Origin IGS:
aatcatagcaacagatttatcagctttatcttttcctcctgaaagtggactatttcttaattcaatcaatcctttgttcgtcatttctgcttgaccttcagatttagcagcaatcctcattccataactttctttcccactaagataaatttttccagtaattgcattaataacttttgcatatgtactataccaagtataagtattttgtacatttctcggttgataaacatatattcccatagagttatttccacgaaaatcaattgttccttcattaattaattcttgatattgatgactatttggttcaacatgacctgcacttataccaccatctgaattttcctctacttgggctaatcctactttataacctacatatccatctttactttttttaatattcattttaccagatggcccattaatttctctatctgtaaattcttttatatactgatcatctttttctttaacatctgtaattgttcctgcatttgctaaaattccaccattttcctgagaaactaatgctaaagttagaattcctgctaaatttaaagttgttccagactttatttcaaatctttgccctattccaccatagttatctatttcccaaaatctagaacctcctataaagaaatattgatggtttctttctgttccctgagaatcaacaatattatctgcaaattcttttccatttccatagttataggaattaaaattatactctccagcaggaatattagcataaaatgcttgcttatacattttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacatcaggtgctactggtgaaaatgatggtatattaatattgggtgcacttggtgtatttggtactcctggtgtagcacttggtctaggttgaggaatatcaactggtggtacagataatgtaattgcacttttttgaatatttttaggtctaattcctgcacttacctctattgtcattggatcttcaggaactagtgccctatttaccaatccataattcaatccatttccatttggattaaatcctccatttgttgctattattgaagctaatgctgctttctggtcagctgttctagctgttgcagttcttccaaatacatttgtacttcttgtaaatatcccttcaaatggatatttttctgccttatctcctcttcctttatatgtaccattccatttactgtacatatagtttattccaaattgccatgacatccaaggtgattttactacttgatccccttgttccattaattgtattaattctaatcttaagcctgctaaactttttgagttttctgctcttgcttcgtctatcttagattgcaaacttcctactgagtttcttaaattttctcttgatgtcgctatttcttctcttgttggtactccatttgctactggatttacttcttcagaaaaagctcctactcccatcattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
gggaggagaaagagaagtatatgggaaataataatctatataaagtagaaaacactttacgttcaatagcaaaaagatataaaagtgtaaaatattcactaggtttagcaatattattcttaatgatgggagtaggagctttttctgaagaagtaaatccagtagcaaatggagtaccaacaagagaagaaatagcgacatcaagagaaaatttaagaaactcagtaggaagtttgcaatctaagatagacgaagcaagagcagaaaactcaaaaagtttagcaggcttaagattagaattaatacaattaatggaacaaggggatcaagtagtaaaatcaccttggatgtcatggcaatttggaataaactatatgtacagtaaatggaatggtacatataaaggaagaggagataaggcagaaaaatatccatttgaagggatatttacaagaagtacaaatgtatttggaagaactgcaacagctagaacagctgaccagaaagcagcattagcttcaataatagcaacaaatggaggatttaatccaaatggaaatggattgaattatggattggtaaatagggcactagttcctgaagatccaatgacaatagaggtaagtgcaggaattagacctaaaaatattcaaaaaagtgcaattacattatctgtaccaccagttgatattcctcaacctagaccaagtgctacaccaggagtaccaaatacaccaagtgcacccaatattaatataccatcattttcaccagtagcacctgatgtaaaagaaccacaattaccaccaccacctgtatataatttagtattaggtgcagattgtaatgaagactgtaatagttcaaattcaactccacgtcaaactacaaaagatggctggataggtagtccagaacaaaaagactcacaaaatgttaaattacttttacattatacttggccttataataaaggagcagaatcatcattggcatttaaaatgtataagcaagcattttatgctaatattcctgctggagagtataattttaattcctataactatggaaatggaaaagaatttgcagataatattgttgattctcagggaacagaaagaaaccatcaatatttctttataggaggttctagattttgggaaatagataactatggtggaatagggcaaagatttgaaataaagtctggaacaactttaaatttagcaggaattctaactttagcattagtttctcaggaaaatggtggaattttagcaaatgcaggaacaattacagatgttaaagaaaaagatgatcagtatataaaagaatttacagatagagaaattaatgggccatctggtaaaatgaatattaaaaaaagtaaagatggatatgtaggttataaagtaggattagcccaagtagaggaaaattcagatggtggtataagtgcaggtcatgttgaaccaaatagtcatcaatatcaagaattaattaatgaaggaacaattgattttcgtggaaataactctatgggaatatatgtttatcaaccgagaaatgtacaaaatacttatacttggtatagtacatatgcaaaagttattaatgcaattactggaaaaatttatcttagtgggaaagaaagttatggaatgaggattgctgctaaatctgaaggtcaagcagaaatgacgaacaaaggattgattgaattaagaaatagtccactttcaggaggaaaagataaagctgataaatctgttgctatgatt

Mask Tandem Repeat Region ================================================
aatcatagcaacagatttatcagctttatcttttcctcctgaaagtggactatttcttaattcaatcaatcctttgttcgtcatttctgcttgaccttcagatttagcagcaatcctcattccataactttctttcccactaagataaatttttccagtaattgcattaataacttttgcatatgtactataccaagtataagtattttgtacatttctcggttgataaacatatattcccatagagttatttccacgaaaatcaattgttccttcattaattaattcttgatattgatgactatttggttcaacatgacctgcacttataccaccatctgaattttcctctacttgggctaatcctactttataacctacatatccatctttactttttttaatattcattttaccagatggcccattaatttctctatctgtaaattcttttatatactgatcatctttttctttaacatctgtaattgttcctgcatttgctaaaattccaccattttcctgagaaactaatgctaaagttagaattcctgctaaatttaaagttgttccagactttatttcaaatctttgccctattccaccatagttatctatttcccaaaatctagaacctcctataaagaaatattgatggtttctttctgttccctgagaatcaacaatattatctgcaaattcttttccatttccatagttataggaattaaaattatactctccagcaggaatattagcataaaatgcttgcttatacattttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacatcaggtgctactggtgaaaatgatggtatattaatattgggtgcacttggtgtatttggtactcctggtgtagcacttggtctaggttgaggaatatcaactggtggtacagataatgtaattgcacttttttgaatatttttaggtctaattcctgcacttacctctattgtcattggatcttcaggaactagtgccctatttaccaatccataattcaatccatttccatttggattaaatcctccatttgttgctattattgaagctaatgctgctttctggtcagctgttctagctgttgcagttcttccaaatacatttgtacttcttgtaaatatcccttcaaatggatatttttctgccttatctcctcttcctttatatgtaccattccatttactgtacatatagtttattccaaattgccatgacatccaaggtgattttactacttgatccccttgttccattaattgtattaattctaatcttaagcctgctaaactttttgagttttctgctcttgcttcgtctatcttagattgcaaacttcctactgagtttcttaaattttctcttgatgtcgctatttcttctcttgttggtactccatttgctactggatttacttcttcagaaaaagctcctactcccatcattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc

Find is-nt database================================================
Query_seq: FN2058:FN2059|FN2058:FN2059:Fusobacterium outer membrane protein family:Outer membrane protein:<-<-:571186..572966 1781
aatcatagcaacagatttatcagctttatcttttcctcctgaaagtggactatttcttaattcaatcaatcctttgttcgtcatttctgcttgaccttcagatttagcagcaatcctcattccataactttctttcccactaagataaatttttccagtaattgcattaataacttttgcatatgtactataccaagtataagtattttgtacatttctcggttgataaacatatattcccatagagttatttccacgaaaatcaattgttccttcattaattaattcttgatattgatgactatttggttcaacatgacctgcacttataccaccatctgaattttcctctacttgggctaatcctactttataacctacatatccatctttactttttttaatattcattttaccagatggcccattaatttctctatctgtaaattcttttatatactgatcatctttttctttaacatctgtaattgttcctgcatttgctaaaattccaccattttcctgagaaactaatgctaaagttagaattcctgctaaatttaaagttgttccagactttatttcaaatctttgccctattccaccatagttatctatttcccaaaatctagaacctcctataaagaaatattgatggtttctttctgttccctgagaatcaacaatattatctgcaaattcttttccatttccatagttataggaattaaaattatactctccagcaggaatattagcataaaatgcttgcttatacattttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacatcaggtgctactggtgaaaatgatggtatattaatattgggtgcacttggtgtatttggtactcctggtgtagcacttggtctaggttgaggaatatcaactggtggtacagataatgtaattgcacttttttgaatatttttaggtctaattcctgcacttacctctattgtcattggatcttcaggaactagtgccctatttaccaatccataattcaatccatttccatttggattaaatcctccatttgttgctattattgaagctaatgctgctttctggtcagctgttctagctgttgcagttcttccaaatacatttgtacttcttgtaaatatcccttcaaatggatatttttctgccttatctcctcttcctttatatgtaccattccatttactgtacatatagtttattccaaattgccatgacatccaaggtgattttactacttgatccccttgttccattaattgtattaattctaatcttaagcctgctaaactttttgagttttctgctcttgcttcgtctatcttagattgcaaacttcctactgagtttcttaaattttctcttgatgtcgctatttcttctcttgttggtactccatttgctactggatttacttcttcagaaaaagctcctactcccatcattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: FN2058:FN2059|FN2058:FN2059:Fusobacterium outer membrane protein family:Outer membrane protein:<-<-:571186..572966 1781
aatcatagcaacagatttatcagctttatcttttcctcctgaaagtggactatttcttaattcaatcaatcctttgttcgtcatttctgcttgaccttcagatttagcagcaatcctcattccataactttctttcccactaagataaatttttccagtaattgcattaataacttttgcatatgtactataccaagtataagtattttgtacatttctcggttgataaacatatattcccatagagttatttccacgaaaatcaattgttccttcattaattaattcttgatattgatgactatttggttcaacatgacctgcacttataccaccatctgaattttcctctacttgggctaatcctactttataacctacatatccatctttactttttttaatattcattttaccagatggcccattaatttctctatctgtaaattcttttatatactgatcatctttttctttaacatctgtaattgttcctgcatttgctaaaattccaccattttcctgagaaactaatgctaaagttagaattcctgctaaatttaaagttgttccagactttatttcaaatctttgccctattccaccatagttatctatttcccaaaatctagaacctcctataaagaaatattgatggtttctttctgttccctgagaatcaacaatattatctgcaaattcttttccatttccatagttataggaattaaaattatactctccagcaggaatattagcataaaatgcttgcttatacattttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacatcaggtgctactggtgaaaatgatggtatattaatattgggtgcacttggtgtatttggtactcctggtgtagcacttggtctaggttgaggaatatcaactggtggtacagataatgtaattgcacttttttgaatatttttaggtctaattcctgcacttacctctattgtcattggatcttcaggaactagtgccctatttaccaatccataattcaatccatttccatttggattaaatcctccatttgttgctattattgaagctaatgctgctttctggtcagctgttctagctgttgcagttcttccaaatacatttgtacttcttgtaaatatcccttcaaatggatatttttctgccttatctcctcttcctttatatgtaccattccatttactgtacatatagtttattccaaattgccatgacatccaaggtgattttactacttgatccccttgttccattaattgtattaattctaatcttaagcctgctaaactttttgagttttctgctcttgcttcgtctatcttagattgcaaacttcctactgagtttcttaaattttctcttgatgtcgctatttcttctcttgttggtactccatttgctactggatttacttcttcagaaaaagctcctactcccatcattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: FN2058:FN2059|FN2058:FN2059:Fusobacterium outer membrane protein family:Outer membrane protein:<-<-:571186..572966 1781
