Origin IGS:
taataagaattaatgctcaactctgtgttagtgataggggttgtagcgatgtgaatttgaacatgacgcaagccgaggctttcaaaatttatcagcttgcgccaagttcaaaaggcgagaaagtcgattattcccaatataaggaattttgggctgtctcattttcagcaacgttatctttatggcttatagcttactttgtcggtaggcttttaaagtttttgaagtaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgatagttttgggtggactggccgaaaacaagataactgaaggcgaaacaggtttttcatttcttcctaaaggttttttaacgggtaaatccaaaaatgatactaggacagatatagtgattttactccaagtgaaacttgtctaactattttccgc
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
gcggaaaatagttagacaagtttcacttggagtaaaatcactatatctgtcctagtatcatttttggatttacccgttaaaaaacctttaggaagaaatgaaaaacctgtttcgccttcagttatcttgttttcggccagtccacccaaaactatcacatcgccattttttacacttacatctgtgacaatgtcgcgttttataagtgtcggagattgattaacacctgtaaccggctacttttttaaatgtttttaacatagtaaaatttccttagttgcgttacttcaaaaactttaaaagcctaccgacaaagtaagctataagccataaagataacgttgctgaaaatgagacagcccaaaattccttatattgggaataatcgactttctcgccttttgaacttggcgcaagctgataaattttgaaagcctcggcttgcgtcatgttcaaattcacatcgctacaacccctatcactaacacagagttgagcattaattcttatta

Mask Tandem Repeat Region ================================================
taataagaattaatgctcaactctgtgttagtgataggggttgtagcgatgtgaatttgaacatgacgcaagccgaggctttcaaaatttatcagcttgcgccaagttcaaaaggcgagaaagtcgattattcccaatataaggaattttgggctgtctcattttcagcaacgttatctttatggcttatagcttactttgtcggtaggcttttaaagtttttgaagtaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgatagttttgggtggactggccgaaaacaagataactgaaggcgaaacaggtttttcatttcttcctaaaggttttttaacgggtaaatccaaaaatgatactaggacagatatagtgattttactccaagtgaaacttgtctaactattttccgc

Find is-nt database================================================
Query_seq: AA02118:AA02119|AA02118:AA02119:hypothetical protein:hypothetical protein:->->:1446000..1446511 512
taataagaattaatgctcaactctgtgttagtgataggggttgtagcgatgtgaatttgaacatgacgcaagccgaggctttcaaaatttatcagcttgcgccaagttcaaaaggcgagaaagtcgattattcccaatataaggaattttgggctgtctcattttcagcaacgttatctttatggcttatagcttactttgtcggtaggcttttaaagtttttgaagtaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgatagttttgggtggactggccgaaaacaagataactgaaggcgaaacaggtttttcatttcttcctaaaggttttttaacgggtaaatccaaaaatgatactaggacagatatagtgattttactccaagtgaaacttgtctaactattttccgc
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: AA02118:AA02119|AA02118:AA02119:hypothetical protein:hypothetical protein:->->:1446000..1446511 512
taataagaattaatgctcaactctgtgttagtgataggggttgtagcgatgtgaatttgaacatgacgcaagccgaggctttcaaaatttatcagcttgcgccaagttcaaaaggcgagaaagtcgattattcccaatataaggaattttgggctgtctcattttcagcaacgttatctttatggcttatagcttactttgtcggtaggcttttaaagtttttgaagtaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgatagttttgggtggactggccgaaaacaagataactgaaggcgaaacaggtttttcatttcttcctaaaggttttttaacgggtaaatccaaaaatgatactaggacagatatagtgattttactccaagtgaaacttgtctaactattttccgc
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: AA02118:AA02119|AA02118:AA02119:hypothetical protein:hypothetical protein:->->:1446000..1446511 512
taataagaattaatgctcaactctgtgttagtgataggggttgtagcgatgtgaatttgaacatgacgcaagccgaggctttcaaaatttatcagcttgcgccaagttcaaaaggcgagaaagtcgattattcccaatataaggaattttgggctgtctcattttcagcaacgttatctttatggcttatagcttactttgtcggtaggcttttaaagtttttgaagtaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttacaggtgttaatcaatctccgacacttataaaacgcgacattgtcacagatgtaagtgtaaaaaatggcgatgtgatagttttgggtggactggccgaaaacaagataactgaaggcgaaacaggtttttcatttcttcctaaaggttttttaacgggtaaatccaaaaatgatactaggacagatatagtgattttactccaagtgaaacttgtctaactattttccgc
Intra-Species Hit: Count: 0

