Origin IGS: gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtgagacctttgcaaaataaggaggtggagggaagaggagttcttggcaaaaaaggagcgagtgaaaggggtggcagtaaggagtgaaagtagttgtaaatccccccttgaggagctgcttgcacgagctcctcaaggggggttatgccttatcctacaaatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatccgactgattgctttgtttcgttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgccaagacggctgagccttgaggtatgtttgcaccctgcaatagcgcaataaactccttcgtgtcactgcggttcgctgcagtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctactatacaatcaattaacaagcaaaatacacaccaatcgccatgcaaaggtc .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 gacctttgcatggcgattggtgtgtattttgcttgttaattgattgtatagtagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggctcagccgtcttggcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaacgaaacaaagcaatcagtcggatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatttgtaggataaggcataaccccccttgaggagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctcttccctccacctccttattttgcaaaggtctcacaatggtattttcccgaccaaaaagatctgtcgcgtggctcttggaacggtcggaaaggttagcaaccggcctttctcccgtttttttcctcccgatggcatggctgttctcccgattgatacgtgtgaaaaacgtagaggtaaaagaagggggagccggcacgtggtcggctccccctcttcgtatgtgtgtgttcggcagtggtc Mask Tandem Repeat Region ================================================ gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtgagacctttgcaaaataaggaggtggagggaagaggagttcttggcaaaaaaggagcgagtgaaaggggtggcagtaaggagtgaaagtagttgtaaatccccccttgaggagctgcttgcacgagctcctcaaggggggttatgccttatcctacaaatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatccgactgattgctttgtttcgttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgccaagacggctgagccttgaggtatgtttgcaccctgcaatagcgcaataaactccttcgtgtcactgcggttcgctgcagtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctactatacaatcaattaacaagcaaaatacacaccaatcgccatgcaaaggtc Find is-nt database================================================ Query_seq: PG1226:PG1229|PG1226:PG1229:peptidyl-prolyl cis-trans isomerase, cyclophilin-type:hypothetical protein:-><-:1304109..1305648 1540 gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtgagacctttgcaaaataaggaggtggagggaagaggagttcttggcaaaaaaggagcgagtgaaaggggtggcagtaaggagtgaaagtagttgtaaatccccccttgaggagctgcttgcacgagctcctcaaggggggttatgccttatcctacaaatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatccgactgattgctttgtttcgttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgccaagacggctgagccttgaggtatgtttgcaccctgcaatagcgcaataaactccttcgtgtcactgcggttcgctgcagtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctactatacaatcaattaacaagcaaaatacacaccaatcgccatgcaaaggtc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 209 Max: 1540 Len: 1332 Subject: IS|IS1126 HSP 1 e-value: 0.0 bit: 2254.0 Len: 1332 Query Start:209 Query End:1540 Subject Strand: NEGATIVE Subject Start: 3 Subject End: 1336 ................................................................................................................................................................................................................gagacctttgcaaaataaggaggtggagggaagaggagttcttggcaaaaaaggagcgagtgaaaggggtggcagtaaggagtgaaagtagttgtaaatccccccttgaggagctgcttgcacgagctcctcaaggggggttatgccttatcctacaaatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatccgactgattgctttgtttcgttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgccaagacggctgagccttgaggtatgtttgcaccctgcaatagcgcaataaactccttcgtgtcactgcggttcgctgcagtcgttatcaccttttgaacaatgccttgaacattggtc-agacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttggg-tttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccat----agccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctactatacaatcaattaacaagcaaaatacacaccaatcgccatgcaaaggtc ................................................................................................................................................................................................................gagacctttgcaaaataaggagatggagggaagaggagttcttggcaaaaaaggagcgagtgaaaagggtggcagtaaggagtgaaagtagttgtaaatccccccttgcggacgtacttgcacgagctcctcaaggggggttatgccttatcctagagatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatcggactgattgctttgtttccttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgccaagacggctgtgccttgaggtatgtttgcaccctgcaatagcggaataaactccttcgtgtcactgcggttcgctgctgtcgttatcaccttttgaacaatgccttgaacattggtcaagacaatgctttttgtatccgtagtgataacgcttttgtttgtacacccaac-ggcttcttcatccgtccctttacgccggcggacaacctgtttttgataatcctcctcgtcctctttttccgcctcgctccgattgtcttctctgttcgctgcgacttcaatcgtaatggttccgttgggctttatgtggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgag-cccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatcttcagtcccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgcc-atggcattttgtcgcttcgtgtatttcttgttgatca-cgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacgaaataacttcctattatacaatgaattaacaaacaaaatatacgccaatcgccgtgcaaaggtc