Origin IGS: gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 atttctattgttttctccattataaaaacataatttttctcttgaccaatgagcaactcgaaatagtgaagttggtttgactttgcgaatatactttatttggagatgttatacatctttttgcgtgtcttgtggactatacatgcgttgggtgagtaatcatttataaagtctgactattaggagttcggaatctcttcctgtcctgaaactctatatacttctaaaagcaaaatatagacctttatcagtattgatggagaatccaaaacacacacgaaaaaagttttcaacaacgaagatgagtttggaatcattccaaataagaacctaaatacatctcaattttgaagtcaaaaaggtgagaaaaggatgtttttcaggtagaaacatgacttttagaagagaagataacgatctatatacaaacggtttacgataaatatatagttcgtttgcgatttgtatataaatcgttttcaatttatacatagatcgaaactcatttctatataaatcgcaggctgaaaaaggtcggtttgggcagtgataaaacaaaggcacccaccaaattctacagggaactcggtgggtgccttatatgtttgaggagactatggaagccttattcttctttattcgtcatagagatattcttgcttagtccgaatagtgcagtggtatgacagacacggatggggtaaaatcggcctgatgaaaaagggaatgatgtatgaaagctgtgtgcatattcgttgtcatttagtcgtaaactatttgtcatattgttctatatcaagcagataaactcttccttcaagaactacatcctcttggtgggtgctttgtgggccggcaaatatagcaaaaacctccaaccatggggaatcgaattttgcatctcgaatcttccatttcccaatctgtcgcgctatgctgtaatcttaaaagaattttcagcattctcacggcccggagcataatcaaacggctcgggaagatgagaaaaaacgctacttttgtattagtgaacacggtggaagggcatactcttcctccgtgcaatcccacaggattcatttcaactatgatgagaacgac Mask Tandem Repeat Region ================================================ gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Find is-nt database================================================ Query_seq: PG0965:PG0968|PG0965:PG0968:phosphatidylserine decarboxylase:Mrr restriction system protein:<-->:1025867..1026967 1101 gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG0965:PG0968|PG0965:PG0968:phosphatidylserine decarboxylase:Mrr restriction system protein:<-->:1025867..1026967 1101 gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG0965:PG0968|PG0965:PG0968:phosphatidylserine decarboxylase:Mrr restriction system protein:<-->:1025867..1026967 1101 gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Predict ORF larger than 30AA ================================================ Protein_Len: 32 Strand: + Start: 180 End: 275 ................................................................................................................................................................................... M G N G R F E M Q N S I P H G W R F L L Y L P A H K A P T K R M .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 10 End: 282 ......... M I V E M N P V G L H G G R V C P S T V F T N T K V A F F L I F P S R L I M L R A V R M L K I L L R L Q H S A T D W E M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 53 Strand: + Start: 167 End: 325 ...................................................................................................................................................................... M A R Q I G K W K I R D A K F D S P W L E V F A I F A G P Q S T H Q E D V V L E G R V Y L L D I E Q Y D K ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 33 Strand: + Start: 340 End: 438 ................................................................................................................................................................................................................................................................................................................................................... M T T N M H T A F I H H S L F H Q A D F T P S V S V I P L H Y S D ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 38 Strand: + Start: 350 End: 463 ............................................................................................................................................................................................................................................................................................................................................................. M C T Q L S Y I I P F F I R P I L P H P C L S Y H C T I R T K Q E Y L Y D E .