Origin IGS: ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatggagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggctcagccgtcttggcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaacgaaacaaagcaatcagtcggatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatttgtaggataaggcataaccccccttgaggagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctcaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacaacgttgcgtatatagggaaggaaatttccgtatataagaaaatttatttccgtatatacacaaatttatttccgtatatacgaaaaaatatttccgcatatgcggaaatttcgctaccttcgtggtgcgataaaatagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 aatgaacttgattagctggttattaaatactttactgtctcgatttgattgctattttatcgcaccacgaaggtagcgaaatttccgcatatgcggaaatattttttcgtatatacggaaataaatttgtgtatatacggaaataaattttcttatatacggaaatttccttccctatatacgcaacgttgttatactcctttcgtaatagatagggtacctatgtatttaggattatccgattatccgattctccaaataccacccgaatattgccatcttgagacctttgaaaaataaggagatggagtaaagaggagttcttggcaaaaaaggagcgagtgaaaggggtggcagtaaggagtgaaagtagttgtaaatccccccttgaggagctgcttgcacgagctcctcaaggggggttatgccttatcctacaaatgaggacataattatccccggggttctgtataaattaaaggcgatgctttcaagaatgttttgagtatgggtcttggcaagtccccggtatcgacatcgtccgccatgaaaccaccggcgaatactgccaaaggtgcgttcgatggtgctccgtatccgactgattgctttgtttcgttgcttctcttcctcggtcaatgccctgttgcgttgtgccttgtgcatgatgccgtcttgaaggtgatgggtttgcaggtaggaacgattttccccgcaagcatatcctttgtccgccaagacggctgagccttgaggtatgtttgcaccctgcaatagcgcaataaactccttcgtgtcactgcggttcgctgcagtcgttatcaccttttgaacaatgccttgaacattggtcagacaatgctttttgtatccgtagtgataacgcttttgtttgtaaacccaacgggcttcttcatccgtccctttacgctgacggacaacctgtttttgataatcctcctctgcctctttttcctcctcgctccgattgtcttctctgtcgtctgcgacttcaatcgtaatgcttccgttgggtttatgcggcgtctccacaaggcttgcatcgacaagcaccccttccctgaccgaaatgtgatggcgggaaagttgtttgttaaactgcgccaatagtttgtccatgagccccaactctgtcagtgccgaacgaaatcgactgatggtgctgtggtcgggagatacctcttccatagccccaagaatcgggaaaaggtgattgaatcattgatgcgctcctccaaagcacaatcactgaggttgtaccatgtctccaaaagcaacatcttgaataagagaatcacgtcataagccggggcgccgatggcattttgtcgcttggtgtatttcttgttgatcagcgtcctgatcggacgccaatcgataagcctctcaacctgattgaggaagtcgttttgtgctttgcgataacgctttgaaaggagtgcgtctgcaaatgttacatgctcatcggtattcttggattggtatgccatgggaggaatattatgctgtttttaatactcaaatatacaaaataactccctattatacaatgaattaacaaacaaaatatacgccaatcgccgtgcaaaggtctccattgaaagcctgcaactccgcttccgtcacatcatactattatatgattctgacgatacaggggtacgtgaagctcgccgacaa Mask Tandem Repeat Region ================================================ ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatggagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggctcagccgtcttggcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaacgaaacaaagcaatcagtcggatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatttgtaggataaggcataaccccccttgaggagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctcaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacaacgttgcgtatatagggaaggaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcggaaatttcgctaccttcgtggtgcgataaaatagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Find is-nt database================================================ Query_seq: PG0851:PG0853|PG0851:PG0853:hypothetical protein:DNA-binding protein, histone-like family:<-->:912823..914523 1701 ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatggagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggctatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaacccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtctgaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggctcagccgtcttggcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaacgaaacaaagcaatcagtcggatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatttgtaggataaggcataaccccccttgaggagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctcaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacaacgttgcgtatatagggaaggaaatttccgtatataagaaaatttatttccgtatatacacaaatttatttccgtatatacgaaaaaatatttccgcatatgcggaaatttcgctaccttcgtggtgcgataaaatagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 86 Max: 1419 Len: 1334 Subject: IS|IS1126 HSP 1 e-value: 0.0 bit: 2290.0 Len: 1334 Query Start:86 Query End:1419 Subject Strand: POSITIVE Subject Start: 1 Subject End: 1336 .....................................................................................gagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataatagggagttattttgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacgctgatcaacaagaaatacaccaagcgacaaaatgccatcggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttggggct----atggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggggctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccgcataaa-cccaacggaagcattacgattgaagtcgcagacgacagagaagacaatcggagcgaggaggaaaaagaggcagaggaggattatcaaaaacaggttgtccgtcagcgtaaagggacggatgaagaagcccgttgggtttacaaacaaaagcgttatcactacggatacaaaaagcattgtct-gaccaatgttcaaggcattgttcaaaaggtgataacgactgcagcgaaccgcagtgacacgaaggagtttattgcgctattgcagggtgcaaacatacctcaaggctcagccgtcttggcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaacgaaacaaagcaatcagtcggatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatttgtaggataaggcataaccccccttgaggagctcgtgcaagcagctcctcaaggggggatttacaactactttcactccttactgccacccctttcactcgctccttttttgccaagaactcctctttactccatctccttatttttcaaaggtctc.......................................................................................................................................................................................................................................................................................... .....................................................................................gagacctttgcacggcgattggcgtatattttgtttgttaattcattgtataataggaagttatttcgtatatttgagtattaaaaacagcataatattcctcccatggcataccaatccaagaataccgatgagcatgtaacatttgcagacgcactcctttcaaagcgttatcgcaaagcacaaaacgacttcctcaatcaggttgagaggcttatcgattggcgtccgatcaggacg-tgatcaacaagaaatacacgaagcgacaaaatgccat-ggcgccccggcttatgacgtgattctcttattcaagatgttgcttttggagacatggtacaacctcagtgattgtgctttggaggagcgcatcaatgattcaatcaccttttcccgattcttgggactgaagatggaagaggtatctcccgaccacagcaccatcagtcgatttcgttcggcactgacagagttggg-ctcatggacaaactattggcgcagtttaacaaacaactttcccgccatcacatttcggtcagggaaggggtgcttgtcgatgcaagccttgtggagacgccacataaagcccaacggaaccattacgattgaagtcgcagcgaacagagaagacaatcggagcgaggcggaaaaagaggacgaggaggattatcaaaaacaggttgtccgccggcgtaaagggacggatgaagaagcc-gttgggtgtacaaacaaaagcgttatcactacggatacaaaaagcattgtcttgaccaatgttcaaggcattgttcaaaaggtgataacgacagcagcgaaccgcagtgacacgaaggagtttattccgctattgcagggtgcaaacatacctcaaggcacagccgtcttggcggacaaaggatatgcttgcggggaaaatcgttcctacctgcaaacccatcaccttcaagacggcatcatgcacaaggcacaacgcaacagggcattgaccgaggaagagaagcaaggaaacaaagcaatcagtccgatacggagcaccatcgaacgcacctttggcagtattcgccggtggtttcatggcggacgatgtcgataccggggacttgccaagacccatactcaaaacattcttgaaagcatcgcctttaatttatacagaaccccggggataattatgtcctcatctctaggataaggcataaccccccttgaggagctcgtgcaagtacgtccgcaaggggggatttacaactactttcactccttactgccacccttttcactcgctccttttttgccaagaactcctcttccctccatctccttattttgcaaaggtctc.......................................................................................................................................................................................................................................................................................... Find is-aa database================================================ Query_seq: PG0851:PG0853|PG0851:PG0853:hypothetical protein:DNA-binding protein, histone-like family:<-->:912823..914523 1701 ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacaacgttgcgtatatagggaaggaaatttccgtatataagaaaatttatttccgtatatacacaaatttatttccgtatatacgaaaaaatatttccgcatatgcggaaatttcgctaccttcgtggtgcgataaaatagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG0851:PG0853|PG0851:PG0853:hypothetical protein:DNA-binding protein, histone-like family:<-->:912823..914523 1701 ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacaacgttgcgtatatagggaaggaaatttccgtatataagaaaatttatttccgtatatacacaaatttatttccgtatatacgaaaaaatatttccgcatatgcggaaatttcgctaccttcgtggtgcgataaaatagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Intra-Species Hit: Count: 0 Inter-species Hit: Count: 1 Min: 1513 Max: 1647 Len: 135 Subject: UniRef90_Q7MXC9 Cluster: Hypothetical protein; n=1; Porphyromonas gingivalis|Rep: Hypothetical protein - Porphyromonas gingivalis (Bacteroides gingivalis) HSP 1 e-value: 6.0E-11 bit: 72.0 Len: 135 Query Start:1513 Query End:1647 Subject Strand: null Subject Start: 41 Subject End: 85 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ F Y R T T K V A K F P H M R K Y F F V Y T E I N L C I Y G N K F S Y I R K F P S L Y T Q R ...................................................... ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ F Y R T K K V A K F P H M R K Y I F V Y T P I N F L I Y G N I F P Y I H K S L S L Y T Q Q ...................................................... ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Predict ORF larger than 30AA ================================================ Protein_Len: 44 Strand: + Start: 93 End: 224 ............................................................................................ M H G D W R I F C L L I H C I I G S Y F V Y L S I K N S I I F L P W H T N P R I P M S M ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 32 Strand: + Start: 231 End: 326 ...................................................................................................................................................................................................................................... M Q T H S F Q S V I A K H K T T S S I R L R G L S I G V R S G R ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 182 End: 544 ..................................................................................................................................................................................... M P P M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V E R L I D W R P I R T L I N K K Y T K R Q N A ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 51 Strand: + Start: 432 End: 584 ............................................................................................................................................................................................................................................................................................................................................................................................................................................... M I V L W R S A S M I Q S P F P D S W G Y G R G I S R P Q H H Q S I S F G T D R V G A H G Q T I G A V ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 605 End: 847 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M T F R S G K G C L S M Q A L W R R R I N P T E A L R L K S Q T T E K T I G A R R K K R Q R R I I K N R L S V S V K G R ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: + Start: 798 End: 902 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M G L Q T K A L S L R I Q K A L S D Q C S R H C S K G D N D C S E P Q ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 59 Strand: + Start: 887 End: 1063 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M Q R T A V T R R S L L R Y C R V Q T Y L K A Q P S W R T K D M L A G K I V P T C K P I T F K T A S C T R H N A T G H .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 927 End: 1208 .............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M A G C K H T S R L S R L G G Q R I C L R G K S F L P A N P S P S R R H H A Q G T T Q Q G I D R G R E A T K Q S N Q S D ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 39 Strand: + Start: 1130 End: 1246 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M A V F A G G F M A D D V D T G D L P R P I L K T F L K A S P L I Y T E P R G ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 481 End: 1269 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M L G A M E E V S P D H S T I S R F R S A L T E L G L M D K L L A Q F N K Q L S R H H I S V R E G V L V D A S L V E T P ................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 57 Strand: + Start: 1286 End: 1456 ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R S S C K Q L L K G G F T T T F T P Y C H P F H S L L F C Q E L L F T P S P Y F S K V S R W Q Y S G G I W R I G ..................