Origin IGS: aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 aaaggattcatgcaaaaagccaatcggccgtcccctatcggcatgaaaaaagaccctgcacagaagtacagggtctcgtcaatatatattcggaaatccgtttcggtcataatgtattgtagaagacggcactgtgcctcaggcctgtatgagactcttgccactgtatgatgtataggcctcgctgtaaggtagagatattgatctcggtctctcctcctttcaggttacccctcagcatctgaagaccatttgcattcagaatttggtacgtaaggcctgaatgttctttgtcaaagcgtatgtattccggattgacactgaaaggcgttgattcaccggacaaagcggtcatactatttggaatgccataggcatagcaaggacgtccgtcccagaaaggagctttgtatcggaagtcatcactgaaaaagcatcggagcaatggtttgggattgatatagtccacaataattccatatggaaggggtttttcatattgggcattgagctctaaaatgcccaaatcttcgattacttcgacaagcttaccttgctccggccacgggccttccgcaaaataataattcaggcgataaacttgtcgaaccaaatcacgcccaccgacgttgattgtggatttttcaatgaccgttgtcgtcccatgagaaaagccctcgacggctgtaccttggttgacgggaaggggtataacgtcgccaacctctgctgtgagatcatagagcagtcgcaagccgtcagactctacaacataggccttacctccttttctatataggtaaaaaggctccatcggggtctcaagacctgtccaatctttatgaaccacttgtatctcttgagcttggtattcgcctatttggatattcttctcgacacgatggcggatatacccgaaatacgaaggcgagtccatactcgttttttcacttgtgtggtaataccatgtagtcccaagaggataaagcaagatcggatcatcctgcttatcactgtttttctgtccaaaaaggacacatgcgccgaggaaaaaaacgctcattgccaataagcttcttctgtaaaaattgtttttcatactgcaatcatttattttcacaaattcggattcattaatatcaaccacggctaagatacaaatttatcggggtgcatattcccctcgcacaaatgcaataggagggagatgcaaaggcaagacgcgagaagctcgacacatgaaaaagcggctctgcttgggacggacatatctctcatacgtgccgcttcctcttacagagccgcttggttcaatttggaatcaaagccataagtggctctgattatt Mask Tandem Repeat Region ================================================ aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Find is-nt database================================================ Query_seq: PG2112:PG2114|PG2112:PG2114:hypothetical protein:hypothetical protein:-><-:2222724..2224071 1348 aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG2112:PG2114|PG2112:PG2114:hypothetical protein:hypothetical protein:-><-:2222724..2224071 1348 aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG2112:PG2114|PG2112:PG2114:hypothetical protein:hypothetical protein:-><-:2222724..2224071 1348 aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Predict ORF larger than 30AA ================================================ Protein_Len: 50 Strand: + Start: 34 End: 183 ................................. M E P S G S V R G S G T Y E R Y V R P K Q S R F F M C R A S R V L P L H L P P I A F V R G E Y A P R ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 42 Strand: + Start: 71 End: 196 ...................................................................... M R D M S V P S R A A F S C V E L L A S C L C I S L L L H L C E G N M H P D K F V S ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 43 Strand: + Start: 78 End: 206 ............................................................................. M C P S Q A E P L F H V S S F S R L A F A S P S Y C I C A R G I C T P I N L Y L S R G ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 243 End: 335 .................................................................................................................................................................................................................................................. M Q Y E K Q F L Q K K L I G N E R F F P R R M C P F W T E K Q ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 53 Strand: + Start: 311 End: 469 ...................................................................................................................................................................................................................................................................................................................... M S F L D R K T V I S R M I R S C F I L L G L H G I T T Q V K K R V W T R L R I S G I S A I V S R R I S K ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: + Start: 587 End: 757 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T A C D C S M I S Q Q R L A T L Y P F P S T K V Q P S R A F L M G R Q R S L K N P Q S T S V G V I W F D K F I A ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 51 Strand: + Start: 842 End: 994 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M P N M K N P F H M E L L W T I S I P N H C S D A F S V M T S D T K L L S G T D V L A M P M A F Q I V .................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 187 End: 1239 .......................................................................................................................................................................................... M C I L A V V D I N E S E F V K I N D C S M K N N F Y R R S L L A M S V F F L G A C V L F G Q K N S D K Q D D P I L L Y ............................................................................................................. Protein_Len: 58 Strand: + Start: 1173 End: 1346 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M H H T V A R V S Y R P E A Q C R L L Q Y I M T E T D F R I Y I D E T L Y F C A G S F F M P I G D G R L A F C M N P .. Protein_Len: 38 Strand: - Start: 1230 End: 1343 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. L V N H G F R I E S Y I N V L G Q V E T C P R K E H R Y P V A S Q S K A H M ..... Protein_Len: 53 Strand: - Start: 1181 End: 1339 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ V T A L T E Y L G S A C H R R R C Y M I V S V S K R I Y I S S V R Y K Q A P D K K M G I P S P R N A K Q M ......... Protein_Len: 36 Strand: - Start: 978 End: 1085 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. P M G F L I V A K D P S D V G K L T L G S Y M R K S L S C E P R V Y W M ....................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: - Start: 923 End: 1018 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H H S G I C L E K R P R V D K S H R H C E L Y Y S R K T R H I M .......................................................................................................................................................................................................................................................................................................................................... Protein_Len: 52 Strand: - Start: 835 End: 990 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. L E I G L I F F G K W I S N N H V I D I G F W Q E S A K E T I V E S V F S R E P V S T R A I G I A N W M ...................