Origin IGS: ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctccaactgcttcctgccgacggtgtagaaacgccccgtgcgtcttacctccgtgtatgggcgcatgttgtcatagctcggctggcaggtcgtataggtgagtgtgttttcggcaggggtgagtttccatatatcctgcacgatgcgccttacctgcgtcctgtccgtcctgcaacctgcgcagttcagcagcaggagcatatcgttgatgcagaaggagaaagcggacgctttcatacagtccatgacttcaaggcagatttccgccatctccacctccgtcctgttgcggttgctccgtataatcctgctcagggcttgcgtgtggatgagttcgggactgaaccacatacggctctcttttgtcgtggacagtgtgcggtgttcaaggaaatgcagaaaggcaggtatttcatccttcaccctttgcaggaaatccgtgtcgtccctctctatcctccctacttttcttacccaatagcgcgtctcccctgcgtcgatgatgacgggcaggtgttcgttgttggagcatagtacaaacttggcaaagaacgaaatctcgtccctgtccttatcctccgcctccaccttgtaggaaagggtggtgctgaggttcttgagccgctcgctgtcctccctgcggtcgagaagcacctcgtccacgaggatgagcagtttcccagcctagtccgagttgaactgacttcgaaagtcctcgttggtgttgaaggttacattgctgccgaagagggctttgaggaagttgagaaatgtgctcttgcccgtgtttcgctcctccgatacgagcagcaggatgggcagtttctgtatgggacgcaggtagagcagttgcaaatagtccatgcccagctcgtactgctccccgaagatgtgccttaccaatgtctctatatggggaaacgcacctttcttcggctggtgtcccgtcggctcgtagagattgaggaaactgcctatcacgggctgatagttcacatggtcggggacggtgcagaagccgtcatacttcgggacggtcgccagatagtccctgccgtagtcctgccgtagcgtctcgttgttccacacgatgcgcttcttgacgaaaccgcctccgacgagtggcaggtttaccatcttgtagagcgtcgttcccacacggacgaatgccccgtcctctattctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 ggatagctgtcagtgacgagttgtatagagctatcgagaaaagaaaaaaatgaatacaatcctttttattttgatgaattgatgaataggtatataagtatgattgagtatcaagtgattgcaagttcatcaacatatcatcagacgcttgcggacgatgaaagaaaaaggcatttttcctttttcagcaaccctcgacaaatccgaccaaattatcctcctgctcccctcaattcttgctccgcatctccctgttttcctctgttttaattccgttctgtttttctttcactgttccgcatcattcttcacaagtgggtttcggaacgatgtccgtaactttgcacgatacatatatcaatcatttaagcaagaaagaaatgagtaagaaaaacaatgacgagctgttggaagacaagcccgaaaaaagagaaaggagaatagaggacggggcattcgtccgtgtgggaacgacgctctacaagatggtaaacctgccactcgtcggaggcggtttcgtcaagaagcgcatcgtgtggaacaacgagacgctacggcaggactacggcagggactatctggcgaccgtcccgaagtatgacggcttctgcaccgtccccgaccatgtgaactatcagcccgtgataggcagtttcctcaatctctacgagccgacgggacaccagccgaagaaaggtgcgtttccccatatagagacattggtaaggcacatcttcggggagcagtacgagctgggcatggactatttgcaactgctctacctgcgtcccatacagaaactgcccatcctgctgctcgtatcggaggagcgaaacacgggcaagagcacatttctcaacttcctcaaagccctcttcggcagcaatgtaaccttcaacaccaacgaggactttcgaagtcagttcaactcggactaggctgggaaactgctcatcctcgtggacgaggtgcttctcgaccgcagggaggacagcgagcggctcaagaacctcagcaccaccctttcctacaaggtggaggcggaggataaggacagggacgagatttcgttctttgccaagtttgtactatgctccaacaacgaacacctgcccgtcatcatcgacgcaggggagacgcgctattgggtaagaaaagtagggaggatagagagggacgacacggatttcctgcaaagggtgaaggatgaaatacctgcctttctgcatttccttgaacaccgcacactgtccacgacaaaagagagccgtatgtggttcagtcccgaactcatccacacgcaagccctgagcaggattatacggagcaaccgcaacaggacggaggtggagatggcggaaatctgccttgaagtcatggactgtatgaaagcgtccgctttctccttctgcatcaacgatatgctcctgctgctgaactgcgcaggttgcaggacggacaggacgcaggtaaggcgcatcgtgcaggatatatggaaactcacccctgccgaaaacacactcacctatacgacctgccagccgagctatgacaacatgcgcccatacacggaggtaagacgcacggggcgtttctacaccgtcggcaggaagcagttggaggacatgcagggataagggctgtggaaatgatgaaactccgctttgacaagcggcttgatgagaacacgatgaaggtgtattgtattgattatcatattattgaaaaagtactcatcaattcatcagaaatttcatcactccgacttcggtgggaaacggcagtggcattacaggcggaaacggaacaggcagaacacgctgatataagcagtagaaaaggtag Mask Tandem Repeat Region ================================================ ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctccaactgcttcctgccgacggtgtagaaacgccccgtgcgtcttacctccgtgtatgggcgcatgttgtcatagctcggctggcaggtcgtataggtgagtgtgttttcggcaggggtgagtttccatatatcctgcacgatgcgccttacctgcgtcctgtccgtcctgcaacctgcgcagttcagcagcaggagcatatcgttgatgcagaaggagaaagcggacgctttcatacagtccatgacttcaaggcagatttccgccatctccacctccgtcctgttgcggttgctccgtataatcctgctcagggcttgcgtgtggatgagttcgggactgaaccacatacggctctcttttgtcgtggacagtgtgcggtgttcaaggaaatgcagaaaggcaggtatttcatccttcaccctttgcaggaaatccgtgtcgtccctctctatcctccctacttttcttacccaatagcgcgtctcccctgcgtcgatgatgacgggcaggtgttcgttgttggagcatagtacaaacttggcaaagaacgaaatctcgtccctgtccttatcctccgcctccaccttgtaggaaagggtggtgctgaggttcttgagccgctcgctgtcctccctgcggtcgagaagcacctcgtccacgaggatgagcagtttcccagcctagtccgagttgaactgacttcgaaagtcctcgttggtgttgaaggttacattgctgccgaagagggctttgaggaagttgagaaatgtgctcttgcccgtgtttcgctcctccgatacgagcagcaggatgggcagtttctgtatgggacgcaggtagagcagttgcaaatagtccatgcccagctcgtactgctccccgaagatgtgccttaccaatgtctctatatggggaaacgcacctttcttcggctggtgtcccgtcggctcgtagagattgaggaaactgcctatcacgggctgatagttcacatggtcggggacggtgcagaagccgtcatacttcgggacggtcgccagatagtccctgccgtagtcctgccgtagcgtctcgttgttccacacgatgcgcttcttgacgaaaccgcctccgacgagtggcaggtttaccatcttgtagagcgtcgttcccacacggacgaatgccccgtcctctattctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Find is-nt database================================================ Query_seq: PG1110:PG1112|PG1110:PG1112:hypothetical protein:hypothetical protein:->->:1183298..1185142 1845 ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctccaactgcttcctgccgacggtgtagaaacgccccgtgcgtcttacctccgtgtatgggcgcatgttgtcatagctcggctggcaggtcgtataggtgagtgtgttttcggcaggggtgagtttccatatatcctgcacgatgcgccttacctgcgtcctgtccgtcctgcaacctgcgcagttcagcagcaggagcatatcgttgatgcagaaggagaaagcggacgctttcatacagtccatgacttcaaggcagatttccgccatctccacctccgtcctgttgcggttgctccgtataatcctgctcagggcttgcgtgtggatgagttcgggactgaaccacatacggctctcttttgtcgtggacagtgtgcggtgttcaaggaaatgcagaaaggcaggtatttcatccttcaccctttgcaggaaatccgtgtcgtccctctctatcctccctacttttcttacccaatagcgcgtctcccctgcgtcgatgatgacgggcaggtgttcgttgttggagcatagtacaaacttggcaaagaacgaaatctcgtccctgtccttatcctccgcctccaccttgtaggaaagggtggtgctgaggttcttgagccgctcgctgtcctccctgcggtcgagaagcacctcgtccacgaggatgagcagtttcccagcctagtccgagttgaactgacttcgaaagtcctcgttggtgttgaaggttacattgctgccgaagagggctttgaggaagttgagaaatgtgctcttgcccgtgtttcgctcctccgatacgagcagcaggatgggcagtttctgtatgggacgcaggtagagcagttgcaaatagtccatgcccagctcgtactgctccccgaagatgtgccttaccaatgtctctatatggggaaacgcacctttcttcggctggtgtcccgtcggctcgtagagattgaggaaactgcctatcacgggctgatagttcacatggtcggggacggtgcagaagccgtcatacttcgggacggtcgccagatagtccctgccgtagtcctgccgtagcgtctcgttgttccacacgatgcgcttcttgacgaaaccgcctccgacgagtggcaggtttaccatcttgtagagcgtcgttcccacacggacgaatgccccgtcctctattctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG1110:PG1112|PG1110:PG1112:hypothetical protein:hypothetical protein:->->:1183298..1185142 1845 ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctccaactgcttcctgccgacggtgtagaaacgccccgtgcgtcttacctccgtgtatgggcgcatgttgtcatagctcggctggcaggtcgtataggtgagtgtgttttcggcaggggtgagtttccatatatcctgcacgatgcgccttacctgcgtcctgtccgtcctgcaacctgcgcagttcagcagcaggagcatatcgttgatgcagaaggagaaagcggacgctttcatacagtccatgacttcaaggcagatttccgccatctccacctccgtcctgttgcggttgctccgtataatcctgctcagggcttgcgtgtggatgagttcgggactgaaccacatacggctctcttttgtcgtggacagtgtgcggtgttcaaggaaatgcagaaaggcaggtatttcatccttcaccctttgcaggaaatccgtgtcgtccctctctatcctccctacttttcttacccaatagcgcgtctcccctgcgtcgatgatgacgggcaggtgttcgttgttggagcatagtacaaacttggcaaagaacgaaatctcgtccctgtccttatcctccgcctccaccttgtaggaaagggtggtgctgaggttcttgagccgctcgctgtcctccctgcggtcgagaagcacctcgtccacgaggatgagcagtttcccagcctagtccgagttgaactgacttcgaaagtcctcgttggtgttgaaggttacattgctgccgaagagggctttgaggaagttgagaaatgtgctcttgcccgtgtttcgctcctccgatacgagcagcaggatgggcagtttctgtatgggacgcaggtagagcagttgcaaatagtccatgcccagctcgtactgctccccgaagatgtgccttaccaatgtctctatatggggaaacgcacctttcttcggctggtgtcccgtcggctcgtagagattgaggaaactgcctatcacgggctgatagttcacatggtcggggacggtgcagaagccgtcatacttcgggacggtcgccagatagtccctgccgtagtcctgccgtagcgtctcgttgttccacacgatgcgcttcttgacgaaaccgcctccgacgagtggcaggtttaccatcttgtagagcgtcgttcccacacggacgaatgccccgtcctctattctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG1110:PG1112|PG1110:PG1112:hypothetical protein:hypothetical protein:->->:1183298..1185142 1845 ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctccaactgcttcctgccgacggtgtagaaacgccccgtgcgtcttacctccgtgtatgggcgcatgttgtcatagctcggctggcaggtcgtataggtgagtgtgttttcggcaggggtgagtttccatatatcctgcacgatgcgccttacctgcgtcctgtccgtcctgcaacctgcgcagttcagcagcaggagcatatcgttgatgcagaaggagaaagcggacgctttcatacagtccatgacttcaaggcagatttccgccatctccacctccgtcctgttgcggttgctccgtataatcctgctcagggcttgcgtgtggatgagttcgggactgaaccacatacggctctcttttgtcgtggacagtgtgcggtgttcaaggaaatgcagaaaggcaggtatttcatccttcaccctttgcaggaaatccgtgtcgtccctctctatcctccctacttttcttacccaatagcgcgtctcccctgcgtcgatgatgacgggcaggtgttcgttgttggagcatagtacaaacttggcaaagaacgaaatctcgtccctgtccttatcctccgcctccaccttgtaggaaagggtggtgctgaggttcttgagccgctcgctgtcctccctgcggtcgagaagcacctcgtccacgaggatgagcagtttcccagcctagtccgagttgaactgacttcgaaagtcctcgttggtgttgaaggttacattgctgccgaagagggctttgaggaagttgagaaatgtgctcttgcccgtgtttcgctcctccgatacgagcagcaggatgggcagtttctgtatgggacgcaggtagagcagttgcaaatagtccatgcccagctcgtactgctccccgaagatgtgccttaccaatgtctctatatggggaaacgcacctttcttcggctggtgtcccgtcggctcgtagagattgaggaaactgcctatcacgggctgatagttcacatggtcggggacggtgcagaagccgtcatacttcgggacggtcgccagatagtccctgccgtagtcctgccgtagcgtctcgttgttccacacgatgcgcttcttgacgaaaccgcctccgacgagtggcaggtttaccatcttgtagagcgtcgttcccacacggacgaatgccccgtcctctattctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 6 Min: 227 Max: 1405 Len: 1179 Subject: UniRef90_Q9KI95 Cluster: Hypothetical protein; n=1; Bacteroides uniformis|Rep: Hypothetical protein - Bacteroides uniformis HSP 1 e-value: 1.0E-156 bit: 553.0 Len: 1179 Query Start:227 Query End:1405 Subject Strand: null Subject Start: 1 Subject End: 393 .................................................................................................................................................................................................................................. I E D G A F V R V G T T L Y K M V N L P L V G G G F V K K R I V W N N E T L R Q D Y G R D Y L A T V P K Y D G F C T V P D H V N Y Q P V I G S F L N L Y E P T G H Q P K K G A F P H I E T L V R H I F G E Q Y E L G M D Y L Q L L Y L R P I Q K L P I L L L V S E E R N T G K S T F L N F L K A L F G S N V T F N T N E D F R S Q F N S D * A G K L L I L V D E V L L D R R E D S E R L K N L S T T L S Y K V E A E D K D R D E I S F F A K F V L C S N N E H L P V I I D A G E T R Y W V R K V G R I E R D D T D F L Q R V K D E I P A F L H F L E H R T L S T T K E S R M W F S P E L I H T Q A L S R I I R S N R N R T E V E M A E I C L E V M D C M K A S A F S F C I N D M L L L L N C A G C R T D R T Q V R R I V Q D I W K L T P A E N T L T Y T T C Q P S Y D N M R P Y T E V R R T G R F Y T V G R K Q L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................ .................................................................................................................................................................................................................................. M K E E E Y M R V G T T L Y K V V N Q P C A N G G Y E K K R V V W N N S T L R Q D Y G K N Y L A T V P K Y D G F C T V P N H L N Y Q K E I E G F L N L Y E P I E H K P Q Q G D F S H I Q S L M R H I F G E Q Y E L G M D Y M Q L L Y L Q P T Q K L P I V L L V S E E R N T G K S T F L N F L K A V F E N N V T F N T N E D F R S Q F N S D W A G K L L I V V D E V L L Y R R E D S E R L K N L S T T F T Y K V E A K G K D R T E I A F F A K F V L C S N N E Y L P I L I D A G E T R Y W V R K I M P L Q S D D T N F L Q K L K A E I P A F L Y F L T Q R E L S T T Q E S R M W F N P R L T H T A A L Q K I I R S N R N R L E I E M T E L L L D I M S N M N V E S V S F C L N D L V T L L L Y S Q V K V E K Y Q V R K V V Q E V W K L T S A H N S L S Y T A Y E F A P H R E C H Y E P K R K T G R F Y T V T K E Q L ........................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: UniRef90_A3XIS0 Cluster: Hypothetical protein; n=1; Leeuwenhoekiella blandensis MED217|Rep: Hypothetical protein - Leeuwenhoekiella blandensis MED217 HSP 1 e-value: 1.0E-96 bit: 357.0 Len: 1164 Query Start:227 Query End:1390 Subject Strand: null Subject Start: 6 Subject End: 391 .................................................................................................................................................................................................................................. F V R V G T T L Y K M V N L P L V G G G F V K K R I V W N N E T L R Q D Y G R D Y L A T V P K Y D G F C T V P D H V N Y Q P V I G S F L N L Y E P T G H Q P K K G A F P H I E T L V R H I F G E Q Y E L G M D Y L Q L L Y L R P I Q K L P I L L L V S E E R N T G K S T F L N F L K A L F G S N V T F N T N E D F R S Q F N S D * A G K L L I L V D E V L L D R R E D S E R L K N L S T T L S Y K V E A E D K D R D E I S F F A K F V L C S N N E H L P V I I D A G E T R Y W V R K V G R I E R D D T D F L Q R V K D E I P A F L H F L E H R T L S T T K E S R M W F S P E L I H T Q A L S R I I R S N R N R T E V E M A E I C L E V M D C M K A S A F S F C I N D M L L L L N C A G C R T D R T Q V R R I V Q D I W K L T P A E N T L T Y T T C Q P S Y D N M R P Y T E V R R T G R F Y T V G R K Q L ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................. Y K R V G T T Y Y K L V A A P T I A G H F N E F L V H W N I E T I K Q D H G K A Y L T K I P K Y D G F T C I P N H I N F K Q E Y K G F Y N I Y S P L S K E P L E G S C E T T I G F L E H I F G K Q L A L G L D Y L Q L L Y T K P V Q V L P I L C L V S K E R S T G K S T F L K W L K S I F E N N L T Y L T N D S F S S Q F N S D W A N K L L I C I D E V L F N K E E L T E R I K Y L S T T N I N K L E A K G K D K R E V E F F G K F I L C S N N E D N F I K I D A N E T R F W V L K V P S I K K E S T N F L E H L I A E I P A F L Y F L F N R K L S T P H Q T R M W F T P G Q I K T A A L T K L V K N N R N R V E K E L A S I L M G V I E K F D L E E V D F C P L D A L N A L N K T R V K T D L T Q L R R L L K V D W N L T N Q P N S N Q Y R K F V I W S D G - - T I T L I E A K G R Y F T V K K E F L ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A2HKN7 Cluster: Hypothetical protein; n=2; Trichomonas vaginalis G3|Rep: Hypothetical protein - Trichomonas vaginalis G3 HSP 1 e-value: 1.0E-6 bit: 58.2 Len: 675 Query Start:464 Query End:1138 Subject Strand: null Subject Start: 119 Subject End: 347 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H I E T L V R H I F G E Q Y E L G M D Y L Q L L Y L R P I Q K L P I L L L V S E E R N T G K S T F L N F L - - K A L F G - S N V T F N T N E D F R S Q F N S D * A G K L L I L V D E V L - L D R R E - - D S E R L K N L S T T L S Y K V E A E D K D R D E I S F F A K F V L C S N N E H L P V I I D A G E T R Y W V R K V G R I E R D D T D F L Q R V K D E I P A F L H - - - F L E H R T L S T T K E S R M W F S P E L I - H T Q A L S R I I R S N R N R T E V E M A E I C L E V M D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H V K E I I C N G N E R V Y E Y I L C W F A N I L Q H P S A K N E T A L I I I G K Q G T G K N T F F T D I L C K L L E G Y S N P N M T N L E N I C G K F N S S I E N M K L I V C N E L Q S I D T T K V L N S D A L K S L I T D K V G V V E R K Y K D Q R V C E N V A N F V M V S N N A - V P M K L E S S D R R Y V V V R T S D S H M Q D T E Y F D D L A E T L T S D F Y N H L F S Y F M T L D I S K - - - - - F N P R Q I P H T E E R Q T L L E A N K S V Y E L F I D E T D F E C L D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A2HV86 Cluster: Poxvirus D5 protein; n=33; Trichomonas vaginalis G3|Rep: Poxvirus D5 protein - Trichomonas vaginalis G3 HSP 1 