aatcatagcaacagatttatcagctttatcttttcctcctgaaagtggactatttcttaattcaatcaatcctttgttcgtcatttctgcttgaccttcagatttagcagcaatcctcattccataactttctttcccactaagataaatttttccagtaattgcattaataacttttgcatatgtactataccaagtataagtattttgtacatttctcggttgataaacatatattcccatagagttatttccacgaaaatcaattgttccttcattaattaattcttgatattgatgactatttggttcaacatgacctgcacttataccaccatctgaattttcctctacttgggctaatcctactttataacctacatatccatctttactttttttaatattcattttaccagatggcccattaatttctctatctgtaaattcttttatatactgatcatctttttctttaacatctgtaattgttcctgcatttgctaaaattccaccattttcctgagaaactaatgctaaagttagaattcctgctaaatttaaagttgttccagactttatttcaaatctttgccctattccaccatagttatctatttcccaaaatctagaacctcctataaagaaatattgatggtttctttctgttccctgagaatcaacaatattatctgcaaattcttttccatttccatagttataggaattaaaattatactctccagcaggaatattagcataaaatgcttgcttatacattttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacatcaggtgctactggtgaaaatgatggtatattaatattgggtgcacttggtgtatttggtactcctggtgtagcacttggtctaggttgaggaatatcaactggtggtacagataatgtaattgcacttttttgaatatttttaggtctaattcctgcacttacctctattgtcattggatcttcaggaactagtgccctatttaccaatccataattcaatccatttccatttggattaaatcctccatttgttgctattattgaagctaatgctgctttctggtcagctgttctagctgttgcagttcttccaaatacatttgtacttcttgtaaatatcccttcaaatggatatttttctgccttatctcctcttcctttatatgtaccattccatttactgtacatatagtttattccaaattgccatgacatccaaggtgattttactacttgatccccttgttccattaattgtattaattctaatcttaagcctgctaaactttttgagttttctgctcttgcttcgtctatcttagattgcaaacttcctactgagtttcttaaattttctcttgatgtcgctatttcttctcttgttggtactccatttgctactggatttacttcttcagaaaaagctcctactcccatcattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
Intra-Species Hit: Count: 0

Inter-species Hit: Count: 5	Min: 1	Max: 1656	Len: 1656
Subject: UniRef90_Q7P365 Cluster: FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY; n=1; Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep: FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY - Fusobacterium nucleatum subsp. vincentii ATCC 49256
HSP  1	e-value: 1.0E-53	bit: 214.0	Len: 660	Query Start:997	Query End:1656	Subject Strand: null	Subject Start: 1	Subject End: 217
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  G  V  G  A  F  S  E  E  V  N  -  -  P  V  A  N  G  V  P  T  R  E  E  I  A  T  S  R  E  N  L  R  N  S  V  G  S  L  Q  S  K  I  D  E  A  R  A  E  N  S  K  S  L  A  G  L  R  L  E  L  I  Q  L  M  E  Q  G  D  Q  V  V  K  S  P  W  M  S  W  Q  F  G  I  N  Y  M  Y  S  K  W  N  G  T  Y  K  G  R  G  D  K  A  E  K  Y  P  F  E  G  I  F  T  R  S  T  N  V  F  G  R  T  A  T  A  R  T  A  D  Q  K  A  -  A  L  A  S  I  I  A  T  X  X  X  X  X  X  X  X  X  X  X  X  X  G  L  V  N  R  A  L  V  P  E  D  P  M  T  I  E  V  S  A  G  I  R  P  K  N  I  Q  K  S  A  I  T  L  S  V  P  P  V  D  I  P  Q  P  R  P  S  A  T  P  G  V  P  N  T  P  S  A  P  N  I  N  I  P  S  F  S  P  V  A  P  D .............................................................................................................................
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  G  G  S  A  F  S  E  E  I  N  N  E  S  T  Q  N  T  I  P  T  R  E  Q  I  A  S  S  K  E  N  L  K  N  S  V  G  S  L  Q  S  K  I  D  S  A  R  T  E  N  E  K  S  L  A  G  L  K  L  E  L  I  Q  L  M  E  Q  G  D  Q  V  V  K  S  P  W  M  S  W  Q  F  G  A  N  Y  M  Y  S  K  W  N  G  T  Y  K  G  K  A  D  K  A  E  K  Y  P  F  E  G  M  F  A  R  S  T  N  L  F  E  R  V  I  S  P  L  S  E  K  Y  K  G  L  A  T  S  T  N  P  H  S  A  S  S  N  A  R  N  G  L  G  S  G  Y  G  L  A  S  T  A  P  R  Q  E  P  L  V  A  I  N  I  E  A  S  I  R  P  K  D  V  T  R  S  A  V  -  -  S  A  P  T  V  G  V  G  A  P  R  L  D  T  L  -  -  -  -  N  V  P  S  S  E  P  L  S  V  T  P  P  N  P  K  A  P  E .............................................................................................................................

