Origin IGS: ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 agggtcggttgggaatacccttagttagaagggtggagacaactcccatttttgagccaaatctgatacaaatgttgggaatacccttagttagaagggtggagacaactacaacatctttagtaatttctttagtaatgttgggaatacccttagttagaagggtggagacaacgttgtcccaagcctgaacggtagcgttgtcgttgggaatacccttagttagaagggtggagacaacaaacgcatcgttataagtttttgtgattgcgttgggaatacccttagttagaagggtggagacaacgttgtcccaagcctgaacggtagcgttgtcgttgggaatacccttagttagaagggtggagacaacaaacgcatcgttataagtttttgtgattgcgttgggaatacccttagttagaagggtggagacaacaccttttcttccacatcctcaggagcaggagttgggaatacccttagttagaagggtggagacaactattattccgaaaggagaaagaggggaggttgtgctattgatggggaagtattcctaaattagcgattgctaaagtgatggaagatggataggaggatcgtgttcggaggagagggctgtagccgacagtgtttgtgtgcagctatccattcgatcgggaggcctttcgttctcttccttggcttttgtctgtaaatctcgattcttttaactcatataa Mask Tandem Repeat Region ================================================ ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgaccct Find is-nt database================================================ Query_seq: PG1163:PG1164|PG1163:PG1164:cobyrinic acid a,c-diamide synthase:hypothetical protein:<-<-:1243472..1244196 725 ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG1163:PG1164|PG1163:PG1164:cobyrinic acid a,c-diamide synthase:hypothetical protein:<-<-:1243472..1244196 725 ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG1163:PG1164|PG1163:PG1164:cobyrinic acid a,c-diamide synthase:hypothetical protein:<-<-:1243472..1244196 725 ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Predict ORF larger than 30AA ================================================ Protein_Len: 47 Strand: + Start: 18 End: 158 ................. M E I Y R Q K P R K R T K G L P I E W I A A H K H C R L Q P S P P N T I L L S I F H H F S N R ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: + Start: 79 End: 183 .............................................................................. M H T N T V G Y S P L L R T R S S Y P S S I T L A I A N L G I L P H Q .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 314 End: 724 ......................................................................................................................................................................................................................................................................................................................... M P N A I T K T Y N D A F V V S T L L T K G I P N D N A T V Q A W D N V V S T L L T K G I P N A I T K T Y N D A F V V S . Protein_Len: 60 Strand: - Start: 538 End: 717 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... A Q S L T T E V R R V L P I G L M V L S I V L S T T T T E V R R V L P I G L M Q I L N P E F I P T T E V R R V L P I G M ........ Protein_Len: 55 Strand: - Start: 166 End: 330 ..................................................................................................................................................................... S Y K G M L L V V E G R E G K P I I T T E V R R V L P I G L E Q E Q P H P L F P T T E V R R V L P I G L A I M ........................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 36 Strand: - Start: 29 End: 136 ............................ L C F G L F L V F P R G I S H I A A C L C Q R S C G E G G F V I R R D M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 40 Strand: - Start: 13 End: 132 ............ F F R S K C V F A L S S F S L G G S R I S L Q V C V S D A V A R E E S C S G G M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 30 Strand: - Start: 3 End: 92 .. Y S N F S D L N V S L L W P L S R F A E R D F P Y S C V F M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: PG1163:PG1164|PG1163:PG1164:cobyrinic acid a,c-diamide synthase:hypothetical protein:<-<-:1243472..1244196 725 ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Intra-Species Hit: Count: 1 Min: 1 Max: 725 Len: 725 Subject: NC_002950_PG1163_PG1164|cobyrinic acid a,c-diamide synthase:hypothetical protein|NEGATIVE:NEGATIVE|[1243472,1244196]|725 