Origin IGS: ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcctcttcaccggcaaattccatcagataagccttgataaattcatctatgtcgccatccataacggcattgacattgctcgtctgatagttggtacgatggtctttcacacggcgatcatcgaatacatagctccgaatctgcgatccccactctatctttttcttgccggcctccactttggcctctgcagctcgtcggcgctgtagctccatctcatagagctgtgagcggagcagtcgcatagcattttcgcggttatcgtactgggtacggctctccgtattctcgatcacgatttctttatcctctcccgtttcaggatccttgtacttgtagtgcagtcggactcccgtctctaccttattaacgttctgtccacctgctccacctgagcggaaagtgtcccagctgataccggcagcattgatctcgatctcgatcgaatcgtccaccagcggcacaacgaatacagaggcgaacgatgtcatacgtttaccttgtgcattatagggagagacgcgaacgagtctgtgtaccccattctcgctcttgagaaatccgtaggccaaattgccttccacctgcatcgtcacagtcttaatacctgcttcgtctccatcctgccagttggttatcgtcacttgatacccctgcttgtccgcccaacgctgatacatacgcaccagcatggaggcccagtcttggctctcggttcctcctgcaccggcattcactttgagcacggcaccgaagtgatcctcttcggatcggagcatattcttcagctccacctcttctatcagccggatggcatgagcataggcttcatccacctcctcttcggtggatataccctccttgcagtattcataagcgagcttcacctcctcggcagctgtgtcgatggcatcgtagtagcctatccagctcttcagctctttcaccttgcgcatctgtgcctcggcacgcttattgtcctcccagaaggcaggatcctgtgtgcgcagttcttcctcttctaattggatacgtctgttattgacgtcaaagataccccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 gcctcgttttccaatgtactgtcccggaagcatacggagtgcacttgggcacagtgtttttttcggcagatgttattcggccaccgaacgaagcaaaaactaacaaaactcatataatcatcgatgattactatagaccaactgaattctctgttggagcgccgtgatgcgctgagggggtatctttgacgtcaataacagacgtatccaattagaagaggaagaactgcgcacacaggatcctgccttctgggaggacaataagcgtgccgaggcacagatgcgcaaggtgaaagagctgaagagctggataggctactacgatgccatcgacacagctgccgaggaggtgaagctcgcttatgaatactgcaaggagggtatatccaccgaagaggaggtggatgaagcctatgctcatgccatccggctgatagaagaggtggagctgaagaatatgctccgatccgaagaggatcacttcggtgccgtgctcaaagtgaatgccggtgcaggaggaaccgagagccaagactgggcctccatgctggtgcgtatgtatcagcgttgggcggacaagcaggggtatcaagtgacgataaccaactggcaggatggagacgaagcaggtattaagactgtgacgatgcaggtggaaggcaatttggcctacggatttctcaagagcgagaatggggtacacagactcgttcgcgtctctccctataatgcacaaggtaaacgtatgacatcgttcgcctctgtattcgttgtgccgctggtggacgattcgatcgagatcgagatcaatgctgccggtatcagctgggacactttccgctcaggtggagcaggtggacagaacgttaataaggtagagacgggagtccgactgcactacaagtacaaggatcctgaaacgggagaggataaagaaatcgtgatcgagaatacggagagccgtacccagtacgataaccgcgaaaatgctatgcgactgctccgctcacagctctatgagatggagctacagcgccgacgagctgcagaggccaaagtggaggccggcaagaaaaagatagagtggggatcgcagattcggagctatgtattcgatgatcgccgtgtgaaagaccatcgtaccaactatcagacgagcaatgtcaatgccgttatggatggcgacatagatgaatttatcaaggcttatctgatggaatttgccggtgaagaggcgtaatcgactttcgcttctgaaggaagggattcgttgatcaaaggaa Mask Tandem Repeat Region ================================================ ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcctcttcaccggcaaattccatcagataagccttgataaattcatctatgtcgccatccataacggcattgacattgctcgtctgatagttggtacgatggtctttcacacggcgatcatcgaatacatagctccgaatctgcgatccccactctatctttttcttgccggcctccactttggcctctgcagctcgtcggcgctgtagctccatctcatagagctgtgagcggagcagtcgcatagcattttcgcggttatcgtactgggtacggctctccgtattctcgatcacgatttctttatcctctcccgtttcaggatccttgtacttgtagtgcagtcggactcccgtctctaccttattaacgttctgtccacctgctccacctgagcggaaagtgtcccagctgataccggcagcattgatctcgatctcgatcgaatcgtccaccagcggcacaacgaatacagaggcgaacgatgtcatacgtttaccttgtgcattatagggagagacgcgaacgagtctgtgtaccccattctcgctcttgagaaatccgtaggccaaattgccttccacctgcatcgtcacagtcttaatacctgcttcgtctccatcctgccagttggttatcgtcacttgatacccctgcttgtccgcccaacgctgatacatacgcaccagcatggaggcccagtcttggctctcggttcctcctgcaccggcattcactttgagcacggcaccgaagtgatcctcttcggatcggagcatattcttcagctccacctcttctatcagccggatggcatgagcataggcttcatccacctcctcttcggtggatataccctccttgcagtattcataagcgagcttcacctcctcggcagctgtgtcgatggcatcgtagtagcctatccagctcttcagctctttcaccttgcgcatctgtgcctcggcacgcttattgtcctcccagaaggcaggatcctgtgtgcgcagttcttcctcttctaattggatacgtctgttattgacgtcaaagataccccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Find