Origin IGS:
ggactacagaaaagtcgcaccgtctcgtctgtcgggtttggattcgttcaccattttacggaccaaaactcactcatttctcgcccctgtttttctaaaaaatggaaccaaaactttttcgttccggcgcgagaattttttgtttgccgcgccaaaaacaaaaaatttacgcgccacgttttttggagtagcaaacgggaaaattttcgtgtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9
cggagtgaaaaaggagccgccccgaagcggacgactatttggaacaaaggtaacattttcaaagtaacattttctctgtctgccgacacatttttcagaaccgaggcaggcgtgaccgctgtcacccgaaagtcttcttaaaaagcaagggatgtaaacctataacggactttggagtaaaacactgtaattgtaatcacgaacttaacctctccgagtgtcaattcttctcagtacacgccacacgaaaattttcccgtttgctactccaaaaaacgtggcgcgtaaattttttgtttttggcgcggcaaacaaaaaattctcgcgccggaacgaaaaagttttggttccattttttagaaaaacaggggcgagaaatgagtgagttttggtccgtaaaatggtgaacgaatccaaacccgacagacgagacggtgcgacttttctgtagtcc

Mask Tandem Repeat Region ================================================
ggactacagaaaagtcgcaccgtctcgtctgtcgggtttggattcgttcaccattttacggaccaaaactcactcatttctcgcccctgtttttctaaaaaatggaaccaaaactttttcgttccggcgcgagaattttttgtttgccgcgccaaaaacaaaaaatttacgcgccacgttttttggagtagcaaacgggaaaattttcgtgtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagannnnnnnnnnnnnnnnnnnnnnnnnnnnnnttccaaatagtcgtccgcttcggggcggctcctttttcactccg

Find is-nt database================================================
Query_seq: PG0470:PG0471|PG0470:PG0471:hypothetical protein:hypothetical protein:<-->:511974..512427 454
ggactacagaaaagtcgcaccgtctcgtctgtcgggtttggattcgttcaccattttacggaccaaaactcactcatttctcgcccctgtttttctaaaaaatggaaccaaaactttttcgttccggcgcgagaattttttgtttgccgcgccaaaaacaaaaaatttacgcgccacgttttttggagtagcaaacgggaaaattttcgtgtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find is-aa database================================================
Query_seq: PG0470:PG0471|PG0470:PG0471:hypothetical protein:hypothetical protein:<-->:511974..512427 454
ggactacagaaaagtcgcaccgtctcgtctgtcgggtttggattcgttcaccattttacggaccaaaactcactcatttctcgcccctgtttttctaaaaaatggaaccaaaactttttcgttccggcgcgagaattttttgtttgccgcgccaaaaacaaaaaatttacgcgccacgttttttggagtagcaaacgggaaaattttcgtgtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
Intra-Species Hit: Count: 0
Inter-species Hit: Count: 0

Find nr database================================================
Query_seq: PG0470:PG0471|PG0470:PG0471:hypothetical protein:hypothetical protein:<-->:511974..512427 454
ggactacagaaaagtcgcaccgtctcgtctgtcgggtttggattcgttcaccattttacggaccaaaactcactcatttctcgcccctgtttttctaaaaaatggaaccaaaactttttcgttccggcgcgagaattttttgtttgccgcgccaaaaacaaaaaatttacgcgccacgttttttggagtagcaaacgggaaaattttcgtgtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
Intra-Species Hit: Count: 0

Inter-species Hit: Count: 2	Min: 40	Max: 210	Len: 171
Subject: UniRef90_Q7MUH1 Cluster: Hypothetical protein; n=1; Porphyromonas gingivalis|Rep: Hypothetical protein - Porphyromonas gingivalis (Bacteroides gingivalis)
HSP  1	e-value: 2.0E-8	bit: 60.5	Len: 171	Query Start:40	Query End:210	Subject Strand: null	Subject Start: 11	Subject End: 67
....................................... T  K  I  F  P  F  A  T  P  K  N  V  A  R  K  F  F  V  F  G  A  A  N  K  K  F  S  R  R  N  E  K  V  L  V  P  F  F  R  K  T  G  A  R  N  E  *  V  L  V  R  K  M  V  N  E  S ....................................................................................................................................................................................................................................................
....................................... S  K  I  F  P  F  A  T  P  Q  N  A  V  R  K  L  F  Y  F  G  V  G  S  K  K  F  S  R  H  N  E  K  I  L  A  P  L  F  Q  G  I  R  A  T  I  G  A  F  P  V  R  V  F  L  N  S  S ....................................................................................................................................................................................................................................................

