Origin IGS: caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcagagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggcacagccgtcttggcggacaaaggatatgcttgcggggaaaatcgtttctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaaggaaacaaagcaatcggtccgatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatctctaggataaggcatacccccccttgagaagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctccttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 ttcacaattccccctttcaaccttcaaacacgtaaaaagccgtgtcaatgaagtgaaccctaaaagttggacagaaaacttttagggttcattttttatgcgaagtcgttttgaaggagacctttgaaaaataaggagatggagtaaagaggagttcttggcaaaaaaggagcgagtgaaaggggtggcagtaaggagtgaaagtagttgtaaatccccccttgaggagctgcttgcacgagcttctcaagggggggtatgccttatcctagagatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatcggaccgattgctttgtttccttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtagaaacgattttccccgcaagcatatcctttgtccgccaagacggctgtgccttgaggtatgtttgcaccctgcaatagcgcaataaactccttcgtgtcactgcggttcgctgcagtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctattatacaatgaattaacaaacaaaatatacgccaatcgccgtgcaaaggtctctgaagaatgcttggagatagtactccgtgcaaagtccgggaggcctagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactagtattcaaggtgaagaacacatctaaatgctcaaaaatacaaggaaacttgttcggtattggtgagctggatttgcgcaatggtctctaaagaggtttttaagggacgactaagtacgtctgtgagttgagtaaaagtatttgatgcagaacgatgctgcgatagcgtcagttcgacgtgagaaaaggaaagggagctttagcgtgcagaggcaggattg Mask Tandem Repeat Region ================================================ caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcagagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggcacagccgtcttggcggacaaaggatatgcttgcggggaaaatcgtttctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaaggaaacaaagcaatcggtccgatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatctctaggataaggcatacccccccttgagaagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctccttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Find is-nt database================================================ Query_seq: PG1383:PG1385|PG1383:PG1385:amino acid exporter, putative:TPR domain protein:-><-:1463448..1465222 1775 caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcagagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggcacagccgtcttggcggacaaaggatatgcttgcggggaaaatcgtttctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaaggaaacaaagcaatcggtccgatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatctctaggataaggcatacccccccttgagaagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctccttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 326 Max: 1659 Len: 1334 Subject: IS|IS1126 HSP 1 e-value: 0.0 bit: 2264.0 Len: 1334 Query Start:326 Query End:1659 Subject Strand: POSITIVE Subject Start: 1 Subject End: 1336 .....................................................................................................................................................................................................................................................................................................................................gagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggct----atggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaa-cccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtct-gaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggcacagccgtcttggcggacaaaggatatgcttgcggggaaaatcgtttctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaaggaaacaaagcaatcggtccgatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatctctaggataaggcatannnnnnnttgagaagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctc.................................................................................................................... .....................................................................................................................................................................................................................................................................................................................................gagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataataggaagttatttcgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacg-tgatcaacaagaaatacacgaagcgacaaaatgccat-ggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttgggactgaagatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggg-ctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccacataaagcccaacggaaccattacgattgaagtcgcagcgaacagagaagacaatcggagcgaggcggaaaaagaggacgaggaggattatcaaaaacaggttgtccgccggcgtaaagggacggatgaagaagcc-gttgggtgtacaaacaaaagcgttatcactacggatacaaaaagcattgtcttgaccaatgttcaaggcattgttcaaaaggtgataacgacagcagcgaaccgcagtgacacgaaggagtttattccgctattgcagggtgcaaacatacctcaaggcacagccgtcttggcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaaggaaacaaagcaatcagtccgatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatctctaggataaggcataaccccccttgaggagctcgtgcaagtacgtccgcaaggggggatttacaactactttcactccttactgccacccttttcactcgctccttttttgccaagaactcctcttccctccatctccttattttgcaaaggtctc.................................................................................................................... Find is-aa database================================================ Query_seq: PG1383:PG1385|PG1383:PG1385:amino acid exporter, putative:TPR domain protein:-><-:1463448..1465222 1775 caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG1383:PG1385|PG1383:PG1385:amino acid exporter, putative:TPR domain protein:-><-:1463448..1465222 1775 caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Predict ORF larger than 30AA ================================================ Protein_Len: 46 Strand: + Start: 50 End: 187 ................................................. M T L S Q H R S A S N T F T Q L T D V L S R P L K T S L E T I A Q I Q L T N T E Q V S L Y F .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 37 Strand: + Start: 141 End: 251 ............................................................................................................................................ M R K S S S P I P N K F P C I F E H L D V F F T L N T S P L N P F L K V N .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 49 Strand: + Start: 217 End: 363 ........................................................................................................................................................................................................................ M L V P L T R S S R S I D L E E R V K G T R P P G L C T E Y Y L Q A F F R D L C T A I G V Y F V C .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 52 Strand: + Start: 251 End: 406 .......................................................................................................................................................................................................................................................... M T L R N G L R G L G L P D F A R S T I S K H S S E T F A R R L A Y I L F V N S L Y N R E L F C I F E Y ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: + Start: 294 End: 464 ..................................................................................................................................................................................................................................................................................................... M H G V L S P S I L Q R P L H G D W R I F C L L I H C I I G S Y F V Y L S I K N S I I F L P W H T N P R I P M S M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: + Start: 471 End: 566 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q T H S F Q S V I A K H K T T S S I R L R G L S I G V R S G R ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 422 End: 784 ..................................................................................................................................................................................................................................................................................................................................................................................................................................... M P P M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V