Origin IGS: taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccggctttgttccttataatatataccttatgcgtgccgctccccgtggagtcgatcagaccctcgcgatcgaaagcgcgcaattcttccgcggcagcggtacgtcccagccccgtaagtctgcaataatcggccaccttgagcagactatggccatcgagatggcgcaaggccaaggccagccgctcttcgcgagtcaaattgggccgacggggacggcgtaccgtagttcgcaccagatgaacgcgagtacgagcctcgagaatcaatgccttgtcggggcggaaattgacacctcctatcgtcacgctggcggcattacggcgtgtgccgccttcggcctcctcgggttctacgcctttgtgcaaggtgagcgaagcggagaaagagccgatctcctctatcttcaccgtatatcccgaagccacgccgtgggctatcgtccgagccaaggccgtaaccaaccctttgacttcacccggggagaatgtcgattgggaggaaatcagatcggctatctcgtccagccccatcgtgcctcggctgatcattttcggatacatcgtccgcttgcccgtgccttgcatatcgggcatttctctcatcacaaacttggccatttcttctgtacagctatatcggtttactcatcgccggtcgattgttttcttccgggccgggaaaatttttcccgacaaccgacaaaaataaattttccggccggaaaatctctgtccgaagccttcggatatataaataaagtctttggatatatgttcaaaagctttgtttatatatccgaaacctttgaataaagaattgcaggacggctttccaacttttccgtactgcagaaaaaactttctccggccggaactgatcatttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 atcgatgggtatatctctattttttcgagagagccgagtgcgctcactccttcacgggcaaaagtatgaatatctgccgtatcaatgctttaatatgtcatttcttagtcttcatcggttatttctgtctgtttctttattttataaatgatcagttccggccggagaaagttttttctgcagtacggaaaagttggaaagccgtcctgcaattctttattcaaaggtttcggatatataaacaaagcttttgaacatatatccaaagactttatttatatatccgaaggcttcggacagagattttccggccggaaaatttatttttgtcggttgtcgggaaaaattttcccggcccggaagaaaacaatcgaccggcgatgagtaaaccgatatagctgtacagaagaaatggccaagtttgtgatgagagaaatgcccgatatgcaaggcacgggcaagcggacgatgtatccgaaaatgatcagccgaggcacgatggggctggacgagatagccgatctgatttcctcccaatcgacattctccccgggtgaagtcaaagggttggttacggccttggctcggacgatagcccacggcgtggcttcgggatatacggtgaagatagaggagatcggctctttctccgcttcgctcaccttgcacaaaggcgtagaacccgaggaggccgaaggcggcacacgccgtaatgccgccagcgtgacgataggaggtgtcaatttccgccccgacaaggcattgattctcgaggctcgtactcgcgttcatctggtgcgaactacggtacgccgtccccgtcggcccaatttgactcgcgaagagcggctggccttggccttgcgccatctcgatggccatagtctgctcaaggtggccgattattgcagacttacggggctgggacgtaccgctgccgcggaagaattgcgcgctttcgatcgcgagggtctgatcgactccacggggagcggcacgcataaggtatatattataaggaacaaagccgggatctgacaaggcgggaagaccaccgttacgggctttttgcgttcttaagaattgcgctatttttgtgtgtgcaaagaaagatgtgtcggataggcgaaccttgctcttgcccagttgagagtccgagtcgttgccgggagacagagagagaaaggtattcgccgaatttttttgtgcagtctaacctcataacatagattta Mask Tandem Repeat Region ================================================ taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccggctttgttccttataatatataccttatgcgtgccgctccccgtggagtcgatcagaccctcgcgatcgaaagcgcgcaattcttccgcggcagcggtacgtcccagccccgtaagtctgcaataatcggccaccttgagcagactatggccatcgagatggcgcaaggccaaggccagccgctcttcgcgagtcaaattgggccgacggggacggcgtaccgtagttcgcaccagatgaacgcgagtacgagcctcgagaatcaatgccttgtcggggcggaaattgacacctcctatcgtcacgctggcggcattacggcgtgtgccgccttcggcctcctcgggttctacgcctttgtgcaaggtgagcgaagcggagaaagagccgatctcctctatcttcaccgtatatcccgaagccacgccgtgggctatcgtccgagccaaggccgtaaccaaccctttgacttcacccggggagaatgtcgattgggaggaaatcagatcggctatctcgtccagccccatcgtgcctcggctgatcattttcggatacatcgtccgcttgcccgtgccttgcatatcgggcatttctctcatcacaaacttggccatttcttctgtacagctatatcggtttactcatcgccggtcgattgttttcttccgggccgggaaaatttttcccgacaaccgacaaaaataaattttccggccggaaaatctctgtccgaagccttcggatatataaataaagtctttggatatatgttcaaaagctttgtttatatatccgaaacctttgaataaagaattgcaggacggctttccaacttttccgtactgcagaaaaaactttctccggccggaactgatcatttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Find is-nt database================================================ Query_seq: PG1961:PG1963|PG1961:PG1963:hypothetical protein:Sua5/YciO/YrdC/YwlC family protein:<-->:2051244..2052477 1234 taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccggctttgttccttataatatataccttatgcgtgccgctccccgtggagtcgatcagaccctcgcgatcgaaagcgcgcaattcttccgcggcagcggtacgtcccagccccgtaagtctgcaataatcggccaccttgagcagactatggccatcgagatggcgcaaggccaaggccagccgctcttcgcgagtcaaattgggccgacggggacggcgtaccgtagttcgcaccagatgaacgcgagtacgagcctcgagaatcaatgccttgtcggggcggaaattgacacctcctatcgtcacgctggcggcattacggcgtgtgccgccttcggcctcctcgggttctacgcctttgtgcaaggtgagcgaagcggagaaagagccgatctcctctatcttcaccgtatatcccgaagccacgccgtgggctatcgtccgagccaaggccgtaaccaaccctttgacttcacccggggagaatgtcgattgggaggaaatcagatcggctatctcgtccagccccatcgtgcctcggctgatcattttcggatacatcgtccgcttgcccgtgccttgcatatcgggcatttctctcatcacaaacttggccatttcttctgtacagctatatcggtttactcatcgccggtcgattgttttcttccgggccgggaaaatttttcccgacaaccgacaaaaataaattttccggccggaaaatctctgtccgaagccttcggatatataaataaagtctttggatatatgttcaaaagctttgtttatatatccgaaacctttgaataaagaattgcaggacggctttccaacttttccgtactgcagaaaaaactttctccggccggaactgatcatttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG1961:PG1963|PG1961:PG1963:hypothetical protein:Sua5/YciO/YrdC/YwlC family protein:<-->:2051244..2052477 1234 taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccggctttgttccttataatatataccttatgcgtgccgctccccgtggagtcgatcagaccctcgcgatcgaaagcgcgcaattcttccgcggcagcggtacgtcccagccccgtaagtctgcaataatcggccaccttgagcagactatggccatcgagatggcgcaaggccaaggccagccgctcttcgcgagtcaaattgggccgacggggacggcgtaccgtagttcgcaccagatgaacgcgagtacgagcctcgagaatcaatgccttgtcggggcggaaattgacacctcctatcgtcacgctggcggcattacggcgtgtgccgccttcggcctcctcgggttctacgcctttgtgcaaggtgagcgaagcggagaaagagccgatctcctctatcttcaccgtatatcccgaagccacgccgtgggctatcgtccgagccaaggccgtaaccaaccctttgacttcacccggggagaatgtcgattgggaggaaatcagatcggctatctcgtccagccccatcgtgcctcggctgatcattttcggatacatcgtccgcttgcccgtgccttgcatatcgggcatttctctcatcacaaacttggccatttcttctgtacagctatatcggtttactcatcgccggtcgattgttttcttccgggccgggaaaatttttcccgacaaccgacaaaaataaattttccggccggaaaatctctgtccgaagccttcggatatataaataaagtctttggatatatgttcaaaagctttgtttatatatccgaaacctttgaataaagaattgcaggacggctttccaacttttccgtactgcagaaaaaactttctccggccggaactgatcatttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG1961:PG1963|PG1961:PG1963:hypothetical protein:Sua5/YciO/YrdC/YwlC family protein:<-->:2051244..2052477 1234 taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccggctttgttccttataatatataccttatgcgtgccgctccccgtggagtcgatcagaccctcgcgatcgaaagcgcgcaattcttccgcggcagcggtacgtcccagccccgtaagtctgcaataatcggccaccttgagcagactatggccatcgagatggcgcaaggccaaggccagccgctcttcgcgagtcaaattgggccgacggggacggcgtaccgtagttcgcaccagatgaacgcgagtacgagcctcgagaatcaatgccttgtcggggcggaaattgacacctcctatcgtcacgctggcggcattacggcgtgtgccgccttcggcctcctcgggttctacgcctttgtgcaaggtgagcgaagcggagaaagagccgatctcctctatcttcaccgtatatcccgaagccacgccgtgggctatcgtccgagccaaggccgtaaccaaccctttgacttcacccggggagaatgtcgattgggaggaaatcagatcggctatctcgtccagccccatcgtgcctcggctgatcattttcggatacatcgtccgcttgcccgtgccttgcatatcgggcatttctctcatcacaaacttggccatttcttctgtacagctatatcggtttactcatcgccggtcgattgttttcttccgggccgggaaaatttttcccgacaaccgacaaaaataaattttccggccggaaaatctctgtccgaagccttcggatatataaataaagtctttggatatatgttcaaaagctttgtttatatatccgaaacctttgaataaagaattgcaggacggctttccaacttttccgtactgcagaaaaaactttctccggccggaactgatcatttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 5 Min: 206 Max: 1087 Len: 882 Subject: UniRef90_Q89YX9 Cluster: Hypothetical protein; n=1; Bacteroides thetaiotaomicron|Rep: Hypothetical protein - Bacteroides thetaiotaomicron HSP 1 e-value: 1.0E-27 bit: 127.0 Len: 618 Query Start:206 Query End:823 Subject Strand: null Subject Start: 1 Subject End: 210 ............................................................................................................................................................................................................. M A K F V M R E M P D M Q G T G K R T M Y P K M I S R G T M G L D E I A D L I S S Q S T F S P G E V K G L V T A L A R T I A H G V A S G Y T V K I E E I G S F S A S L T L H K G V E P E E A E G G T R - R N A A S V T I G G V N F R P D K A L I L E A - X X X X X X X X X X X X X X X X X X X X X X X X X X X X X R H L D G H S L L K V A D Y C R L T G L G R T A A A E E L R A F D - - R E G L I D S T G S G T H K V Y I I R N K A ........................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................. M A R Y I M E E M P D I Q K T G K R I T Y P K F A R I D N A S I K E L A Q R V G D V S G F S A G D I E G V L L Q T A I E M A H L M A E G R S V K I D G I G T F T P S L A L C R D K E R E E A E E G A K H R N A Q S I C V G G V N F R A D R T M I R N I N E R C R L E R A P W K P Q R S S K K F T P E Q R L T L A L K F L D E H A F L T V R N Y Q R L T G L L Q T A A T K E L K Q W A D L P E S G I D I A G R G S H R V Y V K K K V A ........................