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 52 Strand: + Start: 318 End: 473 ............................................................................................................................................................................................................................................................................................................................. M T N S L R L N D N E Y A H S F H T S F P F S S G R F Y P I R V C H T T A L F G L S K N I S M T N K E E .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 529 End: 768 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M W W V P L F Y H C P N R P F S A C D L Y R N E F R S M Y K L K T I Y I Q I A N E L Y I Y R K P F V Y R S L S S L L K V ............................................................................................................................................................................................................................................................................................................................................. Protein_Len: 36 Strand: + Start: 778 End: 885 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M W N D S K L I F V V E N F F R V C F G F S I N T D K G L Y F A F R S I ........................................................................................................................................................................................................................ Protein_Len: 45 Strand: + Start: 785 End: 919 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M I P N S S S L L K T F F V C V L D S P S I L I K V Y I L L L E V Y R V S G Q E E I P N S ...................................................................................................................................................................................... Protein_Len: 30 Strand: + Start: 990 End: 1079 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M T S P N K V Y S Q S Q T N F T I S S C S L V K R K I M F L ...................... Protein_Len: 30 Strand: + Start: 1010 End: 1099 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M F A K S N Q L H Y F E L L I G Q E K N Y V F I M E K T I E .. Protein_Len: 33 Strand: + Start: 1003 End: 1101 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M K Y I R K V K P T S L F R V A H W S R E K L C F Y N G E N N R N Protein_Len: 30 Strand: - Start: 936 End: 1025 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... L H N S V W R M Y L G C S V C F S T Y C R W I F Y I R L T M ............................................................................ Protein_Len: 53 Strand: - Start: 771 End: 929 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. T R I Q F S E L S M K T T S F K K R T H K P N E M L V S L P R Y K A K L L I Y L K L V P L S E S S R I T M ............................................................................................................................................................................ Protein_Len: 34 Strand: - Start: 754 End: 855 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. F Q S T N L N K N P I I G F E D E N N F V K K T H T K S E G D I S M ...................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: - Start: 663 End: 767 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R L G N T Y L D N D E R R F T M N R G S F C G K R V K K V E F N L H M .............................................................................................................................................................................................................................................................................................................................................. Protein_Len: 30 Strand: - Start: 441 End: 530 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................ A L I D R H R I F F F L A E M T E E F M Y P V W R T G Q L M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 419 End: 607 .................................................................................................................................................................................................................................................................................................................................................................................................................................. S N P S L L F I E I V F L S S Y P K W L R R L C I L C G G L E R Y F K T P A K T K D S G L G V K K L R R N I Y F H T E M .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 45 Strand: - Start: 298 End: 432 ......................................................................................................................................................................................................................................................................................................... R S S I S C Y S L Y N V V L H C R I H V C S E Y M M G K K M L G I K G W G H R D Y W Q V M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 33 Strand: - Start: 163 End: 261 .................................................................................................................................................................. L M A R C I P F H F I R S A F N S E G H N S T K A I N A P G C L M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 122 End: 361 ......................................................................................................................... P F P L N S I C F E I G W P Q L N K S Y K G A W L A G V L L I Y N K F S S N I Q K I Y F L I V F L K R S F S L S Y A C M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 3 End: 221 .. P P L T H G E V T N V L V F T A N K R M K G L R K I I S R A T L I S F I R K L N C C L A V S Q S I S S E L H L I R N G M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Predict TransTerm conf > 70================================================ TransTerm Strand: + Conf: 87 HP_score: -12.1 Tail_Score: -3.09516 Start: 40 End: 69 Full_Region: AATCCTGTGGGATTG CACGGAGGAAGAG TATG CCCTTCCACCGTG TTCACTAATACAAAA .......................................CACGGAGGAAGAGTATGCCCTTCCACCGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 70 HP_score: -8.9 Tail_Score: -3.10796 Start: 42 End: 67 Full_Region: TCCTGTGGGATTGCA CGGAGGAAGAG TATG CCCTTCCACCG TGTTCACTAATACAA .........................................CGGAGGAAGAGTATGCCCTTCCACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 100 HP_score: -18.6 Tail_Score: -4.7878 Start: 505 End: 542 Full_Region: TCCTCAAACATATAA GGCACCCACCGAGTTC CCTGTA GAATTTGGTGGGTGCC TTTGTTTTATCACTG ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACCCACCGAGTTCCCTGTAGAATTTGGTGGGTGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 100 HP_score: -14.9 Tail_Score: -3.76232 Start: 505 End: 542 Full_Region: cagtgataaaacaaa ggcacccaccaaattct acag ggaactcggtgggtgcc ttatatgtttgagga ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggcacccaccaaattctacagggaactcggtgggtgcc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: - Conf: 77 HP_score: -6.3 Tail_Score: -4.74453 Start: 985 End: 997 Full_Region: tatactttatttgga gatgt tat acatc tttttgcgtgtcttg ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................gatgttatacatc........................................................................................................ Find igs database================================================ Query_seq: PG0965:PG0968|PG0965:PG0968:phosphatidylserine decarboxylase:Mrr restriction system protein:<-->:1025867..1026967 1101 gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Intra-Species Hit: Count: 9 Min: 1 Max: 1101 Len: 1101 Subject: NC_002950_PG0965_PG0968|phosphatidylserine decarboxylase:Mrr restriction system protein|NEGATIVE:POSITIVE|[1025867,1026967]|1101 HSP 1 e-value: 0.0 bit: 2183.0 Len: 1101 Query Start:1 Query End:1101 Subject