Origin IGS: aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacaataatcactaatgttaaagaatttcatctagccaaacaactaaaaaataagtatgatgaggaggaaaagataatgttaggaaaacaattgaagtttatacgggagcaaagaggatatagccaagctcagattgcagaatcattaggaacgactcggcagaccatctcgaactgggaaaatgataagacgattctagatagtgcaagtcttattcgtctagccgatttttaccagatttcattagatgagctatgtggtcgaaaagctttatctatctccaaagattcgagcataaaatcaatgattttgacaaatgcctgtacactttggacttgctttgtttcatctctcggatagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgttttactatttttatttatctctcgcaattctatttgaaattgccgccacaagtcttttaaaactatctcaaggtttttcgaaactatttttcggttgccttgctttgatgttttatggcttgtgctttttctttttatctctatctttaaagggcattcagttaaatctagcttacgctatttggtctgcaataggtctagtagggacaacgatattatctattctgctttggcacgaaaaagtaacagctgtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 tctctagtgagtcttttgtgataagttcaataaaacaagtccgacaataactagacttatccctaaaaggcttacagctgttactttttcgtgccaaagcagaatagataatatcgttgtccctactagacctattgcagaccaaatagcgtaagctagatttaactgaatgccctttaaagatagagataaaaagaaaaagcacaagccataaaacatcaaagcaaggcaaccgaaaaatagtttcgaaaaaccttgagatagttttaaaagacttgtggcggcaatttcaaatagaattgcgagagataaataaaaatagtaaaacattgttttcctcctaatattctaaataactaaaaagttagcaggaaaatcaatagagctatccgagagatgaaacaaagcaagtccaaagtgtacaggcatttgtcaaaatcattgattttatgctcgaatctttggagatagataaagcttttcgaccacatagctcatctaatgaaatctggtaaaaatcggctagacgaataagacttgcactatctagaatcgtcttatcattttcccagttcgagatggtctgccgagtcgttcctaatgattctgcaatctgagcttggctatatcctctttgctcccgtataaacttcaattgttttcctaacattatcttttcctcctcatcatacttattttttagttgtttggctagatgaaattctttaacattagtgattattgtaggtaaaaattctttgacatggctattataacatgatttacgttcatcttaaaatacttgcctatctaaaatacttgatacatctatcaaccatttgctcaaaaaatcctcagtaaaaaagactgggacaaaattgtctcagtctaaatttatcatgttcaaaagttctggatgcaggagctacttatcttt Mask Tandem Repeat Region ================================================ aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacaataatcactaatgttaaagaatttcatctagccaaacaactaaaaaataagtatgatgaggaggaaaagataatgttaggaaaacaattgaagtttatacgggagcaaagaggatatagccaagctcagattgcagaatcattaggaacgactcggcagaccatctcgaactgggaaaatgataagacgattctagatagtgcaagtcttattcgtctagccgatttttaccagatttcattagatgagctatgtggtcgaaaagctttatctatctccaaagattcgagcataaaatcaatgattttgacaaatgcctgtacactttggacttgctttgtttcatctctcggatagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgttttactatttttatttatctctcgcaattctatttgaaattgccgccacaagtcttttaaaactatctcaaggtttttcgaaactatttttcggttgccttgctttgatgttttatggcttgtgctttttctttttatctctatctttaaagggcattcagttaaatctagcttacgctatttggtctgcaataggtctagtagggacaacgatattatctattctgctttggcacgaaaaagtaacagctgtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Find is-nt database================================================ Query_seq: SSA_0956:SSA_0957|SSA_0956:SSA_0957:surface protein D:Dehydrogenase, putative:->->:965479..966415 937 aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacaataatcactaatgttaaagaatttcatctagccaaacaactaaaaaataagtatgatgaggaggaaaagataatgttaggaaaacaattgaagtttatacgggagcaaagaggatatagccaagctcagattgcagaatcattaggaacgactcggcagaccatctcgaactgggaaaatgataagacgattctagatagtgcaagtcttattcgtctagccgatttttaccagatttcattagatgagctatgtggtcgaaaagctttatctatctccaaagattcgagcataaaatcaatgattttgacaaatgcctgtacactttggacttgctttgtttcatctctcggatagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgttttactatttttatttatctctcgcaattctatttgaaattgccgccacaagtcttttaaaactatctcaaggtttttcgaaactatttttcggttgccttgctttgatgttttatggcttgtgctttttctttttatctctatctttaaagggcattcagttaaatctagcttacgctatttggtctgcaataggtctagtagggacaacgatattatctattctgctttggcacgaaaaagtaacagctgtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: SSA_0956:SSA_0957|SSA_0956:SSA_0957:surface protein D:Dehydrogenase, putative:->->:965479..966415 937 aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacaataatcactaatgttaaagaatttcatctagccaaacaactaaaaaataagtatgatgaggaggaaaagataatgttaggaaaacaattgaagtttatacgggagcaaagaggatatagccaagctcagattgcagaatcattaggaacgactcggcagaccatctcgaactgggaaaatgataagacgattctagatagtgcaagtcttattcgtctagccgatttttaccagatttcattagatgagctatgtggtcgaaaagctttatctatctccaaagattcgagcataaaatcaatgattttgacaaatgcctgtacactttggacttgctttgtttcatctctcggatagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgttttactatttttatttatctctcgcaattctatttgaaattgccgccacaagtcttttaaaactatctcaaggtttttcgaaactatttttcggttgccttgctttgatgttttatggcttgtgctttttctttttatctctatctttaaagggcattcagttaaatctagcttacgctatttggtctgcaataggtctagtagggacaacgatattatctattctgctttggcacgaaaaagtaacagctgtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Intra-Species Hit: Count: 0 Inter-species Hit: Count: 5 Min: 614 Max: 862 Len: 249 Subject: gi|17158104|ref|NP_478073.1| QacEdelta1 protein [Corynebacterium glutamicum] HSP 1 e-value: 2.0E-13 bit: 73.2 Len: 246 Query Start:617 Query End:862 Subject Strand: null Subject Start: 4 Subject End: 85 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Y F Y L S L A I L F E I A A T S L L K L S Q G F S K L F F G C L A L M F Y G L C F F F L S L S L K G I Q L N L A Y A I W S A I G L V G T T I L S I L L W H E K V T A ........................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ W L F L V I A I V G E V I A T S A L K S S E G F T K L A P S A V V I I G Y G I A F Y F L S L V L K S I P V G V A Y A V W S G L G V V I I T A I A W L L H G Q K L D A ........................................................................... Subject: gi|32455551|ref|NP_862307.1| ethidium bromide resistance protein QacEdelta1 [Corynebacterium glutamicum] HSP 1 e-value: 2.0E-13 bit: 73.2 Len: 246 Query Start:617 Query End:862 Subject Strand: null Subject Start: 4 Subject End: 85 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Y F Y L S L A I L F E I A A T S L L K L S Q G F S K L F F G C L A L M F Y G L C F F F L S L S L K G I Q L N L A Y A I W S A I G L V G T T I L S I L L W H E K V T A ........................