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_Q7MWF5 Cluster: Hypothetical protein; n=1; Porphyromonas gingivalis|Rep: Hypothetical protein - Porphyromonas gingivalis (Bacteroides gingivalis) HSP 1 e-value: 5.0E-18 bit: 95.1 Len: 195 Query Start:821 Query End:1015 Subject Strand: null Subject Start: 5 Subject End: 69 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H F F C T A I S V Y S S P V D C F L P G R E N F S R Q P T K I N F P A G K S L S E A F G Y I N K V F G Y M F K S F V Y I S E T F E ........................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H F F R G L Y R F Y S S P F D C F L S G R E K F P R Q P T K I I F P A G K A L S K A F G Y V S K A F V H I Y E S F V Y I S E T F E ........................................................................................................................................................................................................................... Subject: UniRef90_Q7MWA9 Cluster: Hypothetical protein; n=1; Porphyromonas gingivalis|Rep: Hypothetical protein - Porphyromonas gingivalis (Bacteroides gingivalis) HSP 1 e-value: 1.0E-12 bit: 77.0 Len: 150 Query Start:938 Query End:1087 Subject Strand: null Subject Start: 1 Subject End: 50 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M I S S G R R K F F L Q Y G K V G K P S C N S L F K G F G Y I N K A F E H I S K D F I Y I S E G F G ................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M I V L S R K K F F L Q Y R K V E K L Y C N S L F K G F G Y I N E A F G Y V S K G F V Y I S E G F G ................................................................................................................................................... Subject: UniRef90_Q64NA6 Cluster: Hypothetical protein; n=1; Bacteroides fragilis|Rep: Hypothetical protein - Bacteroides fragilis HSP 1 e-value: 2.0E-12 bit: 76.3 Len: 600 Query Start:221 Query End:820 Subject Strand: null Subject Start: 3 Subject End: 197 ............................................................................................................................................................................................................................ A K F V M R E M P D M Q G T G K R T - M Y P K M I S R G T M G L D E I A D L I S S Q S T F S P G E V K G L V T A L A R T I A H G V A S G Y T V K I E E I G S F S A S L T L H K G V E P E E A E G G T R R N A A S V T I G G V N F R P D K A L I L E A X X X X X X X X X X X X X X X X X X X X X X X X X X X X X R H L D G H S L L K V A D Y C R L T G L G R T A A A E E L R A F D R E G L I D S T G S G T H K V Y I .............................................................................................................................................................................................................................................................................................................................................................................................................................. ............................................................................................................................................................................................................................ A R Y D F R E V P S K K G N G E E P K L Y P H I V S G G T I R T R T I L E E I S E A S T F T V G D L E G V L C A L T E K I S K Y L V D G Y H V E L G K I G Y F S A S L - - - K A T H P V K D K K E I R - - A Q S I Y F D N V N F R A - S M W F R R H T S G Y V E R A G K Y G S R S S S Q L S E E E K L F R L E R Y L N E N A F I T R S D Y T R L T G R L K N K A L E D L N H F V S Q G V I E R R G R G S L L V F I .............................