Origin IGS: aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactctgttagctcgcctttccatactcctgtttttttctccatttccgtatagctaggccgacgagtagataaagaatagtcggaatcatccccactgaaagcgagaagaggaaagcttgatttttttctaccgagacaaagaatagtaatcgtaaaggatttataaccgcatcttccatagtgtgcataattaccagtggccaaactgatttagtaattctaaaaatctctgtatacatgtccgtccagcatacaacagttatcatcccgataaggaagaatgtaagccttctaaccggcaaggtattttggatttctctctcagacagaaacttcataatgtaaggcagatgccaaatccaccagataaagccaacaagtagatatagttttaaatcggataatttttatttgattaattgattagtaagatttgccctccaaacagattcttcaaaaatattttttatgaattgagttctgacctgtgttagcaagattccaagataggacgtgaactcaaccttcacacctgtcactctgattccttgtgtcatcagtcccaagagtatcactatcatcgtaacaagagggtagactaaaaaactaacaagctataatttttttgttatttttaaaattaatggaaaaaccagcctctttccagccgtctccgccaaagcttcgaagaaagatggtacagattaacggagttaccagccaaatcagcatccctaaaaaaaccacttcctatctctgttccgatattttcgtaatgagcttggccggttactttatcaacaacataaccaatccagccacatagggtgctgagaatggcaaagataatgacattgcgtttaattgtagttatggactgtttcatagcagtctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 agcttactaagacaattaagttttcaaagacctccttcttagatgaaggcaggtcttttttgttaagtaggaattccaaattactttctgtgaataaattagtatctatcccaacatctcgactaaattctccttgatattgctgaagcagtcgatgactcgaatcaacctagcttctctcaaataagagagatgaataattttttgacgaaaggagactgctatgaaacagtccataactacaattaaacgcaatgtcattatctttgccattctcagcaccctatgtggctggattggttatgttgttgataaagtaaccggccaagctcattacgaaaatatcggaacagagataggaagtggtttttttagggatgctgatttggctggtaactccgttaatctgtaccatctttcttcgaagctttggcggagacggctggaaagaggctggtttttccattaattttaaaaataacaaaaaaattatagcttgttagttttttagtctaccctcttgttacgatgatagtgatactcttgggactgatgacacaaggaatcagagtgacaggtgtgaaggttgagttcacgtcctatcttggaatcttgctaacacaggtcagaactcaattcataaaaaatatttttgaagaatctgtttggagggcaaatcttactaatcaattaatcaaataaaaattatccgatttaaaactatatctacttgttggctttatctggtggatttggcatctgccttacattatgaagtttctgtctgagagagaaatccaaaataccttgccggttagaaggcttacattcttccttatcgggatgataactgttgtatgctggacggacatgtatacagagatttttagaattactaaatcagtttggccactggtaattatgcacactatggaagatgcggttataaatcctttacgattactattctttgtctcggtagaaaaaaatcaagctttcctcttctcgctttcagtggggatgattccgactattctttatctactcgtcggcctagctatacggaaatggagaaaaaaacaggagtatggaaaggcgagctaacagagtaacaaaagatgataatgttgatttatttttctatttaatagaggtaaaaggctatcaaaagtctgtaaaaatggaaaaagttgacatttcaatgagttatgttctaattttttgtacattttcaagtttttatatatgtaaatgtcagaaaaaagtgtataatggattagtaaattaaattttaggagaggatttaatt Mask Tandem Repeat Region ================================================ aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactctgttagctcgcctttccatactcctgtttttttctccatttccgtatagctaggccgacgagtagataaagaatagtcggaatcatccccactgaaagcgagaagaggaaagcttgatttttttctaccgagacaaagaatagtaatcgtaaaggatttataaccgcatcttccatagtgtgcataattaccagtggccaaactgatttagtaattctaaaaatctctgtatacatgtccgtccagcatacaacagttatcatcccgataaggaagaatgtaagccttctaaccggcaaggtattttggatttctctctcagacagaaacttcataatgtaaggcagatgccaaatccaccagataaagccaacaagtagatatagttttaaatcggataatttttatttgattaattgattagtaagatttgccctccaaacagattcttcaaaaatattttttatgaattgagttctgacctgtgttagcaagattccaagataggacgtgaactcaaccttcacacctgtcactctgattccttgtgtcatcagtcccaagagtatcactatcatcgtaacaagagggtagactaaaaaactaacaagctataatttttttgttatttttaaaattaatggaaaaaccagcctctttccagccgtctccgccaaagcttcgaagaaagatggtacagattaacggagttaccagccaaatcagcatccctaaaaaaaccacttcctatctctgttccgatattttcgtaatgagcttggccggttactttatcaacaacataaccaatccagccacatagggtgctgagaatggcaaagataatgacattgcgtttaattgtagttatggactgtttcatagcagtctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Find is-nt database================================================ Query_seq: SSA_2094:SSA_2096|SSA_2094:SSA_2096:Conserved uncharacterized protein:ATP-dependent protease, ATP-binding subunit, putative:<-<-:2098338..2099646 1309 aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactctgttagctcgcctttccatactcctgtttttttctccatttccgtatagctaggccgacgagtagataaagaatagtcggaatcatccccactgaaagcgagaagaggaaagcttgatttttttctaccgagacaaagaatagtaatcgtaaaggatttataaccgcatcttccatagtgtgcataattaccagtggccaaactgatttagtaattctaaaaatctctgtatacatgtccgtccagcatacaacagttatcatcccgataaggaagaatgtaagccttctaaccggcaaggtattttggatttctctctcagacagaaacttcataatgtaaggcagatgccaaatccaccagataaagccaacaagtagatatagttttaaatcggataatttttatttgattaattgattagtaagatttgccctccaaacagattcttcaaaaatattttttatgaattgagttctgacctgtgttagcaagattccaagataggacgtgaactcaaccttcacacctgtcactctgattccttgtgtcatcagtcccaagagtatcactatcatcgtaacaagagggtagactaaaaaactaacaagctataatttttttgttatttttaaaattaatggaaaaaccagcctctttccagccgtctccgccaaagcttcgaagaaagatggtacagattaacggagttaccagccaaatcagcatccctaaaaaaaccacttcctatctctgttccgatattttcgtaatgagcttggccggttactttatcaacaacataaccaatccagccacatagggtgctgagaatggcaaagataatgacattgcgtttaattgtagttatggactgtttcatagcagtctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SSA_2094:SSA_2096|SSA_2094:SSA_2096:Conserved uncharacterized protein:ATP-dependent protease, ATP-binding subunit, putative:<-<-:2098338..2099646 1309 aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactctgttagctcgcctttccatactcctgtttttttctccatttccgtatagctaggccgacgagtagataaagaatagtcggaatcatccccactgaaagcgagaagaggaaagcttgatttttttctaccgagacaaagaatagtaatcgtaaaggatttataaccgcatcttccatagtgtgcataattaccagtggccaaactgatttagtaattctaaaaatctctgtatacatgtccgtccagcatacaacagttatcatcccgataaggaagaatgtaagccttctaaccggcaaggtattttggatttctctctcagacagaaacttcataatgtaaggcagatgccaaatccaccagataaagccaacaagtagatatagttttaaatcggataatttttatttgattaattgattagtaagatttgccctccaaacagattcttcaaaaatattttttatgaattgagttctgacctgtgttagcaagattccaagataggacgtgaactcaaccttcacacctgtcactctgattccttgtgtcatcagtcccaagagtatcactatcatcgtaacaagagggtagactaaaaaactaacaagctataatttttttgttatttttaaaattaatggaaaaaccagcctctttccagccgtctccgccaaagcttcgaagaaagatggtacagattaacggagttaccagccaaatcagcatccctaaaaaaaccacttcctatctctgttccgatattttcgtaatgagcttggccggttactttatcaacaacataaccaatccagccacatagggtgctgagaatggcaaagataatgacattgcgtttaattgtagttatggactgtttcatagcagtctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: SSA_2094:SSA_2096|SSA_2094:SSA_2096:Conserved uncharacterized protein:ATP-dependent protease, ATP-binding subunit, putative:<-<-:2098338..2099646 1309 aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactctgttagctcgcctttccatactcctgtttttttctccatttccgtatagctaggccgacgagtagataaagaatagtcggaatcatccccactgaaagcgagaagaggaaagcttgatttttttctaccgagacaaagaatagtaatcgtaaaggatttataaccgcatcttccatagtgtgcataattaccagtggccaaactgatttagtaattctaaaaatctctgtatacatgtccgtccagcatacaacagttatcatcccgataaggaagaatgtaagccttctaaccggcaaggtattttggatttctctctcagacagaaacttcataatgtaaggcagatgccaaatccaccagataaagccaacaagtagatatagttttaaatcggataatttttatttgattaattgattagtaagatttgccctccaaacagattcttcaaaaatattttttatgaattgagttctgacctgtgttagcaagattccaagataggacgtgaactcaaccttcacacctgtcactctgattccttgtgtcatcagtcccaagagtatcactatcatcgtaacaagagggtagactaaaaaactaacaagctataatttttttgttatttttaaaattaatggaaaaaccagcctctttccagccgtctccgccaaagcttcgaagaaagatggtacagattaacggagttaccagccaaatcagcatccctaaaaaaaccacttcctatctctgttccgatattttcgtaatgagcttggccggttactttatcaacaacataaccaatccagccacatagggtgctgagaatggcaaagataatgacattgcgtttaattgtagttatggactgtttcatagcagtctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 8 Min: 203 Max: 1092 Len: 890 Subject: UniRef90_Q467I9 Cluster: Hypothetical protein; n=1; Methanosarcina barkeri str. Fusaro|Rep: Hypothetical protein - Methanosarcina barkeri (strain Fusaro / DSM 804) HSP 1 e-value: 4.0E-43 bit: 148.0 Len: 582 Query Start:230 Query End:811 Subject Strand: null Subject Start: 81 Subject End: 272 ..................................................................................................................................................................................................................................... V S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L R L L F F V S V E K N Q A F L F S L S V G M I P T I L Y L L V G L A I R K W R K K .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................................................................................................... I A A L I F P V V T A A V L I I G V T T K W I D L S - - T F D F R P L V L V F S S T L L F N F I K N I F D G A P L H G Y L T S Q L L K L D L N D W K I Y L I V G G L W G I W H I P Y Y L I F L P E T D I Q A V L P V N R T I F S I F M T I T I V F W A V M F V E L Y R I T K S I W P G I I L H M V E D S L I N P L V I S G F I S I A A G K E I L I S P I F G I I T T I L Y L L V G L G I R A Y R K Q .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-43 bit: 40.0 Len: 114 Query Start:822 Query End:935 Subject Strand: null Subject Start: 40 Subject End: 77 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G M L I W L V T P L I C T I F L R S F G G D G W K E A G F S I N F K N N K K ...................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G M G I W L V L P M L T A V A I T I F S R G N W K D F G F K P N F K G N I K ...................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-43 bit: 32.0 Len: 69 Query Start:997 Query End:1065 Subject Strand: null Subject Start: 5 Subject End: 27 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I K R N V I I F A I L S T L C G W I G Y V V D .................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... V L R N T V V F I V L V I L S G W I G F L V D .................................................................................................................................................................................................................................................... Subject: UniRef90_Q0B073 Cluster: Hypothetical protein; n=1; Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep: Hypothetical protein - Syntrophomonas wolfei subsp. wolfei (strain Goettingen) HSP 1 e-value: 6.0E-40 bit: 152.0 Len: 606 Query Start:203 Query End:808 Subject Strand: null Subject Start: 58 Subject End: 256 .......................................................................................................................................................................................................... S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L R L L F F V S V E K N Q A F L F S L S V G M I P T I L Y L L V G L A I R K W R K K Q E Y G K A S * Q ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................... S I L I F P V V T A I V M L I G A T T N W I D L S A F A L R - - P F I V A F G S T M F V N F I I D I F E E T A W R G Y L T S Q L L K L N L N D W K L Y L I V G C V W A A W H I P Y Y L V F L P E A D I Q A V M P V S R A I Y V V V A F T T F L C W T V M F T E L F R V T K S V W P C V I L H T V E D S L I N L L V I S G Y I S I A V G K E I L V S P I N G I I A S I L Y L A V G L G I R A Y R I K - A Y G M R S D Q ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-40 bit: 37.0 Len: 117 Query Start:822 Query End:938 Subject Strand: null Subject Start: 15 Subject End: 53 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M L I W L V T P L I C T I F L R S F G G D G W K E A G F S I N F K N N K K ................