is-nt database================================================ Query_seq: PG1143:PG1145|PG1143:PG1145:sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family:long-chain-fatty-acid--CoA ligase, putative:<-<-:1227289..1228571 1283 ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcctcttcaccggcaaattccatcagataagccttgataaattcatctatgtcgccatccataacggcattgacattgctcgtctgatagttggtacgatggtctttcacacggcgatcatcgaatacatagctccgaatctgcgatccccactctatctttttcttgccggcctccactttggcctctgcagctcgtcggcgctgtagctccatctcatagagctgtgagcggagcagtcgcatagcattttcgcggttatcgtactgggtacggctctccgtattctcgatcacgatttctttatcctctcccgtttcaggatccttgtacttgtagtgcagtcggactcccgtctctaccttattaacgttctgtccacctgctccacctgagcggaaagtgtcccagctgataccggcagcattgatctcgatctcgatcgaatcgtccaccagcggcacaacgaatacagaggcgaacgatgtcatacgtttaccttgtgcattatagggagagacgcgaacgagtctgtgtaccccattctcgctcttgagaaatccgtaggccaaattgccttccacctgcatcgtcacagtcttaatacctgcttcgtctccatcctgccagttggttatcgtcacttgatacccctgcttgtccgcccaacgctgatacatacgcaccagcatggaggcccagtcttggctctcggttcctcctgcaccggcattcactttgagcacggcaccgaagtgatcctcttcggatcggagcatattcttcagctccacctcttctatcagccggatggcatgagcataggcttcatccacctcctcttcggtggatataccctccttgcagtattcataagcgagcttcacctcctcggcagctgtgtcgatggcatcgtagtagcctatccagctcttcagctctttcaccttgcgcatctgtgcctcggcacgcttattgtcctcccagaaggcaggatcctgtgtgcgcagttcttcctcttctaattggatacgtctgttattgacgtcaaagataccccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG1143:PG1145|PG1143:PG1145:sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family:long-chain-fatty-acid--CoA ligase, putative:<-<-:1227289..1228571 1283 ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcctcttcaccggcaaattccatcagataagccttgataaattcatctatgtcgccatccataacggcattgacattgctcgtctgatagttggtacgatggtctttcacacggcgatcatcgaatacatagctccgaatctgcgatccccactctatctttttcttgccggcctccactttggcctctgcagctcgtcggcgctgtagctccatctcatagagctgtgagcggagcagtcgcatagcattttcgcggttatcgtactgggtacggctctccgtattctcgatcacgatttctttatcctctcccgtttcaggatccttgtacttgtagtgcagtcggactcccgtctctaccttattaacgttctgtccacctgctccacctgagcggaaagtgtcccagctgataccggcagcattgatctcgatctcgatcgaatcgtccaccagcggcacaacgaatacagaggcgaacgatgtcatacgtttaccttgtgcattatagggagagacgcgaacgagtctgtgtaccccattctcgctcttgagaaatccgtaggccaaattgccttccacctgcatcgtcacagtcttaatacctgcttcgtctccatcctgccagttggttatcgtcacttgatacccctgcttgtccgcccaacgctgatacatacgcaccagcatggaggcccagtcttggctctcggttcctcctgcaccggcattcactttgagcacggcaccgaagtgatcctcttcggatcggagcatattcttcagctccacctcttctatcagccggatggcatgagcataggcttcatccacctcctcttcggtggatataccctccttgcagtattcataagcgagcttcacctcctcggcagctgtgtcgatggcatcgtagtagcctatccagctcttcagctctttcaccttgcgcatctgtgcctcggcacgcttattgtcctcccagaaggcaggatcctgtgtgcgcagttcttcctcttctaattggatacgtctgttattgacgtcaaagataccccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 2 Min: 50 Max: 1105 Len: 1056 Subject: gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli W3110] HSP 1 e-value: 1.0E-69 bit: 260.0 Len: 1035 Query Start:71 Query End:1105 Subject Strand: null Subject Start: 23 Subject End: 361 ...................................................................... G I F D V N N R R I Q L E E E E L R T Q D P A F W E D N K R A E A Q M R K V K E L K S W I G Y Y D A I D T A A E E V K L A Y E Y C K E G I S T E E E V D E A Y A H A I R L I E - - - E V E L K N M L R S E E D H F G A V L K V N A G A G G T E S Q D W A