Origin IGS: agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 gaggatactatggtctcacatgagaggatactatggtctcctatgagaggatactatggtctcctatgagaggatactatggtctcctatgagaggatactatggtctcatacgagaggatactatggtctcatatgagaggatactatggtctcgcatgagaggatactatggtctcctatgagaggatact Mask Tandem Repeat Region ================================================ nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn Find is-nt database================================================ Query_seq: PG0493:PG0494|PG0493:PG0494:hypothetical protein:hypothetical protein:<-<-:534991..535183 193 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG0493:PG0494|PG0493:PG0494:hypothetical protein:hypothetical protein:<-<-:534991..535183 193 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG0493:PG0494|PG0493:PG0494:hypothetical protein:hypothetical protein:<-<-:534991..535183 193 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Predict ORF larger than 30AA ================================================ Protein_Len: 42 Strand: - Start: 13 End: 138 ............ L L G Y Y G R M R S W L I R E Y S V M T D E R I L G Y Y G R M P S W L I R E Y S V M ....................................................... agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 53 HP_score: -6.1 Tail_Score: -2.6891 Start: 97 End: 155 Full_Region: gaggatactatggtc tcctatgagaggatactatggtctcct atgag aggatactatggtctcctatgagagga tactatggtctcata ................................................................................................tcctatgagaggatactatggtctcctatgagaggatactatggtctcctatgagagga...................................... TransTerm Strand: - Conf: 39 HP_score: -2.0 Tail_Score: -2.62396 Start: 133 End: 165 Full_Region: tctcacatgagagga tactatggtctcct atgag aggatactatggtc tcctatgagaggata ....................................................................................................................................tactatggtctcctatgagaggatactatggtc............................ Find igs database================================================ Query_seq: PG0493:PG0494|PG0493:PG0494:hypothetical protein:hypothetical protein:<-<-:534991..535183 193 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Intra-Species Hit: Count: 13 Min: 1 Max: 193 Len: 193 Subject: NC_002950_PG0493_PG0494|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[534991,535183]|193 HSP 1 e-value: 1.0E-105 bit: 383.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 1 Subject End: 193 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc Subject: NC_002950_PG1389_PG1391|DNA-binding protein, histone-like family:hypothetical protein|NEGATIVE:POSITIVE|[1471419,1471809]|391 HSP 1 e-value: 5.0E-84 bit: 311.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 101 Subject End: 293 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctctcgtgtgagaccatagtatcctc HSP 2 e-value: 7.0E-77 bit: 287.0 Len: 189 Query Start:1 Query End:189 Subject Strand: POSITIVE Subject Start: 147 Subject End: 335 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtat.... agtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctctcgtgtgagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtat.... HSP 3 e-value: 6.0E-74 bit: 278.0 Len: 172 Query Start:22 Query End:193 Subject Strand: POSITIVE Subject Start: 99 Subject End: 270 .....................atagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc .....................atagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctc HSP 4 e-value: 4.0E-72 bit: 272.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 124 Subject End: 316 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctctcgtgtgagaccatagtatcctctcataggagaccatagtatcctc Subject: NC_002950_PG0265_PG0267|hypothetical protein:arginyl-tRNA synthetase|NEGATIVE:POSITIVE|[298642,299239]|598 HSP 1 e-value: 5.0E-84 bit: 311.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 24 Subject End: 216 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctc HSP 2 e-value: 7.0E-77 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 1 Subject End: 193 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctc HSP 3 e-value: 1.0E-59 bit: 230.0 Len: 172 Query Start:1 Query End:172 Subject Strand: POSITIVE Subject Start: 47 Subject End: 218 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctc..................... agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc..................... HSP 4 e-value: 6.0E-25 bit: 115.0 Len: 82 Query Start:1 Query End:82 Subject Strand: POSITIVE Subject Start: 139 Subject End: 220 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgt............................................................................................................... agtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt............................................................................................................... Subject: NC_002950_PG1117_PG1118|MATE efflux family protein:clpB protein|POSITIVE:NEGATIVE|[1191602,1192172]|571 HSP 1 e-value: 1.0E-81 bit: 303.