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: + Start: 1276 End: 1464 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M T P L E E L V Q A A P Q G G I Y N Y F H S L L P P L S L A P F L P R T P L Y S I S L F F K G L K M A I F G W Y L E N R ............................................................................................................................................................................................................................................. Protein_Len: 34 Strand: + Start: 1546 End: 1647 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M R K F I S V Y T Q I Y F R I Y E K I F P H M R K F R Y L R G A I K ...................................................... Protein_Len: 48 Strand: + Start: 1524 End: 1667 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M G K E I S V Y K K I Y F R I Y T N L F P Y I R K N I S A Y A E I S L P S W C D K I A I K S R Q .................................. Protein_Len: 39 Strand: - Start: 1559 End: 1675 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K R I Y V F K N G Y I R F F I E A Y A S I E S G E H H S L I A I L D L C Y L M .......................... Protein_Len: 60 Strand: - Start: 1405 End: 1653 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Y M P V R D I V F P T Y C R Q T Y L S P F K R I Y S F K N G Y I C L N I E T Y V F F Y K R M H P F K A V K T T R Y F L M ................................................ Protein_Len: 51 Strand: - Start: 1253 End: 1405 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... T R M Q L I L C L G G Q P A R A L L E E L P S K C S S E S R V A V G K V R E K K A L F E E K S W R R M ........................................................................................................................................................................................................................................................................................................ Protein_Len: 38 Strand: - Start: 1026 End: 1139 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. S P M M C L A C R L L A N V S S S F C R F L A I L R I R L V M S R V K P L M .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 958 End: 1227 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. L A V P C Q G L F L L L S V F C D T P Y P A G D F A G K A T N A P P K M A S S T S V P S K G L G M S L V N K F A D G K M .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 683 End: 892 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... D S R P P F L P L P P N D F V P Q G D A Y L S P H L L G N P K C V F A N D S R I C F A N D S W H E L C Q E F P S L S Q M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 35 Strand: - Start: 609 End: 713 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ M E T L S P T S T S A L R T S V G C L G L P L M V I S T A S S L S S M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 60 Strand: - Start: 574 End: 873 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. C V V S F V I P A L L F F L C L L I I L F L N D T L T F P R I F F G T P N V F L L T I V V S V F L M T Q G I N L A N N M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 40 Strand: - Start: 471 End: 590 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R K G I R P A I S S T D G S W L V M L R N R E A S V S N P S M S L S N A C N L M ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 46 Strand: - Start: 379 End: 516 .......................................................................................................................................................................................................................................................................................................................................................................................... S T I R K N L I N S K S V H Y L R L S Q A K S S R M L S E I V K E R N K P S H F L Y R G V M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 43 Strand: - Start: 251 End: 379 .......................................................................................................................................................................................................................................................... L T I A F C L V V E E I L N L P K D I P T R D P R Q D V L F V G L S L I G D A G R S M .