S M L V R M Y Q R W A D K Q G Y Q V T I T N W Q D G D E A G I K T V T M Q V E G N L A Y G F L K S E N G V H R L V R V S P Y N A Q G K R M T S F A S V F V V P L V D D S I E I E I N A A G I S W D T F R S G G A G G Q N V N K V E T G V R L H Y K Y K D P E T G E D K E I V I E N T E S R T Q Y D N R E N A M R L L R S Q L Y E M E L Q X X X X X X X X X X X X X X X X E W G S Q I R S Y V F D D R R V K D H R T N Y Q T S N V N A V M D G D I D E F I K A Y L .................................................................................................................................................................................. ...................................................................... G Y L D Y D A K K E R L E E V N A E L E Q P D V W N E P E R A Q A L G K E R S S L E A V V D T L D Q M K Q G L E D V S G L L E L A V E A - D D E E T F N E A V A E L D A L E E K L A Q L E F R R M F S G E Y D S A D C Y L D I Q A G S G G T E A Q D W A S M L E R M Y L R W A E S R G F K T E I I E E S E G E V A G I K S V T I K I S G D Y A Y G W L R T E T G V H R L V R K S P F D S G G R R H T S F S S A F V Y P E V D D D I D I E I N P A D L R I D V Y R T S G A G G Q H V N R T E S A V R I - - - - - - - - T H I P T G I V T Q C Q N D R S Q H K N K D Q A M K Q M K A K L Y E L E M Q K K N A E K Q A M E D N K S D I G W G S Q I R S Y V L D D S R I K D L R T G V E T R N T Q A V L D G S L D Q F I E A S L .................................................................................................................................................................................. Subject: gi|89108056|ref|AP_001836.1| peptide chain release factor RF-1 [Escherichia coli W3110] HSP 1 e-value: 2.0E-33 bit: 140.0 Len: 1020 Query Start:50 Query End:1069 Subject Strand: null Subject Start: 17 Subject End: 352 ................................................. E E E E L R T Q D P A F W E D N K R A E A Q M R K V K E L K S W I G Y Y D A I D T A A E E V K L A Y E Y C K E G I S T E - - - E E V D E A Y A H A I R L I E E V E L K N M L R S E E D H F G A V L K V N A G A G G T E S Q D W A S M L V R M Y Q R W A D K Q G Y Q V T I T N W Q D G D E A G I K T V T M Q V E G N L A Y G F L K S E N G V H R L V R V S P Y N A Q G K R M T S F A S V F V V P L V D D S I E I E I N A A G I S W D T F R S G G A G G Q N V N K V E T G V R L H Y K Y K D P E T G E D K E I V I E N T E S R T Q Y D N R E N A M R L L R S Q L Y E M E L - Q X X X X X X X X X X X X X X X X E W G S Q I R S Y V F D D R R V K D H R T N Y Q T S N V N A V M D G D I D E F I K A Y L M E F A G E E ...................................................................................................................................................................................................................... ................................................. E E V Q A L L G D A Q T I A D Q E R F R A L S R E Y A Q L S D V S R C F T D W Q Q V Q E D I E T A Q M M L D D P E M R E M A Q D E L R E A K E K S E Q L E Q Q L Q V L L L P K D P D D E R N A F L E V R A G T G G D E A A L F A G D L F R M Y S R Y A E A R R W R V E I M S A S E G E H G G Y K E I I A K I S G D G V Y G R L K F E S G G H R V Q R V P A T E S Q G R I H T S A C T V A V M P E L P D A E L P D I N P A D L R I D T F R S S G A G G Q H V N T T D S A I R I T H L - - - - P T G - - - - I V V E C Q D E R S Q H K N K A K A L S V L G A R I H A A E M A K R Q Q A E A S T R R N L L G S G D R S D R N R T Y N F P Q G R V T D H R I N L T L Y R L D E V M E G K L D M L I E P I I Q E H Q A D Q ...................................................................................................................................................................................................................... Find nr database================================================ Query_seq: PG1143:PG1145|PG1143:PG1145:sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family:long-chain-fatty-acid--CoA ligase, putative:<-<-:1227289..1228571 1283 ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Predict ORF larger than 30AA ================================================ Protein_Len: 60 Strand: + Start: 17 End: 253 ................ M P S F R S E S R L R L F T G K F H Q I S L D K F I Y V A I H N G I D I A R L I V G T M V F H T A I I E Y I A P N L R S ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 40 Strand: + Start: 172 End: 291 ........................................................................................................................................................................... M H S S E S A I P T L S F S C R P P L W P L Q L V G A V A P S H R A V S G A V A ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 31 Strand: + Start: 291 End: 383 .................................................................................................................................................................................................................................................................................................. M A F S R L S Y W V R L S V F S I T I S L S S P V S G S L Y L .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 48 Strand: + Start: 296 End: 439 ....................................................................................................................................................................................................................................................................................................... M F A V I V L G T A L R I L D H D F F I L S R F R I L V L V V Q S D S R L Y L I N V L S T C S T ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 36 Strand: + Start: 450 End: 557 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M S Q L I P A A L I S I S I E S S T S G T T N T E A N D V I R L P C A L ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 44 Strand: + Start: 655 End: 786 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M L R L H P A S W L S S L D T P A C P P N A D T Y A P A W R P S L G S R F L L H R H S L ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 473 End: 1069 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M D L D L D R I V H Q R H N E Y R G E R C H T F T L C I I G R D A N E S V Y P I L A L E K S V G Q I A F H L H R H S L N ...................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 817 End: 1089 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M G A Y S S A P P L L S A G W H E H R L H P P P L R W I Y P P C S I H K R A S P P R Q L C R W H R S S L S S S S A L S P .................