Subject: UniRef90_Q7MU89 Cluster: Hypothetical protein; n=1; Porphyromonas gingivalis|Rep: Hypothetical protein - Porphyromonas gingivalis (Bacteroides gingivalis)
HSP  1	e-value: 7.0E-8	bit: 58.5	Len: 156	Query Start:49	Query End:204	Subject Strand: null	Subject Start: 10	Subject End: 61
................................................ H  H  F  T  D  Q  N  S  L  I  S  R  P  C  F  S  K  K  W  N  Q  N  F  F  V  P  A  R  E  F  F  V  C  R  A  K  N  K  K  F  T  R  H  V  F  W  S  S  K  R  E  N ..........................................................................................................................................................................................................................................................
................................................ H  G  N  T  N  Q  K  S  S  D  C  G  S  C  F  L  K  K  W  R  E  I  F  F  V  L  A  C  K  F  F  N  C  R  A  K  T  K  K  F  S  R  H  V  F  V  G  N  K  C  E  N ..........................................................................................................................................................................................................................................................


ggactacagaaaagtcgcaccgtctcgtctgtcgggtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
Predict ORF larger than 30AA ================================================
Protein_Len: 52	Strand: +	Start: 76	End: 231
........................................................................... M  S  R  P  C  F  S  K  K  W  N  Q  N  F  F  V  P  A  R  E  F  F  V  C  R  A  K  N  K  K  F  T  R  H  V  F  W  S  S  K  R  E  N  F  R  V  A  C  T  E  K  N ...............................................................................................................................................................................................................................
Protein_Len: 60	Strand: +	Start: 29	End: 247
............................ M  S  G  L  D  S  F  T  I  L  R  T  K  T  H  S  F  L  A  P  V  F  L  K  N  G  T  K  T  F  S  F  R  R  E  N  F  L  F  A  A  P  K  T  K  N  L  R  A  T  F  F  G  V  A  N  G  K  I  F ...............................................................................................................................................................................................................
Protein_Len: 41	Strand: +	Start: 330	End: 452
......................................................................................................................................................................................................................................................................................................................................... M  T  A  V  T  P  A  S  V  L  K  N  V  S  A  D  R  E  N  V  T  L  K  M  L  P  L  F  Q  I  V  V  R  F  G  A  A  P  F  S  L ..
Protein_Len: 51	Strand: +	Start: 302	End: 454
............................................................................................................................................................................................................................................................................................................. M  P  C  F  L  R  R  L  S  G  D  S  G  H  A  C  L  G  S  E  K  C  V  G  R  Q  R  K  C  Y  F  E  N  V  T  F  V  P  N  S  R  P  L  R  G  G  S  F  F  T  P 
Protein_Len: 34	Strand: -	Start: 317	End: 418
............................................................................................................................................................................................................................................................................................................................ S  S  K  R  T  V  A  T  V  G  A  E  T  R  F  F  T  D  A  S  L  S  F  T  V  K  F  I  N  G  K  N  W  M ....................................
Protein_Len: 32	Strand: -	Start: 170	End: 265
......................................................................................................................................................................... A  G  R  K  K  S  Y  C  V  P  F  N  E  H  P  T  Y  Q  S  S  N  V  S  P  S  T  L  N  T  I  V  M .............................................................................................................................................................................................
Protein_Len: 55	Strand: -	Start: 73	End: 237
........................................................................ E  N  R  A  G  T  K  R  F  F  P  V  L  V  K  E  N  R  R  S  F  K  K  N  A  A  G  F  V  F  F  K  R  A  V  N  K  P  T  A  F  P  F  I  K  T  H  R  T  S  L  L  I  S  M .........................................................................................................................................................................................................................
Protein_Len: 60	Strand: -	Start: 51	End: 386
.................................................. R  T  A  H  V  S  F  F  Q  C  E  S  L  N  L  E  H  N  C  N  C  H  K  V  G  F  D  T  I  P  K  C  G  K  S  K  L  F  V  K  P  H  C  R  D  R  R  G  R  N  Q  F  I  H  R  C  V  S  F  M ....................................................................

