I S S E C I T L S F I F V V L A D A N D A I V R A S T P V N K L I F F M I N S L N N S I K C K N I L L E ............................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 337 End: 531 ................................................................................................................................................................................................................................................................................................................................................ M I N S H T H N V R R R H F H F L T K N F L K F A N Q P K K Q I L S Y K N I F I V S A L N R Y L I T K I Y F I H C F F K ..................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 591 End: 683 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M L E D N Y E K I C T E N G G C R Y C W L F R S C R V R S S V ............. Protein_Len: 54 Strand: + Start: 535 End: 696 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M I C F L L Y L T D N P F F V F T F K C W R T I M K K F A L K T A V V A I V G Y L G V V G Y V H Q Y D K G Q Protein_Len: 32 Strand: - Start: 559 End: 654 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. G I I G E E N K S K L T P P C N H F F K C Q F R R N D S N N A M .......................................... Protein_Len: 37 Strand: - Start: 534 End: 644 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I M H K R K Y K V S L G K K T K V K L H Q L V I I F F N A S F V A T T A M .................................................... Protein_Len: 39 Strand: - Start: 280 End: 396 ....................................................................................................................................................................................................................................................................................... I I T N F T F I N Q K F L C S T F F D Y Y V G V C M I N S P S M E M K K C F M ............................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 60 End: 353 ........................................................... M V S E K M N T T S A S A L S A I T L A L V G T L L N I K K M I F E K F L L I L H L F I K S S Y A R L S F T M I F E W M ....................................................................................................................................................................................................................................................................................................................................................... ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 93 HP_score: -11.0 Tail_Score: -3.8211 Start: 23 End: 49 Full_Region: ataaataattttcag aggcttatcata gaa tatgataagcca ttattatacatggag ......................aggcttatcatagaatatgataagcca....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -14.5 Tail_Score: -2.88945 Start: 24 End: 48 Full_Region: taaataattttcaga ggcttatcata gaa tatgataagcc attattatacatgga .......................ggcttatcatagaatatgataagcc........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Find igs database================================================ Query_seq: AA02594:AA02595|AA02594:AA02595:conserved hypothetical protein:cytochrome c peroxidase:->->:1805185..1805880 696 ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttacaaaaaattttttaaaatttgcaaatcaacctaaaaaacagatactctcatataaaaatatatttatagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Intra-Species Hit: Count: 1 Min: 1 Max: 696 Len: 696 Subject: aact_AA02594_AA02595|conserved hypothetical protein:cytochrome c peroxidase|POSITIVE:POSITIVE|[1805185,1805880]|696 HSP 1 e-value: 0.0 bit: 729.0 Len: 389 Query Start:1 Query End:389 Subject Strand: POSITIVE Subject Start: 1 Subject End: 389 ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaannnnnnncatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttac................................................................................................................................................................................................................................................................................................................... ataaattctccatgtataataatggcttatcatattctatgataagcctctgaaaattatttatcccctttcatacgtctatcatactctctaacagtcggtttatgataattcatacttcccagatcatttcccatgttatagctaatctcttgtttaatatcgtctgaatgcattacactttctttcatatttgttgtgctagctgatgctaatgatgcaatagtaagagcaagtacgccggttaataaattaatttttttcatgataaactccttaaataatagtattaaatgtaaaaatattttgcttgaataagcacgaagtgaaaaagtcataataaactcccacacacataatgttagacggagacatttccattttcttac................