e-value: 1.0E-6 bit: 57.8 Len: 675 Query Start:464 Query End:1138 Subject Strand: null Subject Start: 56 Subject End: 284 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H I E T L V R H I F G E Q Y E L G M D Y L Q L L Y L R P I Q K L P I L L L V S E E R N T G K S T F L N F L - - K A L F G - S N V T F N T N E D F R S Q F N S D * A G K L L I L V D E V L - L D R R E - - D S E R L K N L S T T L S Y K V E A E D K D R D E I S F F A K F V L C S N N E H L P V I I D A G E T R Y W V R K V G R I E R D D T D F L Q R V K D E I P A F L H - - - F L E H R T L S T T K E S R M W F S P E L I - H T Q A L S R I I R S N R N R T E V E M A E I C L E V M D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... H V K E I I C N G N E R V Y E Y I L C W F A N I L Q H P S A K N E T A L I I I G K Q G T G K N T F F T D I L C K L L E G Y S N P N M T N L E N I C G K F N S S I E N M K L I V C N E L Q S I D T T K V L N S D A L K S L I T D K V G V V E R K Y K D Q R V C E N V A N F I M V S N N A - V P M K L E S S D R R Y V V V R T S D S H M Q D T E Y F D D L A E T L T S D F Y N H L F S Y F M T L D I S K - - - - - F N P R Q I P H T E E R Q T L L E A N K S V Y E L F I D E T N F E C L D ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A2HNN4 Cluster: Hypothetical protein; n=228; Trichomonas vaginalis G3|Rep: Hypothetical protein - Trichomonas vaginalis G3 HSP 1 e-value: 3.0E-6 bit: 56.6 Len: 636 Query Start:464 Query End:1099 Subject Strand: null Subject Start: 8 Subject End: 223 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Y E L G M D Y L Q L L Y L R P I Q K L P I L L L V S E E R N T G K S T F L N F L - - K A L F G - S N V T F N T N E D F R S Q F N S D * A G K L L I L V D E V L - L D R R E - - D S E R L K N L S T T L S Y K V E A E D K D R D E I S F F A K F V L C S N N E H L P V I I D A G E T R Y W V R K V G R I E R D D T D F L Q R V K D E I - P A F L H - - F L E H R T L S T T K E S R M W F S P E L I - H T Q A L S R I I R S N R N R T E V E M A E I C L E V M D .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Y E Y I L C W F A N I L Q H P S A K N E T A L I I I G K Q G T G K N T F F T D I L C K L L E G Y S N P N M T N L E N I C G K F N S S I E N M K L I V C N E L Q S I D T T K V L N S D A L K S L I T D K V G V V E R K Y K D Q R V C E N V A N F I M V S N N V - V P M K L E S S D R R Y V V V R T S D S H M Q D T E Y F D D L A E T L T P N F Y N H L F S Y F M T L D I S K - - - - - F N P R Q I P H T E E R Q T L L E A N K S V Y E L F I D E T N F E C L D .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: UniRef90_A3V1V5 Cluster: Hypothetical protein; n=1; Loktanella vestfoldensis SKA53|Rep: Hypothetical protein - Loktanella vestfoldensis SKA53 HSP 1 e-value: 5.0E-6 bit: 55.8 Len: 342 Query Start:695 Query End:1036 Subject Strand: null Subject Start: 251 Subject End: 365 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L L L V S E E R N T G K S T F L N F L K A L F G S N V T F N T N - - E D F R S Q F N S D * A G K L L I L V D E V L L D R R E D S - E R L K N L S T T L S Y K V E A E D K D R D E I S F F A K F V L C S N N E H L P V I I D A G E T R Y W V ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... I F L Y S E T K G T G K S T L L E L G Q A L F G E A N T A N E N G I E G L T Q R F S I D S L S K K F I K V E E V K L S S H S D A G N K M K D Y I T G E T A M L D V K N L S K Q T I R L K C A F M L T T N - - H K P T W L E G G E R R Y F L ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Predict ORF larger than 30AA ================================================ Protein_Len: 39 Strand: + Start: 13 End: 129 ............ M L I S A C S A C S V S A C N A T A V S H R S R S D E I S D E L M S T F S I I .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 48 Strand: + Start: 105 End: 248 ........................................................................................................ M D E Y F F N N M I I N T I H L H R V L I K P L V K A E F H H F H S P Y P C M S S N C F L P T V ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 139 End: 321 .......................................................................................................................................... M Q Y T F I V F S S S R L S K R S F I I S T A L I P A C P P T A S C R R C R N A P C V L P P C M G A C C H S S A G R S Y .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 321 End: 701 ................................................................................................................................................................................................................................................................................................................................ M S V F S A G V S F H I S C T M R L T C V L S V L Q P A Q F S S R S I S L M Q K E K A D A F I Q S M T S R Q I S A I S T ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 46 Strand: + Start: 586 End: 723 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M S W T V C G V Q G N A E R Q V F H P S P F A G N P C R P S L S S L L F L P N S A S P L R R .