Origin IGS: tttcgacaacatcctttagacgaccacaatagactatgatacaaataaccgatctcagcaaaaaatacaatggggttaccgtactggatattccccatctctccataagccacggcgaaaccttcggtttggtaggcaataacggtgccggcaagactaccctcttccgcctcgtcctcgatctgatcaaagcagatagcggtagcatctccatcgacgacatccccgtagcgggtagtgacgattaagggccgtgtcggagccttcctcgacgaaagcttcctcatcggcttcctgcgtccggaggagtatttcgatttcatcggcaagctccaccacctcgacaagcaggagatagagcgttttctcgactacatgtcgcccctctttgccgatgaagttttgggcaagaacaaactcattcgggatttttccaaagggaatcaaaagaagataggcatagccgctgccatgctctctcgccccgatatattgatcctcgacgaaccgttcacggctctcgatccttcctcacaaatacggctgaagaaaatgctcaacgaacatgcaacccaatacggtaccaccatgcttatctccagccacgacctcaaccacgtgaccgaagtcagcagccgcatcgtagtactgcaaaaaggcgagatcatcaaagacctccaaacaaacgaacagaccctatccgaactcgaacaacacttcgccgtcgaaggataaaacgaccagggtaaagcggattcgccccttggggattactccttcaccaccgcctcttggaggaatatccgcaaaccacctcttccgaaacacgtaccgcaaacgctccgattccggtgcgtgtttgccgaacaaagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 cgtcgttttgttggcttcctctacggagtgttgtttatgctaatatagcaattattccacatatctgctacttattttgatgtgtttttccgatctcaatcttgagaaccgtatgcggattcccacagattaaaaatgataaacaactgaaaaacagatagcctgtgggtagacgattttcccggacgaacgctgcacgagagtgtggaatgtgtcaatctcggattcgtttggtttacgcgccaaaattttcctgtttataacgccataaaacatggtgcgagaactttttcgttttggcgtgggaagtaaaaaaattacgagccaaaacgaaaaaaatctcgcgccactttgttcggcaaacacgcaccggaatcggagcgtttgcggtacgtgtttcggaagaggtggtttgcggatattcctccaagaggcggtggtgaaggagtaatccccaaggggcgaatccgctttaccctggtcgttttatccttcgacggcgaagtgttgttcgagttcggatagggtctgttcgtttgtttggaggtctttgatgatctcgcctttttgcagtactacgatgcggctgctgacttcggtcacgtggttgaggtcgtggctggagataagcatggtggtaccgtattgggttgcatgttcgttgagcattttcttcagccgtatttgtgaggaaggatcgagagccgtgaacggttcgtcgaggatcaatatatcggggcgagagagcatggcagcggctatgcctatcttcttttgattccctttggaaaaatcccgaatgagtttgttcttgcccaaaacttcatcggcaaagaggggcgacatgtagtcgagaaaacgctctatctcctgcttgtcgaggtggtggagcttgccgatgaaatcgaaatactcctccggacgcaggaagccgatgaggaagctttcgtcgaggaaggctccgacacggcccttaatcgtcactacccgctacggggatgtcgtcgatggagatgctaccgctatctgctttgatcagatcgaggacgaggcggaagagggtagtcttgccggcaccgttattgcctaccaaaccgaaggtttcgccgtggcttatggagagatggggaatatccagtacggtaaccccattgtattttttgctgagatcggttatttgtatcatagtctattgtggtcgtctaaaggatgttgtcgaaa Mask Tandem Repeat Region ================================================ tttcgacaacatcctttagacgaccacaatagactatgatacaaataaccgatctcagcaaaaaatacaatggggttaccgtactggatattccccatctctccataagccacggcgaaaccttcggtttggtaggcaataacggtgccggcaagactaccctcttccgcctcgtcctcgatctgatcaaagcagatagcggtagcatctccatcgacgacatccccgtagcgggtagtgacgattaagggccgtgtcggagccttcctcgacgaaagcttcctcatcggcttcctgcgtccggaggagtatttcgatttcatcggcaagctccaccacctcgacaagcaggagatagagcgttttctcgactacatgtcgcccctctttgccgatgaagttttgggcaagaacaaactcattcgggatttttccaaagggaatcaaaagaagataggcatagccgctgccatgctctctcgccccgatatattgatcctcgacgaaccgttcacggctctcgatccttcctcacaaatacggctgaagaaaatgctcaacgaacatgcaacccaatacggtaccaccatgcttatctccagccacgacctcaaccacgtgaccgaagtcagcagccgcatcgtagtactgcaaaaaggcgagatcatcaaagacctccaaacaaacgaacagaccctatccgaactcgaacaacacttcgccgtcgaaggataaaacgaccagggtaaagcggattcgccccttggggattactccttcaccaccgcctcttggaggaatatccgcaaaccacctcttccgaaacacgtaccgcaaacgctccgattccggtgcgtgtttgccgaacaaagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Find is-nt database================================================ Query_seq: PG1679:PG1681|PG1679:PG1681:hypothetical protein:glycogen debranching enzyme, archaeal type, putative:->->:1765331..1766551 1221 tttcgacaacatcctttagacgaccacaatagactatgatacaaataaccgatctcagcaaaaaatacaatggggttaccgtactggatattccccatctctccataagccacggcgaaaccttcggtttggtaggcaataacggtgccggcaagactaccctcttccgcctcgtcctcgatctgatcaaagcagatagcggtagcatctccatcgacgacatccccgtagcgggtagtgacgattaagggccgtgtcggagccttcctcgacgaaagcttcctcatcggcttcctgcgtccggaggagtatttcgatttcatcggcaagctccaccacctcgacaagcaggagatagagcgttttctcgactacatgtcgcccctctttgccgatgaagttttgggcaagaacaaactcattcgggatttttccaaagggaatcaaaagaagataggcatagccgctgccatgctctctcgccccgatatattgatcctcgacgaaccgttcacggctctcgatccttcctcacaaatacggctgaagaaaatgctcaacgaacatgcaacccaatacggtaccaccatgcttatctccagccacgacctcaaccacgtgaccgaagtcagcagccgcatcgtagtactgcaaaaaggcgagatcatcaaagacctccaaacaaacgaacagaccctatccgaactcgaacaacacttcgccgtcgaaggataaaacgaccagggtaaagcggattcgccccttggggattactccttcaccaccgcctcttggaggaatatccgcaaaccacctcttccgaaacacgtaccgcaaacgctccgattccggtgcgtgtttgccgaacaaagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG1679:PG1681|PG1679:PG1681:hypothetical protein:glycogen debranching enzyme, archaeal type, putative:->->:1765331..1766551 1221 tttcgacaacatcctttagacgaccacaatagactatgatacaaataaccgatctcagcaaaaaatacaatggggttaccgtactggatattccccatctctccataagccacggcgaaaccttcggtttggtaggcaataacggtgccggcaagactaccctcttccgcctcgtcctcgatctgatcaaagcagatagcggtagcatctccatcgacgacatccccgtagcgggtagtgacgattaagggccgtgtcggagccttcctcgacgaaagcttcctcatcggcttcctgcgtccggaggagtatttcgatttcatcggcaagctccaccacctcgacaagcaggagatagagcgttttctcgactacatgtcgcccctctttgccgatgaagttttgggcaagaacaaactcattcgggatttttccaaagggaatcaaaagaagataggcatagccgctgccatgctctctcgccccgatatattgatcctcgacgaaccgttcacggctctcgatccttcctcacaaatacggctgaagaaaatgctcaacgaacatgcaacccaatacggtaccaccatgcttatctccagccacgacctcaaccacgtgaccgaagtcagcagccgcatcgtagtactgcaaaaaggcgagatcatcaaagacctccaaacaaacgaacagaccctatccgaactcgaacaacacttcgccgtcgaaggataaaacgaccagggtaaagcggattcgccccttggggattactccttcaccaccgcctcttggaggaatatccgcaaaccacctcttccgaaacacgtaccgcaaacgctccgattccggtgcgtgtttgccgaacaaagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Intra-Species Hit: Count: 0 Inter-species Hit: Count: 64 Min: 12 Max: 870 Len: 859 Subject: gi|89098036|ref|ZP_01170922.1| transposase (08)/ABC transporter (ATP-binding protein) [Bacillus sp. NRRL B-14911] HSP 1 e-value: 1.0E-20 bit: 72.0 Len: 426 Query Start:244 Query End:669 Subject Strand: null Subject Start: 72 Subject End: 212 ................................................................................................................................................................................................................................................... I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................... L R N I L G V V P Q E I A L Y N E L T A R E N L E F F G R I H R L P K Q R L K Q K T E E V L E M I G L E D R E K D - L V K T F S G G M K R R L N I G A A L L H E P E L V I M D E P T V G I D P Q S R N Y I L D T V K R L N R E K N M T V L Y T S H Y M E E V E Y L C D R I Y I M D H G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-20 bit: 46.2 Len: 180 Query Start:36 Query End:215 Subject Strand: null Subject Start: 1 Subject End: 60 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................... M L E A V E L I K K F K N K T A V N G V N L Y L E K G E T V G L L G P N G A G K S T T I S M I S S L T S P T S G D V R V .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q2B957 Cluster: Transposase (08)/ABC transporter; n=1; Bacillus sp. NRRL B-14911|Rep: Transposase (08)/ABC transporter - Bacillus sp. NRRL B-14911 HSP 1 e-value: 1.0E-20 bit: 72.0 Len: 426 Query Start:244 Query End:669 Subject Strand: null Subject Start: 72 Subject End: 212 ................................................................................................................................................................................................................................................... I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................... L R N I L G V V P Q E I A L Y N E L T A R E N L E F F G R I H R L P K Q R L K Q K T E E V L E M I G L E D R E K D - L V K T F S G G M K R R L N I G A A L L H E P E L V I M D E P T V G I D P Q S R N Y I L D T V K R L N R E K N M T V L Y T S H Y M E E V E Y L C D R I Y I M D H G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-20 bit: 46.2 Len: 180 Query Start:36 Query End:215 Subject Strand: null Subject Start: 1 Subject End: 60 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................... M L E A V E L I K K F K N K T A V N G V N L Y L E K G E T V G L L G P N G A G K S T T I S M I S S L T S P T S G D V R V .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89109964|ref|AP_003744.1| predicted transporter subunit [Escherichia coli W3110] HSP 1 e-value: 1.0E-19 bit: 57.8 Len: 267 Query Start:51 Query End:317 Subject Strand: null Subject Start: 8 Subject End: 91 .................................................. D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A G S D D * G P C R S L P R R K L P H R L P A S G G V F R ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .................................................. N L A K A Y K G R R V V E D V S L T V N S G E I V G L L G P N G A G K T T T F Y M V V G I V P R D A G N I I I D D D D I S L L - - - - P L H A R A R R G I G Y - L P Q E A S I F R ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-19 bit: 57.0 Len: 261 Query Start:409 Query End:669 Subject Strand: null Subject Start: 131 Subject End: 216 ........................................................................................................................................................................................................................................................................................................................................................................................................................ K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................................................................................................................................................................................................ R D S M G Q S L S G G E R R R V E I A R A L A A N P K F I L L D E P F A G V D P I S V I D I K R I I - E H L R D S G L G V L I T D H N V R E T L A V C E R A Y I V S Q G H L I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|15613617|ref|NP_241920.1| transposase (08)/ABC transporter (ATP-binding protein) [Bacillus halodurans C-125] HSP 1 e-value: 4.0E-19 bit: 64.3 Len: 426 Query Start:244 Query End:669 Subject Strand: null Subject Start: 663 Subject End: 803 ................................................................................................................................................................................................................................................... I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................... I R S I L G V V P Q E I A V Y H D L T A R E N L A F F G K I Y G L K G E E L K H R M E S T L Q L V G L E E R - Q N D R V H T F S G G M K R R L N I A V A L L H E P E L I I M D E P T V G I D P Q S R S H I L E T V K T L N Q E R E M T V I Y T S H Y M E E V E Y L C D R L Y I M D R G E V I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-19 bit: 48.9 Len: 180 Query Start:36 Query End:215 Subject Strand: null Subject Start: 592 Subject End: 651 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................... M I E V I D L S K T Y R N R Q V V K G I N M F I E K G E M V G L L G P N G A G K S T T I S M I S S L I Q P T S G D V L I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: UniRef90_Q9KE04 Cluster: Transposase (08)/ABC transporter; n=7; Bacillus halodurans|Rep: Transposase (08)/ABC transporter - Bacillus halodurans HSP 1 e-value: 4.0E-19 bit: 64.3 Len: 426 Query Start:244 Query End:669 Subject Strand: null Subject Start: 663 Subject End: 803 ................................................................................................................................................................................................................................................... I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................... I R S I L G V V P Q E I A V Y H D L T A R E N L A F F G K I Y G L K G E E L K H R M E S T L Q L V G L E E R - Q N D R V H T F S G G M K R R L N I A V A L L H E P E L I I M D E P T V G I D P Q S R S H I L E T V K T L N Q E R E M T V I Y T S H Y M E E V E Y L C D R L Y I M D R G E V I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-19 bit: 48.9 Len: 180 Query Start:36 Query End:215 Subject Strand: null Subject Start: 592 Subject End: 651 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................... M I E V I D L S K T Y R N R Q V V K G I N M F I E K G E M V G L L G P N G A G K S T T I S M I S S L I Q P T S G D V L I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: IS|IS660.aa1 HSP 1 e-value: 4.0E-19 bit: 64.3 Len: 426 Query Start:244 Query End:669 Subject Strand: null Subject Start: 663 Subject End: 803 ................................................................................................................................................................................................................................................... I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................... I R S I L G V V P Q E I A V Y H D L T A R E N L A F F G K I Y G L K G E E L K H R M E S T L Q L V G L E E R - Q N D R V H T F S G G M K R R L N I A V A L L H E P E L I I M D E P T V G I D P Q S R S H I L E T V K T L N Q E R E M T V I Y T S H Y M E E V E Y L C D R L Y I M D R G E V I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-19 bit: 48.9 Len: 180 Query Start:36 Query End:215 Subject Strand: null Subject Start: 592 Subject End: 651 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................... M I E V I D L S K T Y R N R Q V V K G I N M F I E K G E M V G L L G P N G A G K S T T I S M I S S L I Q P T S G D V L I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89107706|ref|AP_001486.1| putrescine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 1.0E-15 bit: 53.1 Len: 369 Query Start:304 Query End:672 Subject Strand: null Subject Start: 109 Subject End: 230 ............................................................................................................................................................................................................................................................................................................... E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................... E Q N I A F G L K Q D K L P K A E I A S R V N E M L G L V H M Q E F A K R K P - H Q L S G G Q R Q R V A L A R S L A K R P K L L L L D E P M G A L D K K L R D R M Q L E V V D I L E R V G V T C V M V T H D Q E E A M T M A G R I A I M N R G K F V Q ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-15 bit: 48.5 Len: 198 Query Start:36 Query End:233 Subject Strand: null Subject Start: 19 Subject End: 84 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................... L L E I R N L T K S Y D G Q H A V D D V S L T I Y K G E I F A L L G A S G C G K S T L L R M L A G F E Q P S A G Q I M L D G V D L S ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89110526|ref|AP_004306.1| fused ribosome-associated ATPases [Escherichia coli W3110] HSP 1 e-value: 4.0E-14 bit: 52.0 Len: 432 Query Start:238 Query End:669 Subject Strand: null Subject Start: 345 Subject End: 486 ............................................................................................................................................................................................................................................. V T I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ............................................................................................................................................................................................................................................. I D T R R R V G Y M S Q A F S L Y N E L T V R Q N L E L H A R L F H I P E A E I P A R V A E M S E R F K L N D V - E D I L P E S L P L G I R Q R L S L A V A V I H R P E M L I L D E P T S G V D P V A R D M F W Q L M V D L S R Q D K V T I F I S T H F M N E - A E R C D R I S L M H A G K V L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 4.0E-14 bit: 44.3 Len: 204 Query Start:39 Query End:242 Subject Strand: null Subject Start: 277 Subject End: 344 ...................................... I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A G S D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................... I E A R D L T M R F G S F V A V D H V N F R I P R G E I F G F L G S N G C G K S T T M K M L T G L L P A S E G E A W L F G Q P V D P K D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-7 bit: 45.4 Len: 399 Query Start:307 Query End:705 Subject Strand: null Subject Start: 108 Subject End: 246 .................................................................................................................................................................................................................................................................................................................. E Y F D F I G K L H H L D K Q E I E - R F L D Y M S P L - - - - F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D - - - - - - - L Q T N E Q T L S E .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................. E N V D F F A R L F G H D K A E R E V R I N E L L T S T G L A P F R D R P A G K - - - - - - L S G G M K Q K L G L C C A L I H D P E L L I L D E P T T G V D P L S R S Q F W D L I D S I R Q R Q S N M S V L V A T A Y M E E A E R F D W L V A M N A G E V L A T G S A E E L R Q Q T Q S A T L E E .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 2.0E-7 bit: 28.1 Len: 174 Query Start:42 Query End:215 Subject Strand: null Subject Start: 14 Subject End: 71 ......................................... Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ......................................... Q L A G V S Q H Y G K T V A L N N I T L D I P A R C M V G L I G P D G V G K S S L L S L I S G A R V I E Q G N V M V .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89107645|ref|AP_001425.1| fused predicted transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 1.0E-13 bit: 50.1 Len: 180 Query Start:24 Query End:203 Subject Strand: null Subject Start: 325 Subject End: 384 ....................... P Q * T M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................... P G E T V I E A K E L T K K F G D F A A T D H V N F A V K R G E I F G L L G P N G A G K S T T F K M M C G L L V P T S G .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-13 bit: 44.7 Len: 414 Query Start:256 Query End:669 Subject Strand: null Subject Start: 404 Subject End: 538 ............................................................................................................................................................................................................................................................... V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ............................................................................................................................................................................................................................................................... L G Y M A Q K F S L Y G N L T V E Q N L R F F S G V Y G L R G R A Q N E K I S R M S E A F G L K S I A S H A T - D E L P L G F K Q R L A L A C S L M H E P D I L F L D E P T S G V D P L T R R E F W L H I N S - M V E K G V T V M V T T H F M D E - A E Y C D R I G L V Y R G K L I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89107032|ref|AP_000812.1| iron-hydroxamate transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-11 bit: 48.5 Len: 348 Query Start:322 Query End:669 Subject Strand: null Subject Start: 117 Subject End: 227 ................................................................................................................................................................................................................................................................................................................................. I G K L H H L D K Q E I E R F L D Y - - M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................................................................................................. L G R F G A A D R E K V E E A I S L V G L K P L - - - - - - - A H R L V D S L S G G E R Q R A W I A M L V A Q D S R C L L L D E P T S A L D I A H Q V D V L S L V H R L S Q E R G L T V I A V L H D I N M A A R Y C D Y L V A L R G G E M I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-11 bit: 38.9 Len: 279 Query Start:33 Query End:311 Subject Strand: null Subject Start: 10 Subject End: 100 ................................ T M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A G S D D * G P C R S L P R R K L P H R L P A S G G V .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................ T T F A L R N I S F R V P G R T L L H P L S L T F P A G K V T G L I G H N G S G K S T L L K M L G R H Q P P S E G E I L L D A Q P L E S W S S K A F A R K V - - A Y L P Q Q L P P A E G M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89109958|ref|AP_003738.1| predicted toluene transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-11 bit: 50.1 Len: 294 Query Start:376 Query End:669 Subject Strand: null Subject Start: 126 Subject End: 224 ....................................................................................................................................................................................................................................................................................................................................................................................... M S P L F A D E V L G K N K L I - R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ....................................................................................................................................................................................................................................................................................................................................................................................... M M K L E A V G L R G A A K L M P S E L S G G M A R R A A L A R A I A L E P D L I M F D E P F V G Q D P I T M G V L V K L I S E L N S A L G V T C V V V S H D V P E V L S I A D H A W I L A D K K I V ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-11 bit: 37.0 Len: 306 Query Start:36 Query End:341 Subject Strand: null Subject Start: 8 Subject End: 119 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D - - D I P V A G S D D * G P C R S L P R R K L P H R L P A S G G V F - - - - - - - - - - - - - R F H R Q A P P P ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................... L V D M R D V S F T R G N R C I F D N I S L T V P R G K I T A I M G P S G I G K T T L L R L I G G Q I A P D H G E I L F D G E N I P A M S R S - - - - - R L Y T V R K R M S M L F Q S G A L F T D M N V F D N V A Y P L R E H T Q L P A P ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89108326|ref|AP_002106.1| D-Ala-D-Ala transporter subunit [Escherichia coli W3110] HSP 1 e-value: 7.0E-11 bit: 65.5 Len: 459 Query Start:412 Query End:870 Subject Strand: null Subject Start: 137 Subject End: 279 ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L E Q H F A V E G * N D Q G K A D S P L G D Y S F T T A S W R N I R K P P L P K H V P Q T L R F R C V F A E Q ............................