Origin IGS: taagcgacaataacggtatttctaccgctattttctaccctatttgaacggttttaaccgccaaaatcttgccgtacattcgacaattccttgcttatgcaatctaagtaaaatccaattaaccgctttatagtgtttatttccaatatcaacaaattgtgggtttcctgttaaagctaaagccttttcggctatctcaccgcaaaacggcccctgccgattttcttgtaatacttaggtaacccatcgtgctgtaattaaagatggtggtttaggctcttttggcatatacggctgaattaaagcattcatttcttgtgttaaaagttgtatttgaatagtcaattcatcttgcttttcttttagtgatagcaagcaagagattaattcgtgcttggataatttttgtgacataatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tgattggcattaacggcattatgtagcagttgcacaaagatttaaccgattgaaaatactaaaatccctattggaattttactcaatagggatttttctattatgtcacaaaaattatccaagcacgaattaatctcttgcttgctatcactaaaagaaaagcaagatgaattgactattcaaatacaacttttaacacaagaaatgaatgctttaattcagccgtatatgccaaaagagcctaaaccaccatctttaattacagcacgatgggttacctaagtattacaagaaaatcggcaggggccgttttgcggtgagatagccgaaaaggctttagctttaacaggaaacccacaatttgttgatattggaaataaacactataaagcggttaattggattttacttagattgcataagcaaggaattgtcgaatgtacggcaagattttggcggttaaaaccgttcaaatagggtagaaaatagcggtagaaataccgttattgtcgctta Mask Tandem Repeat Region ================================================ taagcgacaataacggtatttctaccgctattttctaccctatttgaacggttttaaccgccaaaatcttgccgtacattcgacaattccttgcttatgcaatctaagtaaaatccaattaaccgctttatagtgtttatttccaatatcaacaaattgtgggtttcctgttaaagctaaagccttttcggctatctcaccgcaaaacggcccctgccgattttcttgtaatacttaggtaacccatcgtgctgtaattaaagatggtggtttaggctcttttggcatatacggctgaattaaagcattcatttcttgtgttaaaagttgtatttgaatagtcaattcatcttgcttttcttttagtgatagcaagcaagagattaattcgtgcttggataatttttgtgacataatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Find is-nt database================================================ Query_seq: AA00815:AA00816|AA00815:AA00816:conserved hypothetical protein:lacZ expression regulator:->->:560524..561039 516 taagcgacaataacggtatttctaccgctattttctaccctatttgaacggttttaaccgccaaaatcttgccgtacattcgacaattccttgcttatgcaatctaagtaaaatccaattaaccgctttatagtgtttatttccaatatcaacaaattgtgggtttcctgttaaagctaaagccttttcggctatctcaccgcaaaacggcccctgccgattttcttgtaatacttaggtaacccatcgtgctgtaattaaagatggtggtttaggctcttttggcatatacggctgaattaaagcattcatttcttgtgttaaaagttgtatttgaatagtcaattcatcttgcttttcttttagtgatagcaagcaagagattaattcgtgcttggataatttttgtgacataatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: AA00815:AA00816|AA00815:AA00816:conserved hypothetical protein:lacZ expression regulator:->->:560524..561039 516 taagcgacaataacggtatttctaccgctattttctaccctatttgaacggttttaaccgccaaaatcttgccgtacattcgacaattccttgcttatgcaatctaagtaaaatccaattaaccgctttatagtgtttatttccaatatcaacaaattgtgggtttcctgttaaagctaaagccttttcggctatctcaccgcaaaacggcccctgccgattttcttgtaatacttaggtaacccatcgtgctgtaattaaagatggtggtttaggctcttttggcatatacggctgaattaaagcattcatttcttgtgttaaaagttgtatttgaatagtcaattcatcttgcttttcttttagtgatagcaagcaagagattaattcgtgcttggataatttttgtgacataatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: AA00815:AA00816|AA00815:AA00816:conserved hypothetical protein:lacZ expression regulator:->->:560524..561039 516 taagcgacaataacggtatttctaccgctattttctaccctatttgaacggttttaaccgccaaaatcttgccgtacattcgacaattccttgcttatgcaatctaagtaaaatccaattaaccgctttatagtgtttatttccaatatcaacaaattgtgggtttcctgttaaagctaaagccttttcggctatctcaccgcaaaacggcccctgccgattttcttgtaatacttaggtaacccatcgtgctgtaattaaagatggtggtttaggctcttttggcatatacggctgaattaaagcattcatttcttgtgttaaaagttgtatttgaatagtcaattcatcttgcttttcttttagtgatagcaagcaagagattaattcgtgcttggataatttttgtgacataatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 52 Max: 414 Len: 363 Subject: UniRef90_Q7VL72 Cluster: Hypothetical protein; n=1; Haemophilus ducreyi|Rep: Hypothetical protein - Haemophilus ducreyi HSP 1 e-value: 9.0E-25 bit: 115.0 Len: 363 Query Start:52 Query End:414 Subject Strand: null Subject Start: 1 Subject End: 121 ................................................... M S Q K L S K H E L I S C L L S L K E K Q D E L T I Q I Q L L T Q E M N A L I Q P Y M P K E P K - P P S L I T A R W V T * V L Q E N R Q G P F C G E I A E K A L A L T G N P Q F V D I G N K H Y K A V N W I L L R L H K Q G I V E C T A R F W R L K ...................................................................................................... ................................................... M T Q K L S K Q E L G E R L L - L K E K Q E R L T K Q I N A L T Q E I G E L A L P F I P K A P K T P P S L I T M P L V A R V L R E Y G D W I Q C G E I A E Q V L K L Q G Q P Q F V D V G D S Y Y R A V K S M L L R L E K K G L