ggactacagaaaagtcgcaccgtctcgtctgtcgggtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
Predict Promoter with matrix: RpoD-15 score > 80================================================

Predict Promoter with matrix: RpoD-16 score > 80================================================

Predict Promoter with matrix: RpoD-17 score > 80================================================

Predict Promoter with matrix: RpoD-18 score > 80================================================

Predict Promoter with matrix: RpoD-19 score > 80================================================

Predict Promoter with matrix: RpoN score > 80================================================

ggactacagaaaagtcgcaccgtctcgtctgtcgggtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
Predict TransTerm conf > 70================================================
TransTerm Strand: -	Conf: 47	HP_score: -2.1	Tail_Score: -3.52177	Start: 108	End: 127	Full_Region: caaaaaattctcgcg ccggaac gaaaaa gttttgg ttccattttttagaa
...........................................................................................................ccggaacgaaaaagttttgg.......................................................................................................................................................................................................................................................................................................................................
TransTerm Strand: -	Conf: 46	HP_score: -3.5	Tail_Score: -3.27278	Start: 115	End: 165	Full_Region: aacgtggcgcgtaaa ttttttgtttttggcgcggcaa acaaaaaa ttctcgcgccggaacgaaaaa gttttggttccattt
..................................................................................................................ttttttgtttttggcgcggcaaacaaaaaattctcgcgccggaacgaaaaa.................................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 62	HP_score: -6.2	Tail_Score: -3.62746	Start: 124	End: 177	Full_Region: CAAAACTTTTTCGTT CCGGCGCGAGAATTTTTTGTTT GCCGCGCCAA AAACAAAAAATTTACGCGCCAC GTTTTTTGGAGTAGC
...........................................................................................................................CCGGCGCGAGAATTTTTTGTTTGCCGCGCCAAAAACAAAAAATTTACGCGCCAC.....................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 83	HP_score: -6.0	Tail_Score: -5.0538	Start: 124	End: 178	Full_Region: CAAAACTTTTTCGTT CCGGCGCGAGAATTTTTTGTTT GCCGCGCCAA AAACAAAAAATTTACGCGCCACG TTTTTTGGAGTAGCA
...........................................................................................................................CCGGCGCGAGAATTTTTTGTTTGCCGCGCCAAAAACAAAAAATTTACGCGCCACG....................................................................................................................................................................................................................................................................................
TransTerm Strand: +	Conf: 69	HP_score: -9.7	Tail_Score: -2.77166	Start: 125	End: 176	Full_Region: AAAACTTTTTCGTTC CGGCGCGAGAATTTTTTGTTT GCCGCGCCAA AAACAAAAAATTTACGCGCCA CGTTTTTTGGAGTAG
............................................................................................................................CGGCGCGAGAATTTTTTGTTTGCCGCGCCAAAAACAAAAAATTTACGCGCCA......................................................................................................................................................................................................................................................................................

Find igs database================================================
Query_seq: PG0470:PG0471|PG0470:PG0471:hypothetical protein:hypothetical protein:<-->:511974..512427 454
ggactacagaaaagtcgcaccgtctcgtctgtcgggtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
Intra-Species Hit: Count: 2	Min: 1	Max: 454	Len: 454
Subject: NC_002950_PG0470_PG0471|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[511974,512427]|454
HSP  1	e-value: 1.0E-135	bit: 482.0	Len: 243	Query Start:212	Query End:454	Subject Strand: POSITIVE	Subject Start: 212	Subject End: 454
...................................................................................................................................................................................................................tggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
...................................................................................................................................................................................................................tggcgtgtactgagaagaattgacactcggagaggttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagcggtcacgcctgcctcggttctgaaaaatgtgtcggcagacagagaaaatgttactttgaaaatgttacctttgttccaaatagtcgtccgcttcggggcggctcctttttcactccg
HSP  2	e-value: 3.0E-13	bit: 77.8	Len: 39	Query Start:1	Query End:39	Subject Strand: POSITIVE	Subject Start: 1	Subject End: 39
ggactacagaaaagtcgcaccgtctcgtctgtcgggttt...............................................................................................................................................................................................................................................................................................................................................................................................................................
ggactacagaaaagtcgcaccgtctcgtctgtcgggttt...............................................................................................................................................................................................................................................................................................................................................................................................................................