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 215 End: 754 ...................................................................................................................................................................................................................... M H V L Q L L P A D G V E T P R A S Y L R V W A H V V I A R L A G R I G E C V F G R G E F P Y I L H D A P Y L R P V R P ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 31 Strand: + Start: 723 End: 815 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M M T G R C S L L E H S T N L A K N E I S S L S L S S A S T L ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 41 Strand: + Start: 942 End: 1064 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M V L K V T L L P K R A L R K L R N V L L P V F R S S D T S S R M G S F C M G R R ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 31 Strand: + Start: 1086 End: 1178 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M P S S Y C S P K M C L T N V S I W G N A P F F G W C P V G S ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 994 End: 1185 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M C S C P C F A P P I R A A G W A V S V W D A G R A V A N S P C P A R T A P R R C A L P M S L Y G E T H L S S A G V P S .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 797 End: 1291 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M L R L H L V G K G G A E V L E P L A V L P A V E K H L V H E D E Q F P S L V R V E L T S K V L V G V E G Y I A A E E G .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 47 Strand: + Start: 1345 End: 1485 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M A G L P S C R A S F P H G R M P R P L F S F L F F R A C L P T A R H C F S Y S F L S C L N D ........................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 34 Strand: + Start: 1612 End: 1713 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M E G S R R I I W S D L S R V A E K G K M P F S F I V R K R L M I C .................................................................................................................................... Protein_Len: 45 Strand: + Start: 1710 End: 1844 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M L M N L Q S L D T Q S Y L Y T Y S S I H Q N K K D C I H F F L F S I A L Y N S S L T A I . Protein_Len: 60 Strand: - Start: 1579 End: 1839 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... F F S F H R K R E D D A L T Q H Y T S S S A I V Q Y E I M S I Y R N M L E D F Y F P N Y E N K E K R S L E I C S T V S M ...... Protein_Len: 60 Strand: - Start: 1461 End: 1727 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... S C H F F F L V S N F C L F V P L H P A L I S P L L L I I Q D S K D L T A S F P F I G K E K M T R L R R I I H Q H V Q M ...................................................................................................................... Protein_Len: 48 Strand: - Start: 1248 End: 1391 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... V E P R D G S L G Q R L G A T A D R Q E V R H A E Q R F R R R R T A P K G D Q L A D N G C P R M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 41 Strand: - Start: 958 End: 1080 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M A A S S P K S S T S F H A R A R T E S R R Y S C C S P C N R Y P V C T S C N C M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 911 End: 1609 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. D E L L E D N N K K S M E K K S L H N I Y T D H L T V S M T G F G V Q S S H H P V T F S F C F P I L V S S F L S I R L M ............................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 798 End: 1238 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. A P L A T A F L G H G A R V A G R L H A K G I D R Y P S V C R E E A P T G D A R L S Q P F Q R D R A S L E C P R P R H M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 697 End: 906 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ S P C T N T T P A Y Y L S P L S R F R T G T R I R R R W R T P F P P A S T R S G S A T R G A T S F C R T W S S S C N G M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: - Start: 639 End: 755 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. G E G K A P F G H R G E R D E R S K K G L L A D G R R R H H R A P T R Q Q L M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 34 Strand: - Start: 538 End: 639 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... P K R T S S N P V S G C V A R K Q R P C H A T N L S I C F P L Y K M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: - Start: 477 End: 572 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ P L N G G D G G G D Q Q P Q E T Y D Q E P S A H P H T R S Q V M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 56 Strand: - Start: 297 End: 464 ........................................................................................................................................................................................................................................................................................................ L