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ W L F L V I A I V G E V I A T S A L K S S E G F T K L A P S A V V I I G Y G I A F Y F L S L V L K S I P V G V A Y A V W S G L G V V I I T A I A W L L H G Q K L D A ........................................................................... Subject: gi|89108440|ref|AP_002220.1| multidrug efflux system transporter [Escherichia coli W3110] HSP 1 e-value: 3.0E-9 bit: 59.3 Len: 234 Query Start:623 Query End:856 Subject Strand: null Subject Start: 11 Subject End: 88 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Y L S L A I L F E I A A T S L L K L S Q G F S K L F F G C L A L M F Y G L C F F F L S L S L K G I Q L N L A Y A I W S A I G L V G T T I L S I L L W H E K V ................................................................................. .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. W L A L A I V L E I V A N V F L K F S D G F R R K I F G L L S L A A V L A A F S A L S Q A V K G I D L S V A Y A L W G G F G I A A T L A A G W I L F G Q R L ................................................................................. Subject: gi|89107408|ref|AP_001188.1| multidrug resistance protein [Escherichia coli W3110] HSP 1 e-value: 4.0E-9 bit: 58.9 Len: 228 Query Start:617 Query End:844 Subject Strand: null Subject Start: 4 Subject End: 76 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Y F Y L S L A I L F E I A A T S L L K L S Q G F S K L F F G C L A L M F Y G L C F F F L S L S L K G I Q L N L A Y A I W S A I G L V G T T I L S I L L W ............................................................................................. ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Y I Y L G G A I L A E V I G T T L M K F S E G F T R L W P S V G T I I C Y C A S F W L L A Q T L A Y I P T G I A Y A I W S G V G I V - - - L I S L L S W ............................................................................................. Subject: gi|89108441|ref|AP_002221.1| multidrug efflux system transporter [Escherichia coli W3110] HSP 1 e-value: 4.0E-7 bit: 52.4 Len: 246 Query Start:614 Query End:859 Subject Strand: null Subject Start: 4 Subject End: 85 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Y Y F Y L S L A I L F E I A A T S L L K - - - L S Q G F S K L F F G C L A L M F Y G L C F F F L S L S L K G I Q L N L A Y A I W S A I G L V G T T I L S I L L W H E K V T .............................................................................. ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Y W I L L G L A I A T E I T G T L S M K W A S V S E G N G G F I - - - L M L V M I S L S Y I F L S F A V K K I A L G V A Y A L W E G I G I L F I T L F S V L L F D E S L S .............................................................................. Find nr database================================================ Query_seq: SSA_0956:SSA_0957|SSA_0956:SSA_0957:surface protein D:Dehydrogenase, putative:->->:965479..966415 937 aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacaataatcactaatgttaaagaatttcatctagccaaacaactaaaaaataagtatgatgaggaggaaaagataatgttaggaaaacaattgaagtttatacgggagcaaagaggatatagccaagctcagattgcagaatcattaggaacgactcggcagaccatctcgaactgggaaaatgataagacgattctagatagtgcaagtcttattcgtctagccgatttttaccagatttcattagatgagctatgtggtcgaaaagctttatctatctccaaagattcgagcataaaatcaatgattttgacaaatgcctgtacactttggacttgctttgtttcatctctcggatagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Intra-Species Hit: Count: 0 Inter-species Hit: Count: 34 Min: 196 Max: 549 Len: 354 Subject: UniRef90_A0RCH8 Cluster: Hypothetical protein; n=2; Bacillus cereus group|Rep: Hypothetical protein - Bacillus thuringiensis (strain Al Hakam) HSP 1 e-value: 1.0E-9 bit: 66.6 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L G E Q L K K L R E S K G F S Q E D V A K K I G V T R Q A V Y K W E N D K S C P D I D N L I L L S E M Y N V T L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q6GD98 Cluster: Putative membrane protein; n=1; Staphylococcus aureus subsp. aureus MRSA252|Rep: Putative membrane protein - Staphylococcus aureus (strain MRSA252) HSP 1 e-value: 5.0E-9 bit: 64.7 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L S K Q I K K Y R E R D G Y S Q E Y L A E K L Y V S R Q S I S N W E N D K S L P D I H N L L M M C D L F N V T L D D L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q4MUK9 Cluster: Transcriptional regulator, Cro/CI family; n=1; Bacillus cereus G9241|Rep: Transcriptional regulator, Cro/CI family - Bacillus cereus G9241 HSP 1 e-value: 6.0E-9 bit: 64.3 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L G E L L K K L R E S K G F S Q G D V A K K I G V T R Q A V Y K W E N D K S Y P D I D N L I L L S E M Y N V T L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1YCM8 Cluster: Helix-turn-helix motif; n=10; Staphylococcus aureus|Rep: Helix-turn-helix motif - Staphylococcus aureus subsp. aureus JH1 HSP 1 e-value: 1.0E-8 bit: 63.2 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L S K Q I K K Y R E R D G Y S Q E Y L A E K L Y V S R Q S I S N W E N D K S L P D I H N L L M M C E L F N V T L D D L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q73AA1 Cluster: DNA-binding protein; n=1; Bacillus cereus ATCC 10987|Rep: DNA-binding protein - Bacillus cereus (strain ATCC 10987) HSP 1 e-value: 2.0E-8 bit: 62.8 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L G E Q L K K L R E S K G F S Q E D V A K K I G V T R Q A I Y R W E N N K S Y P D I D N L I L L S E M Y N V T L D A L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A1HR30 Cluster: Putative prophage repressor; n=1; Thermosinus carboxydivorans Nor1|Rep: Putative prophage repressor - Thermosinus carboxydivorans Nor1 HSP 1 e-value: 3.0E-8 bit: 62.0 Len: 189 Query Start:268 Query End:456 Subject Strand: null Subject Start: 1 Subject End: 63 ........................................................................................................................................................................................................................................................................... M L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................... M L G E R L K S L R E Q K G I T Q Q E M A D I L G I A R G T Y A H Y E I D R R E P D N A T L S R L A D F F G V S V D Y L L G R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q8DVR5 Cluster: Putative transcriptional regulator; n=1; Streptococcus mutans|Rep: Putative transcriptional regulator - Streptococcus mutans HSP 1 e-value: 4.0E-8 bit: 61.6 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. I G E K L K T A R Q Q S H L T Q E A V A D L I L V S R Q T I S N W E N E K S Y P D I V N L I K L S D L Y Q I S L D T L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q49UI9 Cluster: Putative transcriptional regulator; n=1; Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305|Rep: Putative transcriptional regulator - Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 /DSM 20229) HSP 1 e-value: 7.0E-8 bit: 60.8 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y - S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L G H Q I K Y Y R - Q R G Y L S Q E S L A E K L Y V S R Q T I S N W E N D K S Y P D I H N L L M L S S L F D V S L D D L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q5HS27 Cluster: Transcriptional regulator, Cro/CI family; n=2; Staphylococcus epidermidis|Rep: Transcriptional regulator, Cro/CI family - Staphylococcus epidermidis (strain ATCC 35984 / RP62A) HSP 1 e-value: 9.0E-8 bit: 60.5 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. V S N Q I K K F R E R D G Y S Q E F L A E K M F V S R Q T I S N W E N D K S Y P D I H N L L I M C Q L F K V S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q8VUA5 Cluster: Hypothetical membrane protein; n=1; Lactobacillus casei|Rep: Hypothetical membrane protein - Lactobacillus casei HSP 1 e-value: 9.0E-8 bit: 60.5 Len: 174 Query Start:274 Query End:447 Subject Strand: null Subject Start: 4 Subject End: 61 ................................................................................................................................................................................................................................................................................. G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................. G D R L K N A R T E L N L T Q E Q V A N D F F I T R Q T I S S W E N E K T Y P D I A N L I K L S D Y Y H I S L D I L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q48RK5 Cluster: Transcriptional regulator; n=1; Streptococcus pyogenes serotype M28|Rep: Transcriptional regulator - Streptococcus pyogenes serotype M28 HSP 1 e-value: 1.0E-7 bit: 60.1 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 6 Subject End: 64 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. I G Q Q I I R Y R K Q Q A L S Q E K L A E K V Y V S R Q S I S N W E N D K T Y P D I H S L L L L S Q I F Q V S L D Q L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q035L0 Cluster: Transcriptional regulator, xre family; n=1; Lactobacillus casei ATCC 334|Rep: Transcriptional regulator, xre family - Lactobacillus casei (strain ATCC 334) HSP 1 e-value: 2.0E-7 bit: 59.3 Len: 168 Query Start:280 Query End:447 Subject Strand: null Subject Start: 6 Subject End: 61 ....................................................................................................................................................................................................................................................................................... Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................... K L K L A R Q Q Q Q L T Q T Q I A E Q L H V S P K T I S S W E N A R S F P D I G T L V R I S D F Y D I S L D Q L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1U9W5 Cluster: Helix-turn-helix motif; n=1; Lactobacillus reuteri 100-23|Rep: Helix-turn-helix motif - Lactobacillus reuteri 100-23 HSP 1 e-value: 2.0E-7 bit: 58.9 Len: 159 Query Start:289 Query End:447 Subject Strand: null Subject Start: 6 Subject End: 61 ................................................................................................................................................................................................................................................................................................ F I R E Q R - - - G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................ Y I K K Q R N N L G F T Q A E I A E K L H V T R Q T I S N W E Q G K S Y P D L D T L V K I S D I Y K I S I D T L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q03N49 Cluster: Transcriptional regulator, xre family; n=1; Lactobacillus brevis ATCC 367|Rep: Transcriptional regulator, xre family - Lactobacillus brevis (strain ATCC 367 / JCM 1170) HSP 1 e-value: 2.0E-7 bit: 58.9 Len: 174 Query Start:274 Query End:447 Subject Strand: null Subject Start: 4 Subject End: 61 ................................................................................................................................................................................................................................................................................. G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................. G D R L K K G R T E L N L T Q E Q V A R D F F I T R Q T I S S W E N E K T Y P D I I S L I K L S D Y Y H V S L D T L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q4V1T5 Cluster: Transcriptional regulator; n=2; Bacillus cereus group|Rep: Transcriptional regulator - Bacillus cereus (strain ZK / E33L) HSP 1 e-value: 3.0E-7 bit: 58.5 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 6 Subject End: 64 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L