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M G V W L V L P M L T A L V I I L I S R F S W K E L G L K P N F K G N V K ................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q8PRY2 Cluster: Conserved protein; n=1; Methanosarcina mazei|Rep: Conserved protein - Methanosarcina mazei (Methanosarcina frisia) HSP 1 e-value: 2.0E-39 bit: 146.0 Len: 576 Query Start:236 Query End:811 Subject Strand: null Subject Start: 71 Subject End: 260 ........................................................................................................................................................................................................................................... V S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L R L L F F V S V E K N Q A F L F S L S V G M I P T I L Y L L V G L A I R K W R .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................... I A A L V F P V V T S I V L I I G V I T D W I D L S - - T L D L R P F I L V F S S T L L F N F I K N I F D G T P L F S Y L T P K L V K L N F N D W K I Y L T V G S V W G I W H L P Y F L V F L P E T D I Q A V L P V S R A I T I I I M I I T M I L W S V M F I E L Y R V T K S I W P G V V L H M V E D S L I N P L V I S G F I S I A A G K E I L I S P I I G I I T S I L Y L L I G L G I R T Y R .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-39 bit: 41.6 Len: 114 Query Start:822 Query End:935 Subject Strand: null Subject Start: 30 Subject End: 67 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G M L I W L V T P L I C T I F L R S F G G D G W K E A G F S I N F K N N K K ...................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G M G I W L V T P M L A A I T M T I F S K G N W N D L G F K P N F K R N I K ...................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q81PI9 Cluster: CAAX amino terminal protease family protein; n=3; Bacillus cereus group|Rep: CAAX amino terminal protease family protein - Bacillus anthracis HSP 1 e-value: 3.0E-32 bit: 120.0 Len: 588 Query Start:224 Query End:811 Subject Strand: null Subject Start: 84 Subject End: 275 ............................................................................................................................................................................................................................... V S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L - R L L F F V S V E K N Q A F L F S L S V G M I P T I L Y L L V G L A I R K W R K K Q E .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................................................................................................................................................................................... V A I L I Y P F V T V I T I S L A L I F G V A N I T S F - - E I Y S L L S L I F M S T I G N F I K N I F E E F S W R G Y L T P K L I E L K L N D W F I Y I I S G L V W A L W H A A Y Y L V F L P N E Y F K S - - - I S R L H M L L S G C I L M V S W S I M Y V E I Y R L T K S V W P C V I M H A I E D A V P T V L V T I T G I I T L T N S S D F W L N P I S G V V A T I I F L G I G I V L R S I R I K K E .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 3.0E-32 bit: 36.2 Len: 117 Query Start:822 Query End:938 Subject Strand: null Subject Start: 43 Subject End: 80 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M L I W L V T P L I C T I F L R S F G G D G W K E A G F S I N F K N N K K ................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M G L W L I L P F L S C I F L R V I S R D - W N D F G I K L N L K A N F K ................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 3.0E-32 bit: 27.3 Len: 132 Query Start:961 Query End:1092 Subject Strand: null Subject Start: 2 Subject End: 44 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ T A M K Q S I T T I K R N V I I F A I L S T L C G W I G Y V V D K - V T G Q A H Y E N I G ......................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ T A I K R K - - P I K L H L L I F V F I V L A S G W I G V I L D S F L T D Q P E G N S L G ......................................................................................................................................................................................................................... Subject: UniRef90_Q2E980 Cluster: Abortive infection protein; n=1; Bacillus cereus subsp. cytotoxis NVH 391-98|Rep: Abortive infection protein - Bacillus cereus subsp. cytotoxis NVH 391-98 HSP 1 e-value: 6.0E-32 bit: 117.0 Len: 585 Query Start:224 Query End:808 Subject Strand: null Subject Start: 85 Subject End: 275 ............................................................................................................................................................................................................................... S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L