E R L I D W R P I R T L I N K K Y T K R Q N A ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 51 Strand: + Start: 672 End: 824 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M I V L W R S A S M I Q S P F P D S W G Y G R G I S R P Q H H Q S I S F G T D R V G A H G Q T I G A V ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 845 End: 1087 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M T F R S G K G C L S M Q A L W R R R I N P T E A L R L K S Q T T E K T I G A R R K K R Q R R I I K N R L S V S V K G R ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 35 Strand: + Start: 1038 End: 1142 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M G L Q T K A L S L R I Q K A L S D Q C S R H C S K G D N D C S E P Q ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 59 Strand: + Start: 1127 End: 1303 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q R T A V T R R S L L R Y C R V Q T Y L K A Q P S W R T K D M L A G K I V S T C K P I T F K T A S C T R H N A T G H ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: + Start: 1167 End: 1448 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M A G C K H T S R H S R L G G Q R I C L R G K S F L P A N P S P S R R H H A Q G T T Q Q G I D R G R E A R K Q S N R S D ....................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: + Start: 1370 End: 1486 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M A V F A G G F M A D D V D T G D L P R P I L K T F L K A S P L I Y T E P R G ................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 721 End: 1509 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M L G A M E E V S P D H S T I S R F R S A L T E L G L M D K L L A Q F N K Q L S R H H I S V R E G V L V D A S L V E T P .......................................................................................................................................................................................................................................................................... Protein_Len: 54 Strand: + Start: 1516 End: 1677 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M P P L E K L V Q A A P Q G G I Y N Y F H S L L P P L S L A P F L P R T P L Y S I S L F F K G L L Q N D F A .................................................................................................. Protein_Len: 53 Strand: + Start: 1526 End: 1684 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R S S C K Q L L K G G F T T T F T P Y C H P F H S L L F C Q E L L F T P S P Y F S K V S F K T T S H K K ........................................................................................... Protein_Len: 51 Strand: - Start: 1493 End: 1645 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... T R M E L I L C V G G Q S A R A L L E E L P S K C S S E S R V A V G K V R E K K A L F E E K S W R R M .................................................................................................................................. Protein_Len: 45 Strand: - Start: 1277 End: 1411 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ A C P V V C C P M S R P L S A L F C L L R D S V S C W R V C R Q C Y E G T T E H R V I D M ............................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 38 Strand: - Start: 1266 End: 1379 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. S P M M C L A C R L L A N V S S S F C P F L A I P G I R L V M S R V K P L M ............................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 1168 End: 1467 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L A V P C Q G L F L L L S V F C D T R Y P A G D F A G K A T N A P P K M A S S T S V P S K G L G M S L V N K F A D G K M .................