Origin IGS: tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatgagacctttgaaaaataaggaaatggagggaagaggaattcttcacataaaacggggggagggaaaaggggtggcagtaaggagtgaaagtagttgtaaatcccccttgaggagctacttgcacgagctcctcaaggggggttatgccttatcctacggatgaggacataattatccccggcgttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccgccgaatactgccaaaggtgcgttcgatggtgctccgtatcggaccgattgctttgtttccttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgcgaagacggctgtgccttgaggtatgtttgcaccctgcaatagcggaataaactccttcgtgtcactgcgattcgctgctgtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctattatacaatgaattaacaaacaaaatacacactaattgccgtgcaaaggtctccttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 gtcgctgcatcggatataaataactttaatagagagggcgagctagaacagatgttctggatcgccttcttttttatgtccgaaaagaaaccgtggtctctttaaggagacctttgcacggcaattagtgtgtattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgacagcagcgaatcgcagtgacacgaaggagtttattccgctattgcagggtgcaaacatacctcaaggcacagccgtcttcgcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaaggaaacaaagcaatcggtccgatacggagcaccatcgaacgcacctttggcagtattcggcggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaacgccggggataattatgtcctcatccgtaggataaggcataaccccccttgaggagctcgtgcaagtagctcctcaagggggatttacaactactttcactccttactgccaccccttttccctccccccgttttatgtgaagaattcctcttccctccatttccttatttttcaaaggtctcataaaaacgctatcaaattaggattatgtcctatttctatccgaaactataaggctctattggaccttggtcgaagaatcaaattcgaactaacgaaaactaactctctgcggaatttggctttttaaggctctgctgtatgcgaagaaa Mask Tandem Repeat Region ================================================ tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatgagacctttgaaaaataaggaaatggagggaagaggaattcttcacataaaacggggggagggaaaaggggtggcagtaaggagtgaaagtagttgtaaatcccccttgaggagctacttgcacgagctcctcaaggggggttatgccttatcctacggatgaggacataattatccccggcgttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccgccgaatactgccaaaggtgcgttcgatggtgctccgtatcggaccgattgctttgtttccttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgcgaagacggctgtgccttgaggtatgtttgcaccctgcaatagcggaataaactccttcgtgtcactgcgattcgctgctgtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctattatacaatgaattaacaaacaaaatacacactaattgccgtgcaaaggtctccttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Find is-nt database================================================ Query_seq: PG1908:PG1910|PG1908:PG1910:hypothetical protein:ribosomal protein L17:-><-:2008781..2010371 1591 tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatgagacctttgaaaaataaggaaatggagggaagaggaattcttcacataaaacggggggagggaaaaggggtggcagtaaggagtgaaagtagttgtaaatcccccttgaggagctacttgcacgagctcctcaaggggggttatgccttatcctacggatgaggacataattatccccggcgttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccgccgaatactgccaaaggtgcgttcgatggtgctccgtatcggaccgattgctttgtttccttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgcgaagacggctgtgccttgaggtatgtttgcaccctgcaatagcggaataaactccttcgtgtcactgcgattcgctgctgtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctattatacaatgaattaacaaacaaaatacacactaattgccgtgcaaaggtctccttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 151 Max: 1485 Len: 1335 Subject: IS|IS1126 HSP 1 e-value: 0.0 bit: 2183.0 Len: 1335 Query Start:151 Query End:1485 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 1336 ......................................................................................................................................................gagacctttgaaaaataaggaaatggagggaagaggaattcttcacataaaacggggggagggaaaaggggtggcagtaaggagtgaaagtagttgtaaatccccc-ttgaggagctacttgcacgagctcctcaaggggggttatgccttatcctacggatgaggacataattatccccggcgttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccgccgaatactgccaaaggtgcgttcgatggtgctccgtatcggaccgattgctttgtttccttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgcgaagacggctgtgccttgaggtatgtttgcaccctgcaatagcggaataaactccttcgtgtcactgcgattcgctgctgtcgttatcaccttttgaacaatgccttgaacattggtc-agacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttggg-tttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccat----agccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctattatacaatgaattaacaaacaaaatacacactaattgccgtgcaaaggtctc.......................................................................................................... ......................................................................................................................................................gagacctttgcaaaataaggagatggagggaagaggagttcttggcaaaaaa-ggagcgagtgaaaaggg-tggcagtaaggagtgaaagtagttgtaaatccccccttgcggacgtacttgcacgagctcctcaaggggggttatgccttatcctagagatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatcggactgattgctttgtttccttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgccaagacggctgtgccttgaggtatgtttgcaccctgcaatagcggaataaactccttcgtgtcactgcggttcgctgctgtcgttatcaccttttgaacaatgccttgaacattggtcaagacaatgctttttgtatccgtagtgataacgcttttgtttgtacacccaac-ggcttcttcatccgtccctttacgccggcggacaacctgtttttgataatcctcctcgtcctctttttccgcctcgctccgattgtcttctctgttcgctgcgacttcaatcgtaatggttccgttgggctttatgtggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgag-cccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatcttcagtcccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgcc-atggcattttgtcgcttcgtgtatttcttgttgatca-cgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacgaaataacttcctattatacaatgaattaacaaacaaaatatacgccaatcgccgtgcaaaggtctc.......................................................................................................... Find is-aa database================================================ Query_seq: PG1908:PG1910|PG1908:PG1910:hypothetical protein:ribosomal protein L17:-><-:2008781..2010371 1591 tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG1908:PG1910|PG1908:PG1910:hypothetical protein:ribosomal protein L17:-><-:2008781..2010371 1591 tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Predict ORF larger than 30AA ================================================ Protein_Len: 54 Strand: + Start: 149 End: 310 .................................................................................................................................................... M R P L K N K E M E G R G I L H I K R G E G K G V A V R S E S S C K S P L R S Y L H E L L K G G Y A L S Y G ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 45 Strand: + Start: 400 End: 534 ............................................................................................................................................................................................................................................................................................................................................................................................................... M D I V R H E T T A E Y C Q R C V R W C S V S D R L L C F L A S L P R S M P C C V V P C A ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 38 Strand: + Start: 432 End: 545 ............................................................................................................................................................................................................................................................................................................................................................................................................................................... M L P K V R S M V L R I G P I A L F P C F