Inter-species Hit: Count: 6	Min: 9	Max: 468	Len: 460
Subject: UniRef90_Q7VLJ5 Cluster: Putative phage-related secreted protein; n=1; Haemophilus ducreyi|Rep: Putative phage-related secreted protein - Haemophilus ducreyi
HSP  1	e-value: 1.0E-18	bit: 94.7	Len: 186	Query Start:283	Query End:468	Subject Strand: null	Subject Start: 304	Subject End: 364
.......................................................................................................................................................................................................................................................................................... T  G  V  N  Q  S  P  T  L  I  K  R  D  I  V  T  D  V  S  V  K  N  G  D  V  I  V  L  G  G  L  A  E  N  K  I  T  E  G  E  T  G  F  S  F  L  P  K  G  F  L  T  G  K  S  K  N  D  T  R  T  D ............................................
.......................................................................................................................................................................................................................................................................................... T  G  V  N  N  S  P  T  L  I  K  R  D  I  V  T  D  I  T  V  K  S  G  E  V  I  V  L  G  G  L  A  E  N  K  Q  T  E  G  N  T  G  F  S  F  L  P  K  -  I  L  T  G  K  S  N  R  S  E  K  T  D ............................................

Subject: UniRef90_UPI00005F1DF3 Cluster: COG1450: Type II secretory pathway, component PulD; n=1; Escherichia coli E24377A|Rep: COG1450: Type II secretory pathway, component PulD - Escherichia coli E24377A
HSP  1	e-value: 5.0E-11	bit: 69.3	Len: 150	Query Start:283	Query End:432	Subject Strand: null	Subject Start: 323	Subject End: 372
.......................................................................................................................................................................................................................................................................................... T  G  V  N  Q  S  P  T  L  I  K  R  D  I  V  T  D  V  S  V  K  N  G  D  V  I  V  L  G  G  L  A  E  N  K  I  T  E  G  E  T  G  F  S  F  L  P  K  G  F ................................................................................
.......................................................................................................................................................................................................................................................................................... T  G  V  N  N  T  P  T  L  I  K  R  E  V  S  T  S  V  S  L  N  D  G  D  I  I  V  L  G  G  L  A  E  N  K  T  S  K  A  R  T  G  L  S  F  L  P  D  V  F ................................................................................

Subject: UniRef90_Q7TTG4 Cluster: Hypothetical protein; n=1; Haemophilus ducreyi|Rep: Hypothetical protein - Haemophilus ducreyi
HSP  1	e-value: 4.0E-10	bit: 66.2	Len: 219	Query Start:9	Query End:227	Subject Strand: null	Subject Start: 7	Subject End: 78
........ I  N  A  Q  L  C  V  S  D  R  G  C  S  D  V  N  L  N  M  T  Q  A  E  A  F  K  I  Y  Q  L  A  P  S  S  K  G  E  K  V  D  Y  S  Q  Y  K  E  F  W  A  V  S  F  S  A  T  L  S  L  W  L  I  A  Y  F  V  G  R  L  L  K  F  L  K .............................................................................................................................................................................................................................................................................................
........ I  Q  A  E  L  C  S  T  L  N  N  C  Q  H  V  E  L  K  L  P  Q  A  E  L  A  K  L  -  Q  L  V  A  T  S  K  S  E  T  I  N  Y  S  D  Y  T  E  F  F  L  V  S  F  S  I  T  L  S  F  W  L  L  A  K  T  I  G  I  M  L  T  I  I  K .............................................................................................................................................................................................................................................................................................

Subject: UniRef90_Q0WEP1 Cluster: Putative phage-related secreted protein; n=3; Enterobacteriaceae|Rep: Putative phage-related secreted protein - Yersinia pestis
HSP  1	e-value: 5.0E-9	bit: 62.8	Len: 135	Query Start:283	Query End:417	Subject Strand: null	Subject Start: 326	Subject End: 370
.......................................................................................................................................................................................................................................................................................... T  G  V  N  Q  S  P  T  L  I  K  R  D  I  V  T  D  V  S  V  K  N  G  D  V  I  V  L  G  G  L  A  E  N  K  I  T  E  G  E  T  G  F  S  F ...............................................................................................
.......................................................................................................................................................................................................................................................................................... T  G  V  N  N  S  P  T  L  I  K  R  D  V  T  T  E  V  S  L  A  D  G  D  I  I  L  L  G  G  L  A  E  Q  K  D  S  K  A  S  S  G  W  S  F ...............................................................................................

