Origin IGS:
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
ttaaaataatgaataagtatttttcgatattatgttctggtagtgttcgttggaatagtggacaacatatagataaaaaatacatgcaggggcaagcaaatatttcaaaatctttacaagtacaaatatcatggtaaaaacaaaaatggtcaatagcaagttttgttggtttattgtttaggcaacaacaagttaatccaagttggggattaacctatacaagaagtttatttgaaaaataggaactgcactatgtatataacatggtgtaaaaagcaatatcggtttttagtttgttgttgtaaaactttgcccaaattttttaaagtagcataaagtttagtttaaattttcactaccgctacagttttacacacagtacgatatggttaaaattgcaattgtctaacacccgcttcaacctgacattgcggacaagccgcaaagcaggttaagcgaatgttagatggacgccccactggggtgcatggtgaaaaaaaagaaaaatattcgtcgcaaaaaaaactaatcaaaaaaatgaattgaactttagggcaaggacgaagaagcattttacaataggtatgttta

Mask Tandem Repeat Region ================================================
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa

Find is-nt database================================================
Query_seq: TDE1772:TDE1773|TDE1772:TDE1773:hypothetical protein:hypothetical protein:<-<-:1815908..1816498 591
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: TDE1772:TDE1773|TDE1772:TDE1773:hypothetical protein:hypothetical protein:<-<-:1815908..1816498 591
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: TDE1772:TDE1773|TDE1772:TDE1773:hypothetical protein:hypothetical protein:<-<-:1815908..1816498 591
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
Predict ORF larger than 30AA ================================================
Protein_Len: 60	Strand: +	Start: 20	End: 199
................... M  L  L  R  P  C  P  K  V  Q  F  I  F  L  I  S  F  F  C  D  E  Y  F  S  F  F  S  P  C  T  P  V  G  R  P  S  N  I  R  L  T  C  F  A  A  C  P  Q  C  Q  V  E  A  G  V  R  Q  L  Q  F ........................................................................................................................................................................................................................................................................................................................................................................................................
Protein_Len: 51	Strand: +	Start: 438	End: 590
..................................................................................................................................................................................................................................................................................................................................................................................................................................................... M  D  H  F  C  F  Y  H  D  I  C  T  C  K  D  F  E  I  F  A  C  P  C  M  Y  F  L  S  I  C  C  P  L  F  Q  R  T  L  P  E  H  N  I  E  K  Y  L  F  I  I  L .
Protein_Len: 58	Strand: +	Start: 418	End: 588
................................................................................................................................................................................................................................................................................................................................................................................................................................. M  N  Q  Q  N  L  L  L  T  I  F  V  F  T  M  I  F  V  L  V  K  I  L  K  Y  L  L  A  P  A  C  I  F  Y  L  Y  V  V  H  Y  S  N  E  H  Y  Q  N  I  I  S  K  N  T  Y  S  L  F  * ...
Protein_Len: 43	Strand: -	Start: 458	End: 586
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... W  S  I  Q  V  Q  L  S  K  S  I  N  A  Q  G  Q  M  Y  K  K  D  I  H  Q  G  S  N  W  R  V  S  G  S  C  L  I  S  F  Y  K  N  M  M .....
Protein_Len: 33	Strand: -	Start: 414	End: 512
............................................................................................................................................................................................................................................................................................................................................................................................................................. V  I  F  W  C  F  K  S  N  V  M  K  T  K  V  M  I  N  T  S  T  F  I  K  F  Y  K  S  A  G  A  H  M ...............................................................................
Protein_Len: 39	Strand: -	Start: 259	End: 375
.................................................................................................................................................................................................................................................................. A  V  K  F  F  K  P  L  T  K  C  C  C  V  L  F  R  Y  Q  K  K  C  W  T  I  Y  M  T  C  N  R  N  K  L  Y  V  E  Q  M ........................................................................................................................................................................................................................
Protein_Len: 40	Strand: -	Start: 140	End: 259
........................................................................................................................................... G  A  K  R  S  T  R  L  T  L  N  F  R  T  N  S  L  Q  L  K  L  W  I  T  S  H  T  F  S  Y  R  Y  H  F  N  L  S  F  K  M ............................................................................................................................................................................................................................................................................................................................................

taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================
PromScan Matrix: RpoD-17	Strand: +	Score: 82	Start: 438	End: 467
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACCATTTTTGTTTTTACCATGATATT............................................................................................................................
PromScan Matrix: RpoD-17	Strand: +	Score: 81	Start: 432	End: 461
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCTATTGACCATTTTTGTTTTTACCAT..................................................................................................................................

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
Predict TransTerm conf > 70================================================
TransTerm Strand: -	Conf: 74	HP_score: -9.3	Tail_Score: -3.05384	Start: 130	End: 182	Full_Region: attgcaattgtctaa cacccgcttcaacctgacattgcgg acaag ccgcaaagcaggttaagcgaatg ttagatggacgcccc
.................................................................................................................................cacccgcttcaacctgacattgcggacaagccgcaaagcaggttaagcgaatg.........................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 80	HP_score: -10.5	Tail_Score: -3.04322	Start: 132	End: 180	Full_Region: GGCGTCCATCTAACA TTCGCTTAACCTGCTTTGCGG CTTGT CCGCAATGTCAGGTTGAAGCGGG TGTTAGACAATTGCA
...................................................................................................................................TTCGCTTAACCTGCTTTGCGGCTTGTCCGCAATGTCAGGTTGAAGCGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: -	Conf: 57	HP_score: -6.1	Tail_Score: -3.08679	Start: 132	End: 180	Full_Region: tgcaattgtctaaca cccgcttcaacctgacattgcgg acaag ccgcaaagcaggttaagcgaa tgttagatggacgcc
...................................................................................................................................cccgcttcaacctgacattgcggacaagccgcaaagcaggttaagcgaa...........................................................................................................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 69	HP_score: -6.4	Tail_Score: -3.97307	Start: 378	End: 400	Full_Region: AAACTTCTTGTATAG GTTAATCC CCAACTT GGATTAAC TTGTTGTTGCCTAAA
.........................................................................................................................................................................................................................................................................................................................................................................................GTTAATCCCCAACTTGGATTAAC...............................................................................................................................................................................................

Find igs database================================================
Query_seq: TDE1772:TDE1773|TDE1772:TDE1773:hypothetical protein:hypothetical protein:<-<-:1815908..1816498 591
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattcatttttttgattagttttttttgcgacgaatatttttcttttttttcaccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
Intra-Species Hit: Count: 1	Min: 1	Max: 591	Len: 591
Subject: NC_002967_TDE1772_TDE1773|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[1815908,1816498]|591
HSP  1	e-value: 0.0	bit: 977.0	Len: 493	Query Start:99	Query End:591	Subject Strand: POSITIVE	Subject Start: 99	Subject End: 591
..................................................................................................caccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