S S S V N A L L R C A L C M M P S ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 344 End: 643 ....................................................................................................................................................................................................................................................................................................................................................... M K G D A F K N V L S M G L G K S P V S T S S A M K P P P N T A K G A F D G A P Y R T D C F V S L L L F L G Q C P V A L .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 679 End: 888 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M L S L S P F E Q C L E H W S D N A F C I R S D N A F V C K P N G L L H P S L Y A D G Q P V F D N P P L P L F P P R S D ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: + Start: 858 End: 962 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S S L S S A T S I V M L P L G L C G V S T R L A S T S T P S L T E M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 674 End: 997 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M R C C R Y H L L N N A L N I G Q T M L F V S V V I T L L F V N P T G F F I R P F T L T D N L F L I I L L C L F F L L A .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 40 Strand: + Start: 981 End: 1100 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M L N C A N S L S M S P N S V S A E R N R L M V L W S G D T S S I A P R I G K R ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 46 Strand: + Start: 1055 End: 1192 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M V G R Y L F H S P K N R E K V I E S L M R S S K A Q S L R L Y H V S K S N I L N K R I T S ............................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 43 Strand: + Start: 1192 End: 1320 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S R G A D G I L S L G V F L V D Q R P D R T P I D K P L N L I E E V V L C F A I T L ............................................................................................................................................................................................................................................................................... Protein_Len: 48 Strand: + Start: 1302 End: 1445 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M L C D N A L K G V R L Q M L H A H R Y S W I G M P W E E Y Y A V F N T Q I Y K I T P Y Y T M N .................................................................................................................................................. Protein_Len: 44 Strand: + Start: 1415 End: 1546 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q N N S L L Y N E L T N K I H T N C R A K V S L K R P R F L F G H K K E G D P E H L F ............................................. Protein_Len: 35 Strand: - Start: 1347 End: 1451 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M S M P I R P N T H W P L F I I S N K I S L Y V F Y S G I I C H I L M ............................................................................................................................................ Protein_Len: 32 Strand: - Start: 1245 End: 1340 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ R G S R V G I S L G R L R I S S T T K H K A I V S Q F S H T Q M ........................