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................... D R L P H A F S G G Q R Q R I A I A R A L S S Q P D V I V L D E P T S A L D I S V Q A Q I L N L L V T L Q E N H G L T Y V L I S H N V S V I R H M S D R V A V M Y L G Q I V - E L G D A Q Q V L T A P A H P Y T R L L L D S L P A I D K P L E E - - - - - - E W A - L R K T D L P G N - - R T L P Q G C F F Y E R ............................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110657|ref|AP_004437.1| fused predicted transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 1.0E-10 bit: 43.1 Len: 423 Query Start:292 Query End:714 Subject Strand: null Subject Start: 387 Subject End: 524 ................................................................................................................................................................................................................................................................................................... F L R P E E Y F D F I G K L H H L D K Q E I E R F L - D Y M S P L F - - A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K - - - D L Q T N E Q T L S E L E Q ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................... Y L R A D E - - S P I Q H L A R L A P Q E L E Q K L R D Y L G G F G F Q G D K V T E E T - - - R R F S G G E K A R L V L A L I V W Q R P N L L L L D E P T N H L D - - - - L D M R Q A L T E A L I E F E G A L V V V S H D R H L L R S T T D D L Y L V H D R K V E P F D G D L E D Y Q Q W L S D V Q K ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-10 bit: 41.6 Len: 204 Query Start:12 Query End:215 Subject Strand: null Subject Start: 301 Subject End: 371 ........... S F R R P Q * T - - - M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........... S F R A P E S L P N P L L K M E K V S A G Y G D R I I L D S I K L N L V P G S R I G L L G R N G A G K S T L I K L L A G E L A P V S G E I G L .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 3 e-value: 5.0E-6 bit: 49.3 Len: 333 Query Start:325 Query End:657 Subject Strand: null Subject Start: 115 Subject End: 221 .................................................................................................................................................................................................................................................................................................................................... G K L H H L D K Q E I E - R F L D Y M S P L - F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................... G K L D A I D A W S I R S R A A S L L H G L G F S N E Q L - - E R P V S D F S G G W R M R L N L A Q A L I C R S D L L L L D E P T N H L D L D A V I W L E K W L K - - - - S Y Q G T L I L I S H D R D F L D P I V D K I I H I E Q .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110562|ref|AP_004342.1| glycerol-3-phosphate transporter subunit [Escherichia coli W3110] HSP 1 e-value: 1.0E-10 bit: 46.2 Len: 333 Query Start:328 Query End:660 Subject Strand: null Subject Start: 102 Subject End: 211 ....................................................................................................................................................................................................................................................................................................................................... K L H H L D K Q E I - E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ....................................................................................................................................................................................................................................................................................................................................... K I R G M G K Q Q I A E R V K E A A R I L E L D G L L K R R P - - R E L S G G Q R Q R V A M G R A I V R D P A V F L F D E P L S N L D A K L R V Q M R L E L Q Q L H R R L K T T S L Y V T H D Q V E A M T L A Q R V M V M N G G ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 1.0E-10 bit: 38.1 Len: 183 Query Start:39 Query End:221 Subject Strand: null Subject Start: 4 Subject End: 65 ...................................... I Q I T D L S K K Y N G V T V L D I P - H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ...................................... L K L Q A V T K S W D G K T Q V I K P L T L D V A D G E F I V M V G P S G C G K S T L L R M V A G L E R V T E G D I W I N D ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89108946|ref|AP_002726.1| predicted transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-10 bit: 63.9 Len: 438 Query Start:235 Query End:672 Subject Strand: null Subject Start: 70 Subject End: 215 .......................................................................................................................................................................................................................................... V V T I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................... V L E L R R R M G Y A I Q S I G L F P H W S V A Q N I A T V P Q L Q K W S R A R I D D R I D E L M A L L G L E S N L R E R Y P H Q L S G G Q Q Q R V G V A R A L A A D P Q V L L M D E P F G A L D P V T R G A L Q Q E M T R I H R L L G R T I V L V T H D I D E A L R L A E H L V L M D H G E V V Q ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108549|ref|AP_002329.1| vitamin B12 transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-10 bit: 56.6 Len: 339 Query Start:331 Query End:669 Subject Strand: null Subject Start: 96 Subject End: 212 .......................................................................................................................................................................................................................................................................................................................................... L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S - - - - - - - R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................................................................................................................... L H Q H D K T R T E L L N D V A G A L A L D D K L G R S T - - N Q L S G G E W Q R V R L A A V V L Q I T P Q A N P A G Q L L L L D E P M N S L D V A Q Q S A L D K I L S A - L C Q Q G L A I V M S S H D L N H T L R H A H R A W L L K G G K M L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 2.0E-10 bit: 26.9 Len: 117 Query Start:114 Query End:230 Subject Strand: null Subject Start: 26 Subject End: 63 ................................................................................................................. G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................. G E I L H L V G P N G A G K S T L L A R M A G M - T S G K G S I Q F A G Q P L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89109470|ref|AP_003250.1| glycine betaine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-10 bit: 63.5 Len: 246 Query Start:427 Query End:672 Subject Strand: null Subject Start: 164 Subject End: 245 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................... E L S G G M R Q R V G L A R A L A I N P D I L L M D E A F S A L D P L I R T E M Q D E L V K L Q A K H Q R T I V F I S H D L D E A M R I G D R I A I M Q N G E V V Q ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|32477043|ref|NP_870037.1| ABC-type multidrug transport system, ATPase component [Rhodopirellula baltica SH 1] HSP 1 e-value: 3.0E-10 bit: 63.2 Len: 258 Query Start:412 Query End:669 Subject Strand: null Subject Start: 173 Subject End: 257 ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ........................................................................................................................................................................................................................................................................................................................................................................................................................... N D L V G T F S G G M K R R V N L A C G V L H E P E V L L L D E P T V G V D P Q S R Q R I F A M L A E L N S E - G T S V L L T T H H L D E A E S Q C D R I V I V D H G K V V ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89108092|ref|AP_001872.1| oligopeptide transporter subunit [Escherichia coli W3110] HSP 1 e-value: 7.0E-10 bit: 62.0 Len: 246 Query Start:427 Query End:672 Subject Strand: null Subject Start: 168 Subject End: 249 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................... E F S G G M R Q R V M I A M A L L C R P K L L I A D E P T T A L D V T V Q A Q I M T L L N E L K R E F N T A I I M I T H D L V V V A G I C D K V L V M Y A G R T M E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108093|ref|AP_001873.1| oligopeptide transporter subunit [Escherichia coli W3110] HSP 1 e-value: 7.0E-10 bit: 62.0 Len: 261 Query Start:412 Query End:672 Subject Strand: null Subject Start: 159 Subject End: 245 ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................... N R Y P H E F S G G Q C Q R I G I A R A L I L E P K L I I C D E P V S A L D V S I Q A Q V V N L L Q Q L Q R E M G L S L I F I A H D L A V V K H I S D R V L V M Y L G H A V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108998|ref|AP_002778.1| fused predicted oligopeptide transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 7.0E-10 bit: 62.0 Len: 240 Query Start:433 Query End:672 Subject Strand: null Subject Start: 158 Subject End: 237 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G E R Q R V M I A M A L L T R P E L L I A D E P T T A L D V S V Q A Q I L Q L L R E L Q G E L N M G M L F I T H N L S I V R K L A H R V A V M Q N G R C V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-9 bit: 60.5 Len: 246 Query Start:427 Query End:672 Subject Strand: null Subject Start: 425 Subject End: 506 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................... E F S G G Q R Q R I A I A R A L I L K P S L I I L D E P T S S L D K T V Q A Q I L T L L K S L Q Q K H Q L A Y L F I S H D L H V V R A L C H Q V I I L R Q G E V V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89109027|ref|AP_002807.1| fused predicted multidrug transport subunits and membrane component and ATP-binding component of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 8.0E-10 bit: 43.5 Len: 141 Query Start:96 Query End:236 Subject Strand: null Subject Start: 343 Subject End: 389 ............................................................................................... H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A G ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................... N L T I K R G E L L F L I G G N G S G K S T L A M L L T G L Y Q P Q S G E I L L D G K P V S G ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 8.0E-10 bit: 38.1 Len: 318 Query Start:349 Query End:666 Subject Strand: null Subject Start: 423 Subject End: 527 ............................................................................................................................................................................................................................................................................................................................................................ Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................ Q L V E K W L A Q L K M A H K L E L S N G R I V N L K L S K G Q K K R V A L L L A L A E E R D I I L L D E W A A D Q D P H F R R E F Y Q V L L P L M Q E M G K T I F A I S H D - D H Y F I H A D R L L E M R N G Q L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89107660|ref|AP_001440.1| glutamine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 9.0E-10 bit: 61.6 Len: 249 Query Start:427 Query End:675 Subject Strand: null Subject Start: 136 Subject End: 217 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .......................................................................................................................................................................................................................................................................................................................................................................................................................................... E L S G G Q Q Q R V A I A R A L A V K P K M M L F D E P T S A L D P E L R H E V L K V M Q D L A E E - G M T M V I V T H E I G F A E K V A S R L I F I D K G R I A E D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89110258|ref|AP_004038.1| fused D-ribose transporter subunits and ATP-binding components ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 9.0E-10 bit: 61.6 Len: 402 Query Start:325 Query End:726 Subject Strand: null Subject Start: 364 Subject End: 492 .................................................................................................................................................................................................................................................................................................................................... G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L E Q H F A V ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................... G S L K H A D E Q Q A V S - - D F I R - L F N V K T P S M E Q A I G L L S G G N Q Q K V A I A R G L M T R P K V L I L D E P T R G V D V G A K K E I Y Q L I N Q F K A D - G L S I I L V S S E M P E V L G M S D R I I V M H E G H L S G E F - T R E Q A T Q E V L M A A A V ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89109126|ref|AP_002906.1| histidine/lysine/arginine/ornithine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 1.0E-9 bit: 61.2 Len: 327 Query Start:340 Query End:666 Subject Strand: null Subject Start: 123 Subject End: 230 ................................................................................................................................................................................................................................................................................................................................................... L D K Q E I - E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................... L S K Q E A R E R A V K Y L A K V G I D E - R A Q G K Y P V H L S G G Q Q Q R V S I A R A L A M E P E V L L F D E P T S A L D P E L V G E V L R I M Q Q L A E E - G K T M V V V T H E M G F A R H V S T H V I F L H Q G K I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110557|ref|AP_004337.1| leucine/isoleucine/valine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-9 bit: 60.8 Len: 249 Query Start:412 Query End:660 Subject Strand: null Subject Start: 148 Subject End: 230 ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................................................................................................................................... N R Q A S N L A Y G D Q R R L E I A R C M V T Q P E I L M L D E P A A G L N P K E T K E L D E L I A E L R N H H N T T I L L I E H D M K L V M G I S D R I Y V V N Q G ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89107783|ref|AP_001563.1| alkanesulfonate transporter subunit [Escherichia coli W3110] HSP 1 e-value: 4.0E-9 bit: 59.7 Len: 246 Query Start:433 Query End:678 Subject Strand: null Subject Start: 134 Subject End: 215 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q K Q R V A L A R A L I H R P G L L L L D E P L G A L D A L T R L E M Q D L I V S L W Q E H G F T V L L V T H D V S E A V A M A D R V L L I E E G K I G L D L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89109236|ref|AP_003016.1| sulfate/thiosulfate transporter subunit [Escherichia coli W3110] HSP 1 e-value: 6.0E-9 bit: 58.9 Len: 297 Query Start:433 Query End:729 Subject Strand: null Subject Start: 138 Subject End: 235 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L E Q H F A V E ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q K Q R V A L A R A L A V E P Q I L L L D E P F G A L D A Q V R K E L R R W L R Q L H E E L K F T S V F V T H D Q E E A T E V A D R V V V M S Q G N - I E Q A D A P D Q V W R E P A T R F V L E ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89107080|ref|AP_000860.1| DL-methionine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 1.0E-8 bit: 57.8 Len: 291 Query Start:427 Query End:717 Subject Strand: null Subject Start: 140 Subject End: 231 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L E Q H ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................................................................................................................................................................................................................... N L S G G Q K Q R V A I A R A L A S N P K V L L C D E A T S A L D P A T T R S I L E L L K D I N R R L G L T I L L I T H E M D V V K R I C D C V A V I S N G E L I E - - - - - Q D T V S E V F S H ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89107521|ref|AP_001301.1| glutamate and aspartate transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-8 bit: 57.4 Len: 264 Query Start:412 Query End:675 Subject Strand: null Subject Start: 131 Subject End: 217 ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K F P A Q L S G G Q Q Q R V A I A R A L C M D P I A M L F D E P T S A L D P E M I N E V L D V M V E L A N E - G M T M M V V T H E M G F A R K V A N R V I F M D E G K I V E D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89106950|ref|AP_000730.1| thiamin transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-8 bit: 57.0 Len: 276 Query Start:415 Query End:690 Subject Strand: null Subject Start: 125 Subject End: 216 .............................................................................................................................................................................................................................................................................................................................................................................................................................. K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .............................................................................................................................................................................................................................................................................................................................................................................................................................. R L P G E L S G G Q R Q R V A L A R C L V R E Q P I L L L D E P F S A L D P A L R Q E M L T L V S T S C Q Q Q K M T L L M V S H S V E D A A R I A T R S V V V A D G R I A W Q G M T N E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89107680|ref|AP_001460.1| fused predicted peptide transport subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 2.0E-8 bit: 57.0 Len: 321 Query Start:352 Query End:672 Subject Strand: null Subject Start: 134 Subject End: 238 ............................................................................................................................................................................................................................................................................................................................................................... E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................... E A K R M L D Q V R I P E A Q T I L S R Y P - - H Q L S G G M R Q R V M I A M A L S C R P A V L I A D E P T T A L D V T I Q A Q I L Q L I K V L Q K E M S M G V I F I T H D M G V V A E I A D R V L V M Y Q G E A V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-7 bit: 53.1 Len: 246 Query Start:427 Query End:672 Subject Strand: null Subject Start: 452 Subject End: 533 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................... E F S G G Q R Q R I C I A R A L A L N P K V I I A D E A V S A L D V S I R G Q I I N L L L D L Q R D F G I A Y L F I S H D M A V V E R I S H R V A V M Y L G Q I V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108327|ref|AP_002107.1| D-Ala-D-Ala transporter subunit [Escherichia coli W3110] HSP 1 e-value: 3.0E-8 bit: 56.6 Len: 246 Query Start:427 Query End:672 Subject Strand: null Subject Start: 156 Subject End: 237 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................... E L S G G M R Q R V M I A L A F S C E P Q L I I A D E P T T A L D V T V Q L Q V L R L L K H K A R A S G T A V L F I S H D M A V V S Q L C D S V Y V M Y A G S V I E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89107135|ref|AP_000915.1| predicted ferric transporter subunit [Escherichia coli W3110] HSP 1 e-value: 4.0E-8 bit: 56.2 Len: 264 Query Start:409 Query End:672 Subject Strand: null Subject Start: 130 Subject End: 217 ........................................................................................................................................................................................................................................................................................................................................................................................................................ K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................ E D R F V D Q I S G G Q Q Q R V A L A R A L I L K P K V L L F D E P L S N L D A N L R R S M R D K I R E L Q K Q F D I T S L Y V T H D Q S E A F A V S D T V L V M N K G H I M Q ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 8.0E-6 bit: 48.5 Len: 192 Query Start:27 Query End:218 Subject Strand: null Subject Start: 3 Subject End: 66 .......................... Q * T M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................... Q K N F V E L R N V T K R F G S N T V I D N I N L T I P Q G Q M V T L L G P S G C G K T T I L R L V A G L E K P S E G Q I F I D ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89107616|ref|AP_001396.1| molybdate transporter subunit [Escherichia coli W3110] HSP 1 e-value: 5.0E-8 bit: 55.8 Len: 420 Query Start:247 Query End:666 Subject Strand: null Subject Start: 75 Subject End: 207 ...................................................................................................................................................................................................................................................... K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H - L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................... K R R V G Y V F Q D A R L F - - - - - - P H Y K V R G N L R Y G M S K S M V D Q F D K L V A L L G I E P L L - - D R L P G S L S G G E K Q R V A I G R A L L T A P E L L L L D E P L A S L D I P R K R E L L P Y L Q R L T R E I N I P M L Y V S H S L D E I L H L A D R V M V L E N G Q V ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108137|ref|AP_001917.1| predicted antimicrobial peptide transporter subunit [Escherichia coli W3110] HSP 1 e-value: 5.0E-8 bit: 55.8 Len: 264 Query Start:427 Query End:690 Subject Strand: null Subject Start: 158 Subject End: 245 .......................................................................................................................................................................................................................................................................................................................................................................................................................................... D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................... E L T E G E C Q K V M I A I A L A N Q P R L L I A D E P T N S M E P T T Q A Q I F R L L T R L N Q N S N T T I L L I S H D L Q M L S Q W A D K I N V L Y C G Q T V E T A P S K E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110031|ref|AP_003811.1| predicted amino-acid transporter subunit [Escherichia coli W3110] HSP 1 e-value: 5.0E-8 bit: 55.8 Len: 279 Query Start:412 Query End:690 Subject Strand: null Subject Start: 142 Subject End: 233 ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E - - H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................... H K F P G Q I S G G Q Q Q R V A I A R S L C M K P K I M L F D E P T S A L D P E - - - M V K E V L D T M I G L A Q S G M T M L C V T H E M G F A R T V A D R V I F M D R G E I V E Q A A P D E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110809|ref|AP_004589.1| fused D-allose transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 5.0E-8 bit: 55.8 Len: 417 Query Start:295 Query End:711 Subject Strand: null Subject Start: 368 Subject End: 501 ...................................................................................................................................................................................................................................................................................................... L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L E .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................................................................................................................................................................................................................................................................................................... L K D G G Y K G A M G L F H E V D E Q - - - R T A E N Q R E L L A L K C H S V N Q N I T E L S G G N Q Q K V L I S K W L C C C P E V I I F D E P T R G I D V G A K A E I Y K V M R Q L A D D - G K V I L M V S S E L P E I I T V C D R I A V F C E G R L T Q I L - T N R D D M S E E E .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89107237|ref|AP_001017.1| taurine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 9.0E-8 bit: 55.1 Len: 252 Query Start:409 Query End:660 Subject Strand: null Subject Start: 122 Subject End: 205 ........................................................................................................................................................................................................................................................................................................................................................................................................................ K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ........................................................................................................................................................................................................................................................................................................................................................................................................................ E K R Y I W Q L S G G Q R Q R V G I A R A L A A N P Q L L L L D E P F G A L D A F T R D Q M Q T L L L K L W Q E T G K Q V L L I T H D I E E A V F M A T E L V L L S S G ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89107455|ref|AP_001235.1| iron-enterobactin transporter subunit [Escherichia coli W3110] HSP 1 e-value: 9.0E-8 bit: 55.1 Len: 276 Query Start:433 Query End:708 Subject Strand: null Subject Start: 145 Subject End: 236 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q R Q R A W I A M V L A Q E T A I M L L D E P T T W L D I S H Q I D L L E L L S E L N R E K G Y T L A A V L H D L N Q A C R Y A S H L I A L R E G K I V A Q G A P K E I V T A E L ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89110282|ref|AP_004062.1| phosphate transporter subunit [Escherichia coli W3110] HSP 1 e-value: 9.0E-8 bit: 55.1 Len: 258 Query Start:433 Query End:690 Subject Strand: null Subject Start: 155 Subject End: 238 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q Q Q R L C I A R G I A I R P E V L L L D E P C S A L D P I S T G R I E E L I T E L K Q D Y - - T V V I V T H N M Q Q A A R C S D H T A F M Y L G E L I E F S N T D D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110472|ref|AP_004252.1| dipeptide transporter [Escherichia coli W3110] HSP 1 e-value: 9.0E-8 bit: 55.1 Len: 240 Query Start:433 Query End:672 Subject Strand: null Subject Start: 155 Subject End: 234 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G M S Q R V M I A M A I A C R P K L L I A D E P T T A L D V T I Q A Q I I E L L L E L Q Q K E N M A L V L I T H D L A L V A E A A H K I I V M Y A G Q V V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89107715|ref|AP_001495.1| arginine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 1.0E-7 bit: 54.7 Len: 240 Query Start:433 Query End:672 Subject Strand: null Subject Start: 143 Subject End: 221 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q Q Q R V A I A R A L M M E P Q V L L F D E P T A A L D P E I T A Q I V S I I R E L A - E T N I T Q V I V T H E V E V A R K T A S R V V Y M E N G H I V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108752|ref|AP_002532.1| predicted transporter subunit [Escherichia coli W3110] HSP 1 e-value: 1.0E-7 bit: 54.7 Len: 249 Query Start:424 Query End:672 Subject Strand: null Subject Start: 143 Subject End: 224 ....................................................................................................................................................................................................................................................................................................................................................................................................................................... R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................................................................... R R L S G G Q Q Q R V A I A R A L A M R P E V I L F D E P T S A L D P E L V G E V L N T I R Q L A - Q E K R T M V I V T H E M S F A R D V A D R A I F M D Q G R I V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-6 bit: 51.6 Len: 249 Query Start:39 Query End:287 Subject Strand: null Subject Start: 4 Subject End: 86 ...................................... I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A G S D D * G P C R S L P R R K L P H ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................... I E V K N L V K K F H G Q T V L H G I D L E V K P G E V V A I I G P S G S G K T T L L R S I N L L E Q P E A G T I T V G D I T I D T A R S L S Q Q K S L I R Q L R Q H ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108354|ref|AP_002134.1| fused AI2 transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 2.0E-7 bit: 54.3 Len: 243 Query Start:424 Query End:666 Subject Strand: null Subject Start: 402 Subject End: 481 ....................................................................................................................................................................................................................................................................................................................................................................................................................................... R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................................................................... R T L S G G N Q Q K I L I A K C L E A S P Q V L I V D E P T R G V D V S A R N D I Y Q L L R S I A A Q N V A V L L I S S - D L E E I E L M A D R V Y V M H Q G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-6 bit: 49.7 Len: 159 Query Start:60 Query End:218 Subject Strand: null Subject Start: 19 Subject End: 71 ........................................................... K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................... K Q Y S G V N V L K G I D F T L H Q G E V H A L L G G N G A G K S T L M K I I A G I T P A D S G T L E I E ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110445|ref|AP_004225.1| fused