Subject: UniRef90_Q7P2K3 Cluster: FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY; n=1; Fusobacterium nucleatum subsp. vincentii ATCC 49256|Rep: FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY - Fusobacterium nucleatum subsp. vincentii ATCC 49256
HSP  1	e-value: 6.0E-52	bit: 208.0	Len: 777	Query Start:4	Query End:780	Subject Strand: null	Subject Start: 1	Subject End: 250
... M  Y  K  Q  A  F  Y  A  N  I  P  A  -  -  -  -  -  G  E  Y  N  F  N  S  Y  N  Y  G  N  G  K  E  F  A  D  N  I  V  D  S  Q  G  T  E  R  N  H  Q  Y  F  F  I  G  G  S  R  F  W  E  I  D  N  Y  G  G  I  G  Q  R  F  E  I  K  S  G  T  T  L  N  L  A  G  I  L  T  L  A  L  V  S  Q  E  N  G  G  I  L  A  N  A  G  T  I  T  D  V  K  E  K  D  D  Q  Y  I  K  E  F  -  -  -  -  -  -  T  D  R  E  I  N  G  P  S  G  K  M  N  I  K  K  S  K  D  G  Y  V  G  Y  K  V  G  L  A  Q  V  E  E  N  S  D  G  G  I  S  A  G  H  V  E  P  N  S  H  Q  Y  Q  E  L  I  N  E  -  -  G  T  I  D  F  R  G  N  N  S  M  G  I  Y  V  Y  Q  P  R  N  V  Q  N  T  Y  T  W  Y  S  T  Y  A  K  V  I  N  A  I  T  G  K  I  Y  L  S  G  K  E  S  Y  G  M  R  I  A  A  K  S  E  G  Q  A  E  M  -  -  T  N  K  G  L  I  E  L  R  N  S  P  L  S  G  G  K  D  K  A  D  K  S  V  A  M .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
... M  Y  K  E  G  D  T  T  V  L  P  A  P  P  G  G  G  N  T  Y  Y  F  N  S  Y  N  F  G  G  T  K  E  F  A  N  G  V  V  N  S  Q  G  I  N  K  N  N  Q  Y  F  F  I  G  G  S  R  F  W  E  I  D  N  -  -  N  S  S  G  T  Y  E  L  P  N  G  K  K  L  N  L  G  G  I  L  T  L  G  L  V  S  Q  E  N  G  T  E  L  K  N  S  G  T  I  T  D  E  E  E  K  D  E  K  W  I  K  E  M  P  Y  D  A  G  K  D  Y  L  T  I  H  G  P  T  G  D  Y  K  V  K  R  S  G  E  G  Y  V  G  Y  K  V  G  I  A  Q  V  Q  E  N  -  -  -  -  -  -  -  G  P  T  D  Y  D  G  N  K  -  Q  K  M  T  N  S  S  T  G  K  I  N  F  F  G  E  R  S  I  G  M  Y  V  Y  L  P  G  N  -  -  -  -  -  -  -  -  T  T  Y  A  I  M  R  N  -  -  E  G  E  I  N  L  R  G  S  E  S  Y  G  M  K  I  A  A  K  S  A  D  R  A  E  M  V  N  T  S  T  G  K  I  T  L  G  K  N  -  -  -  -  G  K  D  S  A  S  N  S  I  A  M .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: UniRef90_Q4U0Z0 Cluster: Apoptosis inducing membrane protein; n=2; Fusobacterium nucleatum|Rep: Apoptosis inducing membrane protein - Fusobacterium nucleatum
HSP  1	e-value: 1.0E-38	bit: 164.0	Len: 243	Query Start:1	Query End:243	Subject Strand: null	Subject Start: 1	Subject End: 81
 M  G  I  Y  V  Y  Q  P  R  N  V  Q  N  T  Y  T  W  Y  S  T  Y  A  K  V  I  N  A  I  T  G  K  I  Y  L  S  G  K  E  S  Y  G  M  R  I  A  A  K  S  E  G  Q  A  E  M  T  N  K  G  L  I  E  L  R  N  S  P  L  S  G  G  K  D  K  A  D  K  S  V  A  M  I ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
 M  G  I  Y  V  Y  Q  P  R  N  V  Q  N  T  Y  T  W  Y  S  T  Y  A  K  V  I  N  A  I  T  G  K  I  Y  L  S  G  K  E  S  Y  G  M  R  I  A  A  K  S  E  G  Q  A  E  M  T  N  K  G  L  I  E  L  R  N  S  P  L  S  G  G  K  D  K  A  D  K  S  V  A  M  I ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: UniRef90_Q8RGN7 Cluster: Fusobacterium outer membrane protein family; n=1; Fusobacterium nucleatum subsp. nucleatum|Rep: Fusobacterium outer membrane protein family - Fusobacterium nucleatum subsp. nucleatum
HSP  1	e-value: 3.0E-16	bit: 89.7	Len: 429	Query Start:4	Query End:432	Subject Strand: null	Subject Start: 12	Subject End: 136
... I  N  G  P  S  G  K  M  N  I  K  K  S  K  D  G  Y  V  G  Y  K  V  G  L  A  Q  V  E  E  N  S  D  G  G  I  S  A  G  H  V  E  P  N  S  H  Q  Y  Q  E  L  I  N  E  G  T  I  D  F  R  G  N  N  S  M  G  I  Y  V  Y  Q  P  R  N  V  Q  N  T  Y  T  W  Y  S  T  Y  A  K  V  I  N  A  I  T  G  K  I  Y  L  S  G  K  E  S  Y  G  M  R  I  A  A  K  S  E  G  Q  A  E  M  -  -  T  N  K  G  L  I  E  L  R  N  S  P  L  S  G  G  K  D  K  A  D  K  S  V  A  M .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
... I  K  G  P  T  E  D  Y  K  V  K  R  S  G  E  G  Y  V  G  Y  K  V  G  I  A  Q  V  Q  E  N  G  P  S  Q  F  D  -  -  -  -  -  -  G  N  K  Q  K  M  T  N  S  S  T  G  K  I  N  F  F  G  E  R  S  I  G  M  Y  V  Y  L  P  G  N  -  -  -  -  -  -  -  -  T  T  H  A  I  M  R  N  -  -  E  G  E  I  N  L  R  G  S  E  S  Y  G  M  K  I  A  A  K  S  A  D  R  A  E  M  V  N  T  S  T  G  K  I  T  L  G  K  N  -  -  -  -  G  K  D  S  A  S  N  S  I  A  M .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: UniRef90_Q7P2K8 Cluster: FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY; n=2; Fusobacterium nucleatum|Rep: FUSOBACTERIUM OUTER MEMBRANE PROTEIN FAMILY - Fusobacterium nucleatum subsp. vincentii ATCC 49256
HSP  1	e-value: 5.0E-11	bit: 72.4	Len: 495	Query Start:7	Query End:501	Subject Strand: null	Subject Start: 25	Subject End: 196
...... N  A  G  T  I  T  D  V  K  E  K  D  D  Q  Y  I  -  -  -  -  K  E  F  T  D  R  E  I  N  G  P  -  -  -  S  G  K  M  N  I  K  K  S  K  D  -  -  -  -  -  -  -  -  -  -  G  Y  V  G  Y  K  V  G  L  A  Q  V  E  E  N  S  D  G  G  I  S  A  G  H  V  E  P  N  -  S  H  Q  Y  Q  E  L  I  N  E  G  T  I  D  F  R  G  N  N  S  M  G  I  Y  V  Y  Q  P  R  N  V  Q  N  T  Y  T  W  Y  S  T  Y  A  K  V  I  N  A  I  -  -  -  -  T  G  K  I  Y  L  S  G  K  E  S  Y  G  M  R  I  A  A  K  S  E  G  Q  A  E  M  T  N  K  G  L  I  E  L  R  N  S  P  L  S  G  G  K  D  K  A  D  K  S  V  A ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
...... N  E  G  T  L  T  D  D  K  E  K  D  L  E  E  I  G  G  L  K  K  G  D  S  D  K  L  K  R  S  P  H  L  G  G  D  E  I  N  V  A  R  T  K  D  K  V  V  N  G  Q  V  I  K  G  G  Y  T  G  Y  K  I  G  M  I  L  T  Q  E  F  D  D  -  -  -  -  -  -  -  -  -  P  N  P  G  N  N  Y  Y  R  L  I  N  D  G  T  I  S  F  M  G  R  N  S  I  G  I  Q  V  Y  A  K  P  N  N  K  -  -  -  -  -  A  S  T  I  I  D  V  I  N  K  E  N  K  N  G  A  G  E  I  T  L  G  G  I  E  S  Y  G  L  K  L  S  S  R  I  L  R  E  A  N  -  G  R  K  S  V  F  E  N  R  G  K  I  N  I  K  G  G  D  G  S  E  N  S  L  S ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................


nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
Predict ORF larger than 30AA ================================================
Protein_Len: 30	Strand: +	Start: 2	End: 91
. M  I  A  T  D  L  S  A  L  S  F  P  P  E  S  G  L  F  L  N  S  I  N  P  L  F  V  I  S  A ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 30	Strand: +	Start: 15	End: 104
.............. M  Y  Q  L  Y  L  F  L  L  K  V  D  Y  F  L  I  Q  S  I  L  C  S  S  F  L  L  D  L  Q  I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 91	End: 282
.......................................................................................... M  T  F  R  F  S  S  N  P  H  S  I  T  F  F  P  T  K  I  N  F  S  S  N  C  I  N  N  F  C  I  C  T  I  P  S  I  S  I  L  Y  I  S  R  L  I  N  I  Y  S  H  R  V  I  S  T  K  I  N  C ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 39	Strand: +	Start: 285	End: 401
............................................................................................................................................................................................................................................................................................ M  L  D  I  D  D  Y  L  V  Q  H  D  L  H  L  Y  H  H  L  N  F  P  L  L  G  L  I  L  L  Y  N  L  H  I  H  L  Y  F  F ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 44	Strand: +	Start: 373	End: 504
.................................................................................................................................................................................................................................................................................................................................................................................... M  T  Y  I  S  I  F  T  F  F  N  I  H  F  T  R  W  P  I  N  F  S  I  C  K  F  F  Y  I  L  I  I  F  F  F  N  I  C  N  C  S  C  I  C .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 47	Strand: +	Start: 489	End: 629
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M  F  L  H  L  L  K  F  H  H  F  P  E  K  L  M  L  K  L  E  F  L  L  N  L  K  L  F  Q  T  L  F  Q  I  F  A  L  F  H  H  S  Y  L  F  P  K  I ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 592	End: 792
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  P  Y  S  T  I  V  I  Y  F  P  K  S  R  T  S  Y  K  E  I  L  M  V  S  F  C  S  L  R  I  N  N  I  I  C  K  F  F  S  I  S  I  V  I  G  I  K  I  I  L  S  S  R  N  I  S  I  K  C  L .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 42	Strand: +	Start: 903	End: 1028
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  E  L  N  L  N  Y  Y  S  L  H  Y  N  L  H  L  I  L  N  Y  I  Q  V  V  V  V  I  V  V  L  L  H  Q  V  L  L  V  K  M  M  V  Y .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 51	Strand: +	Start: 1256	End: 1408
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  I  E  A  N  A  A  F  W  S  A  V  L  A  V  A  V  L  P  N  T  F  V  L  L  V  N  I  P  S  N  G  Y  F  S  A  L  S  P  L  P  L  Y  V  P  F  H  L  L  Y  I .....................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 50	Strand: +	Start: 1279	End: 1428
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M  V  S  C  S  S  C  C  S  S  S  K  Y  I  C  T  S  C  K  Y  P  F  K  W  I  F  F  C  L  I  S  S  S  F  I  C  T  I  P  F  T  V  H  I  V  Y  S  K  L  P .................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 1335	End: 1538
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  S  L  Q  M  D  I  F  L  P  Y  L  L  F  L  Y  M  Y  H  S  I  Y  C  T  Y  S  L  F  Q  I  A  M  T  S  K  V  I  L  L  L  D  P  L  V  P  L  I  V  L  I  L  I  L  S  L  L  N  F  L  S ...................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 1469	End: 1780
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M  N  C  I  N  S  N  L  K  P  A  K  L  F  E  F  S  A  L  A  S  S  I  L  D  C  K  L  P  T  E  F  L  K  F  S  L  D  V  A  I  S  S  L  V  G  T  P  F  A  T  G  F  T  S  S  E  K  A  P .
Protein_Len: 60	Strand: +	Start: 1542	End: 1781
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  A  N  F  L  L  S  F  L  N  F  L  L  M  S  L  F  L  L  L  L  V  L  H  L  L  L  D  L  L  L  Q  K  K  L  L  L  P  S  L  R  I  I  L  L  N  L  V  N  I  L  H  F  Y  I  F  L  L  L  N 
Protein_Len: 30	Strand: -	Start: 1400	End: 1489
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q  V  Y  L  K  N  W  I  A  M  V  D  L  T  I  K  S  S  S  G  R  T  G  N  I  T  N  I  R  M ....................................................................................................................................................................................................................................................................................................