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 1027 End: 1389 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. A N Q R K T Y K K N I L T R I P R W D I L R E V Q N L F D N Q A K R Y R K S L L A D A F T V H E D T N K S Q Y A M P P M .......................................................................................................................................................................................................... Protein_Len: 51 Strand: - Start: 987 End: 1139 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... V A G I T Q G H A G V R D T G F S I S Q H H Q P R S I G R G Y G W S D P F P S Q I M S A S R W L V I M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 724 End: 966 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R G K V S V S L R N K I I R R Q R K K R R A G I T K E T T Q S K L R L A E T P N I R R R W L A Q M S L C G K G S R F T M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 35 Strand: - Start: 669 End: 773 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Q S E S S D N D G K S C H R S C Q D S L A K Q I R L S L A K T Q L G M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 56 Strand: - Start: 508 End: 675 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H G T A N H R T C S A T K F T I P K C T P V I K G A L M D K T R S S P Q A K L Y T Q V R C Y R F L S R R T V A M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 363 End: 644 .......................................................................................................................................................................................................................................................................................................................................................................... D S R N S Q K R A E R G R D I G Q Q T T G Q A H H R R S P S P N A P L F S K G R L C I R Q G R L R S H R S T H K C G A M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: - Start: 325 End: 441 .................................................................................................................................................................................................................................................................................................................................... G R R E T Y I L P S A K L F T K L I P R P L D G T D V D D A M F G G G F V A M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 302 End: 1090 ............................................................................................................................................................................................................................................................................................................. P T E V L S A D V L V G E R V S I H H R S L Q K N F Q A L L K D M L G L E T L A S R F R S I T S H D P S V E E M A G L M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: - Start: 150 End: 251 ..................................................................................................................................................... S V K S F Y P F P P F L F E E C L V P P P F L P P L L S H F Y N Y M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 26 End: 295 ......................... I P C L G L K I A N K H S R Q F I L F H L S S S N K V Y F P P L S F P H C Y P T F T T T F G G Q P A V Q V L E E L P T M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: - Score: 81 Start: 1412 End: 1441 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATAATAGGGAGTTATTTTGTATATT...................