G S Q L K R F R E S K S F S Q E D V A R K V G V T R Q A V Y K W E S N K S Y P D I D N L I L L S E L Y E V T I D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q4L300 Cluster: Similar to transcriptional regulator; n=1; Staphylococcus haemolyticus JCSC1435|Rep: Similar to transcriptional regulator - Staphylococcus haemolyticus (strain JCSC1435) HSP 1 e-value: 7.0E-7 bit: 57.4 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 61 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. I G Q Q I R K Y R E K E K Y S Q E Y L A E K L Y V S R Q T I S N W E N E R S Y P D I H N L L M M C T L F N V S L D D L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1JK73 Cluster: Transcriptional regulator; n=19; Streptococcus|Rep: Transcriptional regulator - Streptococcus pyogenes serotype M12 (strain MGAS9429) HSP 1 e-value: 7.0E-7 bit: 57.4 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 6 Subject End: 64 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. I G Q Q I I R Y R K Q Q A L S Q E K L A E K V Y V S Y Q S I S N W E N D K T Y P D I H S L L L L S Q I F Q V S L D Q L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q033Z9 Cluster: Transcriptional regulator, xre family; n=1; Lactobacillus casei ATCC 334|Rep: Transcriptional regulator, xre family - Lactobacillus casei (strain ATCC 334) HSP 1 e-value: 7.0E-7 bit: 57.4 Len: 201 Query Start:265 Query End:465 Subject Strand: null Subject Start: 4 Subject End: 70 ........................................................................................................................................................................................................................................................................ I M L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R K A L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................................................ L S L G S R L K Q L R K A R G M T Q S Q L A D D L F V S R K T V S S W E T G R N Q P D L Q T I C R L A S Y Y Q L T V D D L L H Q Q S V ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q38W05 Cluster: Putative DNA-binding protein, XRE family; n=1; Lactobacillus sakei subsp. sakei 23K|Rep: Putative DNA-binding protein, XRE family - Lactobacillus sakei subsp. sakei (strain 23K) HSP 1 e-value: 9.0E-7 bit: 57.0 Len: 183 Query Start:265 Query End:447 Subject Strand: null Subject Start: 1 Subject End: 61 ........................................................................................................................................................................................................................................................................ I M L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................ M L I G Q R L K Q F R L G A G Y S Q R T L A D K L N V S R Q V I S K W E T D K S V P D L N L L V G L A Q L Y N V S L T E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A1BYV6 Cluster: DNA-binding protein; n=2; Bacillus cereus|Rep: DNA-binding protein - Bacillus cereus HSP 1 e-value: 9.0E-7 bit: 57.0 Len: 186 Query Start:271 Query End:456 Subject Strand: null Subject Start: 4 Subject End: 65 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................................................................................................................................................................................................................. L S K R L A E L R K K R G Y T Q A D I S H R L N I A R T T Y A N W E Y G K A D P D A D S I M R I A E L H N I F I D E L F G R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q88SU1 Cluster: Transcription regulator; n=1; Lactobacillus plantarum|Rep: Transcription regulator - Lactobacillus plantarum HSP 1 e-value: 2.0E-6 bit: 56.2 Len: 171 Query Start:277 Query End:447 Subject Strand: null Subject Start: 5 Subject End: 61 .................................................................................................................................................................................................................................................................................... K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................... E K L K V C R K H A Q L T Q S Q V A E Q L H V S R K T I S G W E N D H S F P D V G S L V Q L S D I Y D V R L D D L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q5WIQ0 Cluster: Transcriptional regulator; n=1; Bacillus clausii KSM-K16|Rep: Transcriptional regulator - Bacillus clausii (strain KSM-K16) HSP 1 e-value: 2.0E-6 bit: 56.2 Len: 174 Query Start:274 Query End:447 Subject Strand: null Subject Start: 5 Subject End: 62 ................................................................................................................................................................................................................................................................................. G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................. G S K L K Q L R E E Q G F S Q E Q L A K E L N V S R Q A V W K W E T D K G L P D I Q N I V R L S E L F D V S T D Y L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q3XXB4 Cluster: Helix-turn-helix motif; n=1; Enterococcus faecium DO|Rep: Helix-turn-helix motif - Enterococcus faecium DO HSP 1 e-value: 2.0E-6 bit: 55.8 Len: 279 Query Start:271 Query End:549 Subject Strand: null Subject Start: 4 Subject End: 91 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R K A L X X X X X X X X X X M I L T N A C T L W T C F V S S L G .................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L G S K L R E L R V K K G Y T Q E Y V A R K F N V T R Q T I S K W E N N K T T P D I E T L K K I C E F Y S T N I N S I L N E D N L K N K Q N N - - - - - L L V L T A I I F N I F V T I L G .................