E A P L D Y L H T H K R C P H T E M Y G A R H A K G A D Q G D Q L R R L E A A P A Y R Q H L L L F R V S E Y M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 212 End: 898 ................................................................................................................................................................................................................... D I I V P L H E N N S C L V F K A F F S I E D R D K D E A E V K Y S L T T S L N K L R E S D E R R D L L V E D V L I L M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 42 Strand: - Start: 20 End: 145 ................... I L T N Q R N R K R R Y H W Q R K G G F D S H H F K Q H I S S Y K K L L I I I L V M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 3 End: 281 .. S N I L V K E I I H Y D I C Y V K M T N E D L R K D F R L K M M E V A R I G A H G G V A E Q R R H L F A G H T K G G H M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 46 HP_score: -2.6 Tail_Score: -3.4252 Start: 260 End: 290 Full_Region: GGTGTAGAAACGCCC CGTGCGTCTTAC CTCCGT GTATGGGCGCATG TTGTCATAGCTCGGC ...................................................................................................................................................................................................................................................................CGTGCGTCTTACCTCCGTGTATGGGCGCATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 52 HP_score: -3.6 Tail_Score: -3.54741 Start: 852 End: 898 Full_Region: TTCTTGAGCCGCTCG CTGTCCTCCCTGCGGTCGAG AAGCAC CTCGTCCACGAGGATGAGCAG TTTCCCAGCCTAGTC ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCTCCCTGCGGTCGAGAAGCACCTCGTCCACGAGGATGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Find igs database================================================ Query_seq: PG1110:PG1112|PG1110:PG1112:hypothetical protein:hypothetical protein:->->:1183298..1185142 1845 ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc Intra-Species Hit: Count: 1 Min: 1 Max: 1845 Len: 1845 Subject: NC_002950_PG1110_PG1112|hypothetical protein:hypothetical protein|POSITIVE:POSITIVE|[1183298,1185142]|1845 HSP 1 e-value: 0.0 bit: 831.0 Len: 440 Query Start:1406 Query End:1845 Subject Strand: POSITIVE Subject Start: 1406 Subject End: 1845 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcannnnnnncttttctcgatagctctatacaactcgtcactgacagctatcc .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tctcctttctcttttttcgggcttgtcttccaacagctcgtcattgtttttcttactcatttctttcttgcttaaatgattgatatatgtatcgtgcaaagttacggacatcgttccgaaacccacttgtgaagaatgatgcggaacagtgaaagaaaaacagaacggaattaaaacagaggaaaacagggagatgcggagcaagaattgaggggagcaggaggataatttggtcggatttgtcgagggttgctgaaaaaggaaaaatgcctttttctttcatcgtccgcaagcgtctgatgatatgttgatgaacttgcaatcacttgatactcaatcatacttatatacctattcatcaattcatcaaaataaaaaggattgtattcatttttttcttttctcgatagctctatacaactcgtcactgacagctatcc HSP 2 e-value: 1.0E-124 bit: 448.0 Len: 226 Query Start:1 Query End:226 Subject Strand: POSITIVE Subject Start: 1 Subject End: 226 ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ctaccttttctactgcttatatcagcgtgttctgcctgttccgtttccgcctgtaatgccactgccgtttcccaccgaagtcggagtgatgaaatttctgatgaattgatgagtactttttcaataatatgataatcaatacaatacaccttcatcgtgttctcatcaagccgcttgtcaaagcggagtttcatcatttccacagcccttatccctgcatgtcctc................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ CUACCUUUUCUACUGCUUAUAUCAGCGUGUUCUGCCUGUUCCGUUUCCGCCUGUAAUGCCACUGCCGUUUCCCACCGAAGUCGGAGUGAUGAAAUUUCUGAUGAAUUGAUGAGUACUUUUUCAAUAAUAUGAUAAUCAAUACAAUACACCUUCAUCGUGUUCUCAUCAAGCCGCUUGUCAAAGCGGAGUUUCAUCAUUUCCACAGCCCUUAUCCCUGCAUGUCCUCCAACUGCUUCCUGCCGACGGUGUAGAAACGCCCCGUGCGUCUUACCUCCGUGUAUGGGCGCAUGUUGUCAUAGCUCGGCUGGCAGGUCGUAUAGGUGAGUGUGUUUUCGGCAGGGGUGAGUUUCCAUAUAUCCUGCACGAUGCGCCUUACCUGCGUCCUGUCCGUCCUGCAACCUGCGCAGUUCAGCAGCAGGAGCAUAUCGUUGAUGCAGAAGGAGAAAGCGGACGCUUUCAUACAGUCCAUGACUUCAAGGCAGAUUUCCGCCAUCUCCACCUCCGUCCUGUUGCGGUUGCUCCGUAUAAUCCUGCUCAGGGCUUGCGUGUGGAUGAGUUCGGGACUGAACCACAUACGGCUCUCUUUUGUCGUGGACAGUGUGCGGUGUUCAAGGAAAUGCAGAAAGGCAGGUAUUUCAUCCUUCACCCUUUGCAGGAAAUCCGUGUCGUCCCUCUCUAUCCUCCCUACUUUUCUUACCCAAUAGCGCGUCUCCCCUGCGUCGAUGAUGACGGGCAGGUGUUCGUUGUUGGAGCAUAGUACAAACUUGGCAAAGAACGAAAUCUCGUCCCUGUCCUUAUCCUCCGCCUCCACCUUGUAGGAAAGGGUGGUGCUGAGGUUCUUGAGCCGCUCGCUGUCCUCCCUGCGGUCGAGAAGCACCUCGUCCACGAGGAUGAGCAGUUUCCCAGCCUAGUCCGAGUUGAACUGACUUCGAAAGUCCUCGUUGGUGUUGAAGGUUACAUUGCUGCCGAAGAGGGCUUUGAGGAAGUUGAGAAAUGUGCUCUUGCCCGUGUUUCGCUCCUCCGAUACGAGCAGCAGGAUGGGCAGUUUCUGUAUGGGACGCAGGUAGAGCAGUUGCAAAUAGUCCAUGCCCAGCUCGUACUGCUCCCCGAAGAUGUGCCUUACCAAUGUCUCUAUAUGGGGAAACGCACCUUUCUUCGGCUGGUGUCCCGUCGGCUCGUAGAGAUUGAGGAAACUGCCUAUCACGGGCUGAUAGUUCACAUGGUCGGGGACGGUGCAGAAGCCGUCAUACUUCGGGACGGUCGCCAGAUAGUCCCUGCCGUAGUCCUGCCGUAGCGUCUCGUUGUUCCACACGAUGCGCUUCUUGACGAAACCGCCUCCGACGAGUGGCAGGUUUACCAUCUUGUAGAGCGUCGUUCCCACACGGACGAAUGCCCCGUCCUCUAUUCUCCUUUCUCUUUUUUCGGGCUUGUCUUCCAACAGCUCGUCAUUGUUUUUCUUACUCAUUUCUUUCUUGCUUAAAUGAUUGAUAUAUGUAUCGUGCAAAGUUACGGACAUCGUUCCGAAACCCACUUGUGAAGAAUGAUGCGGAACAGUGAAAGAAAAACAGAACGGAAUUAAAACAGAGGAAAACAGGGAGAUGCGGAGCAAGAAUUGAGGGGAGCAGGAGGAUAAUUUGGUCGGAUUUGUCGAGGGUUGCUGAAAAAGGAAAAAUGCCUUUUUCUUUCAUCGUCCGCAAGCGUCUGAUGAUAUGUUGAUGAACUUGCAAUCACUUGAUACUCAAUCAUACUUAUAUACCUAUUCAUCAAUUCAUCAAAAUAAAAAGGAUUGUAUUCAUUUUUUUCUUUUCUCGAUAGCUCUAUACAACUCGUCACUGACAGCUAUCC ...