subunits of D-xylose transporter and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 2.0E-7 bit: 54.3 Len: 276 Query Start:433 Query End:708 Subject Strand: null Subject Start: 407 Subject End: 497 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G N Q Q K A I L A R C L L L N P R I L I L D E P T R G I D I G A K Y E I Y K L I N Q - L V Q Q G I A V I V I S S E L P E V L G L S D R V L V M H E G K L K A N L I N H N L T Q E Q V ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89107972|ref|AP_001752.1| polyamine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-7 bit: 53.9 Len: 243 Query Start:433 Query End:675 Subject Strand: null Subject Start: 149 Subject End: 229 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q Q Q R V A I A R A V V N K P R L L L L D E S L S A L D Y K L R K Q M Q N E L K A L Q R K L G I T F V F V T H D Q E E A L T M S D R I V V M R D G R I E Q D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89110473|ref|AP_004253.1| dipeptide transporter [Escherichia coli W3110] HSP 1 e-value: 2.0E-7 bit: 53.9 Len: 243 Query Start:430 Query End:672 Subject Strand: null Subject Start: 162 Subject End: 242 ............................................................................................................................................................................................................................................................................................................................................................................................................................................. F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................. F S G G Q R Q R I A I A R G L M L D P D V V I A D E P V S A L D V S V R A Q V L N L M M D L Q Q E L G L S Y V F I S H D L S V V E H I A D E V M V M Y L G R C V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108966|ref|AP_002746.1| fused methyl-galactoside transporter subunitsl and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 3.0E-7 bit: 53.5 Len: 447 Query Start:262 Query End:708 Subject Strand: null Subject Start: 354 Subject End: 498 ..................................................................................................................................................................................................................................................................... A F L D E S F - - L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ..................................................................................................................................................................................................................................................................... A Y L D I G F N S L I S N I R - - - - - N Y K N K V G L L D N S R M K S D T Q W V I D S M R V K T P G H R T Q I G S L S G G N Q Q K V I I G R W L L T Q P E I L M L D E P T R G I D V G A K F E I Y Q L I A E L A K K - G K G I I I I S S E M P E L L G I T D R I L V M S N G L V S G I V D T K T T T Q N E I ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89110549|ref|AP_004329.1| predicted transporter subunit [Escherichia coli W3110] HSP 1 e-value: 6.0E-7 bit: 52.4 Len: 234 Query Start:433 Query End:666 Subject Strand: null Subject Start: 139 Subject End: 215 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G E Q Q R V G I A R A V V N K P A V L L A D E P T G N L D D A L S E G I L R L F E E F - N R V G V T V L M A T H D I N L I S R R S Y R M L T L S D G H L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110819|ref|AP_004599.1| carbon-phosphorus lyase complex subunit [Escherichia coli W3110] HSP 1 e-value: 6.0E-7 bit: 52.4 Len: 243 Query Start:430 Query End:672 Subject Strand: null Subject Start: 146 Subject End: 226 ............................................................................................................................................................................................................................................................................................................................................................................................................................................. F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................. F S G G M Q Q R L Q I A R N L V T H P K L V F M D E P T G G L D V S V Q A R L L D L L R G L V V E L N L A V V I V T H D L G V A R L L A D R L L V M K Q G Q V V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|15927734|ref|NP_375267.1| hypothetical protein SA1958 [Staphylococcus aureus subsp. aureus N315] HSP 1 e-value: 7.0E-7 bit: 52.0 Len: 312 Query Start:433 Query End:744 Subject Strand: null Subject Start: 144 Subject End: 253 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T - T M L I S S H D L N H V T E V S S R I V V L Q K G E - - - - - I I K D L Q T N E Q T L S E L E Q H F A V E G * N D Q ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S T G E K Q R V M I A R A L M G Q P Q V L I L D E P A A G L D F I A R E S L L N I L D S L S D S Y P T L A M I Y V T H F I E E I T G N F T K I L L L K D G E S V Q Q G L I D D I L T S E N M S R F F Q K N V A V Q R W N N R ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89110532|ref|AP_004312.1| nickel transporter subunit [Escherichia coli W3110] HSP 1 e-value: 7.0E-7 bit: 52.0 Len: 300 Query Start:394 Query End:693 Subject Strand: null Subject Start: 142 Subject End: 239 ......................................................................................................................................................................................................................................................................................................................................................................................................... D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ......................................................................................................................................................................................................................................................................................................................................................................................................... D S V L D K R P - - P Q L S G G Q L Q R V C L A R A L A V E P K L L I L D E A V S N L D L V L Q A G V I R L L K K L Q Q Q F G T A C L F I T H D L R L V E R F C Q R V M V M D N G Q I V E T Q V V G E K ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89110827|ref|AP_004607.1| phosphonate/organophosphate ester transporter subunit [Escherichia coli W3110] HSP 1 e-value: 7.0E-7 bit: 52.0 Len: 255 Query Start:421 Query End:675 Subject Strand: null Subject Start: 150 Subject End: 234 .................................................................................................................................................................................................................................................................................................................................................................................................................................... I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. .................................................................................................................................................................................................................................................................................................................................................................................................................................... V S T L S G G Q Q Q R V A I A R A L M Q Q A K V I L A D E P I A S L D P E S A R I V M D T L R D I N Q N D G I T V V V T L H Q V D Y A L R Y C E R I V A L R Q G H V F Y D .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: gi|89107799|ref|AP_001579.1| fused predicted transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 1.0E-6 bit: 51.6 Len: 390 Query Start:340 Query End:729 Subject Strand: null Subject Start: 127 Subject End: 252 ................................................................................................................................................................................................................................................................................................................................................... L D K Q E I E R F L D Y M S P L F A D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L Q T N E Q T L S E L E Q H F A V E ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................................................................................................................................................................................................................................................... L D H H N L W Q L E N R I N E V L A Q L G L D P N V A L S S L S G G W L R K A A L G R A L V S N P R V L L L D E P T N H L D - - - - I E T I D W L E G F L K T F N G T I I F I S H D R S F I R N M A T R I V D L D R G K L V T Y P G N Y D Q Y L L E K E E A L R V E ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89108738|ref|AP_002518.1| fused L-arabinose transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 1.0E-6 bit: 51.6 Len: 273 Query Start:406 Query End:678 Subject Strand: null Subject Start: 392 Subject End: 481 ..................................................................................................................................................................................................................................................................................................................................................................................................................... G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K D L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................................................................................................................................................................................................................................................................................................... G A E Q L I M N L S G G N Q Q K A I L G R W L S E E M K V I L L D E P T R G I D V G A K H E I Y N V I Y A L A A Q - G V A V L F A S S D L P E V L G V A D R I V V M R E G E I A G E L ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|15898123|ref|NP_342728.1| Oligo/dipeptide transport, ATP binding protein . amino-end fragment. (dppF-2) [Sulfolobus solfataricus P2] HSP 1 e-value: 1.0E-6 bit: 51.2 Len: 231 Query Start:412 Query End:642 Subject Strand: null Subject Start: 159 Subject End: 235 ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................... N K K P M E L S G G Q R Q R V V V A R A L L L R P K F I V A D E P I S M L D A S T R G Q I L E F I L N D R D Q R G T A Y L F I T H D I S I A S Y V S D R I ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89107764|ref|AP_001544.1| fused