Strand: POSITIVE Subject Start: 1 Subject End: 1101 gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat gtcgttctcatcatagttgaaatgaatcctgtgggattgcacggaggaagagtatgcccttccaccgtgttcactaatacaaaagtagcgttttttctcatcttcccgagccgtttgattatgctccgggccgtgagaatgctgaaaattcttttaagattacagcatagcgcgacagattgggaaatggaagattcgagatgcaaaattcgattccccatggttggaggtttttgctatatttgccggcccacaaagcacccaccaagaggatgtagttcttgaaggaagagtttatctgcttgatatagaacaatatgacaaatagtttacgactaaatgacaacgaatatgcacacagctttcatacatcattccctttttcatcaggccgattttaccccatccgtgtctgtcataccactgcactattcggactaagcaagaatatctctatgacgaataaagaagaataaggcttccatagtctcctcaaacatataaggcacccaccgagttccctgtagaatttggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaacttttttcgtgtgtgttttggattctccatcaatactgataaaggtctatattttgcttttagaagtatatagagtttcaggacaggaagagattccgaactcctaatagtcagactttataaatgattactcacccaacgcatgtatagtccacaagacacgcaaaaagatgtataacatctccaaataaagtatattcgcaaagtcaaaccaacttcactatttcgagttgctcattggtcaagagaaaaattatgtttttataatggagaaaacaatagaaat Subject: NC_002950_PG1411_PG1414|potassium uptake protein TrkA, putative:hypothetical protein|NEGATIVE:POSITIVE|[1495257,1497148]|1892 HSP 1 e-value: 7.0E-44 bit: 180.0 Len: 127 Query Start:568 Query End:694 Subject Strand: NEGATIVE Subject Start: 1211 Subject End: 1337 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatctt....................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cctttttcggtcttcgatttatatacaaatgagtttcgatctatatataaattgaaaatgatttatatacaaatcgaaaacgatctatatatttatcgtaaacagtttgtatatagatcgttatctt....................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG1167_PG1169|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1248705,1249172]|468 HSP 1 e-value: 4.0E-27 bit: 125.0 Len: 147 Query Start:568 Query End:714 Subject Strand: NEGATIVE Subject Start: 37 Subject End: 183 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatatttatcgtaaaccgtttgtatatagatcgttatcttctcttctaaaagtcatgttt................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cctttttcagcctctgatttatatagaaaagacttccgatctatatataaatggaaaacgatttatatataaaacgaaaacgatctatatatagatcgaaaacggtttatatacagatcgttatcctctcttctgaaaagcatgttt................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG1375_PG1378|hypothetical protein:A/G-specific adenine glycosylase|POSITIVE:NEGATIVE|[1456804,1457804]|1001 HSP 1 e-value: 1.0E-14 bit: 83.8 Len: 146 Query Start:677 Query End:822 Subject Strand: NEGATIVE Subject Start: 321 Subject End: 465 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatatagatcgttatcttctcttctaaaagtcatgtttctacctgaaaaacatccttttctcacctttttgacttcaaaattgagatgtatttaggttcttatttggaatgattccaaactcatcttcgttgttgaaaactttttt....................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tatacagatcgttttcttatctctcaaaagtcatgtttcgatctgaaaaagttcgttt-ctcacttttttgtcttcaaaatccgtttccatttacgtgcttatttggaatgattctaaactcatcttcattgttgaaaactttttt....................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG1145_PG1148|long-chain-fatty-acid--CoA ligase, putative:hypothetical protein|NEGATIVE:POSITIVE|[1230396,1231343]|948 HSP 1 e-value: 5.0E-14 bit: 81.8 Len: 53 Query Start:770 Query End:822 Subject Strand: POSITIVE Subject Start: 833 Subject End: 885 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aggttcttatttggaatgattccaaactcatcttcgttgttgaaaactttttt....................................................................................................................................................................................................................................................................................... .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aggtgcttatttggaatcattccaaactcgtcttcgttgttgaaaactttttt....................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-7 bit: 60.0 Len: 62 Query Start:568 Query End:629 Subject Strand: POSITIVE Subject Start: 653 Subject End: 714 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgat........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cctttttcggcctgcgatttatatacaaatcactttcaagctatatataaatggaaaacgat........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_002950_PG0404_PG0408|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[440197,441041]|845 HSP 1 e-value: 2.0E-13 bit: 79.8 Len: 48 Query Start:775 Query End:822 Subject Strand: POSITIVE Subject Start: 628 Subject End: 675 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatttggaatgattccaaactcatcttcgttgttgaaaactttttt....................................................................................................................................................................................................................................................................................... ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cttatttggaatcattccaaactcgtcttcgttgttgaaaactttttt....................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-7 bit: 58.0 Len: 61 Query Start:576 Query End:636 Subject Strand: POSITIVE Subject Start: 429 Subject End: 489 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatata................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................agcctgcgatttatatacgaatcacttacgatctatatatttattgaaaacgatttatata................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_002950_PG0773_PG0774|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[825409,825786]|378 HSP 1 e-value: 3.0E-12 bit: 75.8 Len: 126 Query Start:533 Query End:658 Subject Strand: NEGATIVE Subject Start: 54 Subject End: 179 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatata........................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggtgggtgccttcgttttatcatatctctaaccgaactttttctgcttatgatttatatataaattgcttacgatctgtatatttattgaaaacgatttatatacaaatcgaaaacgatctatata........................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG1119_PG1121|flavodoxin, putative:asparaginyl-tRNA synthetase|POSITIVE:NEGATIVE|[1195544,1196235]|692 HSP 1 e-value: 4.0E-8 bit: 61.9 Len: 47 Query Start:776 Query End:822 Subject Strand: NEGATIVE Subject Start: 160 Subject End: 206 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatttggaatgattccaaactcatcttcgttgttgaaaactttttt....................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ttatttagaatgattccaaacttgtcttcgttgttgaaaagtttttt....................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-6 bit: 56.0 Len: 76 Query Start:584 Query End:659 Subject Strand: NEGATIVE Subject Start: 323 Subject End: 398 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatat.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................atttatatataaacgagttttgatttatatatttattgaaaacgatttgtatataaatcgaaaacgatctgtatat.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG0994_PG0995|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[1055160,1055558]|399 HSP 1 e-value: 4.0E-8 bit: 61.9 Len: 127 Query Start:533 Query End:659 Subject Strand: POSITIVE Subject Start: 187 Subject End: 313 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggtgggtgcctttgttttatcactgcccaaaccgacctttttcagcctgcgatttatatagaaatgagtttcgatctatgtataaattgaaaacgatttatatacaaatcgcaaacgaactatatat.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggtgggtgcatttgttttatcacctcccgaatcggccttttttatcctgcaatttatgtataaatcatttatgatctatatatttattgaaaacgttttatatataaatctaaaacaatctatatat.