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 923 End: 1132 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... D S R P P F L P L P P N D F V P Q G D A Y L S P H L L G N P K C V F A N D S R I C F A N D S W H E L C Q E F P S L S Q M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: - Start: 849 End: 953 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M E T L S P T S T S A L R T S V G C L G L P L M V I S T A S S L S S M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 814 End: 1113 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. C V V S F V I P A L L F F L C L L I I L F L N D T L T F P R I F F G T P N V F L L T I V V S V F L M T Q G I N L A N N M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 40 Strand: - Start: 711 End: 830 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R K G I R P A I S S T D G S W L V M L R N R E A S V S N P S M S L S N A C N L M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 46 Strand: - Start: 619 End: 756 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S T I R K N L I N S K S V H Y L R L S Q A K S S R M L S E I V K E R N K P S H F L Y R G V M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 43 Strand: - Start: 491 End: 619 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L T I A F C L V V E E I L N L P K D I P T R D P R Q D V L F V G L S L I G D A G R S M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 48 Strand: - Start: 366 End: 509 ............................................................................................................................................................................................................................................................................................................................................................................. N M T Y Y P T I K Y I Q T N F V A Y Y E E W P M G I W S Y R H A H L M Q L R V G K L A N D C L M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 49 Strand: - Start: 250 End: 396 ......................................................................................................................................................................................................................................................... N V K L F P N L P S P R G S K A R L V I E L C E E S V K A R R N A Y I K N T L E N Y L L S N N Q M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: - Start: 198 End: 299 ..................................................................................................................................................................................................... I H E E G Q I S T G K V R E E L D I S R S S R T L P V L G G P S Q M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: - Start: 134 End: 250 ..................................................................................................................................... L G N R L D L E G I G F L N G Q I K S C K S T N K V K F V L G R L G N R L T M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 81 Start: 370 End: 399 .................................................................................................................................................................................................................................................................................................................................................................................ATTGTATAATAGGGAGTTATTTTGTATATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 100 HP_score: -24.4 Tail_Score: -3.04144 Start: 220 End: 278 Full_Region: agtccgggaggccta gtccccttaacccgttcctcaaggtc aatt gaccttgaggaacgggttaaggggactag tattcaaggtgaaga ...........................................................................................................................................................................................................................gtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactag......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -42.4 Tail_Score: -2.74523 Start: 223 End: 278 Full_Region: agtccgggaggccta gtccccttaacccgttcctcaaggtc aatt gaccttgaggaacgggttaaggggac tagtattcaaggtga ..............................................................................................................................................................................................................................gtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggac......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 43 HP_score: -3.4 Tail_Score: -2.60808 Start: 1288 End: 1305 Full_Region: cttctcttcctcggt caatgc cctgtt gcgttg tgccttgtgcatgat .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................caatgccctgttgcgttg...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 44 HP_score: -4.3 Tail_Score: -2.57463 Start: 1491 End: 1518 Full_Region: cttctcaaggggggg tatgccttatc ctaga gatgaggacata attatccccggggtt ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatgccttatcctagagatgaggacata................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 90 HP_score: -13.7 Tail_Score: -3.41051 Start: 1513 End: 1567 Full_Region: aggagtgaaagtagt tgtaaatccccccttgaggagct gcttgcacg agcttctcaagggggggtatgcc ttatcctagagatga ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgtaaatccccccttgaggagctgcttgcacgagcttctcaagggggggtatgcc................................................................................................................................................................................................................ TransTerm Strand: - Conf: 100 HP_score: -17.2 Tail_Score: -2.64416 Start: 1514 End: 1566 Full_Region: ggagtgaaagtagtt gtaaatccccccttgaggagct gcttgcacg agcttctcaagggggggtatgc cttatcctagagatg .........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gtaaatccccccttgaggagctgcttgcacgagcttctcaagggggggtatgc................................................................................................................................................................................................................. TransTerm Strand: + Conf: 90 HP_score: -13.5 Tail_Score: -3.6003 Start: 1519 End: 1561 Full_Region: CTAGGATAAGGCATA CCCCCCCTTGAGAAGCTCGT GCAA GCAGCTCCTCAAGGGGGGA TTTACAACTACTTTC ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCCTTGAGAAGCTCGTGCAAGCAGCTCCTCAAGGGGGGA...................................................................................................................................................................................................................... TransTerm Strand: + Conf: 95 HP_score: -17.0 Tail_Score: -2.75536 Start: 1520 End: 1560 Full_Region: TAGGATAAGGCATAC CCCCCCTTGAGAAGCTCGT GCAA GCAGCTCCTCAAGGGGGG ATTTACAACTACTTT ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCTTGAGAAGCTCGTGCAAGCAGCTCCTCAAGGGGGG....................................................................................................................................................................................................................... TransTerm Strand: + Conf: 79 HP_score: -11.0 Tail_Score: -3.33815 Start: 1684 End: 1723 Full_Region: GACTTCGCATAAAAA ATGAACCCTAAAAGTT TTCTGTCC AACTTTTAGGGTTCAC TTCATTGACACGGCT ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACCCTAAAAGTTTTCTGTCCAACTTTTAGGGTTCAC.................................................... TransTerm Strand: - Conf: 100 HP_score: -14.5 Tail_Score: -5.24531 Start: 1685 End: 1722 Full_Region: gccgtgtcaatgaag tgaaccctaaaagtt ggacagaa aacttttagggttca ttttttatgcgaagt ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tgaaccctaaaagttggacagaaaacttttagggttca..................................................... Find igs database================================================ Query_seq: PG1383:PG1385|PG1383:PG1385:amino acid exporter, putative:TPR domain protein:-><-:1463448..1465222 1775 caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa Intra-Species Hit: Count: 1 Min: 1 Max: 1775 Len: 1775 Subject: NC_002950_PG1383_PG1385|amino acid exporter, putative:TPR domain protein|POSITIVE:NEGATIVE|[1463448,1465222]|1775 HSP 1 e-value: 0.0 bit: 644.0 Len: 325 Query Start:1 Query End:325 Subject Strand: POSITIVE Subject Start: 1 Subject End: 325 caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... caatcctgcctctgcacgctaaagctccctttccttttctcacgtcgaactgacgctatcgcagcatcgttctgcatcaaatacttttactcaactcacagacgtacttagtcgtcccttaaaaacctctttagagaccattgcgcaaatccagctcaccaataccgaacaagtttccttgtatttttgagcatttagatgtgttcttcaccttgaatactagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactaggcctcccggactttgcacggagtactatctccaagcattcttca.