Subject: UniRef90_Q1H1B2 Cluster: Type II and III secretion system protein; n=1; Methylobacillus flagellatus KT|Rep: Type II and III secretion system protein - Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)
HSP  1	e-value: 1.0E-8	bit: 61.2	Len: 186	Query Start:283	Query End:468	Subject Strand: null	Subject Start: 325	Subject End: 385
.......................................................................................................................................................................................................................................................................................... T  G  V  N  Q  S  P  T  L  I  K  R  D  I  V  T  D  V  S  V  K  N  G  D  V  I  V  L  G  G  L  A  E  N  K  I  T  E  G  E  T  G  F  S  F  L  P  K  G  F  L  T  G  K  S  K  N  D  T  R  T  D ............................................
.......................................................................................................................................................................................................................................................................................... T  G  V  N  Q  S  P  T  L  L  K  R  E  I  K  T  V  V  N  T  R  D  G  E  L  I  L  L  G  G  L  N  E  S  R  L  S  K  Q  R  Q  G  L  S  F  L  P  R  L  F  -  N  A  N  T  D  S  D  E  K  S  D ............................................

Subject: UniRef90_A3NCC4 Cluster: Type II secretory pathway, component PulD; n=1; Burkholderia pseudomallei 668|Rep: Type II secretory pathway, component PulD - Burkholderia pseudomallei (strain 668)
HSP  1	e-value: 2.0E-6	bit: 54.3	Len: 186	Query Start:283	Query End:468	Subject Strand: null	Subject Start: 324	Subject End: 384
.......................................................................................................................................................................................................................................................................................... T  G  V  N  Q  S  P  T  L  I  K  R  D  I  V  T  D  V  S  V  K  N  G  D  V  I  V  L  G  G  L  A  E  N  K  I  T  E  G  E  T  G  F  S  F  L  P  K  G  F  L  T  G  K  S  K  N  D  T  R  T  D ............................................
.......................................................................................................................................................................................................................................................................................... T  G  V  N  N  S  P  T  K  N  T  R  K  L  E  S  S  F  S  V  E  D  G  D  A  V  L  I  G  G  L  T  Q  D  K  E  S  H  L  D  S  G  L  S  F  L  P  -  S  W  M  R  G  R  A  S  N  S  S  R  T  E ............................................


taataagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatagtgattttactccaagtgaaacttgtctaactattttccgc
Predict ORF larger than 30AA ================================================
Protein_Len: 33	Strand: +	Start: 91	End: 189
.......................................................................................... M  S  L  R  Q  V  Q  K  A  R  K  S  I  I  P  N  I  R  N  F  G  L  S  H  F  Q  Q  R  Y  L  Y  G  L ...................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 3	End: 227
.. M  R  I  N  A  Q  L  C  V  S  D  R  G  C  S  D  V  N  L  N  M  T  Q  A  E  A  F  K  I  Y  Q  L  A  P  S  S  K  G  E  K  V  D  Y  S  Q  Y  K  E  F  W  A  V  S  F  S  A  T  L  S  L .............................................................................................................................................................................................................................................................................................
Protein_Len: 32	Strand: +	Start: 297	End: 392
........................................................................................................................................................................................................................................................................................................ M  S  D  T  Y  K  T  R  H  C  H  R  C  K  C  K  K  W  R  C  D  S  F  G  W  T  G  R  K  Q  D  N ........................................................................................................................
Protein_Len: 60	Strand: +	Start: 310	End: 498
..................................................................................................................................................................................................................................................................................................................... M  K  R  D  I  V  T  D  V  S  V  K  N  G  D  V  I  V  L  G  G  L  A  E  N  K  I  T  E  G  E  T  G  F  S  F  L  P  K  G  F  L  T  G  K  S  K  N  D  T  R  T  D  I  V  I  L  L  Q  V ..............
Protein_Len: 60	Strand: -	Start: 297	End: 476
........................................................................................................................................................................................................................................................................................................ D  G  V  S  I  F  R  S  M  T  V  S  T  L  T  F  F  P  S  T  I  T  K  P  P  S  A  S  F  L  I  V  S  P  S  V  P  K  E  N  R  G  L  P  K  K  V  P  L  D  L  F  S  V  L  V  S  I  T  M ....................................
Protein_Len: 33	Strand: -	Start: 85	End: 183
.................................................................................... F  K  D  A  Q  A  L  N  L  L  R  S  L  R  N  N  G  I  Y  P  I  K  P  Q  R  M  K  L  L  T  I  K  M .........................................................................................................................................................................................................................................................................................................................................
Protein_Len: 31	Strand: -	Start: 3	End: 95
.. Y  S  N  I  S  L  E  T  N  T  I  P  T  T  A  I  H  I  Q  V  H  R  L  G  L  S  E  F  N  I  M .................................................................................................................................................................................................................................................................................................................................................................................................................................

taataagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatagtgattttactccaagtgaaacttgtctaactattttccgc
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

taataagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatagtgattttactccaagtgaaacttgtctaactattttccgc
Predict TransTerm conf > 70================================================

Find igs database================================================
Query_seq: AA02118:AA02119|AA02118:AA02119:hypothetical protein:hypothetical protein:->->:1446000..1446511 512
taataagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatagtgattttactccaagtgaaacttgtctaactattttccgc
Intra-Species Hit: Count: 1	Min: 228	Max: 512	Len: 285
Subject: aact_AA02118_AA02119|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1446000,1446511]|512
HSP  1	e-value: 1.0E-22	bit: 109.0	Len: 55	Query Start:228	Query End:282	Subject Strand: POSITIVE	Subject Start: 228	Subject End: 282
...................................................................................................................................................................................................................................taacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggtt......................................................................................................................................................................................................................................
...................................................................................................................................................................................................................................taacgcaactaaggaaattttactatgttaaaaacatttaaaaaagtagccggtt......................................................................................................................................................................................................................................
HSP  2	e-value: 4.0E-16	bit: 87.7	Len: 44	Query Start:469	Query End:512	Subject Strand: POSITIVE	Subject Start: 469	Subject End: 512
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atagtgattttactccaagtgaaacttgtctaactattttccgc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atagtgattttactccaagtgaaacttgtctaactattttccgc