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 219 Subject End: 411 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctc HSP 2 e-value: 7.0E-77 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 242 Subject End: 434 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctc HSP 3 e-value: 2.0E-71 bit: 270.0 Len: 172 Query Start:22 Query End:193 Subject Strand: NEGATIVE Subject Start: 265 Subject End: 436 .....................atagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc .....................atagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtatgagaccatagtatcctc HSP 4 e-value: 4.0E-66 bit: 252.0 Len: 171 Query Start:1 Query End:171 Subject Strand: NEGATIVE Subject Start: 218 Subject End: 388 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctct...................... agtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctct...................... HSP 5 e-value: 5.0E-19 bit: 95.6 Len: 80 Query Start:1 Query End:80 Subject Strand: NEGATIVE Subject Start: 194 Subject End: 273 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctc................................................................................................................. agtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctcttatataagactatactattctctc................................................................................................................. Subject: NC_002950_PG0626_PG0627|hypothetical protein:RNA-binding protein|POSITIVE:NEGATIVE|[680407,681231]|825 HSP 1 e-value: 1.0E-81 bit: 303.0 Len: 189 Query Start:1 Query End:189 Subject Strand: NEGATIVE Subject Start: 314 Subject End: 502 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtat.... agtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtat.... HSP 2 e-value: 3.0E-79 bit: 295.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 241 Subject End: 433 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctc HSP 3 e-value: 7.0E-77 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 356 Subject End: 548 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctc HSP 4 e-value: 2.0E-74 bit: 280.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 287 Subject End: 479 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctcataggagaccatagtatcctc HSP 5 e-value: 2.0E-74 bit: 280.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 333 Subject End: 525 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctc HSP 6 e-value: 4.0E-72 bit: 272.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 264 Subject End: 456 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctcataggagaccatagtatcctctcgtatgagaccatagtatcctc HSP 7 e-value: 4.0E-72 bit: 272.0 Len: 177 Query Start:17 Query End:193 Subject Strand: NEGATIVE Subject Start: 379 Subject End: 555 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ................agaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctc HSP 8 e-value: 2.0E-64 bit: 246.0 Len: 172 Query Start:1 Query End:172 Subject Strand: NEGATIVE Subject Start: 239 Subject End: 410 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctc..................... agtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctc..................... HSP 9 e-value: 1.0E-28 bit: 127.0 Len: 84 Query Start:1 Query End:84 Subject Strand: NEGATIVE Subject Start: 235 Subject End: 318 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtat............................................................................................................. agtattctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtat............................................................................................................. Subject: NC_002950_PG1426_PG1427|hypothetical protein:thiol protease/hemagglutinin PrtT precursor, putative|NEGATIVE:NEGATIVE|[1511401,1511954]|554 HSP 1 e-value: 2.0E-80 bit: 299.0 Len: 191 Query Start:3 Query End:193 Subject Strand: POSITIVE Subject Start: 3 Subject End: 193 ..tatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ..tatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctc HSP 2 e-value: 3.0E-79 bit: 295.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 24 Subject End: 216 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctc HSP 3 e-value: 4.0E-75 bit: 281.0 Len: 174 Query Start:1 Query End:174 Subject Strand: POSITIVE Subject Start: 47 Subject End: 220 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcat................... agtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcat................... HSP 4 e-value: 9.0E-67 bit: 254.0 Len: 156 Query Start:1 Query End:156 Subject Strand: POSITIVE Subject Start: 70 Subject End: 225 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggag..................................... agtatcctctcatacgagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcataggag..................................... Subject: NC_002950_PG1714_PG1715|pyridoxamine-phosphate oxidase:hypothetical protein|NEGATIVE:NEGATIVE|[1802583,1803482]|900 HSP 1 e-value: 7.0E-77 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 300 Subject End: 492 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctc HSP 2 e-value: 7.0E-77 