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-58 bit: 230.0 Len: 116 Query Start:1660 Query End:1775 Subject Strand: POSITIVE Subject Start: 1660 Subject End: 1775 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttcaaaacgacttcgcataaaaaatgaaccctaaaagttttctgtccaacttttagggttcacttcattgacacggctttttacgtgtttgaaggttgaaagggggaattgtgaa HSP 3 e-value: 2.0E-26 bit: 123.0 Len: 62 Query Start:220 Query End:281 Subject Strand: NEGATIVE Subject Start: 220 Subject End: 281 ...........................................................................................................................................................................................................................ctagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactag...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...........................................................................................................................................................................................................................ctagtccccttaacccgttcctcaaggtcaattgaccttgaggaacgggttaaggggactag...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ CAAUCCUGCCUCUGCACGCUAAAGCUCCCUUUCCUUUUCUCACGUCGAACUGACGCUAUCGCAGCAUCGUUCUGCAUCAAAUACUUUUACUCAACUCACAGACGUACUUAGUCGUCCCUUAAAAACCUCUUUAGAGACCAUUGCGCAAAUCCAGCUCACCAAUACCGAACAAGUUUCCUUGUAUUUUUGAGCAUUUAGAUGUGUUCUUCACCUUGAAUACUAGUCCCCUUAACCCGUUCCUCAAGGUCAAUUGACCUUGAGGAACGGGUUAAGGGGACUAGGCCUCCCGGACUUUGCACGGAGUACUAUCUCCAAGCAUUCUUCAGAGACCUUUGCACGGCGAUUGGCGUAUAUUUUGUUUGUUAAUUCAUUGUAUAAUAGGGAGUUAUUUUGUAUAUUUGAGUAUUAAAAACAGCAUAAUAUUCCUCCCAUGGCAUACCAAUCCAAGAAUACCGAUGAGCAUGUAACAUUUGCAGACGCACUCCUUUCAAAGCGUUAUCGCAAAGCACAAAACGACUUCCUCAAUCAGGUUGAGAGGCUUAUCGAUUGGCGUCCGAUCAGGACGCUGAUCAACAAGAAAUACACCAAGCGACAAAAUGCCAUCGGCGCCCCGGCUUAUGACGUGAUUCUCUUAUUCAAGAUGUUGCUUUUGGAGACAUGGUACAACCUCAGUGAUUGUGCUUUGGAGGAGCGCAUCAAUGAUUCAAUCACCUUUUCCCGAUUCUUGGGGCUAUGGAAGAGGUAUCUCCCGACCACAGCACCAUCAGUCGAUUUCGUUCGGCACUGACAGAGUUGGGGCUCAUGGACAAACUAUUGGCGCAGUUUAACAAACAACUUUCCCGCCAUCACAUUUCGGUCAGGGAAGGGGUGCUUGUCGAUGCAAGCCUUGUGGAGACGCCGCAUAAACCCAACGGAAGCAUUACGAUUGAAGUCGCAGACGACAGAGAAGACAAUCGGAGCGAGGAGGAAAAAGAGGCAGAGGAGGAUUAUCAAAAACAGGUUGUCCGUCAGCGUAAAGGGACGGAUGAAGAAGCCCGUUGGGUUUACAAACAAAAGCGUUAUCACUACGGAUACAAAAAGCAUUGUCUGACCAAUGUUCAAGGCAUUGUUCAAAAGGUGAUAACGACUGCAGCGAACCGCAGUGACACGAAGGAGUUUAUUGCGCUAUUGCAGGGUGCAAACAUACCUCAAGGCACAGCCGUCUUGGCGGACAAAGGAUAUGCUUGCGGGGAAAAUCGUUUCUACCUGCAAACCCAUCACCUUCAAGACGGCAUCAUGCACAAGGCACAACGCAACAGGGCAUUGACCGAGGAAGAGAAGCAAGGAAACAAAGCAAUCGGUCCGAUACGGAGCACCAUCGAACGCACCUUUGGCAGUAUUCGCCGGUGGUUUCAUGGCGGACGAUGUCGAUACCGGGGACUUGCCAAGACCCAUACUCAAAACAUUCUUGAAAGCAUCGCCUUUAAUUUAUACAGAACCCCGGGGAUAAUUAUGUCCUCAUCUCUAGGAUAAGGCAUACCCCCCCUUGAGAAGCUCGUGCAAGCAGCUCCUCAAGGGGGGAUUUACAACUACUUUCACUCCUUACUGCCACCCCUUUCACUCGCUCCUUUUUUGCCAAGAACUCCUCUUUACUCCAUCUCCUUAUUUUUCAAAGGUCUCCUUCAAAACGACUUCGCAUAAAAAAUGAACCCUAAAAGUUUUCUGUCCAACUUUUAGGGUUCACUUCAUUGACACGGCUUUUUACGUGUUUGAAGGUUGAAAGGGGGAAUUGUGAA ................(((.....(((((((((.(((((((..((((..(((..(((.(((..((((((.((((((.....(((........(((..(((((.(((((((((((((......(((..(((((..(((....(((((((((((.(((((..(((((.(((.....)))...)))))..))))).........(((((........)))))(((((((((((((((((((((((((((((....))))))))))))))))))))))))))))).......))).)))))..((((......))))..))).)))..)))))..)))....))))))))).))))..)))))..)))..((((((((((....(((((.((((.(((...(((........)))...))).))))...))))).(((....)))........))).)))))))...))).....)))))).(((((((((((...(((((.((.((((((((((..((((((........)))))).((((......(((..((((((.....))))))..)))............(((.(((((((..(((.(((.(((......))).))).))).....((((....)))))))))))..((....)).)))....)))).....))))))))))))..))))).....(((((......((...(((((((((((((.(((.(((..(.((.....)))..))).))).)))...(((((......)))))......)))))))))).....)).........(((((.((((........))))....))))).........))))).)))))))))))....))))))..((...(((....))).))..........))).)))....((((....))))))).)))).))))))).....((((..(((((((......((((((((((((...((((.......(..((((((..(.....).))))))..)....((((((((.(((............