V V R G G F H W R L K ...................................................................................................... taagcgacaataacggtatttctaccgctattttctaccctatttgaacggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Predict ORF larger than 30AA ================================================ Protein_Len: 30 Strand: + Start: 146 End: 235 ................................................................................................................................................. M S T N C G F P V K A K A F S A I S P Q N G P C R F S C N T ......................................................................................................................................................................................................................................................................................... Protein_Len: 45 Strand: + Start: 338 End: 472 ................................................................................................................................................................................................................................................................................................................................................. M V N S S C F S F S D S K Q E I N S C L D N F C D I I E K S L L S K I P I G I L V F S I G ............................................ Protein_Len: 60 Strand: - Start: 238 End: 468 ............................................................................................................................................................................................................................................. Y P Q I L A N M E Q T L L Q I Q I T L E D Q K E K L S L L C S I L E H K S L K Q S M I S F D R N L L I G I P I K T N E M ................................................ Protein_Len: 33 Strand: - Start: 57 End: 155 ........................................................ G G F D Q R V N S L E K S I C D L Y F G I L R K I T N I E L I L M ......................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 51 Strand: - Start: 43 End: 195 .......................................... K F P K L R W F R A T C E V I G Q K H L R L L I W N V A K Y H K N G I D V F Q P N G T L A L A K E A M ................................................................................................................................................................................................................................................................................................................................. taagcgacaataacggtatttctaccgctattttctaccctatttgaacggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taagcgacaataacggtatttctaccgctattttctaccctatttgaacggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 73 HP_score: -7.2 Tail_Score: -4.14243 Start: 208 End: 219 Full_Region: gtattacaagaaaat cggc aggg gccg ttttgcggtgagata ...............................................................................................................................................................................................................cggcaggggccg......................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 48 HP_score: -2.9 Tail_Score: -3.52451 Start: 335 End: 349 Full_Region: GTTAAAAGTTGTATT TGAAT AGTCA ATTCA TCTTGCTTTTCTTTT ..............................................................................................................................................................................................................................................................................................................................................TGAATAGTCAATTCA....................................................................................................................................................................... TransTerm Strand: + Conf: 81 HP_score: -7.2 Tail_Score: -4.55826 Start: 425 End: 452 Full_Region: GACATAATAGAAAAA TCCCTATTGAGT AAA ATTCCAATAGGGA TTTTAGTATTTTCAA ........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTATTGAGTAAAATTCCAATAGGGA................................................................ TransTerm Strand: - Conf: 86 HP_score: -6.4 Tail_Score: -5.1764 Start: 425 End: 452 Full_Region: ttgaaaatactaaaa tccctattggaa ttt tactcaataggga tttttctattatgtc ........................................................................................................................................................................................................................................................................................................................................................................................................................................tccctattggaattttactcaataggga................................................................ Find igs database================================================ Query_seq: AA00815:AA00816|AA00815:AA00816:conserved hypothetical protein:lacZ expression regulator:->->:560524..561039 516 taagcgacaataacggtatttctaccgctattttctaccctatttgaacggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca Intra-Species Hit: Count: 1 Min: 1 Max: 516 Len: 516 Subject: aact_AA00815_AA00816|conserved hypothetical protein:lacZ expression regulator|POSITIVE:POSITIVE|[560524,561039]|516 HSP 1 e-value: 9.0E-51 bit: 202.0 Len: 102 Query Start:415 Query End:516 Subject Strand: POSITIVE Subject Start: 415 Subject End: 516 ..............................................................................................................................................................................................................................................................................................................................................................................................................................aatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca ..............................................................................................................................................................................................................................................................................................................................................................................................................................aatagaaaaatccctattgagtaaaattccaatagggattttagtattttcaatcggttaaatctttgtgcaactgctacataatgccgttaatgccaatca HSP 2 e-value: 4.0E-19 bit: 97.6 Len: 49 Query Start:1 Query End:49 Subject Strand: POSITIVE Subject Start: 1 Subject End: 49 taagcgacaataacggtatttctaccgctattttctaccctatttgaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taagcgacaataacggtatttctaccgctattttctaccctatttgaac................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAGCGACAAUAACGGUAUUUCUACCGCUAUUUUCUACCCUAUUUGAACGGUUUUAACCGCCAAAAUCUUGCCGUACAUUCGACAAUUCCUUGCUUAUGCAAUCUAAGUAAAAUCCAAUUAACCGCUUUAUAGUGUUUAUUUCCAAUAUCAACAAAUUGUGGGUUUCCUGUUAAAGCUAAAGCCUUUUCGGCUAUCUCACCGCAAAACGGCCCCUGCCGAUUUUCUUGUAAUACUUAGGUAACCCAUCGUGCUGUAAUUAAAGAUGGUGGUUUAGGCUCUUUUGGCAUAUACGGCUGAAUUAAAGCAUUCAUUUCUUGUGUUAAAAGUUGUAUUUGAAUAGUCAAUUCAUCUUGCUUUUCUUUUAGUGAUAGCAAGCAAGAGAUUAAUUCGUGCUUGGAUAAUUUUUGUGACAUAAUAGAAAAAUCCCUAUUGAGUAAAAUUCCAAUAGGGAUUUUAGUAUUUUCAAUCGGUUAAAUCUUUGUGCAACUGCUACAUAAUGCCGUUAAUGCCAAUCA .....((.((((.(((((....))))).)))).))..............(((((.((((((((...((((....((((..(((........(((....)))(((((((((.........(((.((((....)))).)))............((((.((((((.......((....))...((((.....))))......))))))..((((....))))......))))..)))))))))......)))...))))....)))))))))))).)))))...(((((((..(((((.((((......)))).....((((((....((((((((..((...((((......((((((..((.......)).))))))..((((((((.((((....)))))))))))).))))..((((..(((((((((((((.(.......))))))))))))))..))))..............))...))))))))...)))))).)))))..)))))))... (-129.10) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UGAUUGGCAUUAACGGCAUUAUGUAGCAGUUGCACAAAGAUUUAACCGAUUGAAAAUACUAAAAUCCCUAUUGGAAUUUUACUCAAUAGGGAUUUUUCUAUUAUGUCACAAAAAUUAUCCAAGCACGAAUUAAUCUCUUGCUUGCUAUCACUAAAAGAAAAGCAAGAUGAAUUGACUAUUCAAAUACAACUUUUAACACAAGAAAUGAAUGCUUUAAUUCAGCCGUAUAUGCCAAAAGAGCCUAAACCACCAUCUUUAAUUACAGCACGAUGGGUUACCUAAGUAUUACAAGAAAAUCGGCAGGGGCCGUUUUGCGGUGAGAUAGCCGAAAAGGCUUUAGCUUUAACAGGAAACCCACAAUUUGUUGAUAUUGGAAAUAAACACUAUAAAGCGGUUAAUUGGAUUUUACUUAGAUUGCAUAAGCAAGGAAUUGUCGAAUGUACGGCAAGAUUUUGGCGGUUAAAACCGUUCAAAUAGGGUAGAAAAUAGCGGUAGAAAUACCGUUAUUGUCGCUUA ...(((((((..(((((....(((((.(((((......(((......(((....((((..((((((((((((((........))))))))))))))..))))..)))............((((((.((.......)).))))))..))).......(((.(((((......))).)).))).....))))).)).))).......(((((......))))))))))..)))))))....((((...((.(((((..............))))).....(((((((........