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 323 Subject End: 515 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatacgagaccatagtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctc HSP 3 e-value: 7.0E-77 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 346 Subject End: 538 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctc HSP 4 e-value: 1.0E-72 bit: 274.0 Len: 174 Query Start:1 Query End:174 Subject Strand: NEGATIVE Subject Start: 296 Subject End: 469 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcat................... agtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcat................... HSP 5 e-value: 2.0E-67 bit: 256.0 Len: 177 Query Start:17 Query End:193 Subject Strand: NEGATIVE Subject Start: 369 Subject End: 545 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ................agaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctc HSP 6 e-value: 6.0E-62 bit: 238.0 Len: 152 Query Start:1 Query End:152 Subject Strand: NEGATIVE Subject Start: 295 Subject End: 446 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcata......................................... agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcata......................................... HSP 7 e-value: 1.0E-19 bit: 97.6 Len: 61 Query Start:1 Query End:61 Subject Strand: NEGATIVE Subject Start: 294 Subject End: 354 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatat.................................................................................................................................... agtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatat.................................................................................................................................... Subject: NC_002950_PG1556_PG1559|hypothetical protein:aminomethyltransferase|POSITIVE:NEGATIVE|[163706 2,1637993]|932 HSP 1 e-value: 7.0E-77 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 380 Subject End: 572 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcgtatgagaccataatatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctc HSP 2 e-value: 6.0E-74 bit: 278.0 Len: 188 Query Start:3 Query End:190 Subject Strand: NEGATIVE Subject Start: 360 Subject End: 547 ..tatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatc... ..tatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatc... HSP 3 e-value: 4.0E-72 bit: 272.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 311 Subject End: 503 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctcatgcgagaccatagtatcctctcatatgagaccatagtatcctc HSP 4 e-value: 4.0E-72 bit: 272.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 334 Subject End: 526 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctcatgcgagaccatagtatcctc HSP 5 e-value: 6.0E-65 bit: 248.0 Len: 193 Query Start:1 Query End:193 Subject Strand: NEGATIVE Subject Start: 288 Subject End: 480 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcatgagagaccataatatcctc HSP 6 e-value: 6.0E-65 bit: 248.0 Len: 177 Query Start:17 Query End:193 Subject Strand: NEGATIVE Subject Start: 403 Subject End: 579 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ................agaccatagtatcctctcgtatgagaccataatatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctc HSP 7 e-value: 2.0E-52 bit: 206.0 Len: 172 Query Start:1 Query End:172 Subject Strand: NEGATIVE Subject Start: 286 Subject End: 457 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctc..................... agtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcatgagagaccataatatcctctc..................... HSP 8 e-value: 8.0E-21 bit: 101.0 Len: 83 Query Start:3 Query End:85 Subject Strand: NEGATIVE Subject Start: 281 Subject End: 363 ..tatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatg............................................................................................................ ..tatcttctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcatgagagaccataatatcctctcgtatg............................................................................................................ HSP 9 e-value: 8.0E-18 bit: 91.7 Len: 62 Query Start:1 Query End:62 Subject Strand: NEGATIVE Subject Start: 281 Subject End: 342 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatg................................................................................................................................... agtatcctctcatatgagaccatagtatcctctcatgagagaccataatatcctctcgtatg................................................................................................................................... Subject: NC_002950_PG0088_PG0090|peptidase, M16 family:Dps family protein|POSITIVE:POSITIVE|[104633,105663]|1031 HSP 1 e-value: 7.0E-77 bit: 287.0 Len: 177 Query Start:17 Query End:193 Subject Strand: POSITIVE Subject Start: 428 Subject End: 604 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ................agaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgcgagaccatagtatcctctcatgcgagaccatagtatcctc HSP 2 e-value: 4.0E-72 bit: 272.