((((((((((.((((((..........))))))..((((((.....)))))).......))))))))))..(((.((((..(((((((((.(....).).))))))))...))))...(((((......((....))....((((((((((.((......(((..(.(((((((((((....))))..))))))).)..))).)).))))))))))....)))))...))).))).)))).)))).)))).((((..((((..((..(....).........(.((((...)))).)..........)).....((((((((.((.((((.(((((..((..((.((((((.......(((..((.....)).)))....((((.......))))..)))))))).........))..))))))))).))....((((.(((.(((.....))).))))))).(((((((((((.((((.((....)))))).)))))))))))......................))))))))...))))..)))).))))))))))))......)))))))..))))....((((........))))...((((((....................(((((((((((((((........))))))))))))))).......((((((........))))))))))))..)))))))))....))).. (-596.60) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUCACAAUUCCCCCUUUCAACCUUCAAACACGUAAAAAGCCGUGUCAAUGAAGUGAACCCUAAAAGUUGGACAGAAAACUUUUAGGGUUCAUUUUUUAUGCGAAGUCGUUUUGAAGGAGACCUUUGAAAAAUAAGGAGAUGGAGUAAAGAGGAGUUCUUGGCAAAAAAGGAGCGAGUGAAAGGGGUGGCAGUAAGGAGUGAAAGUAGUUGUAAAUCCCCCCUUGAGGAGCUGCUUGCACGAGCUUCUCAAGGGGGGGUAUGCCUUAUCCUAGAGAUGAGGACAUAAUUAUCCCCGGGGUUCUGUAUAAAUUAAAGGCGAUGCUUUCAAGAAUGUUUUGAGUAUGGGUCUUGGCAAGUCCCCGGUAUCGACAUCGUCCGCCAUGAAACCACCGGCGAAUACUGCCAAAGGUGCGUUCGAUGGUGCUCCGUAUCGGACCGAUUGCUUUGUUUCCUUGCUUCUCUUCCUCGGUCAAUGCCCUGUUGCGUUGUGCCUUGUGCAUGAUGCCGUCUUGAAGGUGAUGGGUUUGCAGGUAGAAACGAUUUUCCCCGCAAGCAUAUCCUUUGUCCGCCAAGACGGCUGUGCCUUGAGGUAUGUUUGCACCCUGCAAUAGCGCAAUAAACUCCUUCGUGUCACUGCGGUUCGCUGCAGUCGUUAUCACCUUUUGAACAAUGCCUUGAACAUUGGUCAGACAAUGCUUUUUGUAUCCGUAGUGAUAACGCUUUUGUUUGUAAACCCAACGGGCUUCUUCAUCCGUCCCUUUACGCUGACGGACAACCUGUUUUUGAUAAUCCUCCUCUGCCUCUUUUUCCUCCUCGCUCCGAUUGUCUUCUCUGUCGUCUGCGACUUCAAUCGUAAUGCUUCCGUUGGGUUUAUGCGGCGUCUCCACAAGGCUUGCAUCGACAAGCACCCCUUCCCUGACCGAAAUGUGAUGGCGGGAAAGUUGUUUGUUAAACUGCGCCAAUAGUUUGUCCAUGAGCCCCAACUCUGUCAGUGCCGAACGAAAUCGACUGAUGGUGCUGUGGUCGGGAGAUACCUCUUCCAUAGCCCCAAGAAUCGGGAAAAGGUGAUUGAAUCAUUGAUGCGCUCCUCCAAAGCACAAUCACUGAGGUUGUACCAUGUCUCCAAAAGCAACAUCUUGAAUAAGAGAAUCACGUCAUAAGCCGGGGCGCCGAUGGCAUUUUGUCGCUUGGUGUAUUUCUUGUUGAUCAGCGUCCUGAUCGGACGCCAAUCGAUAAGCCUCUCAACCUGAUUGAGGAAGUCGUUUUGUGCUUUGCGAUAACGCUUUGAAAGGAGUGCGUCUGCAAAUGUUACAUGCUCAUCGGUAUUCUUGGAUUGGUAUGCCAUGGGAGGAAUAUUAUGCUGUUUUUAAUACUCAAAUAUACAAAAUAACUCCCUAUUAUACAAUGAAUUAACAAACAAAAUAUACGCCAAUCGCCGUGCAAAGGUCUCUGAAGAAUGCUUGGAGAUAGUACUCCGUGCAAAGUCCGGGAGGCCUAGUCCCCUUAACCCGUUCCUCAAGGUCAAUUGACCUUGAGGAACGGGUUAAGGGGACUAGUAUUCAAGGUGAAGAACACAUCUAAAUGCUCAAAAAUACAAGGAAACUUGUUCGGUAUUGGUGAGCUGGAUUUGCGCAAUGGUCUCUAAAGAGGUUUUUAAGGGACGACUAAGUACGUCUGUGAGUUGAGUAAAAGUAUUUGAUGCAGAACGAUGCUGCGAUAGCGUCAGUUCGACGUGAGAAAAGGAAAGGGAGCUUUAGCGUGCAGAGGCAGGAUUG ..............((((((((((((((.(((........(((((....(((((((((((((((((((........)))))))))))))))))))..)))))....)))))))))))......))))))...((((.((((((.....(((((((((.(((((...((((((....(((..((((.((.(((((((((..((((((((((.....((((((((((((((((.(......))))))))))))))))).(((((((((((.....))))))).)))).......((((((...(((........(((((.((((..((((((...)))))))))).).)))).)))...))))))..((((.((.(..((((((..(((((((((((.....))))...)))).)))..))))))..).)).))))..))))))))))..))))))))).))...))))..)))......(((((((((((((...(((((....(((((((((..((.((((.((((((.((.((((....)))).)).)))))).))))......))..))))))))).(((((....)))))...)))))...)).)))))))))))..))))))..))))).((.((((..(.((((.(((((((((..(((((.(((((.......))))).)))))..((((.....)))).....)))))))))...))))..)..))))))..)))))))))..))))))))))..((..(((((.....)))))..)).(((((((((((((((((((((((((.(((((..((((((........((((....))))..))))))....(((..(((((......(((((((((..............(((..((((((...((((...((((...(((((((((((......(((((((((((......((((.(((....(((((((((((......((((((..(((......)))))))))((.(((((((...((((....)))).))))))).)).......))).....(((((.........(((((((((((.((((((((((((.....))))))....((((....((((((.((...(((....((((..................(((((((((((.....)))).)))))))....(((((((((..((((((.....))))))..)))))))))..))))..(((.....)))...)))...))))))))..))))..))))))..))))))))))).......)))))..)))))).)).))).))))....(((((....(((((...((((.((.(((.(((.......))).))))).)))).)))))...)))))......)))))))))))......)))).)))).))).....))))...))))..))))))..))).(((((..(((((((.(((..(((..