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 46 HP_score: -4.3 Tail_Score: -2.86689 Start: 118 End: 132 Full_Region: AGTTTCGGATAGAAA TAGGA CATAA TCCTA ATTTGATAGCGTTTT .....................................................................................................................TAGGACATAATCCTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 41 HP_score: -3.1 Tail_Score: -2.7411 Start: 178 End: 196 Full_Region: ctccccccgttttat gtgaaga attcc tcttccc tccatttccttattt .................................................................................................................................................................................gtgaagaattcctcttccc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -17.0 Tail_Score: -3.6003 Start: 251 End: 291 Full_Region: taggataaggcataa ccccccttgaggagct cgtgcaagt agctcctcaaggggga tttacaactactttc ..........................................................................................................................................................................................................................................................ccccccttgaggagctcgtgcaagtagctcctcaaggggga.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -19.2 Tail_Score: -3.45768 Start: 251 End: 291 Full_Region: GAAAGTAGTTGTAAA TCCCCCTTGAGGAGCT ACTTGCACG AGCTCCTCAAGGGGGG TTATGCCTTATCCTA ..........................................................................................................................................................................................................................................................TCCCCCTTGAGGAGCTACTTGCACGAGCTCCTCAAGGGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -20.5 Tail_Score: -2.66979 Start: 252 End: 290 Full_Region: AAAGTAGTTGTAAAT CCCCCTTGAGGAGCT ACTTGCACG AGCTCCTCAAGGGGG GTTATGCCTTATCCT ...........................................................................................................................................................................................................................................................CCCCCTTGAGGAGCTACTTGCACGAGCTCCTCAAGGGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -20.5 Tail_Score: -2.75536 Start: 252 End: 290 Full_Region: aggataaggcataac cccccttgaggagct cgtgcaagt agctcctcaaggggg atttacaactacttt ...........................................................................................................................................................................................................................................................cccccttgaggagctcgtgcaagtagctcctcaaggggg..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 71 HP_score: -9.5 Tail_Score: -3.29461 Start: 292 End: 321 Full_Region: GCTCCTCAAGGGGGG TTATGCCTTATCC TAC GGATGAGGACATAA TTATCCCCGGCGTTC ...................................................................................................................................................................................................................................................................................................TTATGCCTTATCCTACGGATGAGGACATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 43 HP_score: -3.4 Tail_Score: -2.60808 Start: 506 End: 523 Full_Region: CTTCTCTTCCTCGGT CAATGC CCTGTT GCGTTG TGCCTTGTGCATGAT .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCCCTGTTGCGTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 100 HP_score: -14.8 Tail_Score: -5.36441 Start: 1523 End: 1558 Full_Region: aataactttaataga gagggcgagctagaac agat gttctggatcgccttc ttttttatgtccgaa ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gagggcgagctagaacagatgttctggatcgccttc................................. Find igs database================================================ Query_seq: PG1908:PG1910|PG1908:PG1910:hypothetical protein:ribosomal protein L17:-><-:2008781..2010371 1591 tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Intra-Species Hit: Count: 1 Min: 1 Max: 1591 Len: 1591 Subject: NC_002950_PG1908_PG1910|hypothetical protein:ribosomal protein L17|POSITIVE:NEGATIVE|[2008781,2010371]|1591 HSP 1 e-value: 6.0E-79 bit: 297.0 Len: 150 Query Start:1 Query End:150 Subject Strand: POSITIVE Subject Start: 1 Subject End: 150 tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttat................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. tttcttcgcatacagcagagccttaaaaagccaaattccgcagagagttagttttcgttagttcgaatttgattcttcgaccaaggtccaatagagccttatagtttcggatagaaataggacataatcctaatttgatagcgtttttat................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-52 bit: 210.0 Len: 106 Query Start:1486 Query End:1591 Subject Strand: POSITIVE Subject Start: 1486 Subject End: 1591 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttaaagagaccacggtttcttttcggacataaaaaagaaggcgatccagaacatctgttctagctcgccctctctattaaagttatttatatccgatgcagcgac Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUUCUUCGCAUACAGCAGAGCCUUAAAAAGCCAAAUUCCGCAGAGAGUUAGUUUUCGUUAGUUCGAAUUUGAUUCUUCGACCAAGGUCCAAUAGAGCCUUAUAGUUUCGGAUAGAAAUAGGACAUAAUCCUAAUUUGAUAGCGUUUUUAUGAGACCUUUGAAAAAUAAGGAAAUGGAGGGAAGAGGAAUUCUUCACAUAAAACGGGGGGAGGGAAAAGGGGUGGCAGUAAGGAGUGAAAGUAGUUGUAAAUCCCCCUUGAGGAGCUACUUGCACGAGCUCCUCAAGGGGGGUUAUGCCUUAUCCUACGGAUGAGGACAUAAUUAUCCCCGGCGUUCUGUAUAAAUUAAAGGCGAUGCUUUCAAGAAUGUUUUGAGUAUGGGUCUUGGCAAGUCCCCGGUAUCGACAUCGUCCGCCAUGAAACCACCGCCGAAUACUGCCAAAGGUGCGUUCGAUGGUGCUCCGUAUCGGACCGAUUGCUUUGUUUCCUUGCUUCUCUUCCUCGGUCAAUGCCCUGUUGCGUUGUGCCUUGUGCAUGAUGCCGUCUUGAAGGUGAUGGGUUUGCAGGUAGGAACGAUUUUCCCCGCAAGCAUAUCCUUUGUCCGCGAAGACGGCUGUGCCUUGAGGUAUGUUUGCACCCUGCAAUAGCGGAAUAAACUCCUUCGUGUCACUGCGAUUCGCUGCUGUCGUUAUCACCUUUUGAACAAUGCCUUGAACAUUGGUCAGACAAUGCUUUUUGUAUCCGUAGUGAUAACGCUUUUGUUUGUAAACCCAACGGGCUUCUUCAUCCGUCCCUUUACGCUGACGGACAACCUGUUUUUGAUAAUCCUCCUCUGCCUCUUUUUCCUCCUCGCUCCGAUUGUCUUCUCUGUCGUCUGCGACUUCAAUCGUAAUGCUUCCGUUGGGUUUAUGCGGCGUCUCCACAAGGCUUGCAUCGACAAGCACCCCUUCCCUGACCGAAAUGUGAUGGCGGGAAAGUUGUUUGUUAAACUGCGCCAAUAGUUUGUCCAUGAGCCCCAACUCUGUCAGUGCCGAACGAAAUCGACUGAUGGUGCUGUGGUCGGGAGAUACCUCUUCCAUAGCCCCAAGAAUCGGGAAAAGGUGAUUGAAUCAUUGAUGCGCUCCUCCAAAGCACAAUCACUGAGGUUGUACCAUGUCUCCAAAAGCAACAUCUUGAAUAAGAGAAUCACGUCAUAAGCCGGGGCGCCGAUGGCAUUUUGUCGCUUGGUGUAUUUCUUGUUGAUCAGCGUCCUGAUCGGACGCCAAUCGAUAAGCCUCUCAACCUGAUUGAGGAAGUCGUUUUGUGCUUUGCGAUAACGCUUUGAAAGGAGUGCGUCUGCAAAUGUUACAUGCUCAUCGGUAUUCUUGGAUUGGUAUGCCAUGGGAGGAAUAUUAUGCUGUUUUUAAUACUCAAAUAUACAAAAUAACUCCCUAUUAUACAAUGAAUUAACAAACAAAAUACACACUAAUUGCCGUGCAAAGGUCUCCUUAAAGAGACCACGGUUUCUUUUCGGACAUAAAAAAGAAGGCGAUCCAGAACAUCUGUUCUAGCUCGCCCUCUCUAUUAAAGUUAUUUAUAUCCGAUGCAGCGAC .....((((........(..((((.....((........)).(((((((((..((((......)))).))))))))).....))))..)..............((.(((((((....(((((.....))))).((((((((..((((((((.((((((((............(((..(((((......)))))..)))...((((((..(((((..(((((((..(((((((((..((((((((((...(((((((((((((((((.(......))))))))))))))))))((((((((((((...)))))))).))))....(((..((((................((((((((.(((((((...)))))))...(((.((.....)).))).......).))))))))))).......(((((.((((..(.(((...))))..)))).))))).........))).))))))))))..)))))))))...........(((.((((......((((..(((.....)))..)))).((((((..(((((((.(.(((((((..((((.....))))..((((((((((((((((....)))))..(((...)))....)))))))))))..)))))))....(((......)))..).)))))))..((..((((((.(.(((((((((..(((((.(((((.......))))).)))))..((((.....)))).....))))))))))........((((((((((((((........((((((..........))))))...........................................((..((((((........((((....))))..))))))....)).))))))))))))))))))))..))..))))))..)))).)))...))))))))))))..))....((((.(((((....((((........)))).)))))...(((((((((((((((((......((((((..(((......)))))))))((.(((((((...((((....)))).))))))).)).......))).....(((((.........(((((((((((.((((((((((((.....))))))....((((....((((((.((...(((....((((..................(((((((((((.....)))).)))))))....