HSP 1 e-value: 0.0 bit: 1437.0 Len: 725 Query Start:1 Query End:725 Subject Strand: POSITIVE Subject Start: 1 Subject End: 725 ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct ttatatgagttaaaagaatcgagatttacagacaaaagccaaggaagagaacgaaaggcctcccgatcgaatggatagctgcacacaaacactgtcggctacagccctctcctccgaacacgatcctcctatccatcttccatcactttagcaatcgctaatttaggaatacttccccatcaatagcacaacctcccctctttctcctttcggaataatagttgtctccacccttctaactaagggtattcccaactcctgctcctgaggatgtggaagaaaaggtgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacgcaatcacaaaaacttataacgatgcgtttgttgtctccacccttctaactaagggtattcccaacgacaacgctaccgttcaggcttgggacaacgttgtctccacccttctaactaagggtattcccaacattactaaagaaattactaaagatgttgtagttgtctccacccttctaactaagggtattcccaacatttgtatcagatttggctcaaaaatgggagttgtctccacccttctaactaagggtattcccaaccgaccct Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUAUAUGAGUUAAAAGAAUCGAGAUUUACAGACAAAAGCCAAGGAAGAGAACGAAAGGCCUCCCGAUCGAAUGGAUAGCUGCACACAAACACUGUCGGCUACAGCCCUCUCCUCCGAACACGAUCCUCCUAUCCAUCUUCCAUCACUUUAGCAAUCGCUAAUUUAGGAAUACUUCCCCAUCAAUAGCACAACCUCCCCUCUUUCUCCUUUCGGAAUAAUAGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACUCCUGCUCCUGAGGAUGUGGAAGAAAAGGUGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACGCAAUCACAAAAACUUAUAACGAUGCGUUUGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACGACAACGCUACCGUUCAGGCUUGGGACAACGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACGCAAUCACAAAAACUUAUAACGAUGCGUUUGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACGACAACGCUACCGUUCAGGCUUGGGACAACGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACAUUACUAAAGAAAUUACUAAAGAUGUUGUAGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACAUUUGUAUCAGAUUUGGCUCAAAAAUGGGAGUUGUCUCCACCCUUCUAACUAAGGGUAUUCCCAACCGACCCU .....(((((((((........((((...((((((..(((.((((.(((..(....)..)))..(((((...((.((((((.(((.......)))))))))...)).((......))...))))).)))).....((((((((....(((((....)))))....(((.....)))............................(((((..(((.((..(((((.....((((((......)))))).....)))))..)).))).))))).))))))))...))).))))))..((((((......))))))...........))))...............((((((..(((((.....((((((......((((((.....((((.((((((((...(((.(((..(((((((((((((((.(((.(((.........(((....))).....................((((..((((((((((.....((((((......)))))).....))))))..))))...)))).)))..))))))))))))))).))).)))...)))...(((....))).......................)).)))))).)))).....))))))......)))))).....)))))..))))))...)))))))))....(((((((.......((((((......)))))))))))))......... (-200.31) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AGGGUCGGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACUCCCAUUUUUGAGCCAAAUCUGAUACAAAUGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACUACAACAUCUUUAGUAAUUUCUUUAGUAAUGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACGUUGUCCCAAGCCUGAACGGUAGCGUUGUCGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACAAACGCAUCGUUAUAAGUUUUUGUGAUUGCGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACGUUGUCCCAAGCCUGAACGGUAGCGUUGUCGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACAAACGCAUCGUUAUAAGUUUUUGUGAUUGCGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACACCUUUUCUUCCACAUCCUCAGGAGCAGGAGUUGGGAAUACCCUUAGUUAGAAGGGUGGAGACAACUAUUAUUCCGAAAGGAGAAAGAGGGGAGGUUGUGCUAUUGAUGGGGAAGUAUUCCUAAAUUAGCGAUUGCUAAAGUGAUGGAAGAUGGAUAGGAGGAUCGUGUUCGGAGGAGAGGGCUGUAGCCGACAGUGUUUGUGUGCAGCUAUCCAUUCGAUCGGGAGGCCUUUCGUUCUCUUCCUUGGCUUUUGUCUGUAAAUCUCGAUUCUUUUAACUCAUAUAA .((.((((.(((((..((((((......))))))(....)...)))))...)))).))..................(((....)))..((((((((((((.((((....(((..((.(((((((((((((..(((((..((((....(((((((......(((((((....((((((.(((.((((.((.((((((.(((((...((((....(((((((......(((((((....((((.(((((((((((...((..((((.(((.((((((....(((((((......)))))))....)))))).))).)))).)).)))))).)))))...))))....)))))))......)))))))....)))).)))))))))))...))..)))).))).))))))....)))))))......)))))))....)))).((((..(((.....((((..((((....(((((....(((((((......)))))))....)))))....))))...))))....)))..))))...)))))..))