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UAACGCAACUAAGGAAAUUUUACUAUGUUAAAAACAUUUAAAAAAGUAGCCGGUUACAGGUGUUAAUCAAUCUCCGACACUUAUAAAACGCGACAUUGUCACAGAUGUAAGUGUAAAAAAUGGCGAUGUGAUAGUUUUGGGUGGACUGGCCGAAAACAAGAUAACUGAAGGCGAAACAGGUUUUUCAUUUCUUCCUAAAGGUUUUUUAACGGGUAAAUCCAAAAAUGAUACUAGGACAGAUAUAGUGAUUUUACUCCAAGUGAAACUUGUCUAACUAUUUUCCGC
............(((((..((((((((((................((((....)))).((((((((((((((.((((((((((((....(.(((...))).)...)))))))))......))).))).))))..((((((((..(((.(..((((((.........((((..((((......)))).)))).........))))))...).)))..)))))))).)))))))......))))))))))........((((.....)))).........))))).. (-56.57)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
GCGGAAAAUAGUUAGACAAGUUUCACUUGGAGUAAAAUCACUAUAUCUGUCCUAGUAUCAUUUUUGGAUUUACCCGUUAAAAAACCUUUAGGAAGAAAUGAAAAACCUGUUUCGCCUUCAGUUAUCUUGUUUUCGGCCAGUCCACCCAAAACUAUCACAUCGCCAUUUUUUACACUUACAUCUGUGACAAUGUCGCGUUUUAUAAGUGUCGGAGAUUGAUUAACACCUGUAACCGGCUACUUUUUUAAAUGUUUUUAACAUAGUAAAAUUUCCUUAGUUGCGUUA
((((...((((((.((((((....(((.((((.............(((.((((((.........(((......)))...........)))))))))...((((......))))..)))))))...))))))...((.....))......))))))....)))).(((((..(((((((....((((((...)))))).....)))))))..))))).............((((((((((...(((((.((((.....))))..)))))......)))))).)))) (-47.95)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
350	168	121	54	3	aact:AA00552|5end_periplasmic_nitrate_reductase_precursor_377331..377561_POSITIVE
308	98	58	147	109	aact:AA01651|5end_hypothetical_protein_1119796..1120026_POSITIVE
302	100	52	218	161	aact:AA01561|5end_conserved_hypothetical_protein_1046505..1046735_POSITIVE
296	173	137	130	99	aact:AA00525|5end_hypothetical_protein_359254..359484_POSITIVE
293	178	136	90	43	aact:AA00851|5end_carbon_starvation_protein_586760..586990_POSITIVE
282	152	121	202	167	aact:AA00855|5end_arginine_ABC_transporter,_permease_protein_589584..589814_POSITIVE
280	155	111	90	51	aact:AA01266|5end_hypothetical_protein_862076..862306_POSITIVE
279	155	121	190	152	aact:AA02321|5end_conserved_hypothetical_protein_1585163..1585393_POSITIVE
278	151	122	131	102	aact:AA01260|5end_hypothetical_protein_855550..855780_POSITIVE
275	130	90	46	1	aact:AA02195|5end_oxaloacetate_decarboxylase_alpha_chain_1494501..1494731_POSITIVE
274	140	95	212	161	aact:AA00302|5end_DNA_polymerase_III,_delta'_subunit_205127..205357_POSITIVE
273	155	111	226	182	aact:AA02456|5end_conserved_hypothetical_protein_1694743..1694973_POSITIVE
271	152	121	213	188	aact:AA02994|5end_probable_cation_transport_protein_2092793..2093023_POSITIVE
271	149	101	107	56	aact:AA02679|5end_formate_dehydrogenase,_gamma_subunit_1865480..1865710_POSITIVE
271	160	111	70	19	aact:AA01952|5end_ABC_transporter,_substrate_binding_protein_1318987..1319217_POSITIVE
271	177	131	102	63	aact:AA00012|5end_conserved_hypothetical_protein_6433..6663_POSITIVE
269	180	134	168	118	aact:AA01794|5end_glycine_cleavage_system_transcription_activator_1209708..1209938_POSITIVE
268	76	49	200	170	aact:AA02507|5end_penicillin-insensitive_murein_endopeptidase_A_1740058..1740288_POSITIVE
266	150	101	130	70	aact:AA00679|5end_cytoplasmic_axial_filament_(Ribonuclease_G)_463288..463518_POSITIVE
265	152	113	201	158	aact:AA02146|5end_iron(III)_ABC_transporter,_ATP-binding_protein_1468828..1469058_POSITIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
308	98	58	120	82	aact:AA01650|3end_maltose_transport_inner_membrane_protein_1119849..1119999_POSITIVE
302	100	52	138	81	aact:AA01559|3end_RecA_regulatory_protein,_RecX_1046505..1046655_POSITIVE
297	167	122	151	109	aact:AA02562|3end_adenine_specific_methylase_1785146..1785296_POSITIVE
280	155	111	106	67	aact:AA01265|3end_hypothetical_protein_862172..862322_POSITIVE
278	151	122	102	73	aact:AA01565|3end_conserved_hypothetical_protein_1050967..1051117_POSITIVE
277	176	132	54	7	aact:AA00551|3end_hypothetical_protein_377403..377553_POSITIVE
271	152	121	148	123	aact:AA02993|3end_6-phosphofructokinase_2092808..2092958_POSITIVE
271	149	101	70	19	aact:AA02678|3end_formate_dehydrogenase,_gamma_subunit_1865523..1865673_POSITIVE
264	139	94	59	2	aact:AA02714|3end_paraquat-inducible_protein_PqiA_homolog_1897167..1897317_POSITIVE
264	174	131	114	74	aact:AA01227|3end_hypothetical_protein_838845..838995_POSITIVE
262	133	91	97	44	aact:AA01264|3end_conserved_hypothetical_protein_862056..862206_POSITIVE
259	177	133	137	86	aact:AA01135|3end_possible_cell_filamentation_protein_777664..777814_POSITIVE
258	173	137	85	29	aact:AA00550|3end_ferredoxin-type_protein_377201..377351_POSITIVE
257	159	114	75	24	aact:AA01586|3end_DNA_mismatch_repair_protein_1068893..1069043_POSITIVE
254	180	134	43	4	aact:AA00954|3end_uroporphyrinogen_III_synthase_661070..661220_POSITIVE
254	149	101	146	94	aact:AA00461|3end_heat_shock_protein;_protease_322979..323129_POSITIVE
252	175	139	104	61	aact:AA01311|3end_transcriptional_regulator_889644..889794_POSITIVE
251	130	93	105	72	aact:AA02623|3end_dTDP-D-glucose_4,6-dehydratase_1827979..1828129_POSITIVE
249	167	121	118	59	aact:AA02289|3end_cell_division_protein_H,_a_metalloprotease_1561219..1561369_POSITIVE
248	214	171	74	26	aact:AA00290|3end_conserved_hypothetical_protein_201813..201963_POSITIVE