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GUCGUUCUCAUCAUAGUUGAAAUGAAUCCUGUGGGAUUGCACGGAGGAAGAGUAUGCCCUUCCACCGUGUUCACUAAUACAAAAGUAGCGUUUUUUCUCAUCUUCCCGAGCCGUUUGAUUAUGCUCCGGGCCGUGAGAAUGCUGAAAAUUCUUUUAAGAUUACAGCAUAGCGCGACAGAUUGGGAAAUGGAAGAUUCGAGAUGCAAAAUUCGAUUCCCCAUGGUUGGAGGUUUUUGCUAUAUUUGCCGGCCCACAAAGCACCCACCAAGAGGAUGUAGUUCUUGAAGGAAGAGUUUAUCUGCUUGAUAUAGAACAAUAUGACAAAUAGUUUACGACUAAAUGACAACGAAUAUGCACACAGCUUUCAUACAUCAUUCCCUUUUUCAUCAGGCCGAUUUUACCCCAUCCGUGUCUGUCAUACCACUGCACUAUUCGGACUAAGCAAGAAUAUCUCUAUGACGAAUAAAGAAGAAUAAGGCUUCCAUAGUCUCCUCAAACAUAUAAGGCACCCACCGAGUUCCCUGUAGAAUUUGGUGGGUGCCUUUGUUUUAUCACUGCCCAAACCGACCUUUUUCAGCCUGCGAUUUAUAUAGAAAUGAGUUUCGAUCUAUGUAUAAAUUGAAAACGAUUUAUAUACAAAUCGCAAACGAACUAUAUAUUUAUCGUAAACCGUUUGUAUAUAGAUCGUUAUCUUCUCUUCUAAAAGUCAUGUUUCUACCUGAAAAACAUCCUUUUCUCACCUUUUUGACUUCAAAAUUGAGAUGUAUUUAGGUUCUUAUUUGGAAUGAUUCCAAACUCAUCUUCGUUGUUGAAAACUUUUUUCGUGUGUGUUUUGGAUUCUCCAUCAAUACUGAUAAAGGUCUAUAUUUUGCUUUUAGAAGUAUAUAGAGUUUCAGGACAGGAAGAGAUUCCGAACUCCUAAUAGUCAGACUUUAUAAAUGAUUACUCACCCAACGCAUGUAUAGUCCACAAGACACGCAAAAAGAUGUAUAACAUCUCCAAAUAAAGUAUAUUCGCAAAGUCAAACCAACUUCACUAUUUCGAGUUGCUCAUUGGUCAAGAGAAAAAUUAUGUUUUUAUAAUGGAGAAAACAAUAGAAAU ((((((((..(((....)))...(((((..(((((...((((((.(((((.(....).))))).))))))..............((.(((((..(((((((...(((((((.((......))))).))))..))))))).((((.....(((....)))...))))..))))).))....((((...(((.((((.......((((((.......(((((....))).)).))))))...)))).))).)))).......)))))..(((((((((.(((((((..(((.(.((..(((.(((((((..((((....((((....(((((...))))).........(((...((.....)).))).....))))....))))..))))))).)))...))..).)))..(((((..................)))))....))))))).....((((((......((((((...((((.....((((......(((((...((((((((((((((((((......)))))))))))))))))))))))....))))........((......)).))))((((((((((((.(((((.((((((((..(((((((..(((....((((((......))))))....)))..)))))))..)))).))))))))).)))))))))))).......))))))....))))))..............)))))))))(((((...(((((....))))).)))))........)))))......))))))))..........((((((((((.((((((.((((((.(((((((((((........((((....))))...((.((((((..(((...........((((((((((.((((..((((....))))....)))).......))))))))))..(((....)))......))).)))))).)).)))))))))))...(((((.....)))))((((....((((.(((((.(((((.((......)).))).)).)))))))))..))))......))))))....))))))))))))))))............. (-288.07) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUUUCUAUUGUUUUCUCCAUUAUAAAAACAUAAUUUUUCUCUUGACCAAUGAGCAACUCGAAAUAGUGAAGUUGGUUUGACUUUGCGAAUAUACUUUAUUUGGAGAUGUUAUACAUCUUUUUGCGUGUCUUGUGGACUAUACAUGCGUUGGGUGAGUAAUCAUUUAUAAAGUCUGACUAUUAGGAGUUCGGAAUCUCUUCCUGUCCUGAAACUCUAUAUACUUCUAAAAGCAAAAUAUAGACCUUUAUCAGUAUUGAUGGAGAAUCCAAAACACACACGAAAAAAGUUUUCAACAACGAAGAUGAGUUUGGAAUCAUUCCAAAUAAGAACCUAAAUACAUCUCAAUUUUGAAGUCAAAAAGGUGAGAAAAGGAUGUUUUUCAGGUAGAAACAUGACUUUUAGAAGAGAAGAUAACGAUCUAUAUACAAACGGUUUACGAUAAAUAUAUAGUUCGUUUGCGAUUUGUAUAUAAAUCGUUUUCAAUUUAUACAUAGAUCGAAACUCAUUUCUAUAUAAAUCGCAGGCUGAAAAAGGUCGGUUUGGGCAGUGAUAAAACAAAGGCACCCACCAAAUUCUACAGGGAACUCGGUGGGUGCCUUAUAUGUUUGAGGAGACUAUGGAAGCCUUAUUCUUCUUUAUUCGUCAUAGAGAUAUUCUUGCUUAGUCCGAAUAGUGCAGUGGUAUGACAGACACGGAUGGGGUAAAAUCGGCCUGAUGAAAAAGGGAAUGAUGUAUGAAAGCUGUGUGCAUAUUCGUUGUCAUUUAGUCGUAAACUAUUUGUCAUAUUGUUCUAUAUCAAGCAGAUAAACUCUUCCUUCAAGAACUACAUCCUCUUGGUGGGUGCUUUGUGGGCCGGCAAAUAUAGCAAAAACCUCCAACCAUGGGGAAUCGAAUUUUGCAUCUCGAAUCUUCCAUUUCCCAAUCUGUCGCGCUAUGCUGUAAUCUUAAAAGAAUUUUCAGCAUUCUCACGGCCCGGAGCAUAAUCAAACGGCUCGGGAAGAUGAGAAAAAACGCUACUUUUGUAUUAGUGAACACGGUGGAAGGGCAUACUCUUCCUCCGUGCAAUCCCACAGGAUUCAUUUCAACUAUGAUGAGAACGAC .......((((((((..((....((((((((..((((((((...(((......(((((((......)).))))).(((((((((.((((((.....))))))(((((((....((((((((((.((((.((.(((((((((..(((..(((((((....))))))).............((((((....((((....))))..))))))....................)))...)))))..(((((((......)))))))..)))).)).))))..((((.....))))..))).))))))).(((((((.....)))))))............)))))))......)))))))))..))))))))))).))))))))..(((.((((....(((..((.(((((.((..(((((.(((((((....((.....)).....))))))).)))))(((((((((((((.((((.(.((((.(((((....))))).)))).).)))).))))))))))))).((((((((...((((.((((((((.((((.....((((((((((((...((((....))))...)))))))))))).((((...(((((((.((.((...)).)).))))))).......))))....)))).)))))))).))))....((((((((..(((((((...((.((((((.....((((..(((((...((.(((((.(((((.........)))))))))).)).)))))..)))).....((((((((.....(..(((((..(((((..........(((.((((((.........)))))).)))))))))))))..)))))))))........))).))).)).((((((((.(((.((((.....))))..))).)))))))).)))))))..))..))))))