Protein_Len: 47	Strand: -	Start: 1269	End: 1409
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H  Q  K  R  T  L  Q  E  L  Q  Q  L  E  E  L  Y  M  Q  V  E  Q  L  Y  G  K  L  H  I  N  K  Q  R  I  E  E  E  K  I  H  V  M  G  N  V  T  C  M ....................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 50	Strand: -	Start: 1008	End: 1157
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q  H  F  H  H  Y  I  L  I  P  H  V  Q  H  I  Q  Y  E  Q  H  L  V  Q  D  L  N  L  F  I  L  Q  H  Y  L  Y  H  L  Q  V  K  K  F  I  K  L  D  L  E  Q  M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: -	Start: 642	End: 848
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. E  R  L  I  L  L  I  I  Q  L  N  K  E  M  E  M  T  I  P  I  L  I  I  S  E  L  L  F  I  L  M  F  H  K  S  I  C  K  L  H  W  H  H  N  Q  E  K  I  I  L  G  L  I  I  Y  F  Y  N  L  M .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 53	Strand: -	Start: 120	End: 278
....................................................................................................................... E  M  V  K  K  G  V  L  I  F  K  E  L  L  Q  M  L  L  K  Q  M  H  V  I  G  L  I  L  I  K  Y  M  E  R  N  I  F  M  Y  E  W  L  T  I  E  V  F  I  L  Q  E  K  M ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 60	Strand: -	Start: 1	End: 1761
 T  A  I  E  E  R  T  P  V  G  N  A  V  P  N  V  E  E  S  F  A  G  V  G  M  M  L  F  L  I  A  L  G  L  S  Y  K  V  S  K  Y  R  K  A  I  S  R  L  T  N  E  V  K  Y  L  N  N  N  G  M ....................

nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================
PromScan Matrix: RpoD-17	Strand: +	Score: 82	Start: 1737	End: 1766
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTATATAGATTATTATTTCCCATATACT...............
PromScan Matrix: RpoD-17	Strand: +	Score: 81	Start: 288	End: 317
...............................................................................................................................................................................................................................................................................................CTTGATATTGATGACTATTTGGTTCAACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================
PromScan Matrix: RpoN	Strand: +	Score: 84	Start: 1602	End: 1618
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTACTCCATTTGCT...................................................................................................................................................................
PromScan Matrix: RpoN	Strand: -	Score: 82	Start: 109	End: 125
............................................................................................................ATGGAATGAGGATTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
Predict TransTerm conf > 70================================================
TransTerm Strand: +	Conf: 40	HP_score: -2.3	Tail_Score: -2.78264	Start: 989	End: 1020	Full_Region: GGTGGTAATTGTGGT TCTTTTACATCAG GTGCTA CTGGTGAAAATGA TGGTATATTAATATT
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTACATCAGGTGCTACTGGTGAAAATGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: -	Conf: 46	HP_score: -2.7	Tail_Score: -3.43676	Start: 1214	End: 1239	Full_Region: gcaacaaatggagga tttaatcca aatggaaa tggattgaa ttatggattggtaaa
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttaatccaaatggaaatggattgaa..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Find igs database================================================
Query_seq: FN2058:FN2059|FN2058:FN2059:Fusobacterium outer membrane protein family:Outer membrane protein:<-<-:571186..572966 1781
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
Intra-Species Hit: Count: 3	Min: 781	Max: 1781	Len: 1001
Subject: NC_003454_FN2058_FN2059|Fusobacterium outer membrane protein family:Outer membrane protein|NEGATIVE:NEGATIVE|[571186,572966]|1781
HSP  1	e-value: 1.0E-118	bit: 428.0	Len: 216	Query Start:781	Query End:996	Subject Strand: POSITIVE	Subject Start: 781	Subject End: 996
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttac.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttaaatgccaatgatgattctgctcctttattataaggccaagtataatgtaaaagtaatttaacattttgtgagtctttttgttctggactacctatccagccatcttttgtagtttgacgtggagttgaatttgaactattacagtcttcattacaatctgcacctaatactaaattatatacaggtggtggtggtaattgtggttcttttac.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
HSP  2	e-value: 6.0E-64	bit: 248.0	Len: 125	Query Start:1657	Query End:1781	Subject Strand: POSITIVE	Subject Start: 1657	Subject End: 1781
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc

Subject: NC_003454_FN2047_FN2048|Fusobacterium outer membrane protein family:Outer membrane protein|NEGATIVE:NEGATIVE|[556474,558890]|2417
HSP  1	e-value: 6.0E-64	bit: 248.0	Len: 125	Query Start:1657	Query End:1781	Subject Strand: POSITIVE	Subject Start: 2293	Subject End: 2417
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccatatacttctctttctcctccc

Subject: NC_003454_FN0253_FN0254|Outer membrane protein:Fusobacterium outer membrane protein family|POSITIVE:POSITIVE|[875124,876416]|1293
HSP  1	e-value: 1.0E-49	bit: 200.0	Len: 105	Query Start:1657	Query End:1761	Subject Strand: NEGATIVE	Subject Start: 10	Subject End: 114
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cattaagaataatattgctaaacctagtgaatattttacacttttatatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccat....................
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cattaagaataatattgctaaacctagtgaatattttacacttttgtatctttttgctattgaacgtaaagtgttttctactttatatagattattatttcccat....................