(((((((((..((((((.....))))))..)))))))))..))))..(((.....)))...)))...))))))))..))))..))))))..))))))))))).......)))))..)))))).)).(((((((...(((....))).(((((...((((.((.(((.(((.......))).))))).)))).))))).......))).))))..))))))......)))).......)))).)))))))).((..((((((((....))))))))..)).)))))))).((.(((((.(.(((((....))))).).))))).)).))))))))........))))))).)).)))). (-515.48) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GUCGCUGCAUCGGAUAUAAAUAACUUUAAUAGAGAGGGCGAGCUAGAACAGAUGUUCUGGAUCGCCUUCUUUUUUAUGUCCGAAAAGAAACCGUGGUCUCUUUAAGGAGACCUUUGCACGGCAAUUAGUGUGUAUUUUGUUUGUUAAUUCAUUGUAUAAUAGGGAGUUAUUUUGUAUAUUUGAGUAUUAAAAACAGCAUAAUAUUCCUCCCAUGGCAUACCAAUCCAAGAAUACCGAUGAGCAUGUAACAUUUGCAGACGCACUCCUUUCAAAGCGUUAUCGCAAAGCACAAAACGACUUCCUCAAUCAGGUUGAGAGGCUUAUCGAUUGGCGUCCGAUCAGGACGCUGAUCAACAAGAAAUACACCAAGCGACAAAAUGCCAUCGGCGCCCCGGCUUAUGACGUGAUUCUCUUAUUCAAGAUGUUGCUUUUGGAGACAUGGUACAACCUCAGUGAUUGUGCUUUGGAGGAGCGCAUCAAUGAUUCAAUCACCUUUUCCCGAUUCUUGGGGCUAUGGAAGAGGUAUCUCCCGACCACAGCACCAUCAGUCGAUUUCGUUCGGCACUGACAGAGUUGGGGCUCAUGGACAAACUAUUGGCGCAGUUUAACAAACAACUUUCCCGCCAUCACAUUUCGGUCAGGGAAGGGGUGCUUGUCGAUGCAAGCCUUGUGGAGACGCCGCAUAAACCCAACGGAAGCAUUACGAUUGAAGUCGCAGACGACAGAGAAGACAAUCGGAGCGAGGAGGAAAAAGAGGCAGAGGAGGAUUAUCAAAAACAGGUUGUCCGUCAGCGUAAAGGGACGGAUGAAGAAGCCCGUUGGGUUUACAAACAAAAGCGUUAUCACUACGGAUACAAAAAGCAUUGUCUGACCAAUGUUCAAGGCAUUGUUCAAAAGGUGAUAACGACAGCAGCGAAUCGCAGUGACACGAAGGAGUUUAUUCCGCUAUUGCAGGGUGCAAACAUACCUCAAGGCACAGCCGUCUUCGCGGACAAAGGAUAUGCUUGCGGGGAAAAUCGUUCCUACCUGCAAACCCAUCACCUUCAAGACGGCAUCAUGCACAAGGCACAACGCAACAGGGCAUUGACCGAGGAAGAGAAGCAAGGAAACAAAGCAAUCGGUCCGAUACGGAGCACCAUCGAACGCACCUUUGGCAGUAUUCGGCGGUGGUUUCAUGGCGGACGAUGUCGAUACCGGGGACUUGCCAAGACCCAUACUCAAAACAUUCUUGAAAGCAUCGCCUUUAAUUUAUACAGAACGCCGGGGAUAAUUAUGUCCUCAUCCGUAGGAUAAGGCAUAACCCCCCUUGAGGAGCUCGUGCAAGUAGCUCCUCAAGGGGGAUUUACAACUACUUUCACUCCUUACUGCCACCCCUUUUCCCUCCCCCCGUUUUAUGUGAAGAAUUCCUCUUCCCUCCAUUUCCUUAUUUUUCAAAGGUCUCAUAAAAACGCUAUCAAAUUAGGAUUAUGUCCUAUUUCUAUCCGAAACUAUAAGGCUCUAUUGGACCUUGGUCGAAGAAUCAAAUUCGAACUAACGAAAACUAACUCUCUGCGGAAUUUGGCUUUUUAAGGCUCUGCUGUAUGCGAAGAAA ((((.(((.(((((((((((..........(((((((((((.(((((((....))))))).)))))))))))))))))))))).......(((((((((((....)))))))..(((((((((....((.((((...((((......((((((((((....(((((.((((.(((...(((........)))...))).))))...))))).(((....)))........))).))))))).....))))..)))).))(((((((((((...(((((.((.((((((((((..((((((........)))))).((((......(((..((((((.....))))))..)))............(((.(((((((..(((.(((.(((......))).))).))).....((((....)))))))))))..((....)).)))....)))).....))))))))))))..))))).....(((((......((...(((((((((((((.(((.(((..(.((.....)))..))).))).)))...(((((......)))))......)))))))))).....)).........(((((.((((........))))....))))).........))))).))))))))))).))))).)))).((...(((....))).)).........))))..)))...)))).....(((((.(((.(((((.((((.....(((.((.(((((((..((((..((((((((...((((((((.(((((((((((..(.....).)))))))......((((((((.(((............((((((((((.((((((..........))))))..((((((.....)))))).......))))))))))..(((.(((...)))...(((.(....).)))......)))..(((...(((((......((....))....((((((((...((......(((..(.(((((((..............))))))).)..))).))...))))))))....)))))...))).))).)))).))))...))))..(((((((..((..(....).........(.((((...)))).)..........)).....((((((((...(((((((.(((((.((((.....))))......(((..((.....)).)))................))))).)))))))....................((((....(((((.(((.((((...)))).)))))))).((((((((((((((((......).))))))))))))))).................)))).))))))))...)))))))........)))))...))).....))))))))))))..))))))).)).)))....))))..((((((.((((......((((((...))))))......((((......(((((..(....)..))))).(((((........)))))......................))))...))))))))))...))))).))).)))))