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 48 Strand: - Start: 126 End: 269 ............................................................................................................................. N M T Y Y P T I K Y I Q T N F V A Y Y E E W P M G I W S Y R H A H L M Q L R V G K L A N D C L M ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ Protein_Len: 34 Strand: - Start: 3 End: 104 .. D A L K V Y G Q I T L I M Y Y Y S T V S A S N C A K L P S R Q V A M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 52 Strand: - Start: 1 End: 156 Q R R A E R V G T D D S D Y L L I I H R F R L Q L S E I S V K A R R N A Y I K N T L E N Y L L S N N Q M ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ PromScan Matrix: RpoD-17 Strand: + Score: 81 Start: 130 End: 159 .................................................................................................................................ATTGTATAATAGGGAGTTATTTTGTATATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 43 HP_score: -3.4 Tail_Score: -2.60808 Start: 1048 End: 1065 Full_Region: cttctcttcctcggt caatgc cctgtt gcgttg tgccttgtgcatgat .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................caatgccctgttgcgttg............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 100 HP_score: -19.3 Tail_Score: -3.6003 Start: 1279 End: 1321 Full_Region: GTAGGATAAGGCATA ACCCCCCTTGAGGAGCTCGT GCAA GCAGCTCCTCAAGGGGGGA TTTACAACTACTTTC ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCCCTTGAGGAGCTCGTGCAAGCAGCTCCTCAAGGGGGGA............................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 100 HP_score: -22.8 Tail_Score: -2.75536 Start: 1280 End: 1320 Full_Region: TAGGATAAGGCATAA CCCCCCTTGAGGAGCTCGT GCAA GCAGCTCCTCAAGGGGGG ATTTACAACTACTTT ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCTTGAGGAGCTCGTGCAAGCAGCTCCTCAAGGGGGG............................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 100 HP_score: -22.8 Tail_Score: -3.45768 Start: 1280 End: 1320 Full_Region: aaagtagttgtaaat ccccccttgaggagct gcttgcacg agctcctcaagggggg ttatgccttatccta ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ccccccttgaggagctgcttgcacgagctcctcaagggggg............................................................................................................................................................................................................................................................................................................................................................................................. TransTerm Strand: - Conf: 73 HP_score: -4.4 Tail_Score: -4.84311 Start: 1555 End: 1602 Full_Region: ccgcatatgcggaaa tattttttcgtatatacggaaa taaa tttgtgtatatacggaaataaa ttttcttatatacgg ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tattttttcgtatatacggaaataaatttgtgtatatacggaaataaa................................................................................................... TransTerm Strand: + Conf: 83 HP_score: -10.2 Tail_Score: -3.68886 Start: 1581 End: 1620 Full_Region: ATATACACAAATTTA TTTCCGTATATACGAAAA AATA TTTCCGCATATGCGGAAA TTTCGCTACCTTCGT ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGTATATACGAAAAAATATTTCCGCATATGCGGAAA................................................................................. TransTerm Strand: - Conf: 78 HP_score: -12.4 Tail_Score: -2.75389 Start: 1581 End: 1620 Full_Region: acgaaggtagcgaaa tttccgcatatgcggaaa tatt ttttcgtatatacggaaa taaatttgtgtatat ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttccgcatatgcggaaatattttttcgtatatacggaaa................................................................................. TransTerm Strand: - Conf: 87 HP_score: -7.3 Tail_Score: -5.24989 Start: 1601 End: 1622 Full_Region: ccacgaaggtagcga aatttccgc atat gcggaaata ttttttcgtatatac ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aatttccgcatatgcggaaata............................................................................... TransTerm Strand: - Conf: 87 HP_score: -9.9 Tail_Score: -4.24891 Start: 1603 End: 1620 Full_Region: acgaaggtagcgaaa tttccgc atat gcggaaa tattttttcgtatat ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tttccgcatatgcggaaa................................................................................. Find igs database================================================ Query_seq: PG0851:PG0853|PG0851:PG0853:hypothetical protein:DNA-binding protein, histone-like family:<-->:912823..914523 1701 ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Intra-Species Hit: Count: 1 Min: 1 Max: 1701 Len: 1701 Subject: NC_002950_PG0851_PG0853|hypothetical protein:DNA-binding protein, histone-like family|NEGATIVE:POSITIVE|[912823,914523]|1701 HSP 1 e-value: 7.0E-45 bit: 184.0 Len: 93 Query Start:1420 Query End:1512 Subject Strand: POSITIVE Subject Start: 1420 Subject End: 1512 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataaca............................................................................................................................................................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................aagatggcaatattcgggtggtatttggagaatcggataatcggataatcctaaatacataggtaccctatctattacgaaaggagtataaca............................................................................................................................................................................................. HSP 2 e-value: 2.0E-39 bit: 167.0 Len: 84 Query Start:1 Query End:84 Subject Strand: POSITIVE Subject Start: 1 Subject End: 84 ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaat................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ttgtcggcgagcttcacgtacccctgtatcgtcagaatcatataatagtatgatgtgacggaagcggagttgcaggctttcaat................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 3 e-value: 1.0E-21 bit: 107.0 Len: 54 Query Start:1648 Query End:1701 Subject Strand: POSITIVE Subject Start: 1648 Subject End: 1701 ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................tagcaatcaaatcgagacagtaaagtatttaataaccagctaatcaagttcatt Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UUGUCGGCGAGCUUCACGUACCCCUGUAUCGUCAGAAUCAUAUAAUAGUAUGAUGUGACGGAAGCGGAGUUGCAGGCUUUCAAUGGAGACCUUUGCACGGCGAUUGGCGUAUAUUUUGUUUGUUAAUUCAUUGUAUAAUAGGGAGUUAUUUUGUAUAUUUGAGUAUUAAAAACAGCAUAAUAUUCCUCCCAUGGCAUACCAAUCCAAGAAUACCGAUGAGCAUGUAACAUUUGCAGACGCACUCCUUUCAAAGCGUUAUCGCAAAGCACAAAACGACUUCCUCAAUCAGGUUGAGAGGCUUAUCGAUUGGCGUCCGAUCAGGACGCUGAUCAACAAGAAAUACACCAAGCGACAAAAUGCCAUCGGCGCCCCGGCUUAUGACGUGAUUCUCUUAUUCAAGAUGUUGCUUUUGGAGACAUGGUACAACCUCAGUGAUUGUGCUUUGGAGGAGCGCAUCAAUGAUUCAAUCACCUUUUCCCGAUUCUUGGGGCUAUGGAAGAGGUAUCUCCCGACCACAGCACCAUCAGUCGAUUUCGUUCGGCACUGACAGAGUUGGGGCUCAUGGACAAACUAUUGGCGCAGUUUAACAAACAACUUUCCCGCCAUCACAUUUCGGUCAGGGAAGGGGUGCUUGUCGAUGCAAGCCUUGUGGAGACGCCGCAUAAACCCAACGGAAGCAUUACGAUUGAAGUCGCAGACGACAGAGAAGACAAUCGGAGCGAGGAGGAAAAAGAGGCAGAGGAGGAUUAUCAAAAACAGGUUGUCCGUCAGCGUAAAGGGACGGAUGAAGAAGCCCGUUGGGUUUACAAACAAAAGCGUUAUCACUACGGAUACAAAAAGCAUUGUCUGACCAAUGUUCAAGGCAUUGUUCAAAAGGUGAUAACGACUGCAGCGAACCGCAGUGACACGAAGGAGUUUAUUGCGCUAUUGCAGGGUGCAAACAUACCUCAAGGCUCAGCCGUCUUGGCGGACAAAGGAUAUGCUUGCGGGGAAAAUCGUUCCUACCUGCAAACCCAUCACCUUCAAGACGGCAUCAUGCACAAGGCACAACGCAACAGGGCAUUGACCGAGGAAGAGAAGCAACGAAACAAAGCAAUCAGUCGGAUACGGAGCACCAUCGAACGCACCUUUGGCAGUAUUCGCCGGUGGUUUCAUGGCGGACGAUGUCGAUACCGGGGACUUGCCAAGACCCAUACUCAAAACAUUCUUGAAAGCAUCGCCUUUAAUUUAUACAGAACCCCGGGGAUAAUUAUGUCCUCAUUUGUAGGAUAAGGCAUAACCCCCCUUGAGGAGCUCGUGCAAGCAGCUCCUCAAGGGGGGAUUUACAACUACUUUCACUCCUUACUGCCACCCCUUUCACUCGCUCCUUUUUUGCCAAGAACUCCUCUUUACUCCAUCUCCUUAUUUUUCAAAGGUCUCAAGAUGGCAAUAUUCGGGUGGUAUUUGGAGAAUCGGAUAAUCGGAUAAUCCUAAAUACAUAGGUACCCUAUCUAUUACGAAAGGAGUAUAACAACGUUGCGUAUAUAGGGAAGGAAAUUUCCGUAUAUAAGAAAAUUUAUUUCCGUAUAUACACAAAUUUAUUUCCGUAUAUACGAAAAAAUAUUUCCGCAUAUGCGGAAAUUUCGCUACCUUCGUGGUGCGAUAAAAUAGCAAUCAAAUCGAGACAGUAAAGUAUUUAAUAACCAGCUAAUCAAGUUCAUU (((((.....(((((.(((..(((((..((((((..(((((((....))))))).))))))...((((((((((((.((((....))))))..))))....(((.((((...(..(((((((((((...(((((.(((((((((.......(((......((((((((.........))))))))........)))......))).......((.((((((..............((.((.((((((.(((((((..(((((...........((((((........)))))).((((......(((..((((((.....))))))..)))............(((.(((((((..(((.(((.(((......))).))).))).....((((....)))))))))))..((....)).)))....)))).)))))..))))))))))))).)).))...................((((((((((((.(((.(((..(.((.....)))..))).))).)))...(((((......)))))......))))))))))))))))).....))))))..))))))))))))))))..)...)))))))..))))))..)))))...((((((((((....))))))..(((((.....)))))...)))).))))))))