lipid transporter subunits and membrane component and ATP-binding component of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 2.0E-6 bit: 50.4 Len: 279 Query Start:394 Query End:672 Subject Strand: null Subject Start: 471 Subject End: 558 ......................................................................................................................................................................................................................................................................................................................................................................................................... D E V L G K N K L I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I I K ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................... D T V I G E N G V L - - L S G G Q R Q R I A I A R A L L R D S P I L I L D E A T S A L D T E S E R A I Q A A L D E - - L Q K N R T S L V I A H R L S T I - E K A D E I V V V E D G V I V E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89108284|ref|AP_002064.1| predicted spermidine/putrescine transporter subunit [Escherichia coli W3110] HSP 1 e-value: 2.0E-6 bit: 50.4 Len: 234 Query Start:433 Query End:666 Subject Strand: null Subject Start: 136 Subject End: 213 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q R Q R V A I A R A L V N E P R V L L L D E P L G A L D L K L R E Q M Q L E L K K L Q Q S L G I T F I F V T H D Q G E A L S M S D R V A V F N N G R I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89109017|ref|AP_002797.1| heme exporter subunit [Escherichia coli W3110] HSP 1 e-value: 3.0E-6 bit: 50.1 Len: 234 Query Start:421 Query End:654 Subject Strand: null Subject Start: 126 Subject End: 203 .................................................................................................................................................................................................................................................................................................................................................................................................................................... I R D F S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................... V N Q L S A G Q Q R R V A L A R L W L T R A T L W I L D E P F T A I D V N G V D R L T Q R M A Q H T E Q G G I V I L T T H Q P L N V A E S K I R R I S L T Q ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89109353|ref|AP_003133.1| fused predicted sugar transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 4.0E-6 bit: 49.7 Len: 186 Query Start:57 Query End:242 Subject Strand: null Subject Start: 17 Subject End: 78 ........................................................ S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A G S D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ........................................................ N K R Y P G V V A L D N V N F T L N K G E V R A L L G K N G A G K S T L I R M L T G S E R P D S G D I W I G E T R L E G D E ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89111099|ref|AP_004879.1| fused predicted transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 4.0E-6 bit: 49.7 Len: 210 Query Start:36 Query End:245 Subject Strand: null Subject Start: 323 Subject End: 392 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I D D I P V A G S D D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ................................... V L E V S N L R K S Y G D R L L I D D L S F S I P K G A I V G I I G P N G A G K S T L F R M I S G Q E Q P D S G T I T L G E T V K L A S V D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: gi|89107318|ref|AP_001098.1| fused predicted multidrug transporter subunits and ATP-binding components of ABC superfamily [Escherichia coli W3110] HSP 1 e-value: 8.0E-6 bit: 48.5 Len: 234 Query Start:433 Query End:666 Subject Strand: null Subject Start: 474 Subject End: 548 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q K Q R I S I A R A L L V N A E I L I L D D A L S A V D G R T E H Q I L H N L R Q W G - - Q G R T V I I S A H R L S A L T E - A S E I I V M Q H G H I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: gi|89110756|ref|AP_004536.1| fused maltose transport subunit, ATP-binding component of ABC superfamily and regulatory protein [Escherichia coli W3110] HSP 1 e-value: 8.0E-6 bit: 48.5 Len: 234 Query Start:433 Query End:666 Subject Strand: null Subject Start: 135 Subject End: 212 ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S K G N Q K K I G I A A A M L S R P D I L I L D E P F T A L D P S S Q I R L K K M L N E H A T Q Y G T T M L I S S H D L N H V T E V S S R I V V L Q K G E I ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ................................................................................................................................................................................................................................................................................................................................................................................................................................................ S G G Q R Q R V A I G R T L V A E P S V F L L D E P L S N L D A A L R V Q M R I E I S R L H K R L G R T M I Y V T H D Q V E A M T L A D K I V V L D A G R V ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Find nr database================================================ Query_seq: PG1679:PG1681|PG1679:PG1681:hypothetical protein:glycogen debranching enzyme, archaeal type, putative:->->:1765331..1766551 1221 tttcgacaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 tttcgacaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Predict ORF larger than 30AA ================================================ Protein_Len: 37 Strand: + Start: 29 End: 139 ............................ M D Y D T N N R S Q Q K I Q W G Y R T G Y S P S L H K P R R N L R F G R Q .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 36 End: 245 ................................... M I Q I T D L S K K Y N G V T V L D I P H L S I S H G E T F G L V G N N G A G K T T L F R L V L D L I K A D S G S I S I ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 34 Strand: + Start: 254 End: 355 ............................................................................................................................................................................................................................................................. M S E P S S T K A S S S A S C V R R S I S I S S A S S T T S T S R R .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 238 End: 732 ............................................................................................................................................................................................................................................. M T I K G R V G A F L D E S F L I G F L R P E E Y F D F I G K L H H L D K Q E I E R F L D Y M S P L F A D E V L G K N K ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 492 End: 746 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M D P R R T V H G S R S F L T N T A E E N A Q R T C N P I R Y H H A Y L Q P R P Q P R D R S Q Q P H R S T A K R R D H Q ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 49 Strand: + Start: 755 End: 901 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M R P L G I T P S P P P L G G I S A N H L F R N T Y R K R S D S G A C L P N K V A R D F F R F G S ................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 792 End: 983 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M E E Y P Q T T S S E T R T A N A P I P V R V C R T K W R E I F F V L A R N F F T S H A K T K K F S H H V L W R Y K Q E .............................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 802 End: 1089 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M R K P P L P K H V P Q T L R F R C V F A E Q S G A R F F S F W L V I F L L P T P K R K S S R T M F Y G V I N R K I L A .................................................................................................................................... Protein_Len: 40 Strand: + Start: 1004 End: 1123 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T H S T L S C S V R P G K S S T H R L S V F Q L F I I F N L W E S A Y G S Q D .................................................................................................. Protein_Len: 47 Strand: + Start: 1011 End: 1151 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M P H S R A A F V R E N R L P T G Y L F F S C L S F L I C G N P H T V L K I E I G K T H Q N K ...................................................................... Protein_Len: 32 Strand: - Start: 962 End: 1057 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. L C S F K P A Y V L R I R S Q C M G C E R A A N T R S F R R G M .................................................................................................................................................................... Protein_Len: 31 Strand: - Start: 954 End: 1046 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... P T I F L F I K A R L G F S D S I S V N W V R T C R E D P F M ............................................................................................................................................................................... Protein_Len: 49 Strand: - Start: 913 End: 1059 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ K G R W F S F T R A G H K I A N Y V P F N Q R T F W V F G L N V C E V S E H L T R G P F D D V W M .................................................................................................................................................................. Protein_Len: 48 Strand: - Start: 782 End: 925 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. W R R K S S Y G C V V E E S V R V A F A G I G T R T Q R V F H R S I K K T K A R L K K V E W A M ........................................................................................................................................................................................................................................................................................................ Protein_Len: 58 Strand: - Start: 774 End: 947 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... E K V V A E Q L F I R L G G R G F C T G C V S R N R H T N A S C L P A L N K E N Q S T I K K S G V G F R F L E R V M .................................................................................................................................................................................................................................................................................. Protein_Len: 57 Strand: - Start: 700 End: 870 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... G F E F L V E G D F S L V V L T F R I R G K P I V G E G G G R P P I D A F W R K R F V Y R L R E S E P A H K G F M ............................