..... (-507.84) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 998 300 251 117 67 NC_002950:PG0938|5end_calcium-transporting_ATPase_1000385..1000615_NEGATIVE 934 1340 1291 51 2 NC_002950:PG1906|5end_ISPg1,_transposase_2005407..2005637_POSITIVE 934 1340 1291 51 2 NC_002950:PG1624|5end_ISPg1,_transposase_1707273..1707503_NEGATIVE 934 1340 1291 51 2 NC_002950:PG1448|5end_ISPg1,_transposase_1532284..1532514_POSITIVE 934 1340 1291 51 2 NC_002950:PG1320|5end_ISPg1,_transposase,_internal_deletion_1398752..1398982_POSITIVE 934 1340 1291 51 2 NC_002950:PG1244|5end_ISPg1,_transposase_1319534..1319764_POSITIVE 934 1340 1291 51 2 NC_002950:PG1197|5end_ISPg1,_transposase_1276560..1276790_NEGATIVE 934 1340 1291 51 2 NC_002950:PG1177|5end_ISPg1,_transposase_1258879..1259109_NEGATIVE 934 1340 1291 51 2 NC_002950:PG1031|5end_ISPg1,_transposase_1094166..1094396_NEGATIVE 934 1340 1291 51 2 NC_002950:PG0825|5end_ISPg1,_transposase_883148..883378_NEGATIVE 934 1340 1291 51 2 NC_002950:PG0549|5end_ISPg1,_transposase_607072..607302_NEGATIVE 934 1340 1291 51 2 NC_002950:PG0460|5end_ISPg1,_transposase_501937..502167_POSITIVE 934 1340 1291 51 2 NC_002950:PG0184|5end_ISPg1,_transposase_216402..216632_POSITIVE 911 289 241 231 182 NC_002950:PG1176|5end_ABC_transporter,_ATP-binding_protein,_putative_1257644..1257874_NEGATIVE 793 256 211 231 185 NC_002950:PG0759|5end_TPR_domain_protein_810785..811015_NEGATIVE 535 230 181 226 179 NC_002950:PG2060|5end_thymidylate_synthase_2157573..2157803_POSITIVE 529 430 385 215 157 NC_002950:PG1125|5end_hypothetical_protein_1201727..1201957_NEGATIVE 450 439 395 47 1 NC_002950:PG0362|5end_hypothetical_protein_395301..395531_POSITIVE 436 878 842 153 117 NC_002950:PG0665|5end_beta-galactosidase_711827..712057_POSITIVE 434 1489 1464 230 205 NC_002950:PG1788|5end_cysteine_peptidase,_putative_1875976..1876206_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1045 320 271 112 63 NC_002950:PG1320|3end_ISPg1,_transposase,_internal_deletion_1399467..1399617_POSITIVE 998 300 251 92 42 NC_002950:PG1906|3end_ISPg1,_transposase_2006572..2006722_POSITIVE 998 300 251 92 42 NC_002950:PG1624|3end_ISPg1,_transposase_1706188..1706338_NEGATIVE 998 300 251 92 42 NC_002950:PG1448|3end_ISPg1,_transposase_1533449..1533599_POSITIVE 998 300 251 92 42 NC_002950:PG1197|3end_ISPg1,_transposase_1275475..1275625_NEGATIVE 998 300 251 92 42 NC_002950:PG1177|3end_ISPg1,_transposase_1257794..1257944_NEGATIVE 998 300 251 92 42 NC_002950:PG1031|3end_ISPg1,_transposase_1093081..1093231_NEGATIVE 998 300 251 92 42 NC_002950:PG0825|3end_ISPg1,_transposase_882063..882213_NEGATIVE 998 300 251 92 42 NC_002950:PG0184|3end_ISPg1,_transposase_217567..217717_POSITIVE 993 300 251 92 42 NC_002950:PG1244|3end_ISPg1,_transposase_1320699..1320849_POSITIVE 993 300 251 92 42 NC_002950:PG0549|3end_ISPg1,_transposase_605987..606137_NEGATIVE 993 300 251 92 42 NC_002950:PG0460|3end_ISPg1,_transposase_503102..503252_POSITIVE 713 1485 1441 47 3 NC_002950:PG1351|3end_hypothetical_protein_1432238..1432388_NEGATIVE 645 1440 1394 47 1 NC_002950:PG1229|3end_hypothetical_protein_1305559..1305709_NEGATIVE 472 439 391 147 97 NC_002950:PG0361|3end_hypothetical_protein_395481..395631_POSITIVE 447 938 891 136 99 NC_002950:PG1151|3end_alcohol_dehydrogenase,_iron-containing_1234378..1234528_POSITIVE 439 940 891 144 71 NC_002950:PG0816|3end_hypothetical_protein_876386..876536_NEGATIVE 436 878 842 106 70 NC_002950:PG0664|3end_oxidoreductase,_Gfo/Idh/MocA_family_711860..712010_POSITIVE 431 879 831 82 21 NC_002950:PG1431|3end_DNA-binding_response_regulator,_LuxR_family_1515986..1516136_NEGATIVE 426 439 391 138 99 NC_002950:PG1625|3end_hypothetical_protein_1708718..1708868_POSITIVE