....(((((...((((....)))).((((........((((..(((((((......((((((((((((...((((.......(..((((((..(.....).))))))..)....((((((((.(((............((((((((((.((((((..........))))))..((((((.....)))))).......))))))))))..(((.((((..(((((((((.(....).).))))))))...))))...(((((......((....))....((((((((((.((......(((..(.(((((((..............))))))).)..))).)).))))))))))....)))))...))).))).)))).)))).)))).((((..((((..((...........))...((((.(((..(((..(..(((((..((((((.(((((.......))))).)))......)))..)))))..)...)))(((.((.....)).)))................((((((....(((((....((.((((((.....(((((((....))))))).)))))).)).)))))....((((((((((((((((.((....))))))))))))))))))...........)))))).)))..))))......))))..)))).))))))))))))......)))))))..))))....((((........))))))))..(((.((.......((((((((((((((..(((.(.....).)))..))).)))))).....)))))(((((((((((((.(((((............((((((((.(((((.((((((..(((((((.((((.....))))..)))))))..)))))).))))).)))))))).......((((((((....))))))))...))).))))))))))).)))).....)).))).))))).))))).................................. (-544.40) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AAUGAACUUGAUUAGCUGGUUAUUAAAUACUUUACUGUCUCGAUUUGAUUGCUAUUUUAUCGCACCACGAAGGUAGCGAAAUUUCCGCAUAUGCGGAAAUAUUUUUUCGUAUAUACGGAAAUAAAUUUGUGUAUAUACGGAAAUAAAUUUUCUUAUAUACGGAAAUUUCCUUCCCUAUAUACGCAACGUUGUUAUACUCCUUUCGUAAUAGAUAGGGUACCUAUGUAUUUAGGAUUAUCCGAUUAUCCGAUUCUCCAAAUACCACCCGAAUAUUGCCAUCUUGAGACCUUUGAAAAAUAAGGAGAUGGAGUAAAGAGGAGUUCUUGGCAAAAAAGGAGCGAGUGAAAGGGGUGGCAGUAAGGAGUGAAAGUAGUUGUAAAUCCCCCCUUGAGGAGCUGCUUGCACGAGCUCCUCAAGGGGGGUUAUGCCUUAUCCUACAAAUGAGGACAUAAUUAUCCCCGGGGUUCUGUAUAAAUUAAAGGCGAUGCUUUCAAGAAUGUUUUGAGUAUGGGUCUUGGCAAGUCCCCGGUAUCGACAUCGUCCGCCAUGAAACCACCGGCGAAUACUGCCAAAGGUGCGUUCGAUGGUGCUCCGUAUCCGACUGAUUGCUUUGUUUCGUUGCUUCUCUUCCUCGGUCAAUGCCCUGUUGCGUUGUGCCUUGUGCAUGAUGCCGUCUUGAAGGUGAUGGGUUUGCAGGUAGGAACGAUUUUCCCCGCAAGCAUAUCCUUUGUCCGCCAAGACGGCUGAGCCUUGAGGUAUGUUUGCACCCUGCAAUAGCGCAAUAAACUCCUUCGUGUCACUGCGGUUCGCUGCAGUCGUUAUCACCUUUUGAACAAUGCCUUGAACAUUGGUCAGACAAUGCUUUUUGUAUCCGUAGUGAUAACGCUUUUGUUUGUAAACCCAACGGGCUUCUUCAUCCGUCCCUUUACGCUGACGGACAACCUGUUUUUGAUAAUCCUCCUCUGCCUCUUUUUCCUCCUCGCUCCGAUUGUCUUCUCUGUCGUCUGCGACUUCAAUCGUAAUGCUUCCGUUGGGUUUAUGCGGCGUCUCCACAAGGCUUGCAUCGACAAGCACCCCUUCCCUGACCGAAAUGUGAUGGCGGGAAAGUUGUUUGUUAAACUGCGCCAAUAGUUUGUCCAUGAGCCCCAACUCUGUCAGUGCCGAACGAAAUCGACUGAUGGUGCUGUGGUCGGGAGAUACCUCUUCCAUAGCCCCAAGAAUCGGGAAAAGGUGAUUGAAUCAUUGAUGCGCUCCUCCAAAGCACAAUCACUGAGGUUGUACCAUGUCUCCAAAAGCAACAUCUUGAAUAAGAGAAUCACGUCAUAAGCCGGGGCGCCGAUGGCAUUUUGUCGCUUGGUGUAUUUCUUGUUGAUCAGCGUCCUGAUCGGACGCCAAUCGAUAAGCCUCUCAACCUGAUUGAGGAAGUCGUUUUGUGCUUUGCGAUAACGCUUUGAAAGGAGUGCGUCUGCAAAUGUUACAUGCUCAUCGGUAUUCUUGGAUUGGUAUGCCAUGGGAGGAAUAUUAUGCUGUUUUUAAUACUCAAAUAUACAAAAUAACUCCCUAUUAUACAAUGAAUUAACAAACAAAAUAUACGCCAAUCGCCGUGCAAAGGUCUCCAUUGAAAGCCUGCAACUCCGCUUCCGUCACAUCAUACUAUUAUAUGAUUCUGACGAUACAGGGGUACGUGAAGCUCGCCGACAA ...((.(((.((..((.((((.((((...((((((((((((........(((.........)))...(((((((..(((.(((((((.(((((((((((....))))))))))).)))))))....(((((((((((.((((..((((((((........))))))))..)))).)))))))))))..................((((((....((((......((((((.(((..(((.(.....).)))..))))))))).))))...))))))....)))..))))))).........)))))..))))))).((((..(((.(((....((((((((.(((((((((..(((((..(((((.......((((.....((((((((((((((((.(......)))))))))))))))))(((((((((((.......)))))).)))))......((((((...(((........(((((.((((..((((((...)))))))))).).)))).)))...))))))...)))).......(((((..(((((((((((.....))))...)))).)))..)))))))))).......)))).)..)))).))))))))))))).....(((((((.(((..(((((.((...((((((((...((((((((...(((((.(.((.(((((((((..((((.....))))..(((((((((.((((.(..((((.....))).)..)...)))))))))))))..)))))))..)).)).....).))))).....(((((((....)))))))(((((((((..(((((.(((((.......))))).)))))..((((.....)))).....))))))))).........((((((((((((((........((((((..........))))))...........................................((..((((((........((((....))))..))))))....)).))))))))))))))))))))))..))))))))..))..))))).))).........)))))))...(((((((((......(((((((((((......((((.(((....(((((((((((......((((((..(((......)))))))))((.(((((((...((((....)))).))))))).)).......))).....(((((.........(((((((((((.((((((((((((.....))))))....((((....((((((.((...(((....((((..................(((((((((((.....)))).)))))))