((((((.....((......(((.(((....((.......))...))))))....))((((.(((((((.....)))).)))))))..........(((((((((((((((((........((((((((((............((((.......))))....((((((((((((....))))))...(((((((......((((((((......(((.((((.((((.(.((((((((.((((((((....))))).((((((((((((......))).)))))))))..)))...((..(((.((((((.(((..(((((((.((((..((((((((((((......)))...)))))).))).)))))))))))))).)))))).)))..))..(((...((((((.(((((((((((((.......))))....(((((..(((((.(((((.....((((...))))..))))).....)))))..))))).......)))))))))..(((((((((((..(((((....((((.(.(((((((.((.(((((....)))))))...(((((.(((.(((((((.((((((((.(((((..(((((((........((((((((................((((((.((....)).......................((((...((...((((((((((..((.(((..((((...))))..))).))..)..)))))))))))...))))........)))))).((((....)))).)))).))))..((((.((..(((((((.......))))))).)).)))))))))))))))).)))))))).....(((((((((((((.(.((((.((((.((..((((((((((.((((....(((.((((.....))))...(((((((((.((((((..((.(....).))..)))))).)))))))))..))).)))).))))).)))))...))))))...........(((.(((.((.(((((((.(((((...((((.((((((((((...((((....(((.........)))...))))...))))..((((((((((((.(((.......(((((....)))))...(((((..(((((((((((((..(..(((((((((.((.....((....)).....)))))))))))..)..))).)))))))))).)))))..))).)).))).)))))))...))).))).))))...)))))...))))))).))..))).))).........)))).).))))))))).....))))...)))))))..(((((........))))).))).)))))..))))))).).....))))..((((((....(((.((((.((((((((((((.((......))))))))(((((((((..(....(((((.((((.((((....(((((..........))))))))).(((.((((......)))).)))........))))))))).)..)))))))))..)))))).)))).)))........))))))...)))))..))))))))))))))))).)))..))))))))...).))))..)))).))).))))))))..((((((((.......))))))))..((((((..((....))..)))))).....)))))))..........)))))).....)))))).)))).....))))))))))))))))).....)))))).........................(((((((...........(((...)))))))))). (-632.52) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GGAUAGCUGUCAGUGACGAGUUGUAUAGAGCUAUCGAGAAAAGAAAAAAAUGAAUACAAUCCUUUUUAUUUUGAUGAAUUGAUGAAUAGGUAUAUAAGUAUGAUUGAGUAUCAAGUGAUUGCAAGUUCAUCAACAUAUCAUCAGACGCUUGCGGACGAUGAAAGAAAAAGGCAUUUUUCCUUUUUCAGCAACCCUCGACAAAUCCGACCAAAUUAUCCUCCUGCUCCCCUCAAUUCUUGCUCCGCAUCUCCCUGUUUUCCUCUGUUUUAAUUCCGUUCUGUUUUUCUUUCACUGUUCCGCAUCAUUCUUCACAAGUGGGUUUCGGAACGAUGUCCGUAACUUUGCACGAUACAUAUAUCAAUCAUUUAAGCAAGAAAGAAAUGAGUAAGAAAAACAAUGACGAGCUGUUGGAAGACAAGCCCGAAAAAAGAGAAAGGAGAAUAGAGGACGGGGCAUUCGUCCGUGUGGGAACGACGCUCUACAAGAUGGUAAACCUGCCACUCGUCGGAGGCGGUUUCGUCAAGAAGCGCAUCGUGUGGAACAACGAGACGCUACGGCAGGACUACGGCAGGGACUAUCUGGCGACCGUCCCGAAGUAUGACGGCUUCUGCACCGUCCCCGACCAUGUGAACUAUCAGCCCGUGAUAGGCAGUUUCCUCAAUCUCUACGAGCCGACGGGACACCAGCCGAAGAAAGGUGCGUUUCCCCAUAUAGAGACAUUGGUAAGGCACAUCUUCGGGGAGCAGUACGAGCUGGGCAUGGACUAUUUGCAACUGCUCUACCUGCGUCCCAUACAGAAACUGCCCAUCCUGCUGCUCGUAUCGGAGGAGCGAAACACGGGCAAGAGCACAUUUCUCAACUUCCUCAAAGCCCUCUUCGGCAGCAAUGUAACCUUCAACACCAACGAGGACUUUCGAAGUCAGUUCAACUCGGACUAGGCUGGGAAACUGCUCAUCCUCGUGGACGAGGUGCUUCUCGACCGCAGGGAGGACAGCGAGCGGCUCAAGAACCUCAGCACCACCCUUUCCUACAAGGUGGAGGCGGAGGAUAAGGACAGGGACGAGAUUUCGUUCUUUGCCAAGUUUGUACUAUGCUCCAACAACGAACACCUGCCCGUCAUCAUCGACGCAGGGGAGACGCGCUAUUGGGUAAGAAAAGUAGGGAGGAUAGAGAGGGACGACACGGAUUUCCUGCAAAGGGUGAAGGAUGAAAUACCUGCCUUUCUGCAUUUCCUUGAACACCGCACACUGUCCACGACAAAAGAGAGCCGUAUGUGGUUCAGUCCCGAACUCAUCCACACGCAAGCCCUGAGCAGGAUUAUACGGAGCAACCGCAACAGGACGGAGGUGGAGAUGGCGGAAAUCUGCCUUGAAGUCAUGGACUGUAUGAAAGCGUCCGCUUUCUCCUUCUGCAUCAACGAUAUGCUCCUGCUGCUGAACUGCGCAGGUUGCAGGACGGACAGGACGCAGGUAAGGCGCAUCGUGCAGGAUAUAUGGAAACUCACCCCUGCCGAAAACACACUCACCUAUACGACCUGCCAGCCGAGCUAUGACAACAUGCGCCCAUACACGGAGGUAAGACGCACGGGGCGUUUCUACACCGUCGGCAGGAAGCAGUUGGAGGACAUGCAGGGAUAAGGGCUGUGGAAAUGAUGAAACUCCGCUUUGACAAGCGGCUUGAUGAGAACACGAUGAAGGUGUAUUGUAUUGAUUAUCAUAUUAUUGAAAAAGUACUCAUCAAUUCAUCAGAAAUUUCAUCACUCCGACUUCGGUGGGAAACGGCAGUGGCAUUACAGGCGGAAACGGAACAGGCAGAACACGCUGAUAUAAGCAGUAGAAAAGGUAG .....((((((((((.....(((((....(((..((.((((....(((((.((......)).))))).(((((((((((((((((...........((((((((.....(((((.....((((..((((((......(((((((.((((((((((((......((((((((.......))))))))........(((.((..((((.((...((((((..((((...((((.....((((((((.((...(((((..((((((((((....(((.(((((((((((((..........((.(((((((((....(..((((.((((......)))).))).)..)..((((....))))..............).))).)))))))))))))))).....((.((((((....))).))).)).......)))).)))))))))))))((((((....(((((.((..((((((((((((....((((((..((.((......(((((.(((((.........(.((((..((((........))))..)))).).((((((...((.((((.....)))).)).(((((.........))))).)))))).))))).))))))).))..)))))).(((((((...(((((((((......(((...))).....(((((..((((((((((...((((.((...(((...........))).)).)))).))))))).(((((((.((((.(((.......)))))))..)))))))...))).))))).....))))))))).....((((.(((......))).))))...))))))).))))).............