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q8A060 Cluster: Hypothetical protein; n=1; Bacteroides thetaiotaomicron|Rep: Hypothetical protein - Bacteroides thetaiotaomicron HSP 1 e-value: 7.0E-9 bit: 64.7 Len: 609 Query Start:212 Query End:820 Subject Strand: null Subject Start: 3 Subject End: 198 ................................................................................................................................................................................................................... A K F V M R E M P D M Q G T G K - R T M Y P K M I S R G T M G L D E I A D L I S S Q S T F S P G E V K G L V T A L A R T I A H G V A S G Y T V K I E E I G S F S A S L T L H K G V E P E E A E G G T R R N A A S V T I G G V N F R P D K A L I L E A X X X X X X X X X X X X X X X X X X X X X X X X X X X X X R H L D G H S L L K V A D Y C R L T G L G R T A A A E E L R A F D R E G L I D S T G S G T H K V Y I I R N .............................................................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................... A D Y D F R R K P N E K G D G E V Q P L Y P R I V S K G T I D S K R L F R E I A E A S S F T E G D L A G I M V A F Q E K V S Y Y L S E G Y H V K L G E I G Y F S S S L K A R P V M D K K E I - - - - - - R S V S I S F D N V N F R A T P - - W F R R R S S G T V T R A K F G F Q E S S N L P E E T R R S R L E A F L A K N H F I T R R E Y S Q I T G L L K G K A L R E L N L L V E N G V L N T R G Y G N R V V Y L K P N .............................................................................................................................................................................................................................................................................................................................................................................................................................. taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Predict ORF larger than 30AA ================================================ Protein_Len: 40 Strand: + Start: 24 End: 143 ....................... M H K K I R R I P F S L C L P A T T R T L N W A R A R F A Y P T H L S L H T Q K ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: + Start: 4 End: 174 ... M Y V M R L D C T K K F G E Y L S L S V S R Q R L G L S T G Q E Q G S P I R H I F L C T H K N S A I L K N A K S P .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 226 End: 318 ................................................................................................................................................................................................................................. M P Y A C R S P W S R S D P R D R K R A I L P R Q R Y V P A P .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 50 Strand: + Start: 180 End: 329 ................................................................................................................................................................................... M V F P P C Q I P A L F L I I Y T L C V P L P V E S I R P S R S K A R N S S A A A V R P S P V S L Q ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: + Start: 342 End: 443 ..................................................................................................................................................................................................................................................................................................................................................... M S R L W P S R W R K A K A S R S S R V K L G R R G R R T V V R T R ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 468 End: 911 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M N A L S G R K L T P P I V T L A A L R R V P P S A S S G S T P L C K V S E A E K E P I S S I F T V Y P E A T P W A I V ................................................................................................................................................................................................................................................................................................................................... Protein_Len: 44 Strand: + Start: 829 End: 960 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M Y S Y I G L L I A G R L F S S G P G K F F P T T D K N K F S G R K I S V R S L R I Y K .................