............)))))))).(((((((..((((.(((...........)))))))..).))))))......)).))))).))..)))...(((((.(((((((....))))))).))))).(((((....)))))..)))).))).))..)))))))). (-310.60) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1018 70 21 161 112 NC_002950:PG0965|5end_phosphatidylserine_decarboxylase_1025776..1026006_NEGATIVE 547 820 773 62 15 NC_002950:PG0773|5end_hypothetical_protein_825131..825361_POSITIVE 540 820 771 117 68 NC_002950:PG0609|5end_hypothetical_protein_663183..663413_POSITIVE 527 829 781 59 11 NC_002950:PG0995|5end_hypothetical_protein_1055585..1055815_NEGATIVE 505 820 775 80 35 NC_002950:PG1357|5end_hypothetical_protein_1436458..1436688_NEGATIVE 482 545 506 43 1 NC_002950:PG0371|5end_hypothetical_protein_404043..404273_POSITIVE 476 620 571 156 107 NC_002950:PG1223|5end_hypothetical_protein_1299461..1299691_POSITIVE 441 558 515 46 5 NC_002950:PG1574|5end_hypothetical_protein_1652613..1652843_NEGATIVE 404 255 212 193 145 NC_002950:PG1352|5end_hypothetical_protein_1433150..1433380_NEGATIVE 401 540 492 135 86 NC_002950:PG1695|5end_hypothetical_protein_1779440..1779670_POSITIVE 397 828 800 31 3 NC_002950:PG1167|5end_hypothetical_protein_1248427..1248657_POSITIVE 394 132 97 133 87 NC_002950:PG0039|5end_hypothetical_protein_47637..47867_POSITIVE 390 143 106 57 17 NC_002950:PG0195|5end_rubrerythrin_232046..232276_POSITIVE 384 570 522 150 102 NC_002950:PG1354|5end_hydrolase,_carbon-nitrogen_family_1434765..1434995_NEGATIVE 384 439 403 126 88 NC_002950:PG1172|5end_iron-sulfur_cluster_binding_protein,_putative_1251173..1251403_POSITIVE 379 140 107 39 6 NC_002950:PG1186|5end_hypothetical_protein_1269151..1269381_NEGATIVE 367 136 101 32 5 NC_002950:PG1919|5end_ribosomal_protein_L15_2016281..2016511_NEGATIVE 367 137 94 175 136 NC_002950:PG0167|5end_ribosomal_protein_L25_189090..189320_NEGATIVE 359 437 391 71 25 NC_002950:PG1434|5end_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_1519022..1519252_POSITIVE 358 220 171 51 3 NC_002950:PG1553|5end_CobN/magnesium_chelatase_family_protein_1630858..1631088_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 656 820 771 51 2 NC_002950:PG1868|3end_hypothetical_protein_1965098..1965248_NEGATIVE 547 820 773 55 8 NC_002950:PG0772|3end_hypothetical_protein_825204..825354_POSITIVE 524 550 501 59 8 NC_002950:PG1274|3end_elongation_factor_P_1352489..1352639_POSITIVE 507 710 662 50 2 NC_002950:PG1167|3end_hypothetical_protein_1248644..1248794_POSITIVE 482 545 506 144 102 NC_002950:PG0371|3end_hypothetical_protein_404224..404374_POSITIVE 452 144 101 83 34 NC_002950:PG0334|3end_glycosyl_transferase,_group_2_family_protein_368792..368942_NEGATIVE 446 643 604 44 5 NC_002950:PG0773|3end_hypothetical_protein_825348..825498_POSITIVE 407 520 472 150 93 NC_002950:PG0492|3end_hypothetical_protein_534408..534558_NEGATIVE 404 255 212 142 94 NC_002950:PG1353|3end_orotate_phosphoribosyltransferase_1433201..1433351_NEGATIVE 386 579 533 69 14 NC_002950:PG0062|3end_TPR_domain_protein_75810..75960_POSITIVE 384 439 403 48 10 NC_002950:PG1171|3end_oxidoreductase,_putative_1251175..1251325_POSITIVE 383 568 522 149 105 NC_002950:PG1355|3end_acyltransferase,_putative_1434762..1434912_NEGATIVE 376 68 27 138 101 NC_002950:PG1174|3end_thioesterase_family_protein_1253210..1253360_NEGATIVE 370 660 611 51 2 NC_002950:PG1357|3end_hypothetical_protein_1436327..1436477_NEGATIVE 368 550 501 59 8 NC_002950:PG0568|3end_elongation_factor_P_623999..624149_NEGATIVE 366 139 95 126 70 NC_002950:PG0143|3end_hydrolase,_carbon-nitrogen_family_165747..165897_NEGATIVE 365 251 213 67 22 NC_002950:PG1330|3end_large_conductance_mechanosensitive_channel_protein_1410165..1410315_POSITIVE 362 147 102 68 22 NC_002950:PG1657|3end_methylmalonyl-CoA_mutase_1741571..1741721_POSITIVE 359 437 391 95 49 NC_002950:PG1433|3end_hydrolase_1519126..1519276_POSITIVE 347 137 108 88 50 NC_002950:PG0328|3end_imidazolonepropionase_362155..362305_NEGATIVE