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 972 End: 1163 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q L F S S F T L R I C A S A R L L S S Q K A G S C V R S S S S S N W I R L L L T S K I P P Q R I T A L Q Q R I Q L V Y ........................................................................................................................ Protein_Len: 44 Strand: + Start: 1150 End: 1281 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M V I I D D Y M S F V S F C F V R W P N N I C R K K H C A Q V H S V C F R D S T L E N E .. Protein_Len: 35 Strand: + Start: 1178 End: 1282 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M L V F A S F G G R I T S A E K N T V P K C T P Y A S G T V H W K T R . Protein_Len: 32 Strand: - Start: 1170 End: 1265 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. I L K T L K Q K T R H G F L M Q R F F C Q A W T C E T H K R S M .................. Protein_Len: 42 Strand: - Start: 1120 End: 1245 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... P A G V S F E T P R Y Y D D I I I H T K N T K A E N P P R I V D A S F F V T G L H M ...................................... Protein_Len: 30 Strand: - Start: 691 End: 780 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. K I G R S T R G V S I C V C W C P P G T K A R P E E Q V P M ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 56 Strand: - Start: 651 End: 818 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Y R S R R W G A L Q N D D S S V G A Q G G L A S V Y A G A H L G L R P E R N R R C R C E S Q A R C R L S G R R M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 39 Strand: - Start: 417 End: 533 ................................................................................................................................................................................................................................................................................................................................................................................................................................ R E T W R S W R L P F H G L Q Y R C C Q D R D R D F R G G A A C R I C L R V M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 38 Strand: - Start: 409 End: 522 ........................................................................................................................................................................................................................................................................................................................................................................................................................ R I L T R D V Q E V Q A S L T G A S V P L M S R S R S R I T W W R C L S Y M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 43 Strand: - Start: 205 End: 333 ............................................................................................................................................................................................................ R K R A P R W K P R Q L E D A S Y S W R M S S H A S C D C L M K A T I T S P V A R R M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 47 End: 1102 .............................................. A L K V E E A A T D I A D Y Y G I W S K L E K V K R M Q A E A R K N D E W F A P D Q T R L E E E E L Q I R R N N V D F M ..................................................................................................................................................................................... ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 44 HP_score: -2.2 Tail_Score: -3.28712 Start: 33 End: 49 Full_Region: tttgccggtgaagag gcgtaa tcgac tttcgc ttctgaaggaaggga ................................gcgtaatcgactttcgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 41 HP_score: -3.1 Tail_Score: -2.82834 Start: 872 End: 905 Full_Region: tgaatactgcaagga gggtatatccacc gaagagga ggtggatgaagcc tatgctcatgccatc .