(((((...(((......))).....(((........))).....)))))........))).)))).)).)))))..(((.((....)).(((.(((..((((.(((((....))))).))))..)))((((((.(.((((.(((((..((((.((.(((((...........)))))..)).))))..((((.((((......(((((((((((..((...((((((((((.((((.((........(((((..(((......))))))))......((.(....).)).......))..)))).)))).((((..((...))..)))).)))))).))..))))))))))).))))))))..........)))))...)))).).)))))).........))).)))(..(((((...(((.....)))...)))))..)..)))))).)))))...)).))))))))..(((..((((.(((((((((...(((((....)))))..(...(((((.....)))))...).)))))))))))))..))).....((((.(((((((((((.......(((((.((((((((.(((.((((.((.((((.(((.(..(((.(((((......(....).....))))))))...).).)).))))...)).))))....)))..)).)).)))).)))))......((((..(((((((((.....)))))).))).))))))))))).))))))))))))....)))))))))).))...))))..)).))).....)).)))).))))))..)))))))......))))))..)))).....))))).)))))))).((....))....))))))))))))))))).)))).....(((.((....)).)))..))..))).....))))).((....))..............)))))))...))).............. (-616.10) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 511 849 801 69 28 NC_002950:PG0638|5end_tetraacyldisaccharide_4'-kinase_691183..691413_NEGATIVE 479 1007 962 53 9 NC_002950:PG2143|5end_GTP-binding_protein_EngA_2248547..2248777_POSITIVE 477 1300 1251 202 134 NC_002950:PG0744|5end_RNA_methyltransferase,_TrmH_family_791897..792127_NEGATIVE 475 750 701 175 118 NC_002950:PG1226|5end_peptidyl-prolyl_cis-trans_isomerase,_cyclophilin-type_1303264..1303494_POSITIVE 474 350 301 70 9 NC_002950:PG1605|5end_aminopeptidase_C_1685179..1685409_POSITIVE 462 1045 1001 67 10 NC_002950:PG0171|5end_5'-nucleotidase_family_protein_191724..191954_POSITIVE 460 259 215 195 147 NC_002950:PG2080|5end_adenosylmethionine--8-amino-7-oxononanoate_transaminase_2180679..2180909_NEGATIVE 458 1300 1253 77 34 NC_002950:PG0522|5end_tRNA_delta(2)-isopentenylpyrophosphate_transferase_566901..567131_NEGATIVE 457 260 214 56 4 NC_002950:PG1859|5end_glycerate_kinase_family_protein_1958334..1958564_NEGATIVE 453 750 705 123 61 NC_002950:PG1494|5end_hypothetical_protein_1569841..1570071_POSITIVE 451 870 823 211 157 NC_002950:PG1719|5end_ABC_transporter,_ATP-binding_protein,_MsbA_family_1806749..1806979_POSITIVE 449 1308 1261 87 30 NC_002950:PG1954|5end_NAD_dependent_epimerase/reductase-related_protein_2044513..2044743_POSITIVE 448 1630 1586 72 39 NC_002950:PG0285|5end_hypothetical_protein_318459..318689_POSITIVE 448 88 41 221 180 NC_002950:PG0221|5end_hypothetical_protein_255834..256064_NEGATIVE 446 423 384 48 4 NC_002950:PG0434|5end_hypothetical_protein_472513..472743_NEGATIVE 442 546 502 56 13 NC_002950:PG2227|5end_hypothetical_protein_2342008..2342238_POSITIVE 440 865 826 152 100 NC_002950:PG1790|5end_hypothetical_protein_1880954..1881184_NEGATIVE 438 315 271 113 55 NC_002950:PG0877|5end_hypothetical_protein_941545..941775_NEGATIVE 437 779 731 98 39 NC_002950:PG1035|5end_hypothetical_protein_1096875..1097105_POSITIVE 436 750 703 69 2 NC_002950:PG1778|5end_hypothetical_protein_1867054..1867284_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 508 849 803 39 1 NC_002950:PG0639|3end_signal_peptide_peptidase_SppA,_67K_type_691213..691363_NEGATIVE 501 830 782 78 21 NC_002950:PG0332|3end_transcription_termination_factor_Rho_367675..367825_POSITIVE 491 329 285 88 42 NC_002950:PG1975|3end_hemagglutinin_protein_HagC_2064350..2064500_POSITIVE 483 77 32 145 98 NC_002950:PG0443|3end_hemagglutinin-related_protein_483147..483297_POSITIVE 477 1300 1251 117 49 NC_002950:PG0745|3end_lactoylglutathione_lyase,_putative_791982..792132_NEGATIVE 458 1300 1253 80 37 NC_002950:PG0523|3end_inositol-5-monophosphate_dehydrogenase_566898..567048_NEGATIVE 449 1308 1261 83 26 NC_002950:PG1953|3end_YitT_family_protein_2044589..2044739_POSITIVE 448 88 41 142 101 NC_002950:PG0222|3end_DNA-binding_protein,_histone-like_family_255913..256063_NEGATIVE 442 546 502 59 16 NC_002950:PG2226|3end_hypothetical_protein_2342091..2342241_POSITIVE 437 779 731 120 61 NC_002950:PG1034|3end_ABC_transporter,_ATP-binding_protein_1096977..1097127_POSITIVE 435 86 41 137 101 NC_002950:PG2040|3end_DNA-binding_protein,_histone-like_family_2138398..2138548_NEGATIVE 433 440 400 131 96 NC_002950:PG2117|3end_30S_ribosomal_protein_S16_2225235..2225385_NEGATIVE 432 429 381 135 78 NC_002950:PG0134|3end_magnesium_transporter_155783..155933_NEGATIVE 431 1199 1151 78 28 NC_002950:PG1391|3end_hypothetical_protein_1472961..1473111_POSITIVE 431 1436 1392 124 76 NC_002950:PG0400|3end_hypothetical_protein_436245..436395_NEGATIVE 430 1049 1001 128 68 NC_002950:PG1174|3end_thioesterase_family_protein_1253210..1253360_NEGATIVE 428 89 41 144 98 NC_002950:PG1497|3end_DNA-binding_protein,_histone-like_family_1574635..1574785_POSITIVE 427 870 823 112 59 NC_002950:PG0767|3end_4-alpha-glucanotransferase_818557..818707_NEGATIVE 426 1300 1253 143 73 NC_002950:PG1972|3end_hemagglutinin_protein_HagB_2061203..2061353_POSITIVE 419 276 233 116 72 NC_002950:PG1675|3end_hypothetical_protein_1760360..1760510_POSITIVE