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 53 Strand: - Start: 535 End: 693 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L Y P Q L F H E V F M C G L V T G G H K D G A V V E V V H G F D A A A D Y Y Q L F A L D D F V E L C V F M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 447 End: 671 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................. N I R S S G N V A R S G E E C I R S F F I S L S C A V W Y P V V M S I E L W S R L W T V S T L L R M T T S C F P S I M M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 190 End: 525 ............................................................................................................................................................................................. L L L Y L T K E V V H R G E K G I F N Q A L V F E N P I K G F P I L L L Y A Y G S G H E R A G I Y Q D E V F R E R S E M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 3 End: 356 .. E I Q D F C I A T A D G D V V D G Y R T T V I L P R T P A K R S S L K R M P K R R G S S Y K S K M P L S W W R S L C S M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 2 End: 223 . I V S R L L F Y L P T V T S S I G W R E M L W P S V K P K T P L L P A P L V V R K R R T R S R I L A S L P L M E M S S M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tttcgacaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ PromScan Matrix: RpoN Strand: - Score: 82 Start: 135 End: 151 ......................................................................................................................................CCGGCACCGTTATTGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. tttcgacaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 43 HP_score: -2.5 Tail_Score: -3.18264 Start: 251 End: 291 Full_Region: TAGTGACGATTAAGG GCCGTGTCGGAGCCTTC CTCGAC GAAAGCTTCCTCATCGGC TTCCTGCGTCCGGAG ..........................................................................................................................................................................................................................................................GCCGTGTCGGAGCCTTCCTCGACGAAAGCTTCCTCATCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 77 HP_score: -10.5 Tail_Score: -3.53444 Start: 826 End: 858 Full_Region: actttgttcggcaaa cacgcaccggaatcg gag cgtttgcggtacgtg tttcggaagaggtgg .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cacgcaccggaatcggagcgtttgcggtacgtg........................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 89 HP_score: -12.7 Tail_Score: -3.53091 Start: 826 End: 858 Full_Region: CCACCTCTTCCGAAA CACGTACCGCAAACG CTC CGATTCCGGTGCGTG TTTGCCGAACAAAGT .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTACCGCAAACGCTCCGATTCCGGTGCGTG........................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 71 HP_score: -8.3 Tail_Score: -3.61922 Start: 839 End: 856 Full_Region: tttgttcggcaaaca cgcaccg gaat cggagcg tttgcggtacgtgtt ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgcaccggaatcggagcg............................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 52 HP_score: -4.7 Tail_Score: -3.30007 Start: 884 End: 935 Full_Region: AAAGTGGCGCGAGAT TTTTTTCGTTTTGGCTCGTAATT TTTTT ACTTCCCACGCCAAAACGAAAAAG TTCTCGCACCATGTT ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCGTTTTGGCTCGTAATTTTTTTACTTCCCACGCCAAAACGAAAAAG.............................................................................................................................................................................................................................................................................................. TransTerm Strand: + Conf: 51 HP_score: -6.0 Tail_Score: -2.57683 Start: 885 End: 934 Full_Region: AAGTGGCGCGAGATT TTTTTCGTTTTGGCTCGTAATT TTTTT ACTTCCCACGCCAAAACGAAAAA GTTCTCGCACCATGT ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCGTTTTGGCTCGTAATTTTTTTACTTCCCACGCCAAAACGAAAAA............................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 73 HP_score: -3.2 Tail_Score: -4.8384 Start: 1057 End: 1067 Full_Region: AAAATCGTCTACCCA CAGG CTA TCTG TTTTTCAGTTGTTTA ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTATCTG.......................................................................................................................................................... TransTerm Strand: + Conf: 42 HP_score: -2.2 Tail_Score: -3.05844 Start: 1152 End: 1176 Full_Region: ACACATCAAAATAAG TAGCAGATAT GTGGA ATAATTGCTA TATTAGCATAAACAA ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGATATGTGGAATAATTGCTA............................................. Find igs database================================================ Query_seq: PG1679:PG1681|PG1679:PG1681:hypothetical protein:glycogen debranching enzyme, archaeal type, putative:->->:1765331..1766551 1221 tttcgacaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtggcgcgagatttttttcgttttggctcgtaatttttttacttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Intra-Species Hit: Count: 1 Min: 912 Max: 1221 Len: 310 Subject: NC_002950_PG1679_PG1681|hypothetical protein:glycogen debranching enzyme, archaeal type, putative|POSITIVE:POSITIVE|[1765331,1766551]|1221 HSP 1 e-value: 1.0E-174 bit: 615.0 Len: 310 Query Start:912 Query End:1221 Subject Strand: POSITIVE Subject Start: 912 Subject End: 1221 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................acttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................acttcccacgccaaaacgaaaaagttctcgcaccatgttttatggcgttataaacaggaaaattttggcgcgtaaaccaaacgaatccgagattgacacattccacactctcgtgcagcgttcgtccgggaaaatcgtctacccacaggctatctgtttttcagttgtttatcatttttaatctgtgggaatccgcatacggttctcaagattgagatcggaaaaacacatcaaaataagtagcagatatgtggaataattgctatattagcataaacaacactccgtagaggaagccaacaaaacgacg Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ ACUUCCCACGCCAAAACGAAAAAGUUCUCGCACCAUGUUUUAUGGCGUUAUAAACAGGAAAAUUUUGGCGCGUAAACCAAACGAAUCCGAGAUUGACACAUUCCACACUCUCGUGCAGCGUUCGUCCGGGAAAAUCGUCUACCCACAGGCUAUCUGUUUUUCAGUUGUUUAUCAUUUUUAAUCUGUGGGAAUCCGCAUACGGUUCUCAAGAUUGAGAUCGGAAAAACACAUCAAAAUAAGUAGCAGAUAUGUGGAAUAAUUGCUAUAUUAGCAUAAACAACACUCCGUAGAGGAAGCCAACAAAACGACG ..(((((.((((((((.......(((...((.(((((...))))).))....))).......))))))))..........((((((((((((.((..........)).))))).)....))))))..)))))..((.((((((((((.((((..((((((...((.((((.((..(((((((((.((((((.(((....))))))))))))))))))...)).))))))...))))))..)))).....)))))......(((((...))))).............))))).))................ (-78.94) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ CGUCGUUUUGUUGGCUUCCUCUACGGAGUGUUGUUUAUGCUAAUAUAGCAAUUAUUCCACAUAUCUGCUACUUAUUUUGAUGUGUUUUUCCGAUCUCAAUCUUGAGAACCGUAUGCGGAUUCCCACAGAUUAAAAAUGAUAAACAACUGAAAAACAGAUAGCCUGUGGGUAGACGAUUUUCCCGGACGAACGCUGCACGAGAGUGUGGAAUGUGUCAAUCUCGGAUUCGUUUGGUUUACGCGCCAAAAUUUUCCUGUUUAUAACGCCAUAAAACAUGGUGCGAGAACUUUUUCGUUUUGGCGUGGGAAGU ((((..((..(.((((..(((....))).(((((((((.......(((((..(((.....)))..)))))....(((((((.(((........(((((....))))).(((....)))......))).)))))))...)))))))))............)))).)..))..))))..((((((...((((((...(.(((((...(((......))).))))))...))))))......((((((((((......((((....((((((.....))))))...))))......)))))))))))))))). (-87.50) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 578 49 3 92 46 NC_002950:PG0313|5end_hypothetical_protein_347366..347596_POSITIVE 564 48 1 127 78 NC_002950:PG1980|5end_hypothetical_protein_2067930..2068160_NEGATIVE 550 48 1 91 42 NC_002950:PG2064|5end_hypothetical_protein_2160550..2160780_POSITIVE 440 77 31 154 111 NC_002950:PG0174|5end_pyridine_nucleotide-disulphide_oxidoreductase_family_protein_197628..197858_NEGATIVE 403 144 101 66 26 NC_002950:PG1500|5end_hypothetical_protein_1576099..1576329_POSITIVE 401 156 111 189 140 NC_002950:PG1381|5end_ABC_transporter,_permease_protein_1460622..1460852_POSITIVE 399 129 86 171 131 NC_002950:PG2140|5end_ribosomal_protein_L32_2246134..2246364_POSITIVE 382 45 2 100 57 NC_002950:PG1799|5end_hypothetical_protein_1894499..1894729_POSITIVE 370 150 106 200 162 NC_002950:PG2185|5end_transporter,_putative_2293249..2293479_NEGATIVE 367 130 82 191 132 NC_002950:PG0734|5end_nitroreductase_family_protein_783773..784003_POSITIVE 364 139 99 201 163 NC_002950:PG2179|5end_NADH-ubiquinone_oxidoreductase_2287806..2288036_NEGATIVE 361 150 101 97 41 NC_002950:PG1511|5end_hypothetical_protein_1587609..1587839_POSITIVE 357 149 101 228 176 NC_002950:PG0803|5end_glucosamine-6-phosphate_deaminase_860518..860748_NEGATIVE 356 129 81 152 98 NC_002950:PG1351|5end_hypothetical_protein_1432744..1432974_NEGATIVE 342 156 116 201 155 NC_002950:PG1952|5end_DedA_family_protein_2042870..2043100_POSITIVE 338 156 111 206 147 NC_002950:PG2032|5end_primosomal_protein_N'_2133381..2133611_NEGATIVE 338 158 111 201 146 NC_002950:PG0211|5end_cobalamin_biosynthesis_protein_CbiG/precorrin-4_C11-methyltransferase_247810..248040_NEGATIVE 336 45 3 118 78 NC_002950:PG1617|5end_hypothetical_protein_1697755..1697985_NEGATIVE 335 130 83 199 138 NC_002950:PG2173|5end_outer_membrane_lipoprotein_Omp28_2280813..2281043_NEGATIVE 334 140 92 93 38 NC_002950:PG1181|5end_transcriptional_regulator,_tetR_family_1264255..1264485_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 393 150 104 71 22 NC_002950:PG2044|3end_hypothetical_protein_2144165..2144315_POSITIVE 368 48 2 53 7 NC_002950:PG1546|3end_hypothetical_protein_1624355..1624505_POSITIVE 360 35 3 50 18 NC_002950:PG0542|3end_hypothetical_protein_595377..595527_NEGATIVE 349 155 112 54 1 NC_002950:PG1522|3end_mandelate_racemase/muconate_lactonizing_enzyme_family_protein_1599100..1599250_NEGATIVE 345 150 104 113 57 NC_002950:PG1715|3end_hypothetical_protein_1803393..1803543_NEGATIVE 333 160 112 122 66 NC_002950:PG2092|3end_hypothetical_protein_2191651..2191801_NEGATIVE 332 130 81 145 98 NC_002950:PG1632|3end_aldose_1-epimerase_1713415..1713565_POSITIVE 328 150 103 144 95 NC_002950:PG0282|3end_ABC_transporter,_ATP-binding_protein_316244..316394_NEGATIVE 326 137 92 141 103 NC_002950:PG0259|3end_hypothetical_protein_293701..293851_POSITIVE 324 130 82 65 6 NC_002950:PG0723|3end_hypothetical_protein_775355..775505_POSITIVE 319 130 88 144 95 NC_002950:PG2150|3end_LysM_domain_protein_2257667..2257817_NEGATIVE 318 126 87 82 33 NC_002950:PG1112|3end_hypothetical_protein_1185571..1185721_POSITIVE 315 129 81 62 16 NC_002950:PG1950|3end_hypothetical_protein_2040840..2040990_POSITIVE 315 129 81 134 93 NC_002950:PG1389|3end_DNA-binding_protein,_histone-like_family_1470870..1471020_NEGATIVE 314 99 54 63 12 NC_002950:PG0354|3end_hypothetical_protein_389131..389281_NEGATIVE 313 157 111 52 1 NC_002950:PG1760|3end_ABC_transporter,_ATP-binding_protein_1847216..1847366_POSITIVE 313 149 103 77 25 NC_002950:PG1371|3end_phosphorylase_family_protein_1452352..1452502_NEGATIVE 312 110 67 80 28 NC_002950:PG0793|3end_fructose-1,6-bisphosphatase_846335..846485_POSITIVE 312 130 82 82 43 NC_002950:PG0031|3end_hypothetical_protein_36905..37055_NEGATIVE 309 118 71 147 96 NC_002950:PG1352|3end_hypothetical_protein_1432737..1432887_NEGATIVE