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 59 End: 1015 .......................................................... M S P G N D S D S Q L G K S K V R L S D T S F F A H T K I A Q F L R T Q K A R N G G L P A L S D P G F V P Y N I Y L M R ........................................................................................................................................................................................................................... Protein_Len: 56 Strand: + Start: 960 End: 1127 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M K S L D I C S K A L F I Y P K P L N K E L Q D G F P T F P Y C R K N F L R P E L I I Y K I K K Q T E I T D E D ........................................................................................................... Protein_Len: 48 Strand: - Start: 1087 End: 1230 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. K Y F L S V S L F L R H L S L F S M N F C Q Y P L Y E Y K Q G H L L S R V R S E R F F L S I G M .... Protein_Len: 60 Strand: - Start: 984 End: 1169 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q K Y I R F R Q I F F Q L V A K W S K R V A S F V K E P R F Q D N I F Y L F L C F Y G I F V L F H C I L A N I R C I N M ................................................................. Protein_Len: 60 Strand: - Start: 854 End: 1087 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... F Y I K R G S F R Q G F G E S I Y I F D K S I H E F A K N I Y G F G K F L S N C S P K G V K G Y Q L F F K R R G S S I M ................................................................................................................................................... Protein_Len: 45 Strand: - Start: 850 End: 984 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. E D G T S Q K R G P R S F K E R C G V F I F K G A P F D R D S A K P Y I F L T K P Y I N M .......................................................................................................................................................................................................................................................... Protein_Len: 45 Strand: - Start: 840 End: 974 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I P K S M A P R N N E E P G P F N K G V V S L F L N E P R F I E T R L R R I Y L Y L R Q M .................................................................................................................................................................................................................................................................... Protein_Len: 52 Strand: - Start: 681 End: 836 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ G P L I D I P L F D S R S D R G A G D H R P Q D N E S V D D A Q G H R A Y R A N R E D C V Q G N R R Y M .............................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 32 Strand: - Start: 525 End: 620 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ P T H R R R G G R T R R R Q A L H A F R L F L R D G R D E G Y M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 40 Strand: - Start: 354 End: 473 ................................................................................................................................................................................................................................................................................................................................................................. P W R S P A L G L G A A R R S D F Q A S P S P T G Y N A G S S R S Y S G R S D M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: - Start: 262 End: 366 ..................................................................................................................................................................................................................................................................... V R A I S L A C N K R P L P