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q9T188 Cluster: Putative repressor protein; n=4; root|Rep: Putative repressor protein - Bacteriophage A118 HSP 1 e-value: 2.0E-6 bit: 55.8 Len: 189 Query Start:271 Query End:459 Subject Strand: null Subject Start: 3 Subject End: 65 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R K .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................................................................................................................................................................................................................. I G K K I S E L R N K R G I S Q I Q L A K D L N V S T S T I G M W E T D K R A I K D E L I V Q L A D Y F N V T T D Y L L G R E .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q74HB6 Cluster: Hypothetical protein; n=1; Lactobacillus johnsonii|Rep: Hypothetical protein - Lactobacillus johnsonii HSP 1 e-value: 3.0E-6 bit: 55.5 Len: 171 Query Start:277 Query End:447 Subject Strand: null Subject Start: 5 Subject End: 61 .................................................................................................................................................................................................................................................................................... K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................... E Q I K R L R K E N N L T Q E E M A K K L N V T R Q T I S N W E N N R N L P D F E I I I L I A E T F G V S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q2RHS2 Cluster: Transcriptional regulator, XRE family; n=1; Moorella thermoacetica ATCC 39073|Rep: Transcriptional regulator, XRE family - Moorella thermoacetica (strain ATCC 39073) HSP 1 e-value: 4.0E-6 bit: 55.1 Len: 186 Query Start:271 Query End:456 Subject Strand: null Subject Start: 4 Subject End: 65 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .............................................................................................................................................................................................................................................................................. L G E R L A F L R K E R A L S Q A E M A K L L N M G Q S T I A M Y E K N K R R P D P E T L E R L A D F F D V S I D Y L L G R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q184V8 Cluster: Putative transcriptional regulator; n=2; Clostridium difficile|Rep: Putative transcriptional regulator - Clostridium difficile (strain 630) HSP 1 e-value: 4.0E-6 bit: 55.1 Len: 186 Query Start:262 Query End:447 Subject Strand: null Subject Start: 2 Subject End: 63 ..................................................................................................................................................................................................................................................................... K I M L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................... K N M I N E N L K S L R K I N Q Y T Q E E L A E K L N V S R Q S I A K W E S G E S I P D I C S C I K L A K L Y N V K L D D L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A0Q2S0 Cluster: Transcriptional regulator, putative; n=1; Clostridium novyi NT|Rep: Transcriptional regulator, putative - Clostridium novyi (strain NT) HSP 1 e-value: 5.0E-6 bit: 54.7 Len: 177 Query Start:271 Query End:447 Subject Strand: null Subject Start: 20 Subject End: 78 .............................................................................................................................................................................................................................................................................. L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................. L H T Q I K K Y R T N L N L S Q E E L A E K V Y V T R Q T I S N W E N N K S Y P D I H S L L L L S S L F N I S L D Q L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q24ZK7 Cluster: Hypothetical protein; n=1; Desulfitobacterium hafniense Y51|Rep: Hypothetical protein - Desulfitobacterium hafniense (strain Y51) HSP 1 e-value: 5.0E-6 bit: 54.7 Len: 171 Query Start:277 Query End:447 Subject Strand: null Subject Start: 8 Subject End: 64 .................................................................................................................................................................................................................................................................................... K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................... E K L R V L R K E K G L S Q E Q L A E M V N V S R Q A V S K W E S E Q A Y P E L D K L I L L S D F F N I S L D D L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q88Y45 Cluster: Transcription regulator; n=1; Lactobacillus plantarum|Rep: Transcription regulator - Lactobacillus plantarum HSP 1 e-value: 6.0E-6 bit: 54.3 Len: 192 Query Start:262 Query End:453 Subject Strand: null Subject Start: 2 Subject End: 65 ..................................................................................................................................................................................................................................................................... K I M L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................... K I V I G T K I K E Q R Q Q H E W S Q Q T V A E R L H V S R Q T I S K W E L G K S Y P D L E L L V A L S K L F S V S T D E L L G .