Origin IGS: aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 gtatctattgttggaataatgagcaaagtttaccgataaagatatctaaatcacataaattcgaactttttaaaatagtagcattgccatctttactatttagcttatatccgaagtatttaccttttgtaaaaagcgaattaattaacataggttcaatggctgttaattcataaaaaaatataactttttcttttttatatctttttagaacaatggcattttcaaacaaattgacttgtgtccataaatcaaactcccaaggcagtatcaatttactttttgcctttgatatgaaaatatgcttaccaaggtctgttgctttcggcagttttttatcggcaaaagaaattgttttcaacttatactgaggacctgaaggcggattaaacatcttactaataaaaaaaactccgaatattacaagaatacctaagtaaataaatttatctatacccatatttaatactccccagtataataccatttttaaggtactttttctactttaaattatccggtttttattccgattggcagcttgggcgtttttctttatccaagtcttgaaaaaaagggccttttgtggtagtcttaaagcctt Mask Tandem Repeat Region ================================================ aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Find is-nt database================================================ Query_seq: TDE2786:TDE0001|TDE2786:TDE0001:DNA polymerase III subunit alpha:chromosomal replication initiator protein DnaA:<-<-:biojavax:join:[1..165,2842763..2843201] 604 aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: TDE2786:TDE0001|TDE2786:TDE0001:DNA polymerase III subunit alpha:chromosomal replication initiator protein DnaA:<-<-:biojavax:join:[1..165,2842763..2843201] 604 aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: TDE2786:TDE0001|TDE2786:TDE0001:DNA polymerase III subunit alpha:chromosomal replication initiator protein DnaA:<-<-:biojavax:join:[1..165,2842763..2843201] 604 aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Predict ORF larger than 30AA ================================================ Protein_Len: 60 Strand: + Start: 118 End: 597 ..................................................................................................................... M V L Y W G V L N M G I D K F I Y L G I L V I F G V F F I S K M F N P P S G P Q Y K L K T I S F A D K K L P K A T D L G ....... Protein_Len: 57 Strand: - Start: 432 End: 602 ............................................................................................................................................................................................................................................................................................................................................................................................................................................... S N V A M S G I N I L E S K V F P L Y K P Y L S F L L S P L A V I K F L E F K H S K S I K I P L S Q E N N W C Y M .. Protein_Len: 60 Strand: - Start: 237 End: 422 ............................................................................................................................................................................................................................................ N F V I E K A S L F S G F A V S R P L C I K M D F A F L L N I S G Q S N S K H V C T L K N S F A M T R F L Y L F S F T M ...................................................................................................................................................................................... Protein_Len: 41 Strand: - Start: 38 End: 160 ..................................... S K S L S F R G L Q W D S Y F G S L K F Y F F Y R L F P I I S P L I L Y P Y L Y M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 30 Strand: - Start: 3 End: 92 .. A K L S G C F A R K K L V Q I F F F A W A A L R F L F R I M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 83 Start: 10 End: 39 .........CTTGAAAAAAAGGGCCTTTTGTGGTAGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... PromScan Matrix: RpoD-17 Strand: - Score: 82 Start: 123 End: 152 ..........................................................................................................................ATACCCATATTTAATACTCCCCAGTATAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... PromScan Matrix: RpoD-17 Strand: + Score: 81 Start: 98 End: 127 .................................................................................................GTAGAAAAAGTACCTTAAAAATGGTATTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. PromScan Matrix: RpoD-17 Strand: + Score: 81 Start: 243 End: 272 ..................................................................................................................................................................................................................................................GTTGAAAACAATTTCTTTTGCCGATAAAAA............................................................................................................................................................................................................................................................................................................................................ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 45 HP_score: -2.3 Tail_Score: -3.45155 Start: 92 End: 116 Full_Region: cagtataataccatt tttaaggta ctttttc tactttaaa ttatccggtttttat ...........................................................................................tttaaggtactttttctactttaaa........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 71 HP_score: -3.2 Tail_Score: -5.24129 Start: 274 End: 289 Full_Region: tatgcttaccaaggt ctgttg cttt cggcag ttttttatcggcaaa .................................................................................................................................................................................................................................................................................ctgttgctttcggcag........................................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: TDE2786:TDE0001|TDE2786:TDE0001:DNA polymerase III subunit alpha:chromosomal replication initiator protein DnaA:<-<-:biojavax:join:[1..165,2842763..2843201] 604 aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttctaaaaagatataaaaaagaaaaagttatatttttttatgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Intra-Species Hit: Count: 1 Min: 1 Max: 604 Len: 604 Subject: NC_002967_TDE2786_TDE0001|DNA polymerase III subunit alpha:chromosomal replication initiator protein DnaA|NEGATIVE:NEGATIVE|2842763, 165 {([2842763,2843201]), ([1,165])} (circular)|604 HSP 1 e-value: 0.0 bit: 694.0 Len: 395 Query Start:1 Query End:395 Subject Strand: POSITIVE Subject Start: 1 Subject End: 395 aaggctttaagactaccacaaaaggcccnnnnnnncaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagnnnnnnnnattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttct................................................................................................................................................................................................................. aaggctttaagactaccacaaaaggccctttttttcaagacttggataaagaaaaacgcccaagctgccaatcggaataaaaaccggataatttaaagtagaaaaagtaccttaaaaatggtattatactggggagtattaaatatgggtatagataaatttatttacttaggtattcttgtaatattcggagttttttttattagtaagatgtttaatccgccttcaggtcctcagtataagttgaaaacaatttcttttgccgataaaaaactgccgaaagcaacagaccttggtaagcatattttcatatcaaaggcaaaaagtaaattgatactgccttgggagtttgatttatggacacaagtcaatttgtttgaaaatgccattgttct................