..................................................................................................caccatgcaccccagtggggcgtccatctaacattcgcttaacctgctttgcggcttgtccgcaatgtcaggttgaagcgggtgttagacaattgcaattttaaccatatcgtactgtgtgtaaaactgtagcggtagtgaaaatttaaactaaactttatgctactttaaaaaatttgggcaaagttttacaacaacaaactaaaaaccgatattgctttttacaccatgttatatacatagtgcagttcctatttttcaaataaacttcttgtataggttaatccccaacttggattaacttgttgttgcctaaacaataaaccaacaaaacttgctattgaccatttttgtttttaccatgatatttgtacttgtaaagattttgaaatatttgcttgcccctgcatgtattttttatctatatgttgtccactattccaacgaacactaccagaacataatatcgaaaaatacttattcattattttaa
HSP  2	e-value: 2.0E-21	bit: 105.0	Len: 53	Query Start:1	Query End:53	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 53
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattca..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
taaacatacctattgtaaaatgcttcttcgtccttgccctaaagttcaattca..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UAAACAUACCUAUUGUAAAAUGCUUCUUCGUCCUUGCCCUAAAGUUCAAUUCAUUUUUUUGAUUAGUUUUUUUUGCGACGAAUAUUUUUCUUUUUUUUCACCAUGCACCCCAGUGGGGCGUCCAUCUAACAUUCGCUUAACCUGCUUUGCGGCUUGUCCGCAAUGUCAGGUUGAAGCGGGUGUUAGACAAUUGCAAUUUUAACCAUAUCGUACUGUGUGUAAAACUGUAGCGGUAGUGAAAAUUUAAACUAAACUUUAUGCUACUUUAAAAAAUUUGGGCAAAGUUUUACAACAACAAACUAAAAACCGAUAUUGCUUUUUACACCAUGUUAUAUACAUAGUGCAGUUCCUAUUUUUCAAAUAAACUUCUUGUAUAGGUUAAUCCCCAACUUGGAUUAACUUGUUGUUGCCUAAACAAUAAACCAACAAAACUUGCUAUUGACCAUUUUUGUUUUUACCAUGAUAUUUGUACUUGUAAAGAUUUUGAAAUAUUUGCUUGCCCCUGCAUGUAUUUUUUAUCUAUAUGUUGUCCACUAUUCCAACGAACACUACCAGAACAUAAUAUCGAAAAAUACUUAUUCAUUAUUUUAA
..(((((......(((((((.((....(((...((((((...((((..((.(((.....((((..(((....((((((........................((((.(((....)))))))...(((((((((((((((((((((.((((((.....)))))).).))))))).)))))))))))))...))))))....)))...))))....))).))..))))((((((..(((...............)))...))))))............)))))).(((....)))..............)))....)).)))))))..)))))......((((((.(((...((((((((.............(((..(((((((((.......)))))))))(((((((.....)))))))....(((((((..((........)).)))))))..)))...(((((((((.((.(((.((((...(((((((.(((........))).)))))))..))))...(((((..........))))).....))).)).))).))))))))))))))...)))))))))..... (-130.16)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
UUAAAAUAAUGAAUAAGUAUUUUUCGAUAUUAUGUUCUGGUAGUGUUCGUUGGAAUAGUGGACAACAUAUAGAUAAAAAAUACAUGCAGGGGCAAGCAAAUAUUUCAAAAUCUUUACAAGUACAAAUAUCAUGGUAAAAACAAAAAUGGUCAAUAGCAAGUUUUGUUGGUUUAUUGUUUAGGCAACAACAAGUUAAUCCAAGUUGGGGAUUAACCUAUACAAGAAGUUUAUUUGAAAAAUAGGAACUGCACUAUGUAUAUAACAUGGUGUAAAAAGCAAUAUCGGUUUUUAGUUUGUUGUUGUAAAACUUUGCCCAAAUUUUUUAAAGUAGCAUAAAGUUUAGUUUAAAUUUUCACUACCGCUACAGUUUUACACACAGUACGAUAUGGUUAAAAUUGCAAUUGUCUAACACCCGCUUCAACCUGACAUUGCGGACAAGCCGCAAAGCAGGUUAAGCGAAUGUUAGAUGGACGCCCCACUGGGGUGCAUGGUGAAAAAAAAGAAAAAUAUUCGUCGCAAAAAAAACUAAUCAAAAAAAUGAAUUGAACUUUAGGGCAAGGACGAAGAAGCAUUUUACAAUAGGUAUGUUUA
...(((((((((((...........((((((.(((.((.((((.(....(((((((((((.....)))................(((........)))..))))))))...).)))).)).)))))))))........(((((((...((.....))...))))))).)))))))))))..((((((((((..(((.((..((((((......)))).))....(((((..((....))...)))))(((((((((.....))))))))).............))...)))..))))))))))....((((((((..((((....))))....((((((((((((((..(((((((((......((((((((.((.((........))))))))))))...(..(((((((..(((((.((((((.(.((((((.....)))))).))))))))))))..)))))))..).((((((...))))))..)))))))))....(((.....)))..........................))))))))))))))))))))))......((((((............)))))). (-148.80)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
1035	180	131	198	149	NC_002967:TDE1796|5end_hypothetical_protein_1835515..1835745_NEGATIVE