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gggtatatccaccgaagaggaggtggatgaagcc.......................................................................................................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: PG1143:PG1145|PG1143:PG1145:sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family:long-chain-fatty-acid--CoA ligase, putative:<-<-:1227289..1228571 1283 ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc Intra-Species Hit: Count: 1 Min: 1 Max: 1283 Len: 1283 Subject: NC_002950_PG1143_PG1145|sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family:long-chain-fatty-acid--CoA ligase, putative|NEGATIVE:NEGATIVE|[1227289,1228571]|1283 HSP 1 e-value: 3.0E-83 bit: 311.0 Len: 178 Query Start:1106 Query End:1283 Subject Strand: POSITIVE Subject Start: 1106 Subject End: 1283 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgnnnnnnncactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ccctcagcgcatcacggcgctccaacagagaattcagttggtctatagtaatcatcgatgattatatgagttttgttagtttttgcttcgttcggtggccgaataacatctgccgaaaaaaacactgtgcccaagtgcactccgtatgcttccgggacagtacattggaaaacgaggc HSP 2 e-value: 9.0E-19 bit: 97.6 Len: 49 Query Start:1 Query End:49 Subject Strand: POSITIVE Subject Start: 1 Subject End: 49 ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ttcctttgatcaacgaatcccttccttcagaagcgaaagtcgattacgc.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUCCUUUGAUCAACGAAUCCCUUCCUUCAGAAGCGAAAGUCGAUUACGCCUCUUCACCGGCAAAUUCCAUCAGAUAAGCCUUGAUAAAUUCAUCUAUGUCGCCAUCCAUAACGGCAUUGACAUUGCUCGUCUGAUAGUUGGUACGAUGGUCUUUCACACGGCGAUCAUCGAAUACAUAGCUCCGAAUCUGCGAUCCCCACUCUAUCUUUUUCUUGCCGGCCUCCACUUUGGCCUCUGCAGCUCGUCGGCGCUGUAGCUCCAUCUCAUAGAGCUGUGAGCGGAGCAGUCGCAUAGCAUUUUCGCGGUUAUCGUACUGGGUACGGCUCUCCGUAUUCUCGAUCACGAUUUCUUUAUCCUCUCCCGUUUCAGGAUCCUUGUACUUGUAGUGCAGUCGGACUCCCGUCUCUACCUUAUUAACGUUCUGUCCACCUGCUCCACCUGAGCGGAAAGUGUCCCAGCUGAUACCGGCAGCAUUGAUCUCGAUCUCGAUCGAAUCGUCCACCAGCGGCACAACGAAUACAGAGGCGAACGAUGUCAUACGUUUACCUUGUGCAUUAUAGGGAGAGACGCGAACGAGUCUGUGUACCCCAUUCUCGCUCUUGAGAAAUCCGUAGGCCAAAUUGCCUUCCACCUGCAUCGUCACAGUCUUAAUACCUGCUUCGUCUCCAUCCUGCCAGUUGGUUAUCGUCACUUGAUACCCCUGCUUGUCCGCCCAACGCUGAUACAUACGCACCAGCAUGGAGGCCCAGUCUUGGCUCUCGGUUCCUCCUGCACCGGCAUUCACUUUGAGCACGGCACCGAAGUGAUCCUCUUCGGAUCGGAGCAUAUUCUUCAGCUCCACCUCUUCUAUCAGCCGGAUGGCAUGAGCAUAGGCUUCAUCCACCUCCUCUUCGGUGGAUAUACCCUCCUUGCAGUAUUCAUAAGCGAGCUUCACCUCCUCGGCAGCUGUGUCGAUGGCAUCGUAGUAGCCUAUCCAGCUCUUCAGCUCUUUCACCUUGCGCAUCUGUGCCUCGGCACGCUUAUUGUCCUCCCAGAAGGCAGGAUCCUGUGUGCGCAGUUCUUCCUCUUCUAAUUGGAUACGUCUGUUAUUGACGUCAAAGAUACCCCCUCAGCGCAUCACGGCGCUCCAACAGAGAAUUCAGUUGGUCUAUAGUAAUCAUCGAUGAUUAUAUGAGUUUUGUUAGUUUUUGCUUCGUUCGGUGGCCGAAUAACAUCUGCCGAAAAAAACACUGUGCCCAAGUGCACUCCGUAUGCUUCCGGGACAGUACAUUGGAAAACGAGGC ((((..((.....................((((((((((..(((.....(((...((((((.(((((.((((((..(((..(((.....)))...((((((((.........)))...))))).)))..)))))).(((((..((((((((...........)))))))).......(((.(((....((((..........(((((((........((((........)))).(((((((.(....).))))))).((((......(((((((.(((((((...((((((((((.........((.((((....((((((((....)))))))).)))).)).................(((....(((...........((..(((((..(((((((((((((((.((((((...((((.(((((..((((((.....))))))...(((.....((((.......))))...(((.(((((....))))))))...)))..).)))).))))..((((.(((..((((........))))..)))))))....))))))))))))).)...))))))))))))..))..((((((..((((......(.((((......)))).)...(((((.......(((((.......((((.(((..((((((.((.(((.((.(((((.....))))).))..))).)).........(((((((.....((....(((.(((((.(((((....)))...))..))))))))....)).........(((.......((((((.......))))))...(((((..........)))))..)))...))))))).)))))).))))))).)))))..