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-93 bit: 345.0 Len: 174 Query Start:431 Query End:604 Subject Strand: POSITIVE Subject Start: 431 Subject End: 604 ..............................................................................................................................................................................................................................................................................................................................................................................................................................................atgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac ..............................................................................................................................................................................................................................................................................................................................................................................................................................................atgaattaacagccattgaacctatgttaattaattcgctttttacaaaaggtaaatacttcggatataagctaaatagtaaagatggcaatgctactattttaaaaagttcgaatttatgtgatttagatatctttatcggtaaactttgctcattattccaacaatagatac Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAGGCUUUAAGACUACCACAAAAGGCCCUUUUUUUCAAGACUUGGAUAAAGAAAAACGCCCAAGCUGCCAAUCGGAAUAAAAACCGGAUAAUUUAAAGUAGAAAAAGUACCUUAAAAAUGGUAUUAUACUGGGGAGUAUUAAAUAUGGGUAUAGAUAAAUUUAUUUACUUAGGUAUUCUUGUAAUAUUCGGAGUUUUUUUUAUUAGUAAGAUGUUUAAUCCGCCUUCAGGUCCUCAGUAUAAGUUGAAAACAAUUUCUUUUGCCGAUAAAAAACUGCCGAAAGCAACAGACCUUGGUAAGCAUAUUUUCAUAUCAAAGGCAAAAAGUAAAUUGAUACUGCCUUGGGAGUUUGAUUUAUGGACACAAGUCAAUUUGUUUGAAAAUGCCAUUGUUCUAAAAAGAUAUAAAAAAGAAAAAGUUAUAUUUUUUUAUGAAUUAACAGCCAUUGAACCUAUGUUAAUUAAUUCGCUUUUUACAAAAGGUAAAUACUUCGGAUAUAAGCUAAAUAGUAAAGAUGGCAAUGCUACUAUUUUAAAAAGUUCGAAUUUAUGUGAUUUAGAUAUCUUUAUCGGUAAACUUUGCUCAUUAUUCCAACAAUAGAUAC ..((((((.............))))))..........((.(((((..............))))))).......(((((((...((((....(((......)))..((((((........))))))...)))).(((((.....(((.((((.(((((.......(((((.((((....((((....((((((((((((..(((..((((((..........(((....))).........((((((....)))))).))))))..)))))))))).))))).))))...)))).)))))(((((..(((........((((....((((((..(.(((.(....).))))..)))))).(((....)))..............))))...(((((((((((((((((...........))))))))))))).)))).....((((((....((((.....((((((((...(((((.....))))).....))))).))).....))))....)))))).......................)))..)))))........))))).)))).))).....))))).)))))))............ (-123.46) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GUAUCUAUUGUUGGAAUAAUGAGCAAAGUUUACCGAUAAAGAUAUCUAAAUCACAUAAAUUCGAACUUUUUAAAAUAGUAGCAUUGCCAUCUUUACUAUUUAGCUUAUAUCCGAAGUAUUUACCUUUUGUAAAAAGCGAAUUAAUUAACAUAGGUUCAAUGGCUGUUAAUUCAUAAAAAAAUAUAACUUUUUCUUUUUUAUAUCUUUUUAGAACAAUGGCAUUUUCAAACAAAUUGACUUGUGUCCAUAAAUCAAACUCCCAAGGCAGUAUCAAUUUACUUUUUGCCUUUGAUAUGAAAAUAUGCUUACCAAGGUCUGUUGCUUUCGGCAGUUUUUUAUCGGCAAAAGAAAUUGUUUUCAACUUAUACUGAGGACCUGAAGGCGGAUUAAACAUCUUACUAAUAAAAAAAACUCCGAAUAUUACAAGAAUACCUAAGUAAAUAAAUUUAUCUAUACCCAUAUUUAAUACUCCCCAGUAUAAUACCAUUUUUAAGGUACUUUUUCUACUUUAAAUUAUCCGGUUUUUAUUCCGAUUGGCAGCUUGGGCGUUUUUCUUUAUCCAAGUCUUGAAAAAAAGGGCCUUUUGUGGUAGUCUUAAAGCCUU ((((((.(((((((.....(((((...))))))))))))))))))....((((((..((((((..((((((((((((((((...........))))))))).((((.......))))............))))))))))))).........((((((....((((((..(((.((((((.((((((...........)))))).))))))))).)))))).(((((((.......((((((.(...(((((..((((.((((((..((((......))))...((((.(((..((((((((.((((((......(((((....(((((.(((((((((((.((...((.....(((((((........)))))))))....)).)))..................)))))))))))))....)).))).....))))))..........................(((((....))))).........(((((((((.......))))))))).......))))))))..)))..)))).)))))).))))...)))))))))))))))))))...))))))