V D W G R L D A I I P W R S C V I A M S M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: - Start: 234 End: 329 ......................................................................................................................................................................................................................................... A H R E G H L R D S G R S R F R A I R G R C R Y T G A G Y T Q M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 200 End: 823 ....................................................................................................................................................................................................... T R A L A T V L G K V E G P S F T S Q S S I L D A I E D L G M T G R S I M K P Y M T R K G T G Q M D P M E R M V F K A M ........................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 9 End: 227 ........ R E R E T E R C R S P S E V P C S C P E G I R C M K R Q V C L F L A I R L F A F L G Y R H D E R R T L D R S Q E K Y Y M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 81 HP_score: -6.2 Tail_Score: -4.97405 Start: 916 End: 931 Full_Region: ggcttcggacagaga ttttcc ggcc ggaaaa tttatttttgtcggt ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttttccggccggaaaa............................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 42 HP_score: -2.0 Tail_Score: -3.11738 Start: 1024 End: 1056 Full_Region: ggagaaagttttttc tgcagtacgg aaaagttggaaag ccgtcctgca attctttattcaaag ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgcagtacggaaaagttggaaagccgtcctgca.................................................................................................................................................................................. Find igs database================================================ Query_seq: PG1961:PG1963|PG1961:PG1963:hypothetical protein:Sua5/YciO/YrdC/YwlC family protein:<-->:2051244..2052477 1234 taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Intra-Species Hit: Count: 1 Min: 1 Max: 1234 Len: 1234 Subject: NC_002950_PG1961_PG1963|hypothetical protein:Sua5/YciO/YrdC/YwlC family protein|NEGATIVE:POSITIVE|[2051244,2052477]|1234 HSP 1 e-value: 2.0E-99 bit: 365.0 Len: 205 Query Start:1 Query End:205 Subject Strand: POSITIVE Subject Start: 1 Subject End: 205 taaatctatgttatgaggttagactgcacnnnnnnnttcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatccc..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... taaatctatgttatgaggttagactgcacaaaaaaattcggcgaatacctttctctctctgtctcccggcaacgactcggactctcaactgggcaagagcaaggttcgcctatccgacacatctttctttgcacacacaaaaatagcgcaattcttaagaacgcaaaaagcccgtaacggtggtcttcccgccttgtcagatccc..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-77 bit: 291.0 Len: 147 Query Start:1088 Query End:1234 Subject Strand: POSITIVE Subject Start: 1088 Subject End: 1234 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttataaaataaagaaacagacagaaataaccgatgaagactaagaaatgacatattaaagcattgatacggcagatattcatacttttgcccgtgaaggagtgagcgcactcggctctctcgaaaaaatagagatatacccatcgat Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UAAAUCUAUGUUAUGAGGUUAGACUGCACAAAAAAAUUCGGCGAAUACCUUUCUCUCUCUGUCUCCCGGCAACGACUCGGACUCUCAACUGGGCAAGAGCAAGGUUCGCCUAUCCGACACAUCUUUCUUUGCACACACAAAAAUAGCGCAAUUCUUAAGAACGCAAAAAGCCCGUAACGGUGGUCUUCCCGCCUUGUCAGAUCCCGGCUUUGUUCCUUAUAAUAUAUACCUUAUGCGUGCCGCUCCCCGUGGAGUCGAUCAGACCCUCGCGAUCGAAAGCGCGCAAUUCUUCCGCGGCAGCGGUACGUCCCAGCCCCGUAAGUCUGCAAUAAUCGGCCACCUUGAGCAGACUAUGGCCAUCGAGAUGGCGCAAGGCCAAGGCCAGCCGCUCUUCGCGAGUCAAAUUGGGCCGACGGGGACGGCGUACCGUAGUUCGCACCAGAUGAACGCGAGUACGAGCCUCGAGAAUCAAUGCCUUGUCGGGGCGGAAAUUGACACCUCCUAUCGUCACGCUGGCGGCAUUACGGCGUGUGCCGCCUUCGGCCUCCUCGGGUUCUACGCCUUUGUGCAAGGUGAGCGAAGCGGAGAAAGAGCCGAUCUCCUCUAUCUUCACCGUAUAUCCCGAAGCCACGCCGUGGGCUAUCGUCCGAGCCAAGGCCGUAACCAACCCUUUGACUUCACCCGGGGAGAAUGUCGAUUGGGAGGAAAUCAGAUCGGCUAUCUCGUCCAGCCCCAUCGUGCCUCGGCUGAUCAUUUUCGGAUACAUCGUCCGCUUGCCCGUGCCUUGCAUAUCGGGCAUUUCUCUCAUCACAAACUUGGCCAUUUCUUCUGUACAGCUAUAUCGGUUUACUCAUCGCCGGUCGAUUGUUUUCUUCCGGGCCGGGAAAAUUUUUCCCGACAACCGACAAAAAUAAAUUUUCCGGCCGGAAAAUCUCUGUCCGAAGCCUUCGGAUAUAUAAAUAAAGUCUUUGGAUAUAUGUUCAAAAGCUUUGUUUAUAUAUCCGAAACCUUUGAAUAAAGAAUUGCAGGACGGCUUUCCAACUUUUCCGUACUGCAGAAAAAACUUUCUCCGGCCGGAACUGAUCAUUUAUAAAAUAAAGAAACAGACAGAAAUAACCGAUGAAGACUAAGAAAUGACAUAUUAAAGCAUUGAUACGGCAGAUAUUCAUACUUUUGCCCGUGAAGGAGUGAGCGCACUCGGCUCUCUCGAAAAAAUAGAGAUAUACCCAUCGAU ......