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q8EMI8 Cluster: Hypothetical conserved protein; n=1; Oceanobacillus iheyensis|Rep: Hypothetical conserved protein - Oceanobacillus iheyensis HSP 1 e-value: 8.0E-6 bit: 53.9 Len: 252 Query Start:196 Query End:447 Subject Strand: null Subject Start: 3 Subject End: 88 ................................................................................................................................................................................................... I I T N V K E F H L A K Q L K N K Y D E E - - E K I M L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................... L V A P I T I F T I S L Q L S N N E T G K A M N N M F F G E K L K K E R E K R G W S Q D Y L A E K V Y V S R Q S V S K W E T G K N Y P S I E V I I N L S D L F D I T I D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A4IK48 Cluster: Hypothetical protein; n=1; Geobacillus thermodenitrificans NG80-2|Rep: Hypothetical protein - Geobacillus thermodenitrificans NG80-2 HSP 1 e-value: 8.0E-6 bit: 53.9 Len: 189 Query Start:274 Query End:462 Subject Strand: null Subject Start: 4 Subject End: 66 ................................................................................................................................................................................................................................................................................. G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R K A ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................. G E K L V K L R K E K G L S Q E A L A E K L N T T R Q A I S K W E N G Q G F P E T E K L L M I A N I F E V S I D Y L L K E S A ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q1FHY1 Cluster: Helix-turn-helix motif; n=1; Clostridium phytofermentans ISDg|Rep: Helix-turn-helix motif - Clostridium phytofermentans ISDg HSP 1 e-value: 8.0E-6 bit: 53.9 Len: 174 Query Start:292 Query End:465 Subject Strand: null Subject Start: 12 Subject End: 69 ................................................................................................................................................................................................................................................................................................... I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L C G R K A L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................................................................... L R K R K G V N Q Q E L A D F L G V T F Q S V S K W E T K T T L P D I T L L P L I A D Y F Q V S V D E L L G L K P I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_Q1FJJ2 Cluster: Helix-turn-helix motif; n=1; Clostridium phytofermentans ISDg|Rep: Helix-turn-helix motif - Clostridium phytofermentans ISDg HSP 1 e-value: 8.0E-6 bit: 53.9 Len: 156 Query Start:292 Query End:447 Subject Strand: null Subject Start: 10 Subject End: 61 ................................................................................................................................................................................................................................................................................................... I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N D K T I L D S A S L I R L A D F Y Q I S L D E L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................... L R R E R G L S Q E Q L A D Q L D V S R Q S V S K W E S D Q T M P E L S K L I T L S E I F E V S L D Y L .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Predict ORF larger than 30AA ================================================ Protein_Len: 60 Strand: + Start: 196 End: 549 ................................................................................................................................................................................................... M I T N V K E F H L A K Q L K N K Y D E E E K I M L G K Q L K F I R E Q R G Y S Q A Q I A E S L G T T R Q T I S N W E N .................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 44 Strand: + Start: 447 End: 578 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................. M W S K S F I Y L Q R F E H K I N D F D K C L Y T L D L L C F I S R I A L L I F L L T F ....................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 593 End: 931 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M R R K T M F Y Y F Y L S L A I L F E I A A T S L L K L S Q G F S K L F F G C L A L M F Y G L C F F F L S L S L K G I Q ...... Protein_Len: 60 Strand: + Start: 676 End: 936 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S R F F E T I F R L P C F D V L W L V L F L F I S I F K G H S V K S S L R Y L V C N R S S R D N D I I Y S A L A R K S . Protein_Len: 35 Strand: - Start: 787 End: 891 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. A I Q D A I P R T P V V I N D I R S Q C S F T V A T L R K P I L R T M .............................................. Protein_Len: 53 Strand: - Start: 597 End: 755 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S S F L T K S N K N I E R L E I Q F Q R W L D K L V I E L N K S V I K R N G Q K S T K H S T S K R K I E M ...................................................................................................................................................................................... Protein_Len: 31 Strand: - Start: 470 End: 562 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R W L N S C L I L S K S L H R Y V K S K S Q K M E R I A R N M ....................