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 37 Strand: - Start: 768 End: 878 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K A S P G H G S C P L S T S T I S S K P M K S S L A W Y S F G R G Y P I M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 553 End: 822 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ K G D V L T C G D L A K R M P R C R D N F F G C D V D T P T I Q N S L N I A Q I I I K R F A R P R L L T L K D F Y D F M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 58 Strand: - Start: 380 End: 553 ........................................................................................................................................................................................................................................................................................................................................................................................... M T N G C L H F F S Y P S A K T N R T Y G G D H R S S Y G F L R I G L E L S V L P E Y L N S L D Q S G S P A K K G M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 280 End: 513 ....................................................................................................................................................................................................................................................................................... T I L L I I R D Q K I R K P S C P I V V C T F F R T H V R R R I E P I D A M T D L L I D L Y A F V L S L L Y L H N M F M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 30 Strand: - Start: 267 End: 356 .......................................................................................................................................................................................................................................................................... L L L K N A I L T K K R P A H T R K P C F F L S L C S S G M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 32 Strand: - Start: 215 End: 310 ...................................................................................................................................................................................................................... H I R I Q S F L H N C Y S F C N K C F F S I P L S R K K G R R M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 52 Strand: - Start: 19 End: 174 .................. P K S E L N F W A A R Y S S A A R I L S I D T G L L A A K E H T S S R A D Q R Q M E R R N C K H S P F M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 9 End: 260 ........ T R G L C L R K K M H R A E R T K G K C R G G I A N T R P S Y A G R Y I Q I K A T T S I L S D S N T F I F S Q L I F F M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 84 Start: 829 End: 858 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCATATTGGGCATTGAGCTCTAAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 79 HP_score: -2.4 Tail_Score: -5.52384 Start: 274 End: 292 Full_Region: AATTTTTACAGAAGA AGCTTATT GGC AATGAGCG TTTTTTTCCTCGGCG .................................................................................................................................................................................................................................................................................AGCTTATTGGCAATGAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 47 HP_score: -2.1 Tail_Score: -3.48994 Start: 342 End: 361 Full_Region: tcccaagaggataaa gcaagat cggatc atcctgc ttatcactgtttttc .....................................................................................................................................................................................................................................................................................................................................................gcaagatcggatcatcctgc........