(((((((((((((((((((((((((((((....)))))))))))))))))))))))))))))..))).(((((.......)))))....(((((..((((((((....))))).....)))..))))).))))))))))....((((((.((((...)))).)))))).....))))).(((((..((..((((....))))..)))))))..))))))))).)))))..))).....)))))...))))))))))).........))))))).))))))) (-649.09) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1022 570 521 177 128 NC_002950:PG2058|5end_ISPg5,_transposase_Orf1_2156390..2156620_NEGATIVE 934 520 471 224 175 NC_002950:PG1350|5end_ISPg2,_transposase_1430866..1431096_POSITIVE 914 470 421 223 174 NC_002950:PG0459|5end_ISPg5,_transposase_Orf1_501894..502124_NEGATIVE 808 448 401 231 184 NC_002950:PG1447|5end_transcriptional_regulator,_AraC_family_1532211..1532441_NEGATIVE 808 448 401 231 184 NC_002950:PG0826|5end_transcriptional_regulator,_AraC_family_883221..883451_POSITIVE 788 370 325 170 125 NC_002950:PG1198|5end_hypothetical_protein_1276650..1276880_POSITIVE 785 370 322 221 170 NC_002950:PG0851|5end_hypothetical_protein_912732..912962_NEGATIVE 639 1560 1520 108 68 NC_002950:PG0938|5end_calcium-transporting_ATPase_1000385..1000615_NEGATIVE 599 358 313 231 193 NC_002950:PG1625|5end_hypothetical_protein_1707436..1707666_POSITIVE 573 1558 1520 231 193 NC_002950:PG1176|5end_ABC_transporter,_ATP-binding_protein,_putative_1257644..1257874_NEGATIVE 552 1725 1685 107 67 NC_002950:PG0554|5end_hypothetical_protein_611465..611695_POSITIVE 546 354 312 231 195 NC_002950:PG1032|5end_ISPg3,_transposase_1094333..1094563_POSITIVE 459 1310 1261 162 108 NC_002950:PG0744|5end_RNA_methyltransferase,_TrmH_family_791897..792127_NEGATIVE 448 1389 1343 118 75 NC_002950:PG1388|5end_hypothetical_protein_1470889..1471119_NEGATIVE 430 1419 1377 114 65 NC_002950:PG0450|5end_hypothetical_protein_490812..491042_POSITIVE 426 1400 1354 170 123 NC_002950:PG1495|5end_DNA_topoisomerase_III_1571243..1571473_POSITIVE 419 810 761 215 152 NC_002950:PG0986|5end_hypothetical_protein_1047426..1047656_POSITIVE 417 809 766 216 161 NC_002950:PG1743|5end_2-dehydro-3-deoxyphosphooctonate_aldolase_1828348..1828578_NEGATIVE 416 749 709 231 198 NC_002950:PG1946|5end_ABC_3_transporter_family_protein_2032133..2032363_POSITIVE 413 349 301 62 20 NC_002950:PG0280|5end_ABC_transporter,_permease_protein,_putative_314625..314855_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 917 1620 1571 53 4 NC_002950:PG1196|3end_hypothetical_protein_1275359..1275509_POSITIVE 909 460 411 77 28 NC_002950:PG1350|3end_ISPg2,_transposase_1432076..1432226_POSITIVE 838 1629 1585 45 1 NC_002950:PG1449|3end_hypothetical_protein_1533582..1533732_NEGATIVE 838 1629 1585 45 1 NC_002950:PG0824|3end_hypothetical_protein_881930..882080_POSITIVE 639 1560 1520 83 43 NC_002950:PG1906|3end_ISPg1,_transposase_2006572..2006722_POSITIVE 639 1560 1520 83 43 NC_002950:PG1624|3end_ISPg1,_transposase_1706188..1706338_NEGATIVE 639 1560 1520 83 43 NC_002950:PG1448|3end_ISPg1,_transposase_1533449..1533599_POSITIVE 639 1560 1520 83 43 NC_002950:PG1320|3end_ISPg1,_transposase,_internal_deletion_1399467..1399617_POSITIVE 639 1560 1520 83 43 NC_002950:PG1197|3end_ISPg1,_transposase_1275475..1275625_NEGATIVE 639 1560 1520 83 43 NC_002950:PG1177|3end_ISPg1,_transposase_1257794..1257944_NEGATIVE 639 1560 1520 83 43 NC_002950:PG1031|3end_ISPg1,_transposase_1093081..1093231_NEGATIVE 639 1560 1520 83 43 NC_002950:PG0825|3end_ISPg1,_transposase_882063..882213_NEGATIVE 639 1560 1520 83 43 NC_002950:PG0184|3end_ISPg1,_transposase_217567..217717_POSITIVE 584 1560 1520 83 43 NC_002950:PG1244|3end_ISPg1,_transposase_1320699..1320849_POSITIVE 584 1560 1520 83 43 NC_002950:PG0549|3end_ISPg1,_transposase_605987..606137_NEGATIVE 584 1560 1520 83 43 NC_002950:PG0460|3end_ISPg1,_transposase_503102..503252_POSITIVE 539 150 101 127 65 NC_002950:PG0461|3end_ISPg7,_transposase_503439..503589_NEGATIVE 537 189 150 40 1 NC_002950:PG0740|3end_NLP/P60_family_protein_788485..788635_POSITIVE 465 918 871 140 69 NC_002950:PG0815|3end_hypothetical_protein_876447..876597_POSITIVE 459 1310 1261 77 23 NC_002950:PG0745|3end_lactoylglutathione_lyase,_putative_791982..792132_NEGATIVE