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-135 bit: 482.0 Len: 243 Query Start:454 Query End:696 Subject Strand: POSITIVE Subject Start: 454 Subject End: 696 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................atagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................atagtgagcgctctaaatagatatttaattactaaaatctatttcatccattgttttttcaaattgaatttattgatttaaatcatatgtttcctcttatatttaaccgataatcccttcttcgtttttacttttaagtgttggaggacaattatgaaaaaatttgcactgaaaacggcggttgtcgctattgttggctatttaggagttgtagggtacgttcatcagtatgataaaggacaa Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUAAAUUCUCCAUGUAUAAUAAUGGCUUAUCAUAUUCUAUGAUAAGCCUCUGAAAAUUAUUUAUCCCCUUUCAUACGUCUAUCAUACUCUCUAACAGUCGGUUUAUGAUAAUUCAUACUUCCCAGAUCAUUUCCCAUGUUAUAGCUAAUCUCUUGUUUAAUAUCGUCUGAAUGCAUUACACUUUCUUUCAUAUUUGUUGUGCUAGCUGAUGCUAAUGAUGCAAUAGUAAGAGCAAGUACGCCGGUUAAUAAAUUAAUUUUUUUCAUGAUAAACUCCUUAAAUAAUAGUAUUAAAUGUAAAAAUAUUUUGCUUGAAUAAGCACGAAGUGAAAAAGUCAUAAUAAACUCCCACACACAUAAUGUUAGACGGAGACAUUUCCAUUUUCUUACAAAAAAUUUUUUAAAAUUUGCAAAUCAACCUAAAAAACAGAUACUCUCAUAUAAAAAUAUAUUUAUAGUGAGCGCUCUAAAUAGAUAUUUAAUUACUAAAAUCUAUUUCAUCCAUUGUUUUUUCAAAUUGAAUUUAUUGAUUUAAAUCAUAUGUUUCCUCUUAUAUUUAACCGAUAAUCCCUUCUUCGUUUUUACUUUUAAGUGUUGGAGGACAAUUAUGAAAAAAUUUGCACUGAAAACGGCGGUUGUCGCUAUUGUUGGCUAUUUAGGAGUUGUAGGGUACGUUCAUCAGUAUGAUAAAGGACAA .......................(((((((((((...)))))))))))..................((((((((((......(.((((((.((((....((..(((((....)))))...)).........(((......(((((((((..(((((((..............((((.(((..(........)..))).))))..((((.(((.......))).))))..)))))))..(((((..........(((.((((((((((((....(((((.((((......(((((.((((((((....(((((....))))).((((.((...(((........)))...........(((((.(((.((((((((....((((.....(((.((((((.....((((((...........(((((((((...(.((((((((((......))))).))))).)....((((((((.((((.....))))))))))))......))))))))))))))))))))).)))....))))...))))))))))).)))))..........)).))))...)))))))).))))).)))).)))))..)))))))))))).))).........)))))............)))))))))...))))))).)))))).).......))))))..)))).... (-136.63) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUGUCCUUUAUCAUACUGAUGAACGUACCCUACAACUCCUAAAUAGCCAACAAUAGCGACAACCGCCGUUUUCAGUGCAAAUUUUUUCAUAAUUGUCCUCCAACACUUAAAAGUAAAAACGAAGAAGGGAUUAUCGGUUAAAUAUAAGAGGAAACAUAUGAUUUAAAUCAAUAAAUUCAAUUUGAAAAAACAAUGGAUGAAAUAGAUUUUAGUAAUUAAAUAUCUAUUUAGAGCGCUCACUAUAAAUAUAUUUUUAUAUGAGAGUAUCUGUUUUUUAGGUUGAUUUGCAAAUUUUAAAAAAUUUUUUGUAAGAAAAUGGAAAUGUCUCCGUCUAACAUUAUGUGUGUGGGAGUUUAUUAUGACUUUUUCACUUCGUGCUUAUUCAAGCAAAAUAUUUUUACAUUUAAUACUAUUAUUUAAGGAGUUUAUCAUGAAAAAAAUUAAUUUAUUAACCGGCGUACUUGCUCUUACUAUUGCAUCAUUAGCAUCAGCUAGCACAACAAAUAUGAAAGAAAGUGUAAUGCAUUCAGACGAUAUUAAACAAGAGAUUAGCUAUAACAUGGGAAAUGAUCUGGGAAGUAUGAAUUAUCAUAAACCGACUGUUAGAGAGUAUGAUAGACGUAUGAAAGGGGAUAAAUAAUUUUCAGAGGCUUAUCAUAGAAUAUGAUAAGCCAUUAUUAUACAUGGAGAAUUUAU ((.(((.((((((((((....(((...(((..((..(((((.(((((........(((.....)))(((((..((((((..((((((((((.((((................((((.....((((.(((..(..(((((((........(....).((((((.....((..((((((((((((((((((.((.......(((((((((((((...))))).))))))))...((.((((.((((((......)))))))))).))...))))))))))))))).............((((((.((((((..(((.(((((......))))).......((((.(((..((((((......))))))..)))..))))....)))..)))))).))))))...............)))))..))....))))))...............)))))))..)..)))..))))....))))....(((((....)))))....)))).)))))))))).......)))))).)))))..................)))))....)))))..))....)))...(((((....)))))........)))....))))))))))..((((((..(..(((.....)))..)...(((((((((((...)))))))))))