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 61 HP_score: -4.3 Tail_Score: -4.06384 Start: 342 End: 361 Full_Region: GAAAAACAGTGATAA GCAGGAT GATCCG ATCTTGC TTTATCCTCTTGGGA .....................................................................................................................................................................................................................................................................................................................................................GCAGGATGATCCGATCTTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 85 HP_score: -6.7 Tail_Score: -5.20154 Start: 407 End: 420 Full_Region: cccgaaatacgaagg cgagt ccat actcg ttttttcacttgtgt ......................................................................................................................................................................................................................................................................................................................................................................................................................cgagtccatactcg................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 45 HP_score: -3.2 Tail_Score: -3.18134 Start: 822 End: 850 Full_Region: gaaggggtttttcat attgggcatt gagctctaa aatgcccaaa tcttcgattacttcg .....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................attgggcattgagctctaaaatgcccaaa.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 100 HP_score: -13.2 Tail_Score: -5.14965 Start: 1274 End: 1297 Full_Region: AATATATATTGACGA GACCCTGTAC TTCT GTGCAGGGTC TTTTTTCATGCCGAT .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCTGTACTTCTGTGCAGGGTC................................................... TransTerm Strand: + Conf: 69 HP_score: -4.5 Tail_Score: -4.67353 Start: 1307 End: 1330 Full_Region: AGGGTCTTTTTTCAT GCCGATAGG GGACGG CCGATTGGC TTTTTGCATGAATCC ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATAGGGGACGGCCGATTGGC.................. Find igs database================================================ Query_seq: PG2112:PG2114|PG2112:PG2114:hypothetical protein:hypothetical protein:-><-:2222724..2224071 1348 aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Intra-Species Hit: Count: 1 Min: 1 Max: 1348 Len: 1348 Subject: NC_002950_PG2112_PG2114|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[2222724,2224071]|1348 HSP 1 e-value: 0.0 bit: 2631.0 Len: 1348 Query Start:1 Query End:1348 Subject Strand: POSITIVE Subject Start: 1 Subject End: 1348 aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgnnnnnnncctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt aataatcagagccacttatggctttgattccaaattgaaccaagcggctctgtaagaggaagcggcacgtatgagagatatgtccgtcccaagcagagccgctttttcatgtgtcgagcttctcgcgtcttgcctttgcatctccctcctattgcatttgtgcgaggggaatatgcaccccgataaatttgtatcttagccgtggttgatattaatgaatccgaatttgtgaaaataaatgattgcagtatgaaaaacaatttttacagaagaagcttattggcaatgagcgtttttttcctcggcgcatgtgtcctttttggacagaaaaacagtgataagcaggatgatccgatcttgctttatcctcttgggactacatggtattaccacacaagtgaaaaaacgagtatggactcgccttcgtatttcgggtatatccgccatcgtgtcgagaagaatatccaaataggcgaataccaagctcaagagatacaagtggttcataaagattggacaggtcttgagaccccgatggagcctttttacctatatagaaaaggaggtaaggcctatgttgtagagtctgacggcttgcgactgctctatgatctcacagcagaggttggcgacgttataccccttcccgtcaaccaaggtacagccgtcgagggcttttctcatgggacgacaacggtcattgaaaaatccacaatcaacgtcggtgggcgtgatttggttcgacaagtttatcgcctgaattattattttgcggaaggcccgtggccggagcaaggtaagcttgtcgaagtaatcgaagatttgggcattttagagctcaatgcccaatatgaaaaaccccttccatatggaattattgtggactatatcaatcccaaaccattgctccgatgctttttcagtgatgacttccgatacaaagctcctttctgggacggacgtccttgctatgcctatggcattccaaatagtatgaccgctttgtccggtgaatcaacgcctttcagtgtcaatccggaatacatacgctttgacaaagaacattcaggccttacgtaccaaattctgaatgcaaatggtcttcagatgctgaggggtaacctgaaaggaggagagaccgagatcaatatctctaccttacagcgaggcctatacatcatacagtggcaagagtctcatacaggcctgaggcacagtgccgtcttctacaatacattatgaccgaaacggatttccgaatatatattgacgagaccctgtacttctgtgcagggtcttttttcatgccgataggggacggccgattggctttttgcatgaatccttt Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAUAAUCAGAGCCACUUAUGGCUUUGAUUCCAAAUUGAACCAAGCGGCUCUGUAAGAGGAAGCGGCACGUAUGAGAGAUAUGUCCGUCCCAAGCAGAGCCGCUUUUUCAUGUGUCGAGCUUCUCGCGUCUUGCCUUUGCAUCUCCCUCCUAUUGCAUUUGUGCGAGGGGAAUAUGCACCCCGAUAAAUUUGUAUCUUAGCCGUGGUUGAUAUUAAUGAAUCCGAAUUUGUGAAAAUAAAUGAUUGCAGUAUGAAAAACAAUUUUUACAGAAGAAGCUUAUUGGCAAUGAGCGUUUUUUUCCUCGGCGCAUGUGUCCUUUUUGGACAGAAAAACAGUGAUAAGCAGGAUGAUCCGAUCUUGCUUUAUCCUCUUGGGACUACAUGGUAUUACCACACAAGUGAAAAAACGAGUAUGGACUCGCCUUCGUAUUUCGGGUAUAUCCGCCAUCGUGUCGAGAAGAAUAUCCAAAUAGGCGAAUACCAAGCUCAAGAGAUACAAGUGGUUCAUAAAGAUUGGACAGGUCUUGAGACCCCGAUGGAGCCUUUUUACCUAUAUAGAAAAGGAGGUAAGGCCUAUGUUGUAGAGUCUGACGGCUUGCGACUGCUCUAUGAUCUCACAGCAGAGGUUGGCGACGUUAUACCCCUUCCCGUCAACCAAGGUACAGCCGUCGAGGGCUUUUCUCAUGGGACGACAACGGUCAUUGAAAAAUCCACAAUCAACGUCGGUGGGCGUGAUUUGGUUCGACAAGUUUAUCGCCUGAAUUAUUAUUUUGCGGAAGGCCCGUGGCCGGAGCAAGGUAAGCUUGUCGAAGUAAUCGAAGAUUUGGGCAUUUUAGAGCUCAAUGCCCAAUAUGAAAAACCCCUUCCAUAUGGAAUUAUUGUGGACUAUAUCAAUCCCAAACCAUUGCUCCGAUGCUUUUUCAGUGAUGACUUCCGAUACAAAGCUCCUUUCUGGGACGGACGUCCUUGCUAUGCCUAUGGCAUUCCAAAUAGUAUGACCGCUUUGUCCGGUGAAUCAACGCCUUUCAGUGUCAAUCCGGAAUACAUACGCUUUGACAAAGAACAUUCAGGCCUUACGUACCAAAUUCUGAAUGCAAAUGGUCUUCAGAUGCUGAGGGGUAACCUGAAAGGAGGAGAGACCGAGAUCAAUAUCUCUACCUUACAGCGAGGCCUAUACAUCAUACAGUGGCAAGAGUCUCAUACAGGCCUGAGGCACAGUGCCGUCUUCUACAAUACAUUAUGACCGAAACGGAUUUCCGAAUAUAUAUUGACGAGACCCUGUACUUCUGUGCAGGGUCUUUUUUCAUGCCGAUAGGGGACGGCCGAUUGGCUUUUUGCAUGAAUCCUUU ...(((((((((((....)))))))))))............((((((((((((..(.((..((((.((((((.....)))))))))))))..)))))))))))).((((((((..(((((..(((..(((((((..(((((.(((((....(((((....))))))))))..)))))....(((..(((((((((((....(((((.((((.........((((.(((((((((((.......................)))))))))))....((((((.....))))))..........))))..((((((((((....(((...............(((((((((......)))))))))..)))....))))).))))).)))))))))..............((((.(((..((((((....((((.((((((.((((.(.....).)).))...))))))))))))))))...))).))))..))))))))))).(((((.......))))).(((((((..(((((..(((..(((((((.........)))))))..(((((((((..((((.(((((((((((((((((..(((((...((....)).))))).((((((((................))))))))...))).)))))))..)))))))..((((.((((((...(((((((((((((.((((((((.....(((.(((((..((((.(.(((((((((((((((....((((....))))(((....((((...))))...))).))))))))))))))).)))))......((((((........)))))).)))))...)))........((((....))))..)))))))).....................((......)).)))))).....(((.((((.........((((....)))))))).))).(((..(((((...)))))..))).....)))))))..)))))).))))..))))....(((..((((((..((.........))..))))))..))).....)))))))))...)))...((((((.((.....)).))))))......)))))...(((.((((.(((((....(....)....))))).)))).)))))))))).....))).......)))))))((((((........)))))).....((((((((((((..................(((....))).........(((.((((((((((((....))))))))))))...)))....).))))))))))))))..)))))..))))))))