Subject: NC_002950_PG1535_PG1536|transcriptional regulator, putative:cell division protein FtsX, putative|NEGATIVE:POSITIVE|[1614582,1616501]|1920
HSP  1	e-value: 3.0E-16	bit: 87.7	Len: 123	Query Start:215	Query End:337	Subject Strand: NEGATIVE	Subject Start: 1262	Subject End: 1384
......................................................................................................................................................................................................................cgtgtactgagaagaattgacactcggagag-gttaagttcgtgattacaattacagtgttttactccaaagtccgttataggtttacatcccttgctttttaagaagactttcgggtgacagc.....................................................................................................................
......................................................................................................................................................................................................................cgtgtactgaaaagagttgacactcggagagtgttaatttcgagattaaaattacagagattt-ctctaaagtccattatgggtttacacaccttactctttaagacgactttcggttgacagc.....................................................................................................................

Inter-species Hit: Count: 0

Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
GGACUACAGAAAAGUCGCACCGUCUCGUCUGUCGGGUUUGGAUUCGUUCACCAUUUUACGGACCAAAACUCACUCAUUUCUCGCCCCUGUUUUUCUAAAAAAUGGAACCAAAACUUUUUCGUUCCGGCGCGAGAAUUUUUUGUUUGCCGCGCCAAAAACAAAAAAUUUACGCGCCACGUUUUUUGGAGUAGCAAACGGGAAAAUUUUCGUGUGGCGUGUACUGAGAAGAAUUGACACUCGGAGAGGUUAAGUUCGUGAUUACAAUUACAGUGUUUUACUCCAAAGUCCGUUAUAGGUUUACAUCCCUUGCUUUUUAAGAAGACUUUCGGGUGACAGCGGUCACGCCUGCCUCGGUUCUGAAAAAUGUGUCGGCAGACAGAGAAAAUGUUACUUUGAAAAUGUUACCUUUGUUCCAAAUAGUCGUCCGCUUCGGGGCGGCUCCUUUUUCACUCCG
(((.......(((((.(((...(((((((((((((((((((.(((((..........))))))).)))))).((((...(.((((..((((.((((((((((((((((.(((....))).)))))((((((.(((((((((((((..........))))))))))))).))))))..))))))))))).)))).(((..(....)..)))..)))).)...)))).......(((((((((((((((..((..((((((...........((((((((((.((((((..(((.((((...........))))..)))...)))))).)))))).)))))))))).)))))))...))))).....)))))))))))).))))...))).)))))(((((((..((....))..))...((((((((......))))))))...)))))..))). (-134.00)

Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================
CGGAGUGAAAAAGGAGCCGCCCCGAAGCGGACGACUAUUUGGAACAAAGGUAACAUUUUCAAAGUAACAUUUUCUCUGUCUGCCGACACAUUUUUCAGAACCGAGGCAGGCGUGACCGCUGUCACCCGAAAGUCUUCUUAAAAAGCAAGGGAUGUAAACCUAUAACGGACUUUGGAGUAAAACACUGUAAUUGUAAUCACGAACUUAACCUCUCCGAGUGUCAAUUCUUCUCAGUACACGCCACACGAAAAUUUUCCCGUUUGCUACUCCAAAAAACGUGGCGCGUAAAUUUUUUGUUUUUGGCGCGGCAAACAAAAAAUUCUCGCGCCGGAACGAAAAAGUUUUGGUUCCAUUUUUUAGAAAAACAGGGGCGAGAAAUGAGUGAGUUUUGGUCCGUAAAAUGGUGAACGAAUCCAAACCCGACAGACGAGACGGUGCGACUUUUCUGUAGUCC
(((((.(((((.(..(((...(((((..((....)).)))))......)))..).))))).((((..(((..((((.(((((.((.....(((((.(((....((((.((.(((((....)))))))....))))))).))))).....((((....(((....(((((((((((((.........((..((((....)))))).......)))))).....(((((..((((...(.(((((.(((((((..((..(((..(((((..........))))))))..)).)))))))...))))).)............(((((((.(((((((.(((....))).))))).((((....))))...)).))))))).)))).)))))..))))))).....)))......)))).....)).)))))))))..)))..)))))))))...... (-117.79)

Find mRNA Target Using  Conserved IGS================================================
5'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
998	50	1	141	92	NC_002950:PG0470|5end_hypothetical_protein_511883..512113_NEGATIVE
557	260	211	174	124	NC_002950:PG1750|5end_alpha-1,3/4-fucosidase,_putative_1835323..1835553_POSITIVE
507	187	143	88	42	NC_002950:PG0313|5end_hypothetical_protein_347366..347596_POSITIVE
504	220	171	118	68	NC_002950:PG0080|5end_hypothetical_protein_93832..94062_NEGATIVE
498	200	151	51	2	NC_002950:PG1547|5end_hypothetical_protein_1624262..1624492_POSITIVE
491	179	131	93	45	NC_002950:PG1799|5end_hypothetical_protein_1894499..1894729_POSITIVE
446	190	141	90	41	NC_002950:PG2064|5end_hypothetical_protein_2160550..2160780_POSITIVE
446	186	148	150	111	NC_002950:PG1645|5end_ISPg5,_transposase_Orf1_1726062..1726292_NEGATIVE
415	157	115	93	51	NC_002950:PG1980|5end_hypothetical_protein_2067930..2068160_NEGATIVE
395	358	316	196	136	NC_002950:PG0771|5end_hypothetical_protein_824524..824754_POSITIVE
394	376	334	169	122	NC_002950:PG0203|5end_hypothetical_protein_240211..240441_NEGATIVE
385	245	209	158	121	NC_002950:PG1636|5end_FtsK/SpoIIIE_family_protein_1718460..1718690_NEGATIVE
385	255	211	163	119	NC_002950:PG0496|5end_hypothetical_protein_537168..537398_POSITIVE
384	359	325	60	16	NC_002950:PG0654|5end_hypothetical_protein_706685..706915_NEGATIVE
383	62	23	106	70	NC_002950:PG0737|5end_hypothetical_protein_786188..786418_POSITIVE
382	160	115	95	51	NC_002950:PG0174|5end_pyridine_nucleotide-disulphide_oxidoreductase_family_protein_197628..197858_NEGATIVE
380	242	205	230	184	NC_002950:PG0300|5end_TPR_domain_protein_336570..336800_POSITIVE
377	370	326	59	2	NC_002950:PG0143|5end_hydrolase,_carbon-nitrogen_family_166625..166855_NEGATIVE
372	350	303	89	48	NC_002950:PG1511|5end_hypothetical_protein_1587609..1587839_POSITIVE
371	186	148	118	82	NC_002950:PG1617|5end_hypothetical_protein_1697755..1697985_NEGATIVE

3'END mRNA Target Prediction===================================
Score	srna_start	srna_end	target_start	tegart_end	seq_id
554	260	212	64	6	NC_002950:PG0294|3end_glycosyl_transferase,_group_2_family_protein_329271..329421_NEGATIVE
498	200	151	64	15	NC_002950:PG1546|3end_hypothetical_protein_1624355..1624505_POSITIVE
394	376	334	118	71	NC_002950:PG0204|3end_hypothetical_protein_240262..240412_NEGATIVE
383	62	23	131	95	NC_002950:PG0736|3end_ribonuclease_HII_786293..786443_POSITIVE
380	46	1	151	89	NC_002950:PG1675|3end_hypothetical_protein_1760360..1760510_POSITIVE
374	338	293	108	65	NC_002950:PG1710|3end_ISPg5,_transposase_Orf2_1796375..1796525_POSITIVE
374	338	293	108	65	NC_002950:PG1420|3end_ISPg5,_transposase_Orf2_1506464..1506614_POSITIVE
374	338	293	108	65	NC_002950:PG0943|3end_ISPg5,_transposase_Orf2_1003530..1003680_POSITIVE
374	338	293	108	65	NC_002950:PG0426|3end_ISPg5,_transposase_Orf2_464160..464310_NEGATIVE
370	348	302	144	80	NC_002950:PG0065|3end_efflux_transporter,_RND_family,_MFP_subunit_80213..80