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UUUAAAUGCCAAUGAUGAUUCUGCUCCUUUAUUAUAAGGCCAAGUAUAAUGUAAAAGUAAUUUAACAUUUUGUGAGUCUUUUUGUUCUGGACUACCUAUCCAGCCAUCUUUUGUAGUUUGACGUGGAGUUGAAUUUGAACUAUUACAGUCUUCAUUACAAUCUGCACCUAAUACUAAAUUAUAUACAGGUGGUGGUGGUAAUUGUGGUUCUUUUACAUCAGGUGCUACUGGUGAAAAUGAUGGUAUAUUAAUAUUGGGUGCACUUGGUGUAUUUGGUACUCCUGGUGUAGCACUUGGUCUAGGUUGAGGAAUAUCAACUGGUGGUACAGAUAAUGUAAUUGCACUUUUUUGAAUAUUUUUAGGUCUAAUUCCUGCACUUACCUCUAUUGUCAUUGGAUCUUCAGGAACUAGUGCCCUAUUUACCAAUCCAUAAUUCAAUCCAUUUCCAUUUGGAUUAAAUCCUCCAUUUGUUGCUAUUAUUGAAGCUAAUGCUGCUUUCUGGUCAGCUGUUCUAGCUGUUGCAGUUCUUCCAAAUACAUUUGUACUUCUUGUAAAUAUCCCUUCAAAUGGAUAUUUUUCUGCCUUAUCUCCUCUUCCUUUAUAUGUACCAUUCCAUUUACUGUACAUAUAGUUUAUUCCAAAUUGCCAUGACAUCCAAGGUGAUUUUACUACUUGAUCCCCUUGUUCCAUUAAUUGUAUUAAUUCUAAUCUUAAGCCUGCUAAACUUUUUGAGUUUUCUGCUCUUGCUUCGUCUAUCUUAGAUUGCAAACUUCCUACUGAGUUUCUUAAAUUUUCUCUUGAUGUCGCUAUUUCUUCUCUUGUUGGUACUCCAUUUGCUACUGGAUUUACUUCUUCAGAAAAAGCUCCUACUCCCAUCAUUAAGAAUAAUAUUGCUAAACCUAGUGAAUAUUUUACACUUUUAUAUCUUUUUGCUAUUGAACGUAAAGUGUUUUCUACUUUAUAUAGAUUAUUAUUUCCCAUAUACUUCUCUUUCUCCUCCC
..........(((((((....((((((((......))))...)))).(((((.(((....))).)))))....(((.(((((...((((((......((((((.........(((((..(((((.(((..((((((((...(((.((((........(((((((............(((((.((((((.((((((.(((((((.(((........((((((......))))))....(((.((.(((((.(((..(((((((...(((((((((((.(((.(..(.((((((.(((((...((((((......))))))((((((((((((...((((..((((((((((((........(((((((((..(................)..))))))))))))))))..))))).....)))).............((((((........)))))).........))))).)))))))......)))))))))))...)..).((((((...))))))....)))....))))))))))))))))))..))).))))).)).)))...(((((...........))))).........((((((((((.............))))))))))......))))))))))........(((((.((((.........)))).)))))..)))))).)))))))))))........((((..((.((((((...))))))...))....)))).........)))))))..........)))))))...))))))))...))).))))))))))............(((....))).......)))))).......)))))))))))))).......)))))))..((((((((...(((.....((((((((((((((..(((.(((.(.....).))).))).)))))))))))...))).....)))..))))))))......................... (-207.30)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
GGGAGGAGAAAGAGAAGUAUAUGGGAAAUAAUAAUCUAUAUAAAGUAGAAAACACUUUACGUUCAAUAGCAAAAAGAUAUAAAAGUGUAAAAUAUUCACUAGGUUUAGCAAUAUUAUUCUUAAUGAUGGGAGUAGGAGCUUUUUCUGAAGAAGUAAAUCCAGUAGCAAAUGGAGUACCAACAAGAGAAGAAAUAGCGACAUCAAGAGAAAAUUUAAGAAACUCAGUAGGAAGUUUGCAAUCUAAGAUAGACGAAGCAAGAGCAGAAAACUCAAAAAGUUUAGCAGGCUUAAGAUUAGAAUUAAUACAAUUAAUGGAACAAGGGGAUCAAGUAGUAAAAUCACCUUGGAUGUCAUGGCAAUUUGGAAUAAACUAUAUGUACAGUAAAUGGAAUGGUACAUAUAAAGGAAGAGGAGAUAAGGCAGAAAAAUAUCCAUUUGAAGGGAUAUUUACAAGAAGUACAAAUGUAUUUGGAAGAACUGCAACAGCUAGAACAGCUGACCAGAAAGCAGCAUUAGCUUCAAUAAUAGCAACAAAUGGAGGAUUUAAUCCAAAUGGAAAUGGAUUGAAUUAUGGAUUGGUAAAUAGGGCACUAGUUCCUGAAGAUCCAAUGACAAUAGAGGUAAGUGCAGGAAUUAGACCUAAAAAUAUUCAAAAAAGUGCAAUUACAUUAUCUGUACCACCAGUUGAUAUUCCUCAACCUAGACCAAGUGCUACACCAGGAGUACCAAAUACACCAAGUGCACCCAAUAUUAAUAUACCAUCAUUUUCACCAGUAGCACCUGAUGUAAAAGAACCACAAUUACCACCACCACCUGUAUAUAAUUUAGUAUUAGGUGCAGAUUGUAAUGAAGACUGUAAUAGUUCAAAUUCAACUCCACGUCAAACUACAAAAGAUGGCUGGAUAGGUAGUCCAGAACAAAAAGACUCACAAAAUGUUAAAUUACUUUUACAUUAUACUUGGCCUUAUAAUAAAGGAGCAGAAUCAUCAUUGGCAUUUAAA
.((((..(((...(((.(((.((((.........(((((.....)))))...(((((...((......))..............(((((...(((((.((.(((.(((((.(((((....))))).(((...((((.((((((((((..........(((((..((...(((....))).................((((((..................((.(((...((((((((.................((....))...(((((.....))))).))))))))...)))))....................(((((.(((...........))).)))))))))))...))...)))))......(((((((((.((.......)).))))))))).................((((..((((((((........)))))))).....((((((....)))))).......))))..(((((.....)))))..))))))).)))....(((........)))........(((((.((((((((........))))))))..(((.(((((((...((((...((((((((((.....((............))......)))))))))).))))...............(((((...........))))).))))))).))).)))))..))))..)))..))))).)))))))))).....))))).)))))..)))).................((((((.((((.((((((((((..(((.....(((...............)))......)))..))))))))))..))))...)))))).....))).)))...)))..))))..(((((..............((((((.....))))))........((.((....(((((.(((.....))))))))........((((......))))....)).))....)))))....... (-212.66)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