Find is-aa database================================================ Query_seq: PG1226:PG1229|PG1226:PG1229:peptidyl-prolyl cis-trans isomerase, cyclophilin-type:hypothetical protein:-><-:1304109..1305648 1540 gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG1226:PG1229|PG1226:PG1229:peptidyl-prolyl cis-trans isomerase, cyclophilin-type:hypothetical protein:-><-:1304109..1305648 1540 gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn Predict ORF larger than 30AA ================================================ Protein_Len: 39 Strand: + Start: 91 End: 207 .......................................................................................... M G R T A M P S G G K K R E K G R L L T F P T V P R A T R Q I F L V G K I P L ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 6 End: 290 ..... M P N T H I R R G G A D H V P A P P S F T S T F F T R I N R E N S H A I G R K K T G E R P V A N L S D R S K S H A T D L .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 51 Strand: + Start: 223 End: 375 .............................................................................................................................................................................................................................. M R R W R E E E F L A K K E R V K G V A V R S E S S C K S P L E E L L A R A P Q G G L C L I L Q M R T ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 38 Strand: + Start: 489 End: 602 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M L P K V R S M V L R I R L I A L F R C F S S S V N A L L R C A L C M M P S .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 401 End: 670 ................................................................................................................................................................................................................................................................................................................................................................................................................ M K G D A F K N V L S M G L G K S P V S T S S A M K P P A N T A K G A F D G A P Y P T D C F V S L L L F L G Q C P V A L ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 736 End: 945 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q S L S P F E Q C L E H W S D N A F C I R S D N A F V C K P N G L L H P S L Y A D G Q P V F D N P P L P L F P P R S D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: + Start: 915 End: 1019 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M S S L S S A T S I V M L P L G L C G V S T R L A S T S T P S L T E M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 755 End: 1054 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M N N A L N I G Q T M L F V S V V I T L L F V N P T G F F I R P F T L T D N L F L I I L L C L F F L L A P I V F S V V C ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 40 Strand: + Start: 1038 End: 1157 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M L N C A N S L S M S P N S V S A E R N R L M V L W S G D T S S I A P R I G K R ............................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 46 Strand: + Start: 1112 End: 1249 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M V G R Y L F H S P K N R E K V I E S L M R S S K A Q S L R L Y H V S K S N I L N K R I T S ................................................................................................................................................................................................................................................................................................... Protein_Len: 43 Strand: + Start: 1249 End: 1377 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M S R G A D G I L S L G V F L V D Q R P D R T P I D K P L N L I E E V V L C F A I T L ................................................................................................................................................................... Protein_Len: 48 Strand: + Start: 1359 End: 1502 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M L C D N A L K G V R L Q M L H A H R Y S W I G M P W E E Y Y A V F N T Q I Y K I T P Y Y T I N ...................................... Protein_Len: 44 Strand: - Start: 1404 End: 1535 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S M P I R P N T H W P L F I I S N K I S L Y V F Y S G V I C D I L L C F V C W D G H M ..... Protein_Len: 32 Strand: - Start: 1302 End: 1397 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R G S R V G I S L G R L R I S S T T K H K A I V S Q F S H T Q M ............................................................................................................................................... Protein_Len: 60 Strand: - Start: 1084 End: 1446 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... A N Q R K T Y K K N I L T R I P R W D I L R E V Q N L F D N Q A K R Y R K S L L A D A F T V H E D T N K S Q Y A M P P M .............................................................................................. Protein_Len: 51 Strand: - Start: 1044 End: 1196 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... V A G I T Q G H A G V R D T G F S I S Q H H Q P R S I G R G Y G W S D P F P S Q I M S A S R W L V I M ........................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 781 End: 1023 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ R G K V S V S L R N K I I R R Q R K K R R A G I T K E T T Q S K L R L A E T P N I R R R W L A Q M S L C G K G S R F T M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: - Start: 726 End: 830 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q P E S C D N D G K S C H R S C Q D S L A K Q I R L S L A K T Q L G M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 59 Strand: - Start: 565 End: 741 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H G T A N H R T C S A T K F T I P K C T P V I K G A L M D K T R W S P Q A K L Y T Q V R C Y R L L S R R T V A T R Q M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 420 End: 701 ................................................................................................................................................................................................................................................................................................................................................................................................................................... D S Q N S Q K T A E R G R D I G Q Q T T G Q A H H R R S P S P N A P L F S K G R L C I R Q G G L R S L R S T H K C G A M ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: - Start: 382 End: 498 ............................................................................................................................................................................................................................................................................................................................................................................................. G R P E T Y I L P S A K L F T K L I P R P L D G T D V D D A M F G G A F V A M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 359 End: 1147 ...................................................................................................................................................................................................................................................................................................................................................................... P T E V L S A D V L V G E R V S I H H R S L Q K N F Q A L L K D M L G L E T L A S R F R S I T S H D P S V E E M A G L M ......................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 148 End: 342 ................................................................................................................................................... W S G R S L D K Q D P F Y W Q S V K A F Y P P P P F L L E Q C F L L S H F P H C Y P T F T T T F G G K L L Q K C S S R M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 3 End: 224 .. H R S G R R K G R R K E C T D I P L V A M G D P P F F R S F P R N S V K G V T G L A V R C I K K T P F I G N H S R Q L M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 2 End: 352 . A V S R K P R S F V M T L G K C F L S T S P L P T R P L F P A L S L P P L L S H F Y N Y I G G Q P A A Q V L E E L P T M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 100 HP_score: -17.0 Tail_Score: -3.37057 Start: 28 End: 60 Full_Region: acgtagaggtaaaag aagggggagccggc acgtg gtcggctccccctc ttcgtatgtgtgtgt ...........................aagggggagccggcacgtggtcggctccccctc........