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 36 Strand: - Start: 293 End: 400 .................................................................................................................................................................................................................................................................................................... V P A F L I Y G L E S Q L I M L F S E A S W R S S P F H Y S S E L Y H M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 40 Strand: - Start: 3 End: 122 .. S L Y S R C G S S K F M I F K S Q S L K T G T K K V S S K K L L H N I S T D L M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 85 Start: 139 End: 168 ..........................................................................................................................................TTTTAAGATGAACGTAAATCATGTTATAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 100 HP_score: -9.6 Tail_Score: -5.14965 Start: 49 End: 72 Full_Region: AACATGATAAATTTA GACTGAGACA ATTT TGTCCCAGTC TTTTTTACTGAGGAT ................................................GACTGAGACAATTTTGTCCCAGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 84 HP_score: -11.8 Tail_Score: -2.73268 Start: 49 End: 72 Full_Region: atcctcagtaaaaaa gactgggaca aaat tgtctcagtc taaatttatcatgtt ................................................gactgggacaaaattgtctcagtc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 47 HP_score: -3.0 Tail_Score: -3.26998 Start: 689 End: 705 Full_Region: CTATCTCAAGGTTTT TCGAAA CTATT TTTCGG TTGCCTTGCTTTGAT ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAACTATTTTTCGG........................................................................................................................................................................................................................................ Find igs database================================================ Query_seq: SSA_0956:SSA_0957|SSA_0956:SSA_0957:surface protein D:Dehydrogenase, putative:->->:965479..966415 937 aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtaagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga Intra-Species Hit: Count: 1 Min: 1 Max: 937 Len: 937 Subject: NC_009009_SSA_0956_SSA_0957|surface protein D:Dehydrogenase, putative|POSITIVE:POSITIVE|[965479,966415]|937 HSP 1 e-value: 1.0E-106 bit: 387.0 Len: 195 Query Start:1 Query End:195 Subject Strand: POSITIVE Subject Start: 1 Subject End: 195 aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctaca...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... aaagataagtagctcctgcatccagaacttttgaacatgataaatttagactgagacaattttgtcccagtcttttttactgaggattttttgagcaaatggttgatagatgtatcaagtattttagataggcaagtattttaagatgaacgtaaatcatgttataatagccatgtcaaagaatttttacctaca...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 8.0E-34 bit: 147.0 Len: 74 Query Start:864 Query End:937 Subject Strand: POSITIVE Subject Start: 864 Subject End: 937 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................taagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................taagccttttagggataagtctagttattgtcggacttgttttattgaacttatcacaaaagactcactagaga HSP 3 e-value: 8.0E-28 bit: 127.0 Len: 64 Query Start:550 Query End:613 Subject Strand: POSITIVE Subject Start: 550 Subject End: 613 .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgttt.................................................................................................................................................................................................................................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tagctctattgattttcctgctaactttttagttatttagaatattaggaggaaaacaatgttt.................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAAGAUAAGUAGCUCCUGCAUCCAGAACUUUUGAACAUGAUAAAUUUAGACUGAGACAAUUUUGUCCCAGUCUUUUUUACUGAGGAUUUUUUGAGCAAAUGGUUGAUAGAUGUAUCAAGUAUUUUAGAUAGGCAAGUAUUUUAAGAUGAACGUAAAUCAUGUUAUAAUAGCCAUGUCAAAGAAUUUUUACCUACAAUAAUCACUAAUGUUAAAGAAUUUCAUCUAGCCAAACAACUAAAAAAUAAGUAUGAUGAGGAGGAAAAGAUAAUGUUAGGAAAACAAUUGAAGUUUAUACGGGAGCAAAGAGGAUAUAGCCAAGCUCAGAUUGCAGAAUCAUUAGGAACGACUCGGCAGACCAUCUCGAACUGGGAAAAUGAUAAGACGAUUCUAGAUAGUGCAAGUCUUAUUCGUCUAGCCGAUUUUUACCAGAUUUCAUUAGAUGAGCUAUGUGGUCGAAAAGCUUUAUCUAUCUCCAAAGAUUCGAGCAUAAAAUCAAUGAUUUUGACAAAUGCCUGUACACUUUGGACUUGCUUUGUUUCAUCUCUCGGAUAGCUCUAUUGAUUUUCCUGCUAACUUUUUAGUUAUUUAGAAUAUUAGGAGGAAAACAAUGUUUUACUAUUUUUAUUUAUCUCUCGCAAUUCUAUUUGAAAUUGCCGCCACAAGUCUUUUAAAACUAUCUCAAGGUUUUUCGAAACUAUUUUUCGGUUGCCUUGCUUUGAUGUUUUAUGGCUUGUGCUUUUUCUUUUUAUCUCUAUCUUUAAAGGGCAUUCAGUUAAAUCUAGCUUACGCUAUUUGGUCUGCAAUAGGUCUAGUAGGGACAACGAUAUUAUCUAUUCUGCUUUGGCACGAAAAAGUAACAGCUGUAAGCCUUUUAGGGAUAAGUCUAGUUAUUGUCGGACUUGUUUUAUUGAACUUAUCACAAAAGACUCACUAGAGA ...(((((((.((....)).....(((.((((.(((((..((((...((((((.((((....)))).))))))..)))).((((((((((((((..(((((.((((((....)))))).)))))......(((...((((.(((.((((.......)))).))).)))))))...))))))))))))))................)))))..)))).)))..................(((((((((..(((((((((((((((.......(((.((((((...............(((((...((((((..(((.((((...(((..((...(((((.((...((.(((((((((..((((.....))))....((((((((....((....)).....)))))))).)))).))))).))...)).(....)....)))))....))..))).................(((((((...((.((((....((((.....))))...)))).))....)))))))...)))).)))..))).))).....)))))..((.(((((((.((((..((((((....))))))..)))).))))))))).)))))).)))................(((((((.....).))))))...((((((((...((((((.(((.((((((...((((((.....))))))..))))))....))))))))).)))))))))))))))))))))))..((((((((((((((...(((((......(((....)))((((..(((((...((((..((((((.............))))))..))))..))).))..))))...)))))...)))))))))))))).................))))))))).....)))))))........(((....))). (-234.42) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UCUCUAGUGAGUCUUUUGUGAUAAGUUCAAUAAAACAAGUCCGACAAUAACUAGACUUAUCCCUAAAAGGCUUACAGCUGUUACUUUUUCGUGCCAAAGCAGAAUAGAUAAUAUCGUUGUCCCUACUAGACCUAUUGCAGACCAAAUAGCGUAAGCUAGAUUUAACUGAAUGCCCUUUAAAGAUAGAGAUAAAAAGAAAAAGCACAAGCCAUAAAACAUCAAAGCAAGGCAACCGAAAAAUAGUUUCGAAAAACCUUGAGAUAGUUUUAAAAGACUUGUGGCGGCAAUUUCAAAUAGAAUUGCGAGAGAUAAAUAAAAAUAGUAAAACAUUGUUUUCCUCCUAAUAUUCUAAAUAACUAAAAAGUUAGCAGGAAAAUCAAUAGAGCUAUCCGAGAGAUGAAACAAAGCAAGUCCAAAGUGUACAGGCAUUUGUCAAAAUCAUUGAUUUUAUGCUCGAAUCUUUGGAGAUAGAUAAAGCUUUUCGACCACAUAGCUCAUCUAAUGAAAUCUGGUAAAAAUCGGCUAGACGAAUAAGACUUGCACUAUCUAGAAUCGUCUUAUCAUUUUCCCAGUUCGAGAUGGUCUGCCGAGUCGUUCCUAAUGAUUCUGCAAUCUGAGCUUGGCUAUAUCCUCUUUGCUCCCGUAUAAACUUCAAUUGUUUUCCUAACAUUAUCUUUUCCUCCUCAUCAUACUUAUUUUUUAGUUGUUUGGCUAGAUGAAAUUCUUUAACAUUAGUGAUUAUUGUAGGUAAAAAUUCUUUGACAUGGCUAUUAUAACAUGAUUUACGUUCAUCUUAAAAUACUUGCCUAUCUAAAAUACUUGAUACAUCUAUCAACCAUUUGCUCAAAAAAUCCUCAGUAAAAAAGACUGGGACAAAAUUGUCUCAGUCUAAAUUUAUCAUGUUCAAAAGUUCUGGAUGCAGGAGCUACUUAUCUUU ......