....))))))..))).))..... (-144.50) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 352 669 629 74 37 aact:AA02275|5end_conserved_hypothetical_protein_1549729..1549959_POSITIVE 343 670 622 171 112 aact:AA01781|5end_molybdenum_ABC_transporter,_periplasmic_substrate-binding_1201891..1202121_POSITIVE 337 640 591 230 185 aact:AA00291|5end_hypothetical_protein_201715..201945_POSITIVE 329 669 623 143 92 aact:AA01537|5end_possible_glucokinase_regulatory_protein_1030616..1030846_POSITIVE 326 669 622 76 29 aact:AA02303|5end_ATP-dependent_DNA_helicase_1572696..1572926_POSITIVE 325 673 631 40 3 aact:AA02470|5end_glucose_kinase_1706730..1706960_POSITIVE 325 679 634 163 126 aact:AA00048|5end_conserved_hypothetical_protein_38853..39083_POSITIVE 321 660 620 109 62 aact:AA02140|5end_ABC_transporter_ATP-binding_protein_1462144..1462374_POSITIVE 321 673 632 173 131 aact:AA00041|5end_cytochrome_c-type_biogenesis_protein_31881..32111_POSITIVE 318 651 620 72 36 aact:AA00329|5end_molybdopterin-guanine_dinucleotide_biosynthesis_protein_222737..222967_POSITIVE 314 680 631 75 36 aact:AA02158|5end_TonB-dependent_outer_membrane_receptor_1476155..1476385_POSITIVE 309 652 612 52 12 aact:AA01938|5end_NAD(P)_transhydrogenase_subunit_alpha_1309493..1309723_POSITIVE 307 669 628 96 54 aact:AA02902|5end_aerobic_respiration_control_protein_2031171..2031401_POSITIVE 307 670 622 63 20 aact:AA00832|5end_D-alanine-D-alanine_ligase_B_572769..572999_POSITIVE 307 680 631 215 171 aact:AA00101|5end_fimbrial_biogenesis_and_twitching_motility_protein_73782..74012_POSITIVE 304 669 622 79 30 aact:AA00452|5end_phosphomannomutase;_phosphoglucomutase_315288..315518_POSITIVE 303 250 202 60 12 aact:AA00876|5end_tight_adherence_protein_C_607761..607991_POSITIVE 303 678 631 73 25 aact:AA00805|5end_fumarate_reductase_iron-sulfur_protein_551583..551813_POSITIVE 301 669 622 152 107 aact:AA01428|5end_acetolactate_synthase_958688..958918_POSITIVE 301 208 167 60 13 aact:AA01234|5end_50S_ribosomal_protein_L18_841400..841630_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 352 669 629 46 9 aact:AA02274|3end_hypothetical_protein_1549781..1549931_POSITIVE 345 675 632 137 98 aact:AA01850|3end_conserved_hypothetical_protein;_possible_enzyme_of_sugar_metabolism_1244614..1244764_POSITIVE 343 670 622 134 75 aact:AA01780|3end_ABC-related_molybdenum_transport_system_permease_protein_1201934..1202084_POSITIVE 326 669 622 95 48 aact:AA02301|3end_chorismate_lyase_1572795..1572945_POSITIVE 321 660 620 103 56 aact:AA02139|3end_possible_membrane_protein_1462218..1462368_POSITIVE 314 680 631 145 106 aact:AA02157|3end_TonB-dependent_outer_membrane_receptor_1476305..1476455_POSITIVE 307 670 622 63 20 aact:AA00831|3end_cell_division_protein_Q_572849..572999_POSITIVE 304 669 622 59 10 aact:AA00451|3end_hypothetical_protein_315348..315498_POSITIVE 303 250 202 60 12 aact:AA00875|3end_tight_adherence_protein_B_607841..607991_POSITIVE 303 678 631 65 17 aact:AA00804|3end_fumarate_reductase_flavoprotein_subunit_A_551655..551805_POSITIVE 298 673 631 86 44 aact:AA00259|3end_conserved_hypothetical_protein_183332..183482_POSITIVE 297 651 619 150 116 aact:AA02357|3end_bifunctional_protein:_aspartokinase_I;_homoserine_dehydrogenaseI_1617192..1617342_POSITIVE 297 659 620 149 99 aact:AA01017|3end_conserved_hypothetical_protein_711726..711876_POSITIVE 289 651 616 135 101 aact:AA00709|3end_metallocluster_assembly_(NifU_protein)_487838..487988_POSITIVE 287 670 629 52 7 aact:AA00013|3end_hypothetical_protein_6891..7041_POSITIVE 283 637 591 126 74 aact:AA00537|3end_conserved_hypothetical_protein_368779..368929_POSITIVE 280 665 628 68 27 aact:AA01727|3end_conserved_hypothetical_protein_(possible_HipA_protein)_1168420..1168570_POSITIVE 279 666 623 86 44 aact:AA01600|3end_phosphotransferase_system_enzyme_I_1082285..1082435_POSITIVE 278 657 619 149 109 aact:AA02905|3end_conserved_hypothetical_protein_2033405..2033555_POSITIVE 276 672 631 44 5 aact:AA01426|3end_threonine_deaminase_(dehydratase)_958655..958805_POSITIVE