990	180	131	177	127	NC_002967:TDE1836|5end_hypothetical_protein_1869443..1869673_NEGATIVE
990	180	131	214	164	NC_002967:TDE1831|5end_hypothetical_protein_1865032..1865262_NEGATIVE
990	180	131	179	129	NC_002967:TDE1817|5end_hypothetical_protein_1852599..1852829_NEGATIVE
990	180	131	176	126	NC_002967:TDE1811|5end_hypothetical_protein_1847483..1847713_NEGATIVE
990	180	131	214	164	NC_002967:TDE1797|5end_hypothetical_protein_1836272..1836502_NEGATIVE
990	180	131	185	135	NC_002967:TDE0267|5end_HAM1_protein_299108..299338_NEGATIVE
987	180	131	195	145	NC_002967:TDE1823|5end_hypothetical_protein_1856990..1857220_NEGATIVE
960	188	141	182	134	NC_002967:TDE1839|5end_hypothetical_protein_1871221..1871451_NEGATIVE
960	188	141	207	159	NC_002967:TDE1832|5end_hypothetical_protein_1865921..1866151_NEGATIVE
946	180	131	228	178	NC_002967:TDE1790|5end_hypothetical_protein_1828007..1828237_NEGATIVE
944	180	131	181	129	NC_002967:TDE1827|5end_hydrolase,_carbon-nitrogen_family_1860830..1861060_NEGATIVE
944	180	131	167	115	NC_002967:TDE1795|5end_funZ_protein,_putative_1834673..1834903_NEGATIVE
939	140	91	231	182	NC_002967:TDE1772|5end_hypothetical_protein_1815817..1816047_NEGATIVE
938	180	131	197	147	NC_002967:TDE1820|5end_hypothetical_protein_1854692..1854922_NEGATIVE
909	180	131	228	178	NC_002967:TDE1813|5end_hypothetical_protein_1848249..1848479_NEGATIVE
909	180	131	184	134	NC_002967:TDE1791|5end_hypothetical_protein_1828775..1829005_NEGATIVE
900	189	141	183	134	NC_002967:TDE1822|5end_hypothetical_protein_1855922..1856152_NEGATIVE
838	177	131	231	184	NC_002967:TDE1799|5end_hypothetical_protein_1837264..1837494_NEGATIVE
833	180	131	176	122	NC_002967:TDE1803|5end_hypothetical_protein_1839270..1839500_NEGATIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
1035	180	131	58	9	NC_002967:TDE1831|3end_hypothetical_protein_1864415..1864565_NEGATIVE
1035	180	131	58	9	NC_002967:TDE1797|3end_hypothetical_protein_1835655..1835805_NEGATIVE
990	180	131	88	38	NC_002967:TDE1843|3end_hypothetical_protein_1872199..1872349_NEGATIVE
990	180	131	78	28	NC_002967:TDE1837|3end_hypothetical_protein_1869542..1869692_NEGATIVE
990	180	131	74	24	NC_002967:TDE1832|3end_hypothetical_protein_1865172..1865322_NEGATIVE
990	180	131	79	29	NC_002967:TDE1812|3end_hypothetical_protein_1847580..1847730_NEGATIVE
990	180	131	70	20	NC_002967:TDE1787|3end_hypothetical_protein_1826378..1826528_NEGATIVE
990	180	131	88	38	NC_002967:TDE1780|3end_hypothetical_protein_1822183..1822333_NEGATIVE
990	180	131	74	24	NC_002967:TDE0268|3end_hypothetical_protein_299219..299369_NEGATIVE
971	180	131	105	55	NC_002967:TDE1815|3end_hypothetical_protein_1849458..1849608_NEGATIVE
971	180	131	83	33	NC_002967:TDE1806|3end_hypothetical_protein_1843190..1843340_NEGATIVE
960	188	141	79	31	NC_002967:TDE1840|3end_hypothetical_protein_1871324..1871474_NEGATIVE
960	188	141	79	31	NC_002967:TDE1800|3end_hypothetical_protein_1837427..1837577_NEGATIVE
960	180	131	79	29	NC_002967:TDE1789|3end_hypothetical_protein_1827338..1827488_NEGATIVE
944	180	131	77	25	NC_002967:TDE1828|3end_hypothetical_protein_1860934..1861084_NEGATIVE
944	180	131	74	22	NC_002967:TDE1796|3end_hypothetical_protein_1834766..1834916_NEGATIVE
943	180	131	88	38	NC_002967:TDE1793|3end_hydrolase,_carbon-nitrogen_family_1829957..1830107_NEGATIVE
941	180	131	78	28	NC_002967:TDE1836|3end_hypothetical_protein_1868514..1868664_NEGATIVE
941	180	131	74	24	NC_002967:TDE1810|3end_hypothetical_protein_1845924..1846074_NEGATIVE
941	180	131	79	29	NC_002967:TDE1808|3end_hypothetical_protein_1844084..1844234_NEGATIVE