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 100 HP_score: -14.6 Tail_Score: -4.24606 Start: 28 End: 61 Full_Region: ACACACACATACGAA GAGGGGGAGCCGAC CACGT GCCGGCTCCCCCTTC TTTTACCTCTACGTT ...........................GAGGGGGAGCCGACCACGTGCCGGCTCCCCCTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -19.6 Tail_Score: -3.24637 Start: 30 End: 58 Full_Region: gtagaggtaaaagaa gggggagccggc acgtg gtcggctccccc tcttcgtatgtgtgt .............................gggggagccggcacgtggtcggctccccc.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -19.3 Tail_Score: -3.6003 Start: 307 End: 349 Full_Region: gtaggataaggcata accccccttgaggagctcgt gcaa gcagctcctcaagggggga tttacaactactttc ..................................................................................................................................................................................................................................................................................................................accccccttgaggagctcgtgcaagcagctcctcaagggggga....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -22.8 Tail_Score: -3.45768 Start: 308 End: 348 Full_Region: AAAGTAGTTGTAAAT CCCCCCTTGAGGAGCT GCTTGCACG AGCTCCTCAAGGGGGG TTATGCCTTATCCTA ...................................................................................................................................................................................................................................................................................................................CCCCCCTTGAGGAGCTGCTTGCACGAGCTCCTCAAGGGGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: - Conf: 100 HP_score: -22.8 Tail_Score: -2.75536 Start: 308 End: 348 Full_Region: taggataaggcataa ccccccttgaggagctcgt gcaa gcagctcctcaagggggg atttacaactacttt ...................................................................................................................................................................................................................................................................................................................ccccccttgaggagctcgtgcaagcagctcctcaagggggg........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 42 HP_score: -3.4 Tail_Score: -2.60808 Start: 563 End: 580 Full_Region: CTTCTCTTCCTCGGT CAATGC CCTGTT GCGTTG TGCCTTGTGCATGAT ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCCCTGTTGCGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Find igs database================================================ Query_seq: PG1226:PG1229|PG1226:PG1229:peptidyl-prolyl cis-trans isomerase, cyclophilin-type:hypothetical protein:-><-:1304109..1305648 1540 gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn Intra-Species Hit: Count: 1 Min: 1 Max: 208 Len: 208 Subject: NC_002950_PG1226_PG1229|peptidyl-prolyl cis-trans isomerase, cyclophilin-type:hypothetical protein|POSITIVE:NEGATIVE|[1304109,1305648]|1540 HSP 1 e-value: 1.0E-101 bit: 371.0 Len: 208 Query Start:1 Query End:208 Subject Strand: POSITIVE Subject Start: 1 Subject End: 208 gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggnnnnnnncgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgt.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... gaccactgccgaacacacacatacgaagagggggagccgaccacgtgccggctcccccttcttttacctctacgtttttcacacgtatcaatcgggagaacagccatgccatcgggaggaaaaaaacgggagaaaggccggttgctaacctttccgaccgttccaagagccacgcgacagatctttttggtcgggaaaataccattgt.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GACCACUGCCGAACACACACAUACGAAGAGGGGGAGCCGACCACGUGCCGGCUCCCCCUUCUUUUACCUCUACGUUUUUCACACGUAUCAAUCGGGAGAACAGCCAUGCCAUCGGGAGGAAAAAAACGGGAGAAAGGCCGGUUGCUAACCUUUCCGACCGUUCCAAGAGCCACGCGACAGAUCUUUUUGGUCGGGAAAAUACCAUUGU .....((.((((............(((((((((((((((.........)))))))))).)))))......(((((.......)))))....)))).))..(((((..(((.((....)).......(....)...))).)))))......((((((((((....((((..(........).))))..))))))))))