...... (-447.32) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAAGGAUUCAUGCAAAAAGCCAAUCGGCCGUCCCCUAUCGGCAUGAAAAAAGACCCUGCACAGAAGUACAGGGUCUCGUCAAUAUAUAUUCGGAAAUCCGUUUCGGUCAUAAUGUAUUGUAGAAGACGGCACUGUGCCUCAGGCCUGUAUGAGACUCUUGCCACUGUAUGAUGUAUAGGCCUCGCUGUAAGGUAGAGAUAUUGAUCUCGGUCUCUCCUCCUUUCAGGUUACCCCUCAGCAUCUGAAGACCAUUUGCAUUCAGAAUUUGGUACGUAAGGCCUGAAUGUUCUUUGUCAAAGCGUAUGUAUUCCGGAUUGACACUGAAAGGCGUUGAUUCACCGGACAAAGCGGUCAUACUAUUUGGAAUGCCAUAGGCAUAGCAAGGACGUCCGUCCCAGAAAGGAGCUUUGUAUCGGAAGUCAUCACUGAAAAAGCAUCGGAGCAAUGGUUUGGGAUUGAUAUAGUCCACAAUAAUUCCAUAUGGAAGGGGUUUUUCAUAUUGGGCAUUGAGCUCUAAAAUGCCCAAAUCUUCGAUUACUUCGACAAGCUUACCUUGCUCCGGCCACGGGCCUUCCGCAAAAUAAUAAUUCAGGCGAUAAACUUGUCGAACCAAAUCACGCCCACCGACGUUGAUUGUGGAUUUUUCAAUGACCGUUGUCGUCCCAUGAGAAAAGCCCUCGACGGCUGUACCUUGGUUGACGGGAAGGGGUAUAACGUCGCCAACCUCUGCUGUGAGAUCAUAGAGCAGUCGCAAGCCGUCAGACUCUACAACAUAGGCCUUACCUCCUUUUCUAUAUAGGUAAAAAGGCUCCAUCGGGGUCUCAAGACCUGUCCAAUCUUUAUGAACCACUUGUAUCUCUUGAGCUUGGUAUUCGCCUAUUUGGAUAUUCUUCUCGACACGAUGGCGGAUAUACCCGAAAUACGAAGGCGAGUCCAUACUCGUUUUUUCACUUGUGUGGUAAUACCAUGUAGUCCCAAGAGGAUAAAGCAAGAUCGGAUCAUCCUGCUUAUCACUGUUUUUCUGUCCAAAAAGGACACAUGCGCCGAGGAAAAAAACGCUCAUUGCCAAUAAGCUUCUUCUGUAAAAAUUGUUUUUCAUACUGCAAUCAUUUAUUUUCACAAAUUCGGAUUCAUUAAUAUCAACCACGGCUAAGAUACAAAUUUAUCGGGGUGCAUAUUCCCCUCGCACAAAUGCAAUAGGAGGGAGAUGCAAAGGCAAGACGCGAGAAGCUCGACACAUGAAAAAGCGGCUCUGCUUGGGACGGACAUAUCUCUCAUACGUGCCGCUUCCUCUUACAGAGCCGCUUGGUUCAAUUUGGAAUCAAAGCCAUAAGUGGCUCUGAUUAUU ......(((((((.....(((....))).(........).)))))))...((((((((.((....)).)))))))).(((..........(((....)))((((((((....(((.(((((((.((((((..((((((((.((((((((((....((.(((....))).))))))))))))...(((.((((..((((.((((....)))).))))..)))).)))....(((.(((((.......(((.....((((((((..((((.....))))..)))))))).....)))...((.((((((((((((((..((.((....)).))..))))....(((......))).........)))))).)))).))....((((((((.(((((......(((.(((((...((((.........)))).....(((.((((((((((((....(((((...((((((((((..((((....)))).((((........(((((((((.........)))))))))......((((..(((((((((.(((....((.(((....)))))....(((..(((....)))...))).))).)))))))))...))))..))))..........))))))))))..))))))))))))))..))).)))...)))))))).))))).))).)))))))))).)))..)))))))).....((......((((((((....)))..)))))..))..))))))....))))))).))).(((((..((((........((((((....(((((((...)))))))....))))))..................((((((((....(((((((((((((((...(((((......)).)))......)))))))....(((((....((((((((((....))))))))))....(((((.(((((.....((((((...((.(((((((.(((.(((......))).)))))))).)).))....(((((.....))))).....((.((((((......((.....))........)))))).))................)))))).....)))))..))))).)))))..............)))).)))).)))))))).......)))).((((.(((((((.(((....)))...))).)))).)))).)))))..))).))))).....)))...((((.(((((((((((...(((((((.(((...........)))))).)))).....)))))))))))..))))......(((((.(((((....))))).)))))... (-417.64) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 467 1338 1291 95 32 NC_002950:PG0242|5end_conserved_hypothetical_protein_TIGR00096_278960..279190_NEGATIVE 436 1329 1282 219 173 NC_002950:PG1634|5end_hypothetical_protein_1715148..1715378_NEGATIVE 430 817 772 56 10 NC_002950:PG2171|5end_D-isomer_specific_2-hydroxyacid_dehydrogenase_family_protein_2278972..2279202_NEGATIVE 429 125 82 158 113 NC_002950:PG1221|5end_oxidoreductase,_short_chain_dehydrogenase/reductase_family_1298129..1298359_POSITIVE 424 670 624 158 114 NC_002950:PG2121|5end_L-asparaginase_2229624..2229854_NEGATIVE 418 680 640 215 160 