R L L F F V S V E K N Q A - F L F S L S V G M I P T I L Y L L V G L A I R K W R K K Q E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................... A F S I Y P F V T L V S V G F A L C F G A A D I S - - H V E L Y S L L S I M M I S M A S N F L K N I F E E F A W R G Y L T P K L I E L K M N D W L L Y L I S G L V W A L W H S A Y Y I V F L P N H Y F E S T - - - S R V S T L L I G C V L M V C W T V M Y V E I Y R L T K S V W P C V C M H A L E D A V P T V L V T I S G V I T F T D Q G D F W L N P V S G I V A T G L F L S F G L F L R V I R I K R D ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 6.0E-32 bit: 39.3 Len: 117 Query Start:822 Query End:938 Subject Strand: null Subject Start: 43 Subject End: 80 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M L I W L V T P L I C T I F L R S F G G D G W K E A G F S I N F K N N K K ................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M G L W L V L P F F T A I F F R I I R R D - W K D M G L K L N V K N N V K ................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 6.0E-32 bit: 25.8 Len: 105 Query Start:961 Query End:1065 Subject Strand: null Subject Start: 9 Subject End: 44 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ I K R N V I I F A I L S T L C G W I G Y V V D K V - T G Q A H Y E N I G .................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ V K V H L I V F I I V V L S G G W L G V L L D S V L T D Q T E G N S L G .................................................................................................................................................................................................................................................... Subject: UniRef90_Q4MP47 Cluster: CAAX amino terminal protease family; n=2; Bacillus cereus group|Rep: CAAX amino terminal protease family - Bacillus cereus G9241 HSP 1 e-value: 5.0E-31 bit: 122.0 Len: 588 Query Start:224 Query End:811 Subject Strand: null Subject Start: 84 Subject End: 275 ............................................................................................................................................................................................................................... V S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L - R L L F F V S V E K N Q A F L F S L S V G M I P T I L Y L L V G L A I R K W R K K Q E .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................................................................................................................................................................................... V A L L I Y P C V T V I T I S L A L I F G V A N I T N F - - E M S S L F S L I L M S T I G N F I K N I F E E F S W R G Y L T P K L I E L K L N D W F I Y I I S G L V W A L W H A A Y Y L V F L P N E Y F E S - - - I S R L H M L L S G C I L M V S W S I M Y V E I Y R L T K S V W P C V I M H A I E D A V P T V L V T I T G I I T L T K G S D F W L N P I S G I V A T I V F L G I G I V L R T I R I K K E .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 5.0E-31 bit: 33.5 Len: 117 Query Start:822 Query End:938 Subject Strand: null Subject Start: 43 Subject End: 80 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M L I W L V T P L I C T I F L R S F G G D G W K E A G F S I N F K N N K K ................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M G L W L I L P F L V S I L L R I I S R D - W N D F G I K L N L N G N F K ................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 5.0E-31 bit: 24.3 Len: 132 Query Start:961 Query End:1092 Subject Strand: null Subject Start: 2 Subject End: 44 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ T A M K Q S I T T I K R N V I I F A I L S T L C G W I G Y V V D K - V T G Q A H Y E N I G ......................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ T A T K R N - - P L K L H L L I F M F I V L A S G W I G V F L D S L L T D Q P E G N S L G ......................................................................................................................................................................................................................... Subject: UniRef90_Q81CF6 Cluster: CAAX amino terminal protease family; n=1; Bacillus cereus ATCC 14579|Rep: CAAX amino terminal protease family - Bacillus cereus (strain ATCC 14579 / DSM 31) HSP 1 e-value: 5.0E-30 bit: 120.0 Len: 585 Query Start:224 Query End:808 Subject Strand: null Subject Start: 85 Subject End: 275 ............................................................................................................................................................................................................................... S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L - R L L F F V S V E K N Q A F L F S L S V G M I P T I L Y L L V G L A I R K W R K K Q E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................... A L L I Y P F V T V I T I S I S L I F G V A H I S S F D I - - S T L L S L I V M S S I G N F I K N I F E E F S W R G Y L T P K L I E L N L N D W Y I Y I I S G F I W A L W H A V Y Y I V F L P N E Y F E S - - - I S R L N M L L S G C I L M V C W S I M Y V E I Y R L T K S V W P C V I M H A I E D A V P T V L V T L T G I I T L T N S S D F W L N P I S G V A A T V L F L G I G I V L R T I R I K R E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 5.0E-30 bit: 33.1 Len: 111 Query Start:828 Query End:938 Subject Strand: null Subject Start: 43 Subject End: 78 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M L I W L V T P L I C T I F L R S F G G D G W K E A G F S I N F K N N ................