..)))))).............. (-111.57) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 890 70 21 161 112 NC_002967:TDE2786|5end_DNA_polymerase_III_subunit_alpha_2842672..2842902_NEGATIVE 299 309 261 201 155 NC_002967:TDE2340|5end_FMN-binding_domain_protein_2377855..2378085_NEGATIVE 292 387 344 113 79 NC_002967:TDE2494|5end_hypothetical_protein_2518497..2518727_POSITIVE 292 89 41 67 17 NC_002967:TDE2492|5end_hypothetical_protein_2516414..2516644_NEGATIVE 272 230 187 213 171 NC_002967:TDE1176|5end_oxygen-independent_coproporphyrinogen_III_oxidase,_putative_1206550..1206780_NEGATIVE 272 69 25 86 32 NC_002967:TDE1132|5end_chorismate_synthase_1163415..1163645_POSITIVE 268 500 455 169 124 NC_002967:TDE1260|5end_cholinephosphate_cytidylyltransferase/choline_kinase_1294028..1294258_POSITIVE 263 67 21 163 112 NC_002967:TDE2347|5end_30S_ribosomal_protein_S2_2384378..2384608_NEGATIVE 263 279 231 142 98 NC_002967:TDE2316|5end_hypothetical_protein_2353080..2353310_POSITIVE 263 75 57 121 102 NC_002967:TDE1512|5end_hypothetical_protein_1559203..1559433_POSITIVE 261 369 339 140 116 NC_002967:TDE2338|5end_hypothetical_protein_2374719..2374949_NEGATIVE 258 319 274 78 27 NC_002967:TDE1627|5end_glycine_cleavage_system_T_protein_1676411..1676641_NEGATIVE 258 314 274 96 54 NC_002967:TDE0175|5end_pyrrolidone-carboxylate_peptidase_208782..209012_NEGATIVE 257 310 261 209 157 NC_002967:TDE2129|5end_hypothetical_protein_2161463..2161693_POSITIVE 257 88 52 59 2 NC_002967:TDE0849|5end_hypothetical_protein_871599..871829_POSITIVE 256 260 214 186 125 NC_002967:TDE1278|5end_conserved_hypothetical_protein_TIGR01440_1312788..1313018_NEGATIVE 256 250 220 61 30 NC_002967:TDE0239|5end_glycine_reductase_complex_protein_GrdD_272982..273212_NEGATIVE 254 45 1 200 150 NC_002967:TDE2118|5end_DNA_topoisomerase_IV_subunit_A_2151265..2151495_NEGATIVE 253 315 273 219 177 NC_002967:TDE2000|5end_ABC_transporter,_ATP-binding/permease_protein,_HlyB_family_2017859..2018089_POSITIVE 253 279 231 134 84 NC_002967:TDE1970|5end_sensory_box_histidine_kinase_1985744..1985974_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 295 269 221 56 2 NC_002967:TDE2763|3end_flagellar_motor_switch_protein_2817737..2817887_NEGATIVE 272 69 25 122 68 NC_002967:TDE1131|3end_hypothetical_protein_1163531..1163681_POSITIVE 269 47 1 71 15 NC_002967:TDE2436|3end_hypothetical_protein_2467446..2467596_POSITIVE 268 360 313 60 6 NC_002967:TDE0635|3end_hypothetical_protein_670578..670728_POSITIVE 263 75 57 32 13 NC_002967:TDE1511|3end_pathogen-specific_surface_antigen,_putative_1559194..1559344_POSITIVE 258 314 274 78 36 NC_002967:TDE0176|3end_hypothetical_protein_208800..208950_NEGATIVE 256 250 220 48 17 NC_002967:TDE0240|3end_glycine_reductase_complex_protein_GrdC_272995..273145_NEGATIVE 254 45 1 67 17 NC_002967:TDE2119|3end_glycine_reductase_complex_selenoprotein_GrdB2_2151398..2151548_NEGATIVE 253 315 273 76 34 NC_002967:TDE1999|3end_DNA_polymerase_III_domain_protein_2017796..2017946_POSITIVE 253 279 231 137 87 NC_002967:TDE1971|3end_DNA_polymerase_III_domain_protein_1985741..1985891_NEGATIVE 252 69 22 69 2 NC_002967:TDE0085|3end_ATP-dependent_DNA_helicase,_UvrD/Rep_family_97596..97746_NEGATIVE 250 66 23 81 36 NC_002967:TDE2785|3end_hypothetical_protein_2838601..2838751_NEGATIVE 247 275 255 28 8 NC_002967:TDE2116|3end_hypothetical_protein_2144778..2144928_NEGATIVE 246 284 242 145 93 NC_002967:TDE2517|3end_DNA_repair_protein_RadA_2542454..2542604_NEGATIVE 245 586 552 62 26 NC_002967:TDE0278|3end_hypothetical_protein_308501..308651_NEGATIVE 244 45 1 39 2 NC_002967:TDE2475|3end_MATE_efflux_family_protein_2497130..2497280_NEGATIVE 244 526 487 39 3 NC_002967:TDE0648|3end_protein-glutamate_methylesterase_683998..684148_POSITIVE 244 216 172 115 73 NC_002967:TDE0489|3end_hypothetical_protein_545156..545306_NEGATIVE 243 77 32 71 23 NC_002967:TDE1360|3end_xanthine/uracil_permease_family_protein_1400681..1400831_POSITIVE 239 301 262 115 75 NC_002967:TDE0711|3end_hypothetical_protein_745690..745840_NEGATIVE