((((((((((((...(((.((............(((((..(((((.((((...((((....))))..(.(((((........)))))).)))).)))))))))).(((.((((..((((...((((.(...........).)))).....))))..................(((((.....))))).)))).)))....))...))))))))))))))).......(((((((.(((((....)))))(((((.(.....)..)))))...)))))))........(((((.((((((((((....((((((.(((((((.....((((.....)))))))))))..((((...(((.((((....(((....))).)))))))..(....)........)))).))))))..)))))))))).).))))....((((....(((((.((..((((....((((((((...(((((((((((..((((..((((((((((.((((..((((((((........))))))))..))..((((((((((..((((.(((((.((..((((((.((((.(((((.........))))).)).))))))))........(((((((........)))).))).....))))))).))))..(((....))).....))))))))))..)).))).)))))))...))))...((((.........))))...)).)))))))))...((((((((((((.....)))))..(((((((((...)))...))))))..(((.(((((........((..(((((((((((.........((((((.........((((..((......))..))))..((((((.....))))))..))))))............(((((((((((...(((.(((.(((((..(((((((((((((((((((..(((((((....)))))))..)))))))))))))))))))..))))).))).))).((((((.((((.............)))).))))))...........))))))))))).......................))))).))))))..))))))))))....))))))).........))))))))..((((((..........)))))).......))).)..)).)))))....((((.........))))......))))... (-425.12) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUCGAUGGGUAUAUCUCUAUUUUUUCGAGAGAGCCGAGUGCGCUCACUCCUUCACGGGCAAAAGUAUGAAUAUCUGCCGUAUCAAUGCUUUAAUAUGUCAUUUCUUAGUCUUCAUCGGUUAUUUCUGUCUGUUUCUUUAUUUUAUAAAUGAUCAGUUCCGGCCGGAGAAAGUUUUUUCUGCAGUACGGAAAAGUUGGAAAGCCGUCCUGCAAUUCUUUAUUCAAAGGUUUCGGAUAUAUAAACAAAGCUUUUGAACAUAUAUCCAAAGACUUUAUUUAUAUAUCCGAAGGCUUCGGACAGAGAUUUUCCGGCCGGAAAAUUUAUUUUUGUCGGUUGUCGGGAAAAAUUUUCCCGGCCCGGAAGAAAACAAUCGACCGGCGAUGAGUAAACCGAUAUAGCUGUACAGAAGAAAUGGCCAAGUUUGUGAUGAGAGAAAUGCCCGAUAUGCAAGGCACGGGCAAGCGGACGAUGUAUCCGAAAAUGAUCAGCCGAGGCACGAUGGGGCUGGACGAGAUAGCCGAUCUGAUUUCCUCCCAAUCGACAUUCUCCCCGGGUGAAGUCAAAGGGUUGGUUACGGCCUUGGCUCGGACGAUAGCCCACGGCGUGGCUUCGGGAUAUACGGUGAAGAUAGAGGAGAUCGGCUCUUUCUCCGCUUCGCUCACCUUGCACAAAGGCGUAGAACCCGAGGAGGCCGAAGGCGGCACACGCCGUAAUGCCGCCAGCGUGACGAUAGGAGGUGUCAAUUUCCGCCCCGACAAGGCAUUGAUUCUCGAGGCUCGUACUCGCGUUCAUCUGGUGCGAACUACGGUACGCCGUCCCCGUCGGCCCAAUUUGACUCGCGAAGAGCGGCUGGCCUUGGCCUUGCGCCAUCUCGAUGGCCAUAGUCUGCUCAAGGUGGCCGAUUAUUGCAGACUUACGGGGCUGGGACGUACCGCUGCCGCGGAAGAAUUGCGCGCUUUCGAUCGCGAGGGUCUGAUCGACUCCACGGGGAGCGGCACGCAUAAGGUAUAUAUUAUAAGGAACAAAGCCGGGAUCUGACAAGGCGGGAAGACCACCGUUACGGGCUUUUUGCGUUCUUAAGAAUUGCGCUAUUUUUGUGUGUGCAAAGAAAGAUGUGUCGGAUAGGCGAACCUUGCUCUUGCCCAGUUGAGAGUCCGAGUCGUUGCCGGGAGACAGAGAGAGAAAGGUAUUCGCCGAAUUUUUUUGUGCAGUCUAACCUCAUAACAUAGAUUUA .....(((((((((((((.((((((((((.((((.......)))).)))..((((((((.(((((((..((((.....))))..))))))).........................((((((((((.(((((.............((((((....((((((((((((((.........(((((.((((.............)))).)))))..(((((.(((.(((.(((((((((((((((.((((((((.((.......)).)))).)))).))))))))))))))).))).))).)))))))))))))))))))...)))))).((((((((((((((((.....))))))))((((..((......))..)))).........)))))))).......)))))))))))))))..)))))))).))))))).((((((...(((...)))))))))...))).)))))))))).....((((.((....))...((((((.(((((....((((((((((((((((..(((................))).))))))...))))))))))((((..((((((((((....((..((((((((.(((((((...((((((((((.....(((((.........))))).))))))...((((.....))))))))...)))))))..((((....)))).))))))))..(((((((..((((.((((.((((((((((((((((((((((.((((((.........((((((((((.((((((.(((..(((..(((...((((....)))).....)))..)))...)))..)))).)).)))...))))))))))))).(((((....)))))...(((((((....((...)).......)))))))..)))))).))......((((....))))..)))))).)))))))).))))...(((((.....)))))))))..).)))))).))....((((.......(((((......(((...((((((((..((((((((....(((...))).))))))))..((((.....(((((((((....))).))))))...))))..)))))))).)))...)))))