((((((....)))))).......)))))))))))))..((((((.((((..((((.((.((.((((((((...(((((((..(((......)))..))))))).))).))))).)).))..))))..))))))))))..(((....))).)))..)))).))))))))))))....... (-265.40) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1081 130 81 221 172 NC_002950:PG1163|5end_cobyrinic_acid_a,c-diamide_synthase_1243381..1243611_NEGATIVE 423 73 39 173 134 NC_002950:PG0882|5end_hypothetical_protein_944195..944425_POSITIVE 393 138 94 211 167 NC_002950:PG0365|5end_3'-5'_exonuclease_domain_protein_400178..400408_NEGATIVE 382 138 96 93 43 NC_002950:PG0268|5end_tRNA_(5-methylaminomethyl-2-thiouridylate)-methyltransferase_300898..301128_POSITIVE 380 136 92 197 160 NC_002950:PG0399|5end_lipoprotein,_putative_436237..436467_NEGATIVE 372 140 91 62 12 NC_002950:PG0362|5end_hypothetical_protein_395301..395531_POSITIVE 364 140 94 228 169 NC_002950:PG1095|5end_RNA_methyltransferase,_TrmA_family_1160225..1160455_POSITIVE 364 300 251 213 158 NC_002950:PG0125|5end_hypothetical_protein_146786..147016_NEGATIVE 363 77 38 188 128 NC_002950:PG0384|5end_MutS2_family_protein_416095..416325_POSITIVE 354 429 384 76 31 NC_002950:PG1444|5end_hypothetical_protein_1528746..1528976_POSITIVE 351 426 383 64 24 NC_002950:PG0223|5end_exonuclease_257610..257840_NEGATIVE 350 137 94 211 147 NC_002950:PG0987|5end_hypothetical_protein_1048002..1048232_POSITIVE 347 117 71 175 140 NC_002950:PG0525|5end_CTP_synthetase_568999..569229_POSITIVE 345 120 79 198 145 NC_002950:PG1594|5end_ComEC/Rec2-related_protein_1673587..1673817_NEGATIVE 341 428 381 80 31 NC_002950:PG1100|5end_hypothetical_protein_1169012..1169242_NEGATIVE 341 424 383 110 69 NC_002950:PG0605|5end_hypothetical_protein_662406..662636_NEGATIVE 338 99 58 46 1 NC_002950:PG1103|5end_ATPase,_AAA_family_1173605..1173835_POSITIVE 336 416 375 51 15 NC_002950:PG1572|5end_hypothetical_protein_1651252..1651482_NEGATIVE 334 80 38 116 79 NC_002950:PG1029|5end_hypothetical_protein_1091080..1091310_POSITIVE 332 230 181 72 16 NC_002950:PG1252|5end_hypothetical_protein_1329584..1329814_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 423 73 39 63 24 NC_002950:PG0881|3end_recombinase_A_944165..944315_POSITIVE 393 138 94 134 90 NC_002950:PG0366|3end_hypothetical_protein_400255..400405_NEGATIVE 382 138 96 88 38 NC_002950:PG0267|3end_arginyl-tRNA_synthetase_300973..301123_POSITIVE 364 140 94 144 85 NC_002950:PG1094|3end_phosphomannomutase_1160221..1160371_POSITIVE 352 300 251 115 52 NC_002950:PG2040|3end_DNA-binding_protein,_histone-like_family_2138398..2138548_NEGATIVE 351 426 383 60 20 NC_002950:PG0224|3end_hypothetical_protein_257614..257764_NEGATIVE 348 79 38 150 95 NC_002950:PG0349|3end_hydrolase,_haloacid_dehalogenase-like_family_385291..385441_POSITIVE 348 300 256 77 32 NC_002950:PG0143|3end_hydrolase,_carbon-nitrogen_family_165747..165897_NEGATIVE 347 117 71 59 24 NC_002950:PG0524|3end_hypothetical_protein_568963..569113_POSITIVE 342 110 61 130 85 NC_002950:PG1315|3end_peptidyl-prolyl_cis-trans_isomerase_SlyD,_FKBP-type_1395618..1395768_NEGATIVE 342 137 92 132 74 NC_002950:PG0210|3end_precorrin-6x_reductase/cobalamin_biosynthetic_protein_CbiD_244161..244311_NEGATIVE 341 428 381 83 34 NC_002950:PG1101|3end_sodium:solute_symporter_family_protein_1169009..1169159_NEGATIVE 341 424 383 65 24 NC_002950:PG0606|3end_hypothetical_protein_662451..662601_NEGATIVE 339 130 100 134 94 NC_002950:PG1980|3end_hypothetical_protein_2067760..2067910_NEGATIVE 338 160 115 81 29 NC_002950:PG1649|3end_hypothetical_protein_1730030..1730180_NEGATIVE 334 80 38 52 15 NC_002950:PG1028|3end_TPR_domain_protein_1091096..1091246_POSITIVE 334 95 52 94 43 NC_002950:PG0507|3end_hypothetical_protein_548190..548340_POSITIVE 332 230 181 59 3 NC_002950:PG1253|3end_DNA_ligase,_NAD-dependent_1329597..1329747_NEGATIVE 331 110 61 91 32 NC_002950:PG2004|3end_hypothetical_protein_2093135..2093285_NEGATIVE 329 137 95 129 86 NC_002950:PG1276|3end_DNA-binding_protein,_histone-like_family_1353531..1353681_POSITIVE