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L G M G L W L I L P F L V S I L L R V I S R D - W N D F G I K S N L K G N ................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 5.0E-30 bit: 22.3 Len: 108 Query Start:961 Query End:1068 Subject Strand: null Subject Start: 8 Subject End: 44 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ T I K R N V I I F A I L S T L C G W I G Y V V D K - V T G Q A H Y E N I G ................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ S L K L Y L L I F V F T V L A S G W I G V F L D S L L T N Q P E G N T L G ................................................................................................................................................................................................................................................. Subject: UniRef90_Q0YQP1 Cluster: Abortive infection protein; n=1; Chlorobium ferrooxidans DSM 13031|Rep: Abortive infection protein - Chlorobium ferrooxidans DSM 13031 HSP 1 e-value: 6.0E-27 bit: 93.2 Len: 579 Query Start:233 Query End:811 Subject Strand: null Subject Start: 87 Subject End: 281 ........................................................................................................................................................................................................................................ V S F L V Y P L V T M I V I L L G L M T Q G I R V T G V K V E F T S - Y L G I L L T Q V R T Q F I K N I F E E S V W R A N L T N Q X X X X X X X X X X X X X L V G F I W W I W H L P Y I M K F L S E R E I Q N T L P V R R L T F F L I G M I T V V C W T D M Y T E I F R I T K S V W P L V I M H T M E D A V I N P L R L L F F V S V E K N Q A F L F S L S V G M I P T I - L Y L L V G L A I R K W R K .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................ L A L V L F P L S A A L I L C I G M V T G L T T L P D L S S A G A A V F L H L F L V T L A P S F V K N I F E E F A W R G Y L A P R L S S L G V H D L A G H L L V G V V W A A W H I P Y Y L F F L D R A S F T A Y S S Q G P M L F F F M L F A G V I A M S L V Y G E I R L L T G S V W P L L L L H T V S N A V G N P L L L H D F I R I A P G A D I V V S P A P G S I V S I V L N C A V G F G L Y R F R K .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 6.0E-27 bit: 45.4 Len: 90 Query Start:849 Query End:938 Subject Strand: null Subject Start: 45 Subject End: 74 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ L G M L I W L V T P L I C T I F L R S F G G D G W K E A G F ................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ V G Q L L W I A A P L L T A L L L R R F G G D G W K D F G F ................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 6.0E-27 bit: 27.3 Len: 99 Query Start:985 Query End:1083 Subject Strand: null Subject Start: 5 Subject End: 37 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ K Q S I T T I K R N V I I F A I L S T L C G W I G Y V V D K V T G .................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ R Q S K R S T I R N L W I F A F I A L S I G W I G R G L N V V S G .................................................................................................................................................................................................................................. aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagctataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaccacttcctatctctgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Predict ORF larger than 30AA ================================================ Protein_Len: 58 Strand: + Start: 33 End: 206 ................................ M H Y T L F S D I Y I Y K N L K M Y K K L E H N S L K C Q L F P F L Q T F D S L L P L L N R K I N Q H Y H L L L L C ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 363 End: 542 .......................................................................................................................................................................................................................................................................................................................................................................... M T A S S I V C I I T S G Q T D L V I L K I S V Y M S V Q H T T V I I P I R K N V S L L T G K V F W I S L S D R N F I M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 49 Strand: + Start: 434 End: 580 ................................................................................................................................................................................................................................................................................................................................................................................................................................................. M H V R P A Y N S Y H P D K E E C K P S N R Q G I L D F S L R Q K L H N V R Q M P N P P D K A N K ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 707 End: 799 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M G R E L N L H T C H S D S L C H Q S Q E Y H Y H R N K R V D .