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 435 Subject End: 627 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgcgagaccatagtatcctctcatgcgagaccatagtatcctctcgtataagaccatagtatcctc HSP 3 e-value: 4.0E-69 bit: 262.0 Len: 172 Query Start:1 Query End:172 Subject Strand: POSITIVE Subject Start: 458 Subject End: 629 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctc..................... agtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgcgagaccatagtatcctctcatgcgagaccatagtatcctctcgtataagaccatagtatcctctc..................... HSP 4 e-value: 9.0E-30 bit: 131.0 Len: 82 Query Start:1 Query End:82 Subject Strand: POSITIVE Subject Start: 550 Subject End: 631 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgt............................................................................................................... agtatcctctcatgcgagaccatagtatcctctcatgcgagaccatagtatcctctcgtataagaccatagtatcctctcgt............................................................................................................... Subject: NC_002950_PG0585_PG0587|YqeY family protein:yadS protein|POSITIVE:NEGATIVE|[643862,644701]|840 HSP 1 e-value: 2.0E-74 bit: 280.0 Len: 161 Query Start:1 Query End:161 Subject Strand: NEGATIVE Subject Start: 297 Subject End: 457 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccat................................ agtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcataggagaccat................................ HSP 2 e-value: 6.0E-74 bit: 278.0 Len: 184 Query Start:1 Query End:184 Subject Strand: NEGATIVE Subject Start: 297 Subject End: 480 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccat......... agtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcataggagaccat......... HSP 3 e-value: 2.0E-67 bit: 256.0 Len: 177 Query Start:17 Query End:193 Subject Strand: NEGATIVE Subject Start: 311 Subject End: 487 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ................agaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctc Subject: NC_002950_PG2159_PG2161|protoporphyrinogen oxidase:transcriptional regulator, AraC family|POSITIVE:NEGATIVE|[2265935,2266806]|872 HSP 1 e-value: 2.0E-67 bit: 256.0 Len: 177 Query Start:17 Query End:193 Subject Strand: POSITIVE Subject Start: 360 Subject End: 536 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ................agaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctc HSP 2 e-value: 6.0E-65 bit: 248.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 298 Subject End: 490 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagaccataatatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctc HSP 3 e-value: 3.0E-60 bit: 232.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 390 Subject End: 582 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtatcctc HSP 4 e-value: 8.0E-58 bit: 224.0 Len: 169 Query Start:21 Query End:189 Subject Strand: POSITIVE Subject Start: 295 Subject End: 463 ....................catagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtat.... ....................catagtatcctctcatgtgagaccataatatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtat.... HSP 5 e-value: 8.0E-58 bit: 224.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 367 Subject End: 559 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc agtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtgtaagaccatagtatcctc HSP 6 e-value: 8.0E-55 bit: 214.0 Len: 160 Query Start:17 Query End:176 Subject Strand: POSITIVE Subject Start: 429 Subject End: 588 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgt................. ................agaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtatcctctcatgt................. HSP 7 e-value: 1.0E-47 bit: 190.0 Len: 128 Query Start:1 Query End:128 Subject Strand: POSITIVE Subject Start: 459 Subject End: 586 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcat................................................................. agtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtatcctctcat................................................................. HSP 8 e-value: 2.0E-24 bit: 113.0 Len: 81 Query Start:113 Query End:193 Subject Strand: POSITIVE Subject Start: 295 Subject End: 375 ................................................................................................................catagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc ................................................................................................................catagtatcctctcatgtgagaccataatatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctc HSP 9 e-value: 2.0E-12 bit: 73.8 Len: 37 Query Start:1 Query End:37 Subject Strand: POSITIVE Subject Start: 551 Subject End: 587 agtatcctctcataggagaccatagtatcctctcatg............................................................................................................................................................ agtatcctctcataggagaccatagtatcctctcatg............................................................................................................................................................ Subject: NC_002950_PG0197_PG0198|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[236295,237021]|727 HSP 1 e-value: 4.0E-63 bit: 242.0 Len: 154 Query Start:17 Query End:170 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 154 ................agaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctc....................... ................agaccatagtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggggaccatagtatcctc....................... HSP 2 e-value: 5.0E-56 bit: 218.0 Len: 154 Query Start:40 Query End:193 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 154 .......................................agaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc .......................................agaccatagtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggggaccatagtatcctc HSP 3 e-value: 3.0E-54 bit: 212.0 Len: 147 Query Start:1 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 147 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctc.............................................. agtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggggaccatagtatcctc.............................................. Subject: NC_002950_PG0807_PG0809|NusB family protein:hypothetical protein|NEGATIVE:NEGATIVE|[864815,865153]|339 HSP 1 e-value: 1.0E-22 bit: 107.0 Len: 62 Query Start:16 Query End:77 Subject Strand: POSITIVE Subject Start: 142 Subject End: 203 ...............gagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcct.................................................................................................................... ...............gagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct.................................................................................................................... HSP 2 e-value: 3.0E-20 bit: 99.6 Len: 62 Query Start:39 Query End:100 Subject Strand: POSITIVE Subject Start: 142 Subject End: 203 ......................................gagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcct............................................................................................. ......................................gagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct............................................................................................. HSP 3 e-value: 1.0E-19 bit: 97.6 Len: 65 Query Start:59 Query End:123 Subject Strand: POSITIVE Subject Start: 139 Subject End: 203 ..........................................................tatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcct...................................................................... ..........................................................tatgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct...................................................................... HSP 4 e-value: 1.0E-19 bit: 97.6 Len: 65 Query Start:82 Query End:146 Subject Strand: POSITIVE Subject Start: 139 Subject End: 203 .................................................................................tatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcct............................................... .................................................................................tatgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct............................................... HSP 5 e-value: 8.0E-18 bit: 91.7 Len: 62 Query Start:108 Query End:169 Subject Strand: POSITIVE Subject Start: 142 Subject End: 203 ...........................................................................................................gagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcct........................ ...........................................................................................................gagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct........................ HSP 6 e-value: 8.0E-18 bit: 91.7 Len: 62 Query Start:131 Query End:192 Subject Strand: POSITIVE Subject Start: 142 Subject End: 203 ..................................................................................................................................gagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcct. ..................................................................................................................................gagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct. HSP 7 e-value: 7.0E-12 bit: 71.9 Len: 40 Query Start:154 Query End:193 Subject Strand: POSITIVE Subject Start: 142 Subject End: 181 .........................................................................................................................................................gagaccatagtatcctctcatgtgagaccatagtatcctc .........................................................................................................................................................gagaccatagtatcctctcatgttagaccatagtatcctc HSP 8 e-value: 1.0E-10 bit: 67.9 Len: 54 Query Start:1 Query End:54 Subject Strand: POSITIVE Subject Start: 150 Subject End: 203 agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcct........................................................................................................................................... agtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct........................................................................................................................................... Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AGUAUCCUCUCAUAGGAGACCAUAGUAUCCUCUCAUGCGAGACCAUAGUAUCCUCUCAUAUGAGACCAUAGUAUCCUCUCGUAUGAGACCAUAGUAUCCUCUCAUAGGAGACCAUAGUAUCCUCUCAUAGGAGACCAUAGUAUCCUCUCAUAGGAGACCAUAGUAUCCUCUCAUGUGAGACCAUAGUAUCCUC .......((((....((((..(((.(((..((((((((((((..(((.(((..((((....))))..))).)))..))))))))))))..))).)))..))))....))))..(((.(((..(((((((.((((..(((.(((..((((....))))..))).)))..)))).)))))))..))).))).... (-62.90) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GAGGAUACUAUGGUCUCACAUGAGAGGAUACUAUGGUCUCCUAUGAGAGGAUACUAUGGUCUCCUAUGAGAGGAUACUAUGGUCUCCUAUGAGAGGAUACUAUGGUCUCAUACGAGAGGAUACUAUGGUCUCAUAUGAGAGGAUACUAUGGUCUCGCAUGAGAGGAUACUAUGGUCUCCUAUGAGAGGAUACU .((((.(((((((((((.((((.(((...((((((((.((((.......((.((((((((.((((.......((.((((((((.((((.....)))).)))))))).)).......)))).)))))))).)).......)))).))))))))))).)))).)))...)))))))).))))............. (-72.08) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 950 50 1 141 92 NC_002950:PG0493|5end_hypothetical_protein_534900..535130_NEGATIVE 938 170 121 123 74 NC_002950:PG1426|5end_hypothetical_protein_1511310..1511540_NEGATIVE 862 80 31 148 99 NC_002950:PG0265|5end_hypothetical_protein_298551..298781_NEGATIVE 690 150 101 226 179 NC_002950:PG1389|5end_DNA-binding_protein,_histone-like_family_1471328..1471558_NEGATIVE 341 149 101 117 68 NC_002950:PG1831|5end_ATP-dependent_DNA_helicase_RecQ_1925422..1925652_NEGATIVE 339 64 30 40 8 NC_002950:PG1359|5end_hypothetical_protein_1438615..1438845_NEGATIVE 331 100 54 179 128 NC_002950:PG0197|5end_hypothetical_protein_236204..236434_NEGATIVE 302 99 51 56 6 NC_002950:PG0882|5end_hypothetical_protein_944195..944425_POSITIVE 297 50 6 65 22 NC_002950:PG1313|5end_dipeptidase-related_protein_1392282..1392512_POSITIVE 296 57 11 223 172 NC_002950:PG1522|5end_mandelate_racemase/muconate_lactonizing_enzyme_family_protein_1600170..1600400_NEGATIVE 281 68 25 46 4 NC_002950:PG0583|5end_cell_division_protein_FtsA_640425..640655_POSITIVE 281 109 69 55 5 NC_002950:PG0245|5end_universal_stress_protein_family_280885..281115_NEGATIVE 280 190 141 197 150 NC_002950:PG0618|5end_alkyl_hydroperoxide_reductase,_C_subunit_670372..670602_POSITIVE 278 80 31 162 112 NC_002950:PG0986|5end_hypothetical_protein_1047426..1047656_POSITIVE 275 43 5 50 5 NC_002950:PG1919|5end_ribosomal_protein_L15_2016281..2016511_NEGATIVE 274 100 51 62 18 NC_002950:PG0400|5end_hypothetical_protein_437528..437758_NEGATIVE 272 44 1 46 7 NC_002950:PG2069|5end_oxidoreductase,_short_chain_dehydrogenase/reductase_family_2164798..2165028_POSITIVE 272 68 25 130 85 NC_002950:PG2027|5end_hypothetical_protein_2125494..2125724_POSITIVE 272 56 15 193 158 NC_002950:PG0171|5end_5'-nucleotidase_family_protein_191724..191954_POSITIVE 270 67 21 211 167 NC_002950:PG1846|5end_hypothetical_protein_1946037..1946267_POSITIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 339 64 30 37 5 NC_002950:PG1360|3end_phosphoribosylamine--glycine_ligase_1438618..1438768_NEGATIVE 314 69 21 54 7 NC_002950:PG0068|3end_hypothetical_protein_82079..82229_POSITIVE 272 44 1 40 1 NC_002950:PG2068|3end_glycerol-3-phosphate_cytidylyltransferase_2164872..2165022_POSITIVE 272 68 25 101 56 NC_002950:PG2026|3end_phosphoglycerate_mutase_family_protein_2125545..2125695_POSITIVE 269 180 132 146 93 NC_002950:PG1996|3end_deoxyribose-phosphate_aldolase_2086870..2087020_POSITIVE 263 134 107 81 55 NC_002950:PG1508|3end_hypothetical_protein_1586688..1586838_POSITIVE 260 41 1 68 33 NC_002950:PG0678|3end_pyrazinamidase/nicotinamidase,_putative_729471..729621_POSITIVE 259 182 143 59 18 NC_002950:PG0054|3end_single-stranded-DNA-specific_exonuclease_RecJ_66899..67049_POSITIVE 258 150 104 93 47 NC_002950:PG1851|3end_phosphopantothenoylcysteine_decarboxylase/phosphopantothenate--cysteine_ligase_1949954..1950104_NEGATIVE 257 147 103 147 106 NC_002950:PG0216|3end_hypothetical_protein_252536..252686_POSITIVE 257 117 77 131 96 NC_002950:PG0202|3end_uroporphyrinogen-III_synthase_HemD,_putative_238767..238917_NEGATIVE 256 137 95 68 20 NC_002950:PG0656|3end_50S_ribosomal_protein_L34_706945..707095_NEGATIVE 252 111 79 45 14 NC_002950:PG1760|3end_ABC_transporter,_ATP-binding_protein_1847216..1847366_POSITIVE 252 99 53 139 88 NC_002950:PG0807|3end_NusB_family_protein_863630..863780_NEGATIVE 249 57 11 110 55 NC_002950:PG0337|3end_hypothetical_protein_371377..371527_NEGATIVE 247 137 92 131 92 NC_002950:PG1408|3end_heavy_metal_efflux_pump,_CzcD_family_1492906..1493056_POSITIVE 246 98 53 43 1 NC_002950:PG1535|3end_transcriptional_regulator,_putative_1614150..1614300_NEGATIVE 244 56 12 48 1 NC_002950:PG1633|3end_galactokinase_1714619..1714769_POSITIVE 244 180 133 56 7 NC_002950:PG0173|3end_transcriptional_regulator,_putative_194388..194538_NEGATIVE 243 169 121 134 87 NC_002950:PG2095|3end_lipoprotein,_putative_2198290..2198440_NEGATIVE