396	297	251	169	126	NC_003454:FN1426|5end_Serine_protease_2095462..2095692_NEGATIVE
380	510	461	157	99	NC_003454:FN0295|5end_Transketolase_927986..928216_POSITIVE
354	859	811	80	26	NC_003454:FN1616|5end_transcription_antitermination_protein_NusB_126437..126667_NEGATIVE
345	503	462	211	168	NC_003454:FN1598|5end_hypothetical_protein_108152..108382_NEGATIVE
335	529	490	54	5	NC_003454:FN0083|5end_Ethanolamine_utilization_protein_eutM_precursor_721180..721410_POSITIVE
324	530	482	167	118	NC_003454:FN1627|5end_SSU_ribosomal_protein_S5P_133556..133786_NEGATIVE
321	523	481	53	15	NC_003454:FN1192|5end_hypothetical_protein_1854679..1854909_POSITIVE
300	519	471	70	19	NC_003454:FN0007|5end_glucose-inhibited_division_protein_A_645938..646168_POSITIVE
298	878	836	93	39	NC_003454:FN1560|5end_hypothetical_protein_82982..83212_NEGATIVE
296	776	733	63	18	NC_003454:FN0655|5end_hypothetical_protein_1313372..1313602_POSITIVE
292	509	465	203	154	NC_003454:FN1637|5end_LSU_ribosomal_protein_L29P_137070..137300_NEGATIVE
291	424	382	204	153	NC_003454:FN0890|5end_Thiamin_pyrophosphokinase_1552087..1552317_NEGATIVE
290	529	484	193	148	NC_003454:FN1577|5end_Rod_shape-determining_protein_mreB_88405..88635_NEGATIVE
289	756	716	194	157	NC_003454:FN1506|5end_5-amino-6-(5-phosphoribosylamino)uracil_reductase_10871..11101_POSITIVE
288	498	451	163	98	NC_003454:FN0290|5end_Hemolysin_918997..919227_NEGATIVE
283	998	958	109	68	NC_003454:FN0754|5end_Glutamyl-tRNA(Gln)_amidotransferase_subunit_A_1414646..1414876_NEGATIVE
283	787	742	174	133	NC_003454:FN1867|5end_Zn-dependent_alcohol_dehydrogenase_and_related_dehydrogenase_359597..359827_NEGATIVE
282	878	831	209	142	NC_003454:FN1226|5end_uracil-DNA_glycosylase_1885503..1885733_NEGATIVE
282	510	461	144	96	NC_003454:FN0025|5end_Hypothetical_exported_24-amino_acid_repeat_protein_663746..663976_POSITIVE
279	526	494	77	45	NC_003454:FN1143|5end_glucosamine-6-phosphate_deaminase_1792461..1792691_POSITIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
747	1000	951	89	40	NC_003454:FN2048|3end_Outer_membrane_protein_558801..558951_NEGATIVE
722	980	931	80	31	NC_003454:FN0253|3end_Outer_membrane_protein_875063..875213_POSITIVE
380	510	461	132	74	NC_003454:FN0294|3end_Transketolase_subunit_A_928041..928191_POSITIVE
354	859	811	75	21	NC_003454:FN1617|3end_Prolipoprotein_diacylglyceryltransferase_126442..126592_NEGATIVE
345	503	462	86	43	NC_003454:FN1599|3end_hypothetical_protein_108277..108427_NEGATIVE
324	530	482	143	94	NC_003454:FN1628|3end_LSU_ribosomal_protein_L18P_133580..133730_NEGATIVE
283	998	958	92	51	NC_003454:FN0755|3end_Glutamyl-tRNA(Gln)_amidotransferase_subunit_C_1414663..1414813_NEGATIVE
282	510	461	135	87	NC_003454:FN0024|3end_Hypothetical_exported_24-amino_acid_repeat_protein_663817..663967_POSITIVE
279	526	494	59	27	NC_003454:FN1142|3end_Oxygen-independent_coproporphyrinogen_III_oxidase_1792523..1792673_POSITIVE
278	530	490	138	99	NC_003454:FN1280|3end_Endonuclease_1940261..1940411_POSITIVE
274	532	493	47	8	NC_003454:FN2127|3end_hypothetical_protein_638226..638376_NEGATIVE
272	839	793	71	25	NC_003454:FN0953|3end_hypothetical_protein_1609515..1609665_NEGATIVE
268	1000	953	91	34	NC_003454:FN0208|3end_(R)-2-hydroxyglutaryl-CoA_dehydratase_beta-subunit_836196..836346_POSITIVE
266	778	733	53	12	NC_003454:FN1482|3end_Guanosine-3',5'-bis(Diphosphate)_3'-pyrophosphohydrolase_2163815..2163965_NEGATIVE
265	759	715	149	105	NC_003454:FN0049|3end_hypothetical_protein_686919..687069_POSITIVE
264	846	809	97	60	NC_003454:FN0756|3end_Ribosomal_large_subunit_pseudouridine_synthase_B_1414962..1415112_NEGATIVE
264	898	856	72	15	NC_003454:FN1561|3end_Hypothetical_cytosolic_protein_83032..83182_NEGATIVE
263	526	485	61	17	NC_003454:FN1608|3end_Ribosomal_protein_L11_methyltransferase_117909..118059_NEGATIVE
260	880	836	62	18	NC_003454:FN0708|3end_Hypothetical_cytosolic_protein_1367425..1367575_POSITIVE
259	549	505	71	29	NC_003454:FN1126|3end_Acetyltransferase_1769820..1769970_NEGATIVE