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 817 End: 1023 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M I F L L F L K L M E K P A S F Q P S P P K L R R K M V Q I N G V T S Q I S I P K K T T S Y L C S D I F V M S L A G Y F .............................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 1013 End: 1201 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q P H R V L R M A K I M T L R L I V V M D C F I A V S F R Q K I I H L S Y L R E A R L I R V I D C F S N I K E N L V E ............................................................................................................ Protein_Len: 50 Strand: + Start: 1159 End: 1308 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M L Q Q Y Q G E F S R D V G I D T N L F T E S N L E F L L N K K D L P S S K K E V F E N L I V L V S . Protein_Len: 40 Strand: - Start: 1176 End: 1295 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... P S N L R S T P I S V L K N V S L L K S N R S L L F S R G E D L F S T K S F K M .............. Protein_Len: 40 Strand: - Start: 1064 End: 1183 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... N Y N H V T E Y C D G K T L F N N M E R I Q S F S P Q N S D D V A E A I D L L M .............................................................................................................................. Protein_Len: 60 Strand: - Start: 844 End: 1086 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... V S N G A L D A D R F F G S G I E T G I N E Y H A Q G T V K D V V Y G I W G C L T S L I A F I I V N R K I T T I S Q K M ............................................................................................................................................................................................................................... Protein_Len: 46 Strand: - Start: 810 End: 947 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... C A I I K K N N K F N I S F G A E K W G D G G F S R L F I T C I L P T V L W I L M G L F V M .......................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: - Start: 611 End: 781 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. K I L Q N T L N A R W V S E E F I N K I F Q T R V Q T L L I G L Y S T F E V K V G T V R I G Q T M L G L L I V I M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 32 Strand: - Start: 525 End: 620 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ V S V E Y H L A S A L D V L Y L W C T S I T K F R I I K I Q N M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 209 End: 568 ................................................................................................................................................................................................................ I V L P W V S K T I R F I E T Y M D T W C V V T I M G I L F F T L R R V P L T N Q I E R E S L F K M I Y P L H W I W W M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 201 End: 410 ........................................................................................................................................................................................................ K K E M E T Y S P R R T S L S Y D S D D G S F A L L P F S S K K R G L C L I T I T F S K Y G C R G Y H A Y N G T A L S M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 25 End: 222 ........................ V K K Q C K C I Y F S S F T C F I L V Y S M S I D V K E M K V S K Q Y G K V E I L Y F F L D V N D D K T V R N A R R E M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagctataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaccacttcctatctctgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagctataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaccacttcctatctctgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: SSA_2094:SSA_2096|SSA_2094:SSA_2096:Conserved uncharacterized protein:ATP-dependent protease, ATP-binding subunit, putative:<-<-:2098338..2099646 1309 aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagctataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaccacttcctatctctgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct Intra-Species Hit: Count: 1 Min: 1 Max: 1309 Len: 1309 Subject: NC_009009_SSA_2094_SSA_2096|Conserved uncharacterized protein:ATP-dependent protease, ATP-binding subunit, putative|NEGATIVE:NEGATIVE|[2098338,2099646]|1309 HSP 1 e-value: 1.0E-119 bit: 430.0 Len: 217 Query Start:1093 Query End:1309 Subject Strand: POSITIVE Subject Start: 1093 Subject End: 1309 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ctcctttcgtcaaaaaattattcatctctcttatttgagagaagctaggttgattcgagtcatcgactgcttcagcaatatcaaggagaatttagtcgagatgttgggatagatactaatttattcacagaaagtaatttggaattcctacttaacaaaaaagacctgccttcatctaagaaggaggtctttgaaaacttaattgtcttagtaagct HSP 2 e-value: 1.0E-110 bit: 400.0 Len: 202 Query Start:1 Query End:202 Subject Strand: POSITIVE Subject Start: 1 Subject End: 202 aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttact................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... aattaaatcctctcctaaaatttaatttactaatccattatacacttttttctgacatttacatatataaaaacttgaaaatgtacaaaaaattagaacataactcattgaaatgtcaactttttccatttttacagacttttgatagccttttacctctattaaatagaaaaataaatcaacattatcatcttttgttact................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAUUAAAUCCUCUCCUAAAAUUUAAUUUACUAAUCCAUUAUACACUUUUUUCUGACAUUUACAUAUAUAAAAACUUGAAAAUGUACAAAAAAUUAGAACAUAACUCAUUGAAAUGUCAACUUUUUCCAUUUUUACAGACUUUUGAUAGCCUUUUACCUCUAUUAAAUAGAAAAAUAAAUCAACAUUAUCAUCUUUUGUUACUCUGUUAGCUCGCCUUUCCAUACUCCUGUUUUUUUCUCCAUUUCCGUAUAGCUAGGCCGACGAGUAGAUAAAGAAUAGUCGGAAUCAUCCCCACUGAAAGCGAGAAGAGGAAAGCUUGAUUUUUUUCUACCGAGACAAAGAAUAGUAAUCGUAAAGGAUUUAUAACCGCAUCUUCCAUAGUGUGCAUAAUUACCAGUGGCCAAACUGAUUUAGUAAUUCUAAAAAUCUCUGUAUACAUGUCCGUCCAGCAUACAACAGUUAUCAUCCCGAUAAGGAAGAAUGUAAGCCUUCUAACCGGCAAGGUAUUUUGGAUUUCUCUCUCAGACAGAAACUUCAUAAUGUAAGGCAGAUGCCAAAUCCACCAGAUAAAGCCAACAAGUAGAUAUAGUUUUAAAUCGGAUAAUUUUUAUUUGAUUAAUUGAUUAGUAAGAUUUGCCCUCCAAACAGAUUCUUCAAAAAUAUUUUUUAUGAAUUGAGUUCUGACCUGUGUUAGCAAGAUUCCAAGAUAGGACGUGAACUCAACCUUCACACCUGUCACUCUGAUUCCUUGUGUCAUCAGUCCCAAGAGUAUCACUAUCAUCGUAACAAGAGGGUAGACUAAAAAACUAACAAGCUAUAAUUUUUUUGUUAUUUUUAAAAUUAAUGGAAAAACCAGCCUCUUUCCAGCCGUCUCCGCCAAAGCUUCGAAGAAAGAUGGUACAGAUUAACGGAGUUACCAGCCAAAUCAGCAUCCCUAAAAAAACCACUUCCUAUCUCUGUUCCGAUAUUUUCGUAAUGAGCUUGGCCGGUUACUUUAUCAACAACAUAACCAAUCCAGCCACAUAGGGUGCUGAGAAUGGCAAAGAUAAUGACAUUGCGUUUAAUUGUAGUUAUGGACUGUUUCAUAGCAGUCUCCUUUCGUCAAAAAAUUAUUCAUCUCUCUUAUUUGAGAGAAGCUAGGUUGAUUCGAGUCAUCGACUGCUUCAGCAAUAUCAAGGAGAAUUUAGUCGAGAUGUUGGGAUAGAUACUAAUUUAUUCACAGAAAGUAAUUUGGAAUUCCUACUUAACAAAAAAGACCUGCCUUCAUCUAAGAAGGAGGUCUUUGAAAACUUAAUUGUCUUAGUAAGCU .........................((((((((((((...(((.....((((((((((((.((............)).)))))).....(((((((..(((((((((...(((((.(((........((((((.......((((((((..........))))))))...)))))).......(((((((.......((.((((((((((.((......((((...................((((((...((((.(((.((((.((..........((((.((.......)).)))).....(..((((((..((((((.......((((((((.((........))..)))....((.(((((....(((((((((...((((((........((((......)))).(((((.....)))))........................)))))).....(((((.....)))))))))).))))..(((........)))..(((..(((((...(((.(((...(((............))).))).)))..)))))...)))..))))).)).....)))))..(((((((.(((((((((.....)))))))))............((.(((((((((....(((((((((((.(((.....))).))))..))).))))....(((.(((....((((...((((((..(((((.......))))).))))))...(((((..(....)..)))))......))))....))).)))........)))))))))))..))))))).))))))....((((((..(((..........)))..))))))....))))))..).))))))...)))..)))).))..)))).))))....)))))))))))).))..((((..((((((.(((((.................(((.(((.(((.....))).))))))..((((.((.....((((.......)))).....)).))))..)))))))))))...))))...)))))))...))))))))...)).)))))))(((((((....)))))))((((..((((........((((.((((((......)))))).(((((((....((((....))))..)))).)))...........))))........))))..))))......))))))).....)))))))))...))))................((((((((.(((((......)))))))))))))...............)))))))).. (-291.94) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AGCUUACUAAGACAAUUAAGUUUUCAAAGACCUCCUUCUUAGAUGAAGGCAGGUCUUUUUUGUUAAGUAGGAAUUCCAAAUUACUUUCUGUGAAUAAAUUAGUAUCUAUCCCAACAUCUCGACUAAAUUCUCCUUGAUAUUGCUGAAGCAGUCGAUGACUCGAAUCAACCUAGCUUCUCUCAAAUAAGAGAGAUGAAUAAUUUUUUGACGAAAGGAGACUGCUAUGAAACAGUCCAUAACUACAAUUAAACGCAAUGUCAUUAUCUUUGCCAUUCUCAGCACCCUAUGUGGCUGGAUUGGUUAUGUUGUUGAUAAAGUAACCGGCCAAGCUCAUUACGAAAAUAUCGGAACAGAGAUAGGAAGUGGUUUUUUUAGGGAUGCUGAUUUGGCUGGUAACUCCGUUAAUCUGUACCAUCUUUCUUCGAAGCUUUGGCGGAGACGGCUGGAAAGAGGCUGGUUUUUCCAUUAAUUUUAAAAAUAACAAAAAAAUUAUAGCUUGUUAGUUUUUUAGUCUACCCUCUUGUUACGAUGAUAGUGAUACUCUUGGGACUGAUGACACAAGGAAUCAGAGUGACAGGUGUGAAGGUUGAGUUCACGUCCUAUCUUGGAAUCUUGCUAACACAGGUCAGAACUCAAUUCAUAAAAAAUAUUUUUGAAGAAUCUGUUUGGAGGGCAAAUCUUACUAAUCAAUUAAUCAAAUAAAAAUUAUCCGAUUUAAAACUAUAUCUACUUGUUGGCUUUAUCUGGUGGAUUUGGCAUCUGCCUUACAUUAUGAAGUUUCUGUCUGAGAGAGAAAUCCAAAAUACCUUGCCGGUUAGAAGGCUUACAUUCUUCCUUAUCGGGAUGAUAACUGUUGUAUGCUGGACGGACAUGUAUACAGAGAUUUUUAGAAUUACUAAAUCAGUUUGGCCACUGGUAAUUAUGCACACUAUGGAAGAUGCGGUUAUAAAUCCUUUACGAUUACUAUUCUUUGUCUCGGUAGAAAAAAAUCAAGCUUUCCUCUUCUCGCUUUCAGUGGGGAUGAUUCCGACUAUUCUUUAUCUACUCGUCGGCCUAGCUAUACGGAAAUGGAGAAAAAAACAGGAGUAUGGAAAGGCGAGCUAACAGAGUAACAAAAGAUGAUAAUGUUGAUUUAUUUUUCUAUUUAAUAGAGGUAAAAGGCUAUCAAAAGUCUGUAAAAAUGGAAAAAGUUGACAUUUCAAUGAGUUAUGUUCUAAUUUUUUGUACAUUUUCAAGUUUUUAUAUAUGUAAAUGUCAGAAAAAAGUGUAUAAUGGAUUAGUAAAUUAAAUUUUAGGAGAGGAUUUAAUU ..((((((..(((((..........(((((((((((((......))))).)))))))).))))).))))))...(((...((((.....)))).....(((((..................)))))..(((((((((((((((...(((((((......(((((.........(.((((((......)))))).)........)))))(....)..))))))).......(((.....)))..........)))))))))........((((...(((((((((((...((((((.((((((((.(((....))).)))))))))).)))).(((((.....((((........))))....))))).....))))).))))))..))))..(((((((.((((.(((((.(((.((.((((((.........)))))).)).))).....((((.((((((((((...(((((((((((...(((((((((........))))))))).(((..(((...((((((.......)))))).....))).(((((..(....)..)))))...)))