((((((((((((.((((((((..........................))))))))..)))))))))))).((.....(((((((.(((....)))..........((((.(((((......((...((((.(((......((((....)))).......)))))))..)).....))))).))))....)))))))(((((((..(((((((((....(((((....(((((.....))))).....))))).))).))))))...).)))))))).(((((((......))))))).((((((((.......(((.((((((..((((((((.(((((.((.((......)).)).))))).)))))))).....((((.....(((((...............(((((((.((.(..((((..(((((.....)))))...))))..).))))))))).((((...((((((...(((((.....(((.((....))...((((..(((((.((..((((((...(((.........)))....))))))..))))))).))))...))).))))).((.(((((((.....))))))).)).....))))))..))))...))))).))))................)))))).))).............(((((((((..((((......(((((....)))))((((((..................((((((.(((.....(((.(((((...(((((((.(((.((((.......)))).))).))))...)))......((((..((((((....))))))..))))..))))).))))))))))))...(((((((((((....)))))))))))...))))))........))))....)))).)))))....)))))))) (-208.49) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 359 338 293 196 154 NC_009009:SSA_0334|5end_Diphosphomevalonate_decarboxylase,_putative_327855..328085_POSITIVE 339 326 286 202 153 NC_009009:SSA_1811|5end_6-phosphogluconate_dehydrogenase,_putative_1796830..1797060_NEGATIVE 319 747 701 109 45 NC_009009:SSA_1374|5end_Multidrug_ABC_transporter,_ATPase_and_permease_components,_putative_1393095..1393325_NEGATIVE 318 358 313 69 29 NC_009009:SSA_0218|5end_Sugar-binding_periplasmic_protein,_putative_213863..214093_POSITIVE 317 420 375 180 138 NC_009009:SSA_1180|5end_hypothetical_protein_1208559..1208789_NEGATIVE 316 370 327 213 159 NC_009009:SSA_1694|5end_PTS_system,_lactose-specific_IIA_component,_putative_1687128..1687358_NEGATIVE 312 330 288 135 86 NC_009009:SSA_0182|5end_Endoglucanase,_putative_186299..186529_POSITIVE 311 780 734 163 115 NC_009009:SSA_1481|5end_FmtA-like_protein,_putative_1486622..1486852_NEGATIVE 309 850 803 221 160 NC_009009:SSA_0088|5end_V-type_sodium_ATPase,_subunit_C,_putative_88930..89160_POSITIVE 308 350 301 57 10 NC_009009:SSA_1103|5end_hypothetical_protein_1123833..1124063_POSITIVE 307 540 499 198 150 NC_009009:SSA_1850|5end_DNA-directed_RNA_polymerase,_subunit_K/omega,_putative_1846024..1846254_NEGATIVE 306 357 313 46 3 NC_009009:SSA_2353|5end_ABC-type_nitrate/sulfonate/bicarbonate_transport_system,_permease_component,_putative_2355302..2355532_NEGATIVE 306 370 322 62 11 NC_009009:SSA_2323|5end_Transporter,_putative_2327604..2327834_POSITIVE 306 839 792 220 180 NC_009009:SSA_2102|5end_Conserved_uncharacterized_protein_2106410..2106640_NEGATIVE 302 322 294 88 64 NC_009009:SSA_1672|5end_hypothetical_protein_1670389..1670619_NEGATIVE 301 879 836 224 185 NC_009009:SSA_0944|5end_Phosphate_import_ATP-binding_protein_pstB_2,_putative_951741..951971_POSITIVE 300 354 313 52 9 NC_009009:SSA_2207|5end_hypothetical_protein_2207221..2207451_NEGATIVE 298 355 312 41 1 NC_009009:SSA_0875|5end_Rod_shape_determining_protein_(cell-cycle_protein),_putative_868928..869158_POSITIVE 296 840 792 97 52 NC_009009:SSA_1256|5end_NAD-dependent_deacetylase,_putative_1283094..1283324_NEGATIVE 295 736 702 231 194 NC_009009:SSA_0785|5end_Proton-translocating_ATPase,_F1_sector,_delta_subunit,_putative_768044..768274_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 348 77 37 92 53 NC_009009:SSA_2301|3end_S-layer_protein/_peptidoglycan_endo-beta-N-acetylglucosaminidase,_putative_2302669..2302819_NEGATIVE 343 78 48 76 47 NC_009009:SSA_1909|3end_Transcriptional_attenuator_LytR,_putative_1900904..1901054_NEGATIVE 319 750 705 71 12 NC_009009:SSA_2230|3end_Ribonucleotide_reductase,_class_III,_anaerobic,_putative_2228963..2229113_NEGATIVE 319 747 701 119 55 NC_009009:SSA_1375|3end_Multidrug_ABC_transporter,_ATPase_and_permease_components,_putative_1393085..1393235_NEGATIVE 318 358 313 72 32 NC_009009:SSA_0217|3end_Two-component_system_transcriptional_regulator_(CheY_domain_and_HTH-like_DNA-binding_domain),_putative_213946..214096_POSITIVE 317 420 375 147 105 NC_009009:SSA_1181|3end_Hydrolase,_alpha/beta_superfamily,_putative_1208592..1208742_NEGATIVE 310 756 711 59 16 NC_009009:SSA_1711|3end_Endonuclease_III,_putative_1699007..1699157_NEGATIVE 306 839 792 130 90 NC_009009:SSA_2103|3end_hypothetical_protein_2106500..2106650_NEGATIVE 302 588 541 88 46 NC_009009:SSA_0706|3end_RNA_helicase,_putative_692909..693059_POSITIVE 301 887 858 48 12 NC_009009:SSA_2253|3end_3-Methyladenine_DNA_glycosylase_I,_constitutive,_putative_2248870..2249020_NEGATIVE 298 689 650 44 4 NC_009009:SSA_1472|3end_hypothetical_protein_1478485..1478635_NEGATIVE 296 840 792 85 40 NC_009009:SSA_1257|3end_hypothetical_protein_1283106..1283256_NEGATIVE 294 767 735 134 99 NC_009009:SSA_0270|3end_Phosphotransferase_system_(PTS)_cellobiose-specific,_IIC_component,_putative_264314..264464_POSITIVE 293 99 52 66 15 NC_009009:SSA_0182|3end_Endoglucanase,_putative_187407..187557_POSITIVE 292 389 347 49 1 NC_009009:SSA_0753|3end_Foldase_protein_prsA_precursor,_putative_736055..736205_POSITIVE 291 890 845 75 18 NC_009009:SSA_0461|3end_ABC-type_multidrug_transport_system,_ATPase_and_permease_components,_putative_464905..465055_POSITIVE 290 360 318 56 10 NC_009009:SSA_0636|3end_N-(5'-phosphoribosyl)anthranilate_isomerase,_putative_625809..625959_POSITIVE 290 79 44 85 45 NC_009009:SSA_0304|3end_Bacterial_cell_wall_degradation_(CHAP/LysM_domains),_putative_301888..302038_POSITIVE 288 574 539 83 52 NC_009009:SSA_1973|3end_Histidine_kinase,_putative_1968407..1968557_NEGATIVE 287 110 65 58 14 NC_009009:SSA_2117|3end_DNA_recombination_protein_RmuC,_putative_2118556..2118706_NEGATIVE