(((((((........)))))))..........)))))..))))..)))))).....)))...)))..)))))).))))(((.........)))..))).))))..)))))))......((((((((..((((....)))).......(((((.((....)).))))).....))))))))................)))).(((((.......))))).))))))).........))))...))).))))))))...)))))..)))))).....(((((((....)))))))..)))....)))..)))))))))).(((((..(..(.....)..)..)))))......(((((.(((....(((.......)))....)))))))).))..))))........ (-384.91) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GCCUCGUUUUCCAAUGUACUGUCCCGGAAGCAUACGGAGUGCACUUGGGCACAGUGUUUUUUUCGGCAGAUGUUAUUCGGCCACCGAACGAAGCAAAAACUAACAAAACUCAUAUAAUCAUCGAUGAUUACUAUAGACCAACUGAAUUCUCUGUUGGAGCGCCGUGAUGCGCUGAGGGGGUAUCUUUGACGUCAAUAACAGACGUAUCCAAUUAGAAGAGGAAGAACUGCGCACACAGGAUCCUGCCUUCUGGGAGGACAAUAAGCGUGCCGAGGCACAGAUGCGCAAGGUGAAAGAGCUGAAGAGCUGGAUAGGCUACUACGAUGCCAUCGACACAGCUGCCGAGGAGGUGAAGCUCGCUUAUGAAUACUGCAAGGAGGGUAUAUCCACCGAAGAGGAGGUGGAUGAAGCCUAUGCUCAUGCCAUCCGGCUGAUAGAAGAGGUGGAGCUGAAGAAUAUGCUCCGAUCCGAAGAGGAUCACUUCGGUGCCGUGCUCAAAGUGAAUGCCGGUGCAGGAGGAACCGAGAGCCAAGACUGGGCCUCCAUGCUGGUGCGUAUGUAUCAGCGUUGGGCGGACAAGCAGGGGUAUCAAGUGACGAUAACCAACUGGCAGGAUGGAGACGAAGCAGGUAUUAAGACUGUGACGAUGCAGGUGGAAGGCAAUUUGGCCUACGGAUUUCUCAAGAGCGAGAAUGGGGUACACAGACUCGUUCGCGUCUCUCCCUAUAAUGCACAAGGUAAACGUAUGACAUCGUUCGCCUCUGUAUUCGUUGUGCCGCUGGUGGACGAUUCGAUCGAGAUCGAGAUCAAUGCUGCCGGUAUCAGCUGGGACACUUUCCGCUCAGGUGGAGCAGGUGGACAGAACGUUAAUAAGGUAGAGACGGGAGUCCGACUGCACUACAAGUACAAGGAUCCUGAAACGGGAGAGGAUAAAGAAAUCGUGAUCGAGAAUACGGAGAGCCGUACCCAGUACGAUAACCGCGAAAAUGCUAUGCGACUGCUCCGCUCACAGCUCUAUGAGAUGGAGCUACAGCGCCGACGAGCUGCAGAGGCCAAAGUGGAGGCCGGCAAGAAAAAGAUAGAGUGGGGAUCGCAGAUUCGGAGCUAUGUAUUCGAUGAUCGCCGUGUGAAAGACCAUCGUACCAACUAUCAGACGAGCAAUGUCAAUGCCGUUAUGGAUGGCGACAUAGAUGAAUUUAUCAAGGCUUAUCUGAUGGAAUUUGCCGGUGAAGAGGCGUAAUCGACUUUCGCUUCUGAAGGAAGGGAUUCGUUGAUCAAAGGAA (((((...........(((((((((((..((((.....))))..))))).))))))......(((((((((....((((((((((.......................(((...((((((....)))))).......(((((.((....)).))))).((((......)))).))).(.(((((....(((((.......))))).(((..(((((((((((....(((......)))..))))..)))))))..)))........((((....)))).))))).)..)))).....))))))..((..(((.(.((.((((..(((.((((.((((((((((.((..(((...(.((((((...............(((.(.((((((((........)))))))).).))).(((((.(((..((((.(..(..((((....(((((..........)))))(((((.....))))).)))).(..(((.((...........)))))..).(((((..((.((........)).)))))))..((((((((....)))))))).)..).))))...))).)))))..)))))))....)))..)))))))..((....))...............))))).))))))).)))).)).).)))..))....((.((((.((.(.((((..((.(((((((.((.(((.((((((.(((((((....(((((..(((..((((........))))..))).)))))((.((((((..((((((((.((((((((....))))).)))..((.(.(((((....))))).)))...))))).)))((((.((((.(((((....((((...........))))...))))).)))).))))..)))))).)).........))))))).........((((((........(((((....))))).....))))))...)))))).......(((((...((((((((..((((((((...)))))))).((((........))))....((((........))))...............)))))))).)))))......))))).))))))).))..))))).)).))))..))..........((((((((..(((.(((((...((((((...))))))))))).((((....))))...)))..)))))))).)))))))))....)))))...((((((..((.((((.....)))).))...))))))........ (-444.52) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1000 60 11 151 102 NC_002950:PG1143|5end_sugar_dehydrogenase,_UDP-glucose/GDP-mannose_dehydrogenase_family_1227198..1227428_NEGATIVE 556 290 246 58 17 NC_002950:PG1701|5end_glutamine_amidotransferase,_class_II/dipeptidase_1787953..1788183_NEGATIVE 497 1040 996 205 159 NC_002950:PG1022|5end_hypothetical_protein_1083537..1083767_POSITIVE 459 780 731 79 29 NC_002950:PG0120|5end_UDP-N-acetylglucosamine_2-epimerase_143004..143234_POSITIVE 458 256 211 71 22 NC_002950:PG1497|5end_DNA-binding_protein,_histone-like_family_1574085..1574315_POSITIVE 456 260 213 97 42 NC_002950:PG0246|5end_hypothetical_protein_281241..281471_NEGATIVE 445 970 925 168 121 NC_002950:PG1398|5end_hypothetical_protein_1480694..1480924_POSITIVE 443 330 281 133 81 NC_002950:PG2149|5end_hypothetical_protein_2257658..2257888_NEGATIVE 442 799 751 195 145 NC_002950:PG0307|5end_NADH-ubiquinone_oxidoreductase_342560..342790_POSITIVE 439 250 205 165 121 NC_002950:PG1966|5end_hypothetical_protein_2056924..2057154_NEGATIVE 433 260 211 174 124 NC_002950:PG0339|5end_hypothetical_protein_375062..375292_POSITIVE 433 257 215 37 2 NC_002950:PG0332|5end_transcription_termination_factor_Rho_365619..365849_POSITIVE 427 1070 1025 117 57 NC_002950:PG2075|5end_hypothetical_protein_2176466..2176696_NEGATIVE 427 1070 1025 117 57 NC_002950:PG1266|5end_hypothetical_protein_1346987..1347217_NEGATIVE 422 898 851 211 159 NC_002950:PG0211|5end_cobalamin_biosynthesis_protein_CbiG/precorrin-4_C11-methyltransferase_247810..248040_NEGATIVE 421 820 773 160 116 NC_002950:PG0767|5end_4-alpha-glucanotransferase_820533..820763_NEGATIVE 417 265 223 94 43 NC_002950:PG1181|5end_transcriptional_regulator,_tetR_family_1264255..1264485_NEGATIVE 417 873 834 109 63 NC_002950:PG0606|5end_hypothetical_protein_662558..662788_NEGATIVE 415 836 791 227 173 NC_002950:PG2001|5end_signal_peptidase_I_2090855..2091085_NEGATIVE 415 509 461 73 17 NC_002950:PG0374|5end_hypothetical_protein_405564..405794_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 556 290 246 65 24 NC_002950:PG1702|3end_DNA_gyrase,_B_subunit_1787946..1788096_NEGATIVE 488 1040 997 46 1 NC_002950:PG1020|3end_hypothetical_protein_1083458..1083608_POSITIVE 459 780 731 73 23 NC_002950:PG0119|3end_glycosyl_transferase,_WecB/TagA/CpsF_family_143078..143228_POSITIVE 457 800 752 117 56 NC_002950:PG2214|3end_hypothetical_protein_2325301..2325451_NEGATIVE 443 330 281 124 72 NC_002950:PG2150|3end_LysM_domain_protein_2257667..2257817_NEGATIVE 418 280 231 150 97 NC_002950:PG1625|3end_hypothetical_protein_1708718..1708868_POSITIVE 414 280 231 83 12 NC_002950:PG0803|3end_glucosamine-6-phosphate_deaminase_859727..859877_NEGATIVE 413 1050 1002 78 35 NC_002950:PG1649|3end_hypothetical_protein_1730030..1730180_NEGATIVE 413 778 732 149 93 NC_002950:PG0361|3end_hypothetical_protein_395481..395631_POSITIVE 411 770 721 87 20 NC_002950:PG1924|3end_ribosomal_protein_S8_2017960..2018110_NEGATIVE 409 800 759 120 80 NC_002950:PG1392|3end_rod_shape-determining_protein_RodA,_putative_1472959..1473109_NEGATIVE 408 1060 1011 77 16 NC_002950:PG0752|3end_uracil_phosphoribosyltransferase_798397..798547_POSITIVE 406 895 852 71 13 NC_002950:PG1078|3end_electron_transfer_flavoprotein,_alpha_subunit_1146525..1146675_POSITIVE 406 320 271 65 15 NC_002950:PG0735|3end_aminotransferase,_class_V_785677..785827_POSITIVE 405 179 131 99 48 NC_002950:PG0815|3end_hypothetical_protein_876447..876597_POSITIVE 401 897 853 65 20 NC_002950:PG0605|3end_hypothetical_protein_661165..661315_NEGATIVE 400 258 214 147 82 NC_002950:PG0555|3end_DNA-binding_protein,_histone-like_family_611716..611866_NEGATIVE 399 445 401 71 12 NC_002950:PG1105|3end_RNA_polymerase_sigma-54_factor_1175716..1175866_NEGATIVE 397 289 243 47 3 NC_002950:PG2034|3end_oxidoreductase,_FAD-binding,_putative_2134910..2135060_NEGATIVE 394 229 186 61 11 NC_002950:PG1676|3end_phosphoenolpyruvate_carboxykinase_1760489..1760639_NEGATIVE