...(((((..(((((((((...(((......)))..((((......))))...)))))))))))))).....)))))))))))..((((((((((((((.....................................((((((.(((..(((((.(((((.((((((..((((..(....(((....)))............((((((.((...)).))))))..........)..))))....)))))).))).......(((((((......(((((.(((((((((......)).)))))))......(((((.....))))).)))))......))))))).............)).)))))..))).))))))......((((....((((..........))))...))))..)))))))..(((((..((((.(((.((......(((((................))))).....)).))).))))..)))))..)))))))...)))))))))).)))).))))).))))......(((.(((((..((...(((((((((((.(((((((((......)))).....)))))..)))))))))))))..))))))))..)))))))...((((((..(((((((((((....((((.((((......)))).)))).)))))))))))..)))))).............)))))))))....... (-326.09) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 709 140 91 231 182 NC_009009:SSA_2094|5end_Conserved_uncharacterized_protein_2098247..2098477_NEGATIVE 420 900 853 151 102 NC_009009:SSA_0620|5end_hypothetical_protein_612325..612555_NEGATIVE 392 878 845 64 28 NC_009009:SSA_0323|5end_Flavoprotein,_putative_316799..317029_NEGATIVE 381 898 854 153 95 NC_009009:SSA_0834|5end_Accessory_secretory_protein_Asp2,_putative_819510..819740_POSITIVE 373 888 845 184 132 NC_009009:SSA_1414|5end_hypothetical_protein_1425412..1425642_NEGATIVE 366 888 845 147 93 NC_009009:SSA_0977|5end_3-isopropylmalate_dehydrogenase,_putative_982771..983001_POSITIVE 351 1019 973 229 176 NC_009009:SSA_0672|5end_hypothetical_protein_655191..655421_POSITIVE 349 1048 1009 83 41 NC_009009:SSA_2056|5end_Cinnamoyl_ester_hydrolase,_putative_2058587..2058817_POSITIVE 346 1168 1121 186 137 NC_009009:SSA_0633|5end_Anthranilate_synthase_component_II,_putative_622813..623043_POSITIVE 341 936 893 50 7 NC_009009:SSA_1239|5end_hypothetical_protein_1264689..1264919_NEGATIVE 339 1180 1135 190 141 NC_009009:SSA_1463|5end_Shikimate_kinase,_putative_1470240..1470470_NEGATIVE 338 259 211 127 74 NC_009009:SSA_2161|5end_NTP_pyrophosphohydrolases_including_oxidative_damage_repair_enzymes,_putative_2160600..2160830_NEGATIVE 337 890 845 142 77 NC_009009:SSA_0343|5end_DNA-damage-inducible_protein_P,_putative_337525..337755_POSITIVE 335 898 852 65 11 NC_009009:SSA_1452|5end_Second_subunit_of_major_exonuclease,_putative_1459696..1459926_NEGATIVE 333 316 279 159 116 NC_009009:SSA_1323|5end_hypothetical_protein_1340450..1340680_NEGATIVE 331 899 853 75 11 NC_009009:SSA_0629|5end_hypothetical_protein_618967..619197_POSITIVE 329 897 853 137 78 NC_009009:SSA_0051|5end_Dihydroxyacetone_kinase_phosphotransfer_protein,_putative_55190..55420_POSITIVE 326 248 202 91 33 NC_009009:SSA_1432|5end_HflX_GTPase,_putative_1439901..1440131_NEGATIVE 325 889 855 203 161 NC_009009:SSA_0239|5end_7,8-dihydro-8-oxoguanine-triphosphatase,_putative_232961..233191_POSITIVE 325 887 857 68 25 NC_009009:SSA_0183|5end_hypothetical_protein_187646..187876_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 388 893 852 133 103 NC_009009:SSA_1960|3end_hypothetical_protein_1956571..1956721_NEGATIVE 370 888 846 59 13 NC_009009:SSA_0621|3end_SOS_responce_UmuC_protein,_putative_612322..612472_NEGATIVE 366 888 845 65 11 NC_009009:SSA_0975|3end_2-isopropylmalate_synthase,_putative_982769..982919_POSITIVE 361 891 854 148 105 NC_009009:SSA_0833|3end_Accessory_secretory_protein_Asp1,_putative_819600..819750_POSITIVE 342 989 944 49 2 NC_009009:SSA_1510|3end_Rhamnosyltransferase,_putative_1514188..1514338_NEGATIVE 331 899 853 88 24 NC_009009:SSA_0628|3end_Fe-S-cluster_redox_enzyme/radical_SAM_enzyme,_Cfr_family,_putative_619060..619210_POSITIVE 330 566 521 55 1 NC_009009:SSA_1051|3end_Spermidine/putrescine_ABC_transporter,_spermidine/putrescine-binding_protein,_putative_1066808..1066958_POSITIVE 330 260 211 121 56 NC_009009:SSA_0379|3end_PTS_system,_beta-glucoside-specific_EII_component,_putative_370833..370983_POSITIVE 329 897 853 137 78 NC_009009:SSA_0050|3end_Dihydroxyacetone_kinase,_phosphatase_domain_(Dak2),_putative_55270..55420_POSITIVE 326 248 202 59 1 NC_009009:SSA_1433|3end_tRNA_delta(2)-isopentenylpyrophosphate_transferase,_putative_1439933..1440083_NEGATIVE 324 787 752 42 3 NC_009009:SSA_1710|3end_Transcriptional_regulator,_XRE_family,_putative_1699011..1699161_POSITIVE 323 899 851 88 41 NC_009009:SSA_1430|3end_Ribonuclease_Z,_putative_1437107..1437257_NEGATIVE 319 887 853 148 106 NC_009009:SSA_2228|3end_Acetyltransferase_(GNAT)_family,_putative_2228271..2228421_NEGATIVE 318 769 724 111 51 NC_009009:SSA_1015|3end_4-hydroxybenzoate_octaprenyltransferase,_putative_1019682..1019832_POSITIVE 317 1103 1065 146 110 NC_009009:SSA_1449|3end_Histidinol-phosphate/aromatic_aminotransferase_and_cobyric_acid_decarboxylase,_putative_1450873..1451023_NEGATIVE 314 907 864 93 50 NC_009009:SSA_0986|3end_Choline_transporter,_putative_989081..989231_POSITIVE 313 898 854 76 26 NC_009009:SSA_0435|3end_Urocanate_hydratase,_putative_436689..436839_NEGATIVE 310 887 845 145 110 NC_009009:SSA_1174|3end_Dihydrolipoamide_dehydrogenase,_putative_1201148..1201298_NEGATIVE 307 776 732 95 52 NC_009009:SSA_0585|3end_hypothetical_protein_577286..577436_POSITIVE 305 887 849 142 103 NC_009009:SSA_2340|3end_hypothetical_protein_2341539..2341689_NEGATIVE