........... (-64.20) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ ACAAUGGUAUUUUCCCGACCAAAAAGAUCUGUCGCGUGGCUCUUGGAACGGUCGGAAAGGUUAGCAACCGGCCUUUCUCCCGUUUUUUUCCUCCCGAUGGCAUGGCUGUUCUCCCGAUUGAUACGUGUGAAAAACGUAGAGGUAAAAGAAGGGGGAGCCGGCACGUGGUCGGCUCCCCCUCUUCGUAUGUGUGUGUUCGGCAGUGGUC ................(((((........(((((((.((.....(((((((..((((((((..(...)..)))))))).)))))))......)))).)))))..((((..(.....(((..(((((.......)))))..)))..((((.((((((((((((.....))))))))))))))))...........)..))))..))))) (-73.50) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 460 118 76 219 179 NC_002950:PG0126|5end_type_I_phosphodiesterase/nucleotide_pyrophosphatase_family_protein_148018..148248_NEGATIVE 410 77 31 221 169 NC_002950:PG0333|5end_hypothetical_protein_367823..368053_POSITIVE 408 180 131 64 8 NC_002950:PG1091|5end_DHH_subfamily_1_protein_1157017..1157247_POSITIVE 406 68 24 215 143 NC_002950:PG0489|5end_polysaccharide_biosynthesis-related_protein_529247..529477_POSITIVE 401 68 24 186 144 NC_002950:PG1479|5end_conjugative_transposon_protein_TraJ_1555234..1555464_NEGATIVE 397 80 31 210 165 NC_002950:PG1481|5end_conjugative_transposon_protein_TraG_1558447..1558677_NEGATIVE 397 70 24 49 3 NC_002950:PG0718|5end_hypothetical_protein_771573..771803_NEGATIVE 394 180 138 49 3 NC_002950:PG0441|5end_hypothetical_protein_478734..478964_POSITIVE 377 195 151 189 148 NC_002950:PG1562|5end_dTDP-4-dehydrorhamnose_3,5-epimerase_1641582..1641812_NEGATIVE 376 55 14 194 135 NC_002950:PG1499|5end_hypothetical_protein_1575524..1575754_POSITIVE 375 139 92 210 156 NC_002950:PG0756|5end_hypothetical_protein_805673..805903_NEGATIVE 372 70 24 160 118 NC_002950:PG0446|5end_thiF_protein_486599..486829_POSITIVE 371 49 3 212 156 NC_002950:PG2068|5end_glycerol-3-phosphate_cytidylyltransferase_2164334..2164564_POSITIVE 371 140 92 120 66 NC_002950:PG1487|5end_hypothetical_protein_1561468..1561698_POSITIVE 368 55 24 175 136 NC_002950:PG1964|5end_bacterial_sugar_transferase_2052910..2053140_POSITIVE 368 179 132 108 50 NC_002950:PG1760|5end_ABC_transporter,_ATP-binding_protein_1846507..1846737_POSITIVE 367 57 25 49 2 NC_002950:PG2000|5end_signal_peptidase-related_protein_2089468..2089698_NEGATIVE 365 67 24 171 117 NC_002950:PG0094|5end_outer_membrane_efflux_protein,_putative_111193..111423_NEGATIVE 363 56 24 209 165 NC_002950:PG1709|5end_ISPg5,_transposase_Orf1_1794914..1795144_POSITIVE 363 116 74 152 104 NC_002950:PG0423|5end_hypothetical_protein_462251..462481_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 816 69 25 72 28 NC_002950:PG1630|3end_hypothetical_protein_1712142..1712292_POSITIVE 590 63 25 65 30 NC_002950:PG1226|3end_peptidyl-prolyl_cis-trans_isomerase,_cyclophilin-type_1304048..1304198_POSITIVE 398 57 24 147 112 NC_002950:PG1480|3end_conjugative_transposon_protein_TraI_1555266..1555416_NEGATIVE 389 70 24 75 31 NC_002950:PG1797|3end_DNA-binding_response_regulator/sensor_histidine_kinase_1892978..1893128_POSITIVE 384 65 23 79 23 NC_002950:PG1472|3end_hypothetical_protein_1549760..1549910_POSITIVE 377 70 24 135 65 NC_002950:PG0021|3end_TIM-barrel_protein,_putative,_NifR3_family_24122..24272_NEGATIVE 372 179 136 82 35 NC_002950:PG0507|3end_hypothetical_protein_548190..548340_POSITIVE 369 57 19 59 7 NC_002950:PG2001|3end_signal_peptidase_I_2089458..2089608_NEGATIVE 368 179 132 118 60 NC_002950:PG1759|3end_adhesion_protein,_putative_1846597..1846747_POSITIVE 366 69 23 77 21 NC_002950:PG1004|3end_prolyl_oligopeptidase_family_protein_1060433..1060583_NEGATIVE 366 50 3 45 6 NC_002950:PG0340|3end_hypothetical_protein_376436..376586_POSITIVE 365 49 3 108 45 NC_002950:PG1273|3end_hypothetical_protein_1351682..1351832_NEGATIVE 363 179 136 71 19 NC_002950:PG0790|3end_GTP-binding_protein_Obg_841399..841549_NEGATIVE 362 62 24 79 46 NC_002950:PG0143|3end_hydrolase,_carbon-nitrogen_family_165747..165897_NEGATIVE 360 64 21 92 40 NC_002950:PG0725|3end_hydrolase,_haloacid_dehalogenase-like_family_777966..778116_POSITIVE 358 61 24 117 79 NC_002950:PG2036|3end_ion_transporter_2137552..2137702_POSITIVE 357 70 23 86 24 NC_002950:PG0322|3end_serine/threonine_transporter_356966..357116_POSITIVE 356 66 25 64 14 NC_002950:PG1949|3end_malate_dehydrogenase_2038184..2038334_NEGATIVE 349 57 18 40 3 NC_002950:PG0404|3end_hypothetical_protein_439768..439918_NEGATIVE 349 60 17 113 50 NC_002950:PG0157|3end_regulatory_protein_RecX_180271..180421_POSITIVE