(((((.(.(..((((((((((..(((....((((.....))))((((..(((((((....)........))))))..)))).......)))..))))))))))..)).))))))))))))..(((....))).))..((((((......))))))...(((((((((....)))).)))))..)))).((.((((((((((....)))))))))).))..... (-132.34) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 377 219 176 110 64 aact:AA00329|5end_molybdopterin-guanine_dinucleotide_biosynthesis_protein_222737..222967_POSITIVE 371 220 176 82 33 aact:AA01755|5end_cobalt_membrane_transport_protein_1185825..1186055_POSITIVE 350 303 261 204 158 aact:AA00340|5end_NADP(H)_oxidoreductase_(NAD(P)H_dehydrogenase_(quinone))_228797..229027_POSITIVE 350 303 261 94 48 aact:AA00339|5end_hypothetical_protein_228687..228917_POSITIVE 347 209 168 74 36 aact:AA00377|5end_acetyl-CoA_acetyltransferase_(Beta-ketothiolase,3-ketoacyl-CoA_thiolase)_253042..253272_POSITIVE 345 229 181 179 127 aact:AA02959|5end_pyrroline-5-carboxylate_(P5C)_reductase_2070540..2070770_POSITIVE 344 220 171 131 76 aact:AA01477|5end_type_I_restriction_enzyme_R_protein_992249..992479_POSITIVE 339 220 176 60 2 aact:AA01692|5end_hexulose-6-phosphate_synthase_1149178..1149408_POSITIVE 338 219 176 187 133 aact:AA02196|5end_oxaloacetate_decarboxylase_beta_chain_1496308..1496538_POSITIVE 338 97 51 59 8 aact:AA02035|5end_translation_initiation_factor_IF-3_1386349..1386579_POSITIVE 333 220 171 69 9 aact:AA01863|5end_hypothetical_protein_1252011..1252241_POSITIVE 332 219 179 191 155 aact:AA00553|5end_NapD_component_of_periplasmic_nitrate_reductase_379851..380081_POSITIVE 329 100 58 229 174 aact:AA00091|5end_short-patch_reverse_transcription_protein_67741..67971_POSITIVE 322 224 182 67 18 aact:AA00093|5end_L-serine_dehydratase_(L-serine_deaminase)_69732..69962_POSITIVE 321 248 201 47 2 aact:AA02411|5end_cysteine_synthetase_1656603..1656833_POSITIVE 320 219 176 183 134 aact:AA01338|5end_hypothetical_protein_904967..905197_POSITIVE 320 217 176 196 154 aact:AA00535|5end_hypothetical_protein_365695..365925_POSITIVE 318 209 162 217 157 aact:AA00086|5end_2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy_late_synthase_63437..63667_POSITIVE 315 286 243 131 87 aact:AA00425|5end_N-terminal_region_of_competence_protein_M_287295..287525_POSITIVE 314 220 176 60 21 aact:AA02933|5end_conserved_hypothetical_protein_(HesA/MoeB/ThiF_family_protein)_2053467..2053697_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 468 503 473 45 15 aact:AA01127|3end_energy_transducer_protein_773520..773670_POSITIVE 371 220 176 79 30 aact:AA01753|3end_conserved_hypothetical_protein_1185902..1186052_POSITIVE 350 303 261 72 26 aact:AA00337|3end_conserved_hypothetical_protein_228745..228895_POSITIVE 347 209 168 53 15 aact:AA00374|3end_short-chain_fatty_acids_transporter_253101..253251_POSITIVE 344 220 171 63 8 aact:AA01476|3end_hypothetical_protein_992261..992411_POSITIVE 333 220 171 85 25 aact:AA01861|3end_phosphomethylpyrimidine_kinase_1252107..1252257_POSITIVE 314 220 176 57 18 aact:AA02932|3end_lytic_murein_transglycosylase_A_2053544..2053694_POSITIVE 309 220 191 131 99 aact:AA02602|3end_conserved_hypothetical_protein_1814302..1814452_POSITIVE 308 229 185 50 2 aact:AA02958|3end_3-phenylpropionic_acid_transporter_2070491..2070641_POSITIVE 306 225 189 139 105 aact:AA02195|3end_oxaloacetate_decarboxylase_alpha_chain_1496374..1496524_POSITIVE 306 64 21 65 15 aact:AA00809|3end_possible_oxidoreductase_555435..555585_POSITIVE 304 499 466 108 73 aact:AA01953|3end_hypothetical_protein_1320349..1320499_POSITIVE 300 225 196 39 3 aact:AA01976|3end_colicin_V_production_protein_1337132..1337282_POSITIVE 299 219 175 130 85 aact:AA02821|3end_ribosomal-protein-alanine_acetyltransferase_1982775..1982925_POSITIVE 295 219 176 79 18 aact:AA02925|3end_conserved_hypothetical_protein_2048151..2048301_POSITIVE 294 219 176 109 54 aact:AA01083|3end_preprotein_translocase_SecA_subunit_750970..751120_POSITIVE 294 219 181 142 108 aact:AA00741|3end_possible_2-oxoglutarate/malate_transporter_508076..508226_POSITIVE 292 225 181 76 13 aact:AA01666|3end_penicillin-binding_protein_4;_D-alanyl-D-alanine_carboxypeptidase;_D-alanyl-D-alanine-endopeptidase_1129621..1129771_POSITIVE 290 395 353 89 54 aact:AA02569|3end_hypothetical_protein_1789184..1789334_POSITIVE 289 213 174 45 9 aact:AA01342|3end_conserved_hypotheticl_protein_(possible_ribosomal_RNA_adenine_dimethylase)_911085..911235_POSITIVE