....)))).........))))))))))..))))....(((((((((....(((....)))...)))))))))...))))).))))))......)))).. (-452.41) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1116 110 61 201 152 NC_002950:PG1961|5end_hypothetical_protein_2051153..2051383_NEGATIVE 648 885 841 231 186 NC_002950:PG0661|5end_hypothetical_protein_709853..710083_NEGATIVE 562 1050 1001 54 5 NC_002950:PG0722|5end_hypothetical_protein_774891..775121_NEGATIVE 524 538 498 59 3 NC_002950:PG2102|5end_immunoreactive_61_kDa_antigen_PG91_2213046..2213276_NEGATIVE 494 560 512 196 146 NC_002950:PG0212|5end_precorrin-6Y_C5,15-methyltransferase,_decarboxylating_249065..249295_NEGATIVE 491 670 622 68 19 NC_002950:PG0362|5end_hypothetical_protein_395301..395531_POSITIVE 481 557 513 44 2 NC_002950:PG1297|5end_ribosomal_protein_S1_1375831..1376061_POSITIVE 480 399 353 220 152 NC_002950:PG0489|5end_polysaccharide_biosynthesis-related_protein_529247..529477_POSITIVE 466 429 381 148 92 NC_002950:PG0463|5end_folylpolyglutamate_synthase_507606..507836_NEGATIVE 464 560 512 203 137 NC_002950:PG2107|5end_thiamine_biosynthesis_protein_ThiH_2216658..2216888_NEGATIVE 458 280 234 57 9 NC_002950:PG0285|5end_hypothetical_protein_318459..318689_POSITIVE 450 397 354 165 118 NC_002950:PG1964|5end_bacterial_sugar_transferase_2052910..2053140_POSITIVE 450 562 522 167 117 NC_002950:PG0715|5end_transporter_769596..769826_NEGATIVE 448 570 525 208 158 NC_002950:PG0558|5end_purine_nucleoside_phosphorylase_616331..616561_NEGATIVE 448 578 531 55 4 NC_002950:PG0228|5end_DdaH_family_protein_264950..265180_NEGATIVE 447 559 513 63 9 NC_002950:PG0004|5end_NAD-dependent_deacetylase_2968..3198_POSITIVE 446 399 354 107 55 NC_002950:PG0223|5end_exonuclease_257610..257840_NEGATIVE 445 359 313 60 8 NC_002950:PG2054|5end_lipoprotein_PG3_2152014..2152244_NEGATIVE 443 310 265 202 141 NC_002950:PG0151|5end_signal_recognition_particle-docking_protein_FtsY_174494..174724_NEGATIVE 441 290 241 120 73 NC_002950:PG2027|5end_hypothetical_protein_2125494..2125724_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 837 960 911 116 67 NC_002950:PG0722|3end_hypothetical_protein_774739..774889_NEGATIVE 466 429 381 151 95 NC_002950:PG0464|3end_adenylosuccinate_synthetase_507603..507753_NEGATIVE 450 280 233 65 2 NC_002950:PG2110|3end_thiamine_biosynthesis_protein_ThiC_2219449..2219599_NEGATIVE 449 660 615 121 64 NC_002950:PG1675|3end_hypothetical_protein_1760360..1760510_POSITIVE 446 399 354 103 51 NC_002950:PG0224|3end_hypothetical_protein_257614..257764_NEGATIVE 446 769 722 128 74 NC_002950:PG0213|3end_precorrin-3_methylase/precorrin-8X_methylmutase_249058..249208_NEGATIVE 445 400 356 51 6 NC_002950:PG0754|3end_DNA_topoisomerase_I_803389..803539_POSITIVE 441 290 241 91 44 NC_002950:PG2026|3end_phosphoglycerate_mutase_family_protein_2125545..2125695_POSITIVE 440 419 374 125 73 NC_002950:PG0424|3end_hypothetical_protein_463213..463363_POSITIVE 439 390 342 113 48 NC_002950:PG1578|3end_quinolinate_synthetase_1656472..1656622_POSITIVE 439 508 461 82 22 NC_002950:PG0052|3end_sensor_histidine_kinase_64686..64836_POSITIVE 438 554 511 133 82 NC_002950:PG0330|3end_DNA-binding_protein,_histone-like_family_364478..364628_NEGATIVE 436 549 505 149 99 NC_002950:PG1115|3end_signal_recognition_particle_protein_1188887..1189037_POSITIVE 435 327 282 78 32 NC_002950:PG0211|3end_cobalamin_biosynthesis_protein_CbiG/precorrin-4_C11-methyltransferase_245966..246116_NEGATIVE 432 347 306 143 92 NC_002950:PG1851|3end_phosphopantothenoylcysteine_decarboxylase/phosphopantothenate--cysteine_ligase_1949954..1950104_NEGATIVE 432 410 364 70 13 NC_002950:PG0790|3end_GTP-binding_protein_Obg_841399..841549_NEGATIVE 430 340 293 125 66 NC_002950:PG1972|3end_hemagglutinin_protein_HagB_2061203..2061353_POSITIVE 430 587 541 141 97 NC_002950:PG0250|3end_hypothetical_protein_283905..284055_NEGATIVE 427 589 543 58 5 NC_002950:PG0296|3end_phosphoribosylformylglycinamidine_synthase_331293..331443_NEGATIVE 426 570 526 82 41 NC_002950:PG0507|3end_hypothetical_protein_548190..548340_POSITIVE