NC_002950:PG1587|5end_PAP2_superfamily_protein_1664983..1665213_POSITIVE 417 1326 1284 74 27 NC_002950:PG1475|5end_conjugative_transposon_protein_TraN_1551835..1552065_NEGATIVE 412 1009 961 196 140 NC_002950:PG0158|5end_competence_protein_F-related_protein_180175..180405_POSITIVE 405 450 407 214 163 NC_002950:PG1184|5end_alginate_O-acetyltransferase,_putative_1266870..1267100_NEGATIVE 398 818 772 216 169 NC_002950:PG0305|5end_electron_transport_complex,_RnfABCDGE_type,_D_subunit_340906..341136_POSITIVE 397 620 571 79 23 NC_002950:PG0223|5end_exonuclease_257610..257840_NEGATIVE 396 450 407 178 116 NC_002950:PG0166|5end_peptidyl-tRNA_hydrolase_188370..188600_NEGATIVE 393 139 93 130 73 NC_002950:PG2098|5end_hypothetical_protein_2206635..2206865_NEGATIVE 393 676 631 204 145 NC_002950:PG0312|5end_hypothetical_protein_347048..347278_NEGATIVE 392 820 774 69 26 NC_002950:PG1798|5end_immunoreactive_46_kDa_antigen_PG99_1894245..1894475_NEGATIVE 392 108 61 231 182 NC_002950:PG1352|5end_hypothetical_protein_1433150..1433380_NEGATIVE 390 1327 1288 59 12 NC_002950:PG1572|5end_hypothetical_protein_1651252..1651482_NEGATIVE 390 475 431 197 144 NC_002950:PG1110|5end_hypothetical_protein_1182741..1182971_POSITIVE 388 140 97 163 120 NC_002950:PG0719|5end_sensor_histidine_kinase_772979..773209_NEGATIVE 386 1330 1284 166 117 NC_002950:PG2076|5end_hypothetical_protein_2176445..2176675_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 482 674 631 103 63 NC_002950:PG0143|3end_hydrolase,_carbon-nitrogen_family_165747..165897_NEGATIVE 467 1338 1291 79 16 NC_002950:PG0243|3end_hypothetical_protein_278976..279126_NEGATIVE 437 626 584 84 31 NC_002950:PG1133|3end_hypothetical_protein_1214103..1214253_POSITIVE 429 125 82 148 103 NC_002950:PG1220|3end_erythronate-4-phosphate_dehydrogenase_1298199..1298349_POSITIVE 426 1324 1282 151 107 NC_002950:PG1635|3end_hypothetical_protein_1715214..1715364_NEGATIVE 417 1326 1284 51 4 NC_002950:PG1476|3end_conjugative_transposon_protein_TraM_1551858..1552008_NEGATIVE 400 109 67 93 34 NC_002950:PG2126|3end_conserved_hypothetical_protein_TIGR00044_2232438..2232588_NEGATIVE 400 138 92 136 88 NC_002950:PG0443|3end_hemagglutinin-related_protein_483147..483297_POSITIVE 397 620 571 75 19 NC_002950:PG0224|3end_hypothetical_protein_257614..257764_NEGATIVE 396 808 772 144 94 NC_002950:PG1040|3end_transcriptional_regulator,_putative_1107485..1107635_NEGATIVE 395 818 771 90 39 NC_002950:PG0021|3end_TIM-barrel_protein,_putative,_NifR3_family_24122..24272_NEGATIVE 393 139 93 116 59 NC_002950:PG2099|3end_ATP-dependent_RNA_helicase,_DEAD/DEAH_box_family_2206649..2206799_NEGATIVE 384 166 121 116 59 NC_002950:PG1855|3end_carboxyl-terminal_protease_1953842..1953992_NEGATIVE 383 108 62 56 17 NC_002950:PG0332|3end_transcription_termination_factor_Rho_367675..367825_POSITIVE 382 103 63 139 100 NC_002950:PG2127|3end_hypothetical_protein_2233109..2233259_NEGATIVE 379 632 591 53 16 NC_002950:PG1802|3end_hypothetical_protein_1896558..1896708_POSITIVE 378 149 101 51 5 NC_002950:PG1115|3end_signal_recognition_particle_protein_1188887..1189037_POSITIVE 376 1338 1292 82 26 NC_002950:PG2140|3end_ribosomal_protein_L32_2246399..2246549_POSITIVE 376 456 414 130 96 NC_002950:PG1497|3end_DNA-binding_protein,_histone-like_family_1574635..1574785_POSITIVE 373 328 286 145 95 NC_002950:PG1980|3end_hypothetical_protein_2067760..2067910_NEGATIVE