....(((((((((..((((((.....))))))..)))))))))..))))..(((.....)))...)))...))))))))..))))..))))))..))))))))))).......)))))..)))))).)).))).))))....(((((....(((((...((((.((.(((.(((.......))).))))).)))).)))))...)))))......)))))))))))......)))).)))))..))).)))..)))).)))).)))).)).(((((.....(((((.((((((......))))))..))))).....)))))..)).))).))........ (-551.09) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 1057 110 61 201 152 NC_002950:PG0851|5end_hypothetical_protein_912732..912962_NEGATIVE 1022 330 281 177 128 NC_002950:PG2058|5end_ISPg5,_transposase_Orf1_2156390..2156620_NEGATIVE 934 280 231 224 175 NC_002950:PG1350|5end_ISPg2,_transposase_1430866..1431096_POSITIVE 914 230 181 223 174 NC_002950:PG0459|5end_ISPg5,_transposase_Orf1_501894..502124_NEGATIVE 808 208 161 231 184 NC_002950:PG1447|5end_transcriptional_regulator,_AraC_family_1532211..1532441_NEGATIVE 808 208 161 231 184 NC_002950:PG0826|5end_transcriptional_regulator,_AraC_family_883221..883451_POSITIVE 782 140 91 180 131 NC_002950:PG1198|5end_hypothetical_protein_1276650..1276880_POSITIVE 714 1320 1280 108 68 NC_002950:PG0938|5end_calcium-transporting_ATPase_1000385..1000615_NEGATIVE 648 1318 1280 231 193 NC_002950:PG1176|5end_ABC_transporter,_ATP-binding_protein,_putative_1257644..1257874_NEGATIVE 629 118 72 231 192 NC_002950:PG1625|5end_hypothetical_protein_1707436..1707666_POSITIVE 558 114 75 231 187 NC_002950:PG1032|5end_ISPg3,_transposase_1094333..1094563_POSITIVE 459 1070 1021 162 108 NC_002950:PG0744|5end_RNA_methyltransferase,_TrmH_family_791897..792127_NEGATIVE 448 1149 1102 118 75 NC_002950:PG1388|5end_hypothetical_protein_1470889..1471119_NEGATIVE 430 1179 1137 114 65 NC_002950:PG0450|5end_hypothetical_protein_490812..491042_POSITIVE 426 1160 1114 170 123 NC_002950:PG1495|5end_DNA_topoisomerase_III_1571243..1571473_POSITIVE 421 107 85 95 73 NC_002950:PG1787|5end_hypothetical_protein_1875908..1876138_NEGATIVE 419 570 521 215 152 NC_002950:PG0986|5end_hypothetical_protein_1047426..1047656_POSITIVE 417 569 526 216 161 NC_002950:PG1743|5end_2-dehydro-3-deoxyphosphooctonate_aldolase_1828348..1828578_NEGATIVE 416 509 469 231 198 NC_002950:PG1946|5end_ABC_3_transporter_family_protein_2032133..2032363_POSITIVE 412 558 511 228 165 NC_002950:PG0806|5end_oxidoreductase,_Gfo/Idh/MocA_family_863592..863822_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 917 1380 1331 53 4 NC_002950:PG1196|3end_hypothetical_protein_1275359..1275509_POSITIVE 909 220 171 77 28 NC_002950:PG1350|3end_ISPg2,_transposase_1432076..1432226_POSITIVE 838 1389 1345 45 1 NC_002950:PG1449|3end_hypothetical_protein_1533582..1533732_NEGATIVE 838 1389 1345 45 1 NC_002950:PG0824|3end_hypothetical_protein_881930..882080_POSITIVE 714 1320 1280 83 43 NC_002950:PG1906|3end_ISPg1,_transposase_2006572..2006722_POSITIVE 714 1320 1280 83 43 NC_002950:PG1624|3end_ISPg1,_transposase_1706188..1706338_NEGATIVE 714 1320 1280 83 43 NC_002950:PG1448|3end_ISPg1,_transposase_1533449..1533599_POSITIVE 714 1320 1280 83 43 NC_002950:PG1320|3end_ISPg1,_transposase,_internal_deletion_1399467..1399617_POSITIVE 714 1320 1280 83 43 NC_002950:PG1197|3end_ISPg1,_transposase_1275475..1275625_NEGATIVE 714 1320 1280 83 43 NC_002950:PG1177|3end_ISPg1,_transposase_1257794..1257944_NEGATIVE 714 1320 1280 83 43 NC_002950:PG1031|3end_ISPg1,_transposase_1093081..1093231_NEGATIVE 714 1320 1280 83 43 NC_002950:PG0825|3end_ISPg1,_transposase_882063..882213_NEGATIVE 714 1320 1280 83 43 NC_002950:PG0184|3end_ISPg1,_transposase_217567..217717_POSITIVE 656 1320 1280 83 43 NC_002950:PG1244|3end_ISPg1,_transposase_1320699..1320849_POSITIVE 656 1320 1280 83 43 NC_002950:PG0549|3end_ISPg1,_transposase_605987..606137_NEGATIVE 656 1320 1280 83 43 NC_002950:PG0460|3end_ISPg1,_transposase_503102..503252_POSITIVE 465 678 631 140 69 NC_002950:PG0815|3end_hypothetical_protein_876447..876597_POSITIVE 459 1070 1021 77 23 NC_002950:PG0745|3end_lactoylglutathione_lyase,_putative_791982..792132_NEGATIVE 448 1149 1102 137 94 NC_002950:PG1389|3end_DNA-binding_protein,_histone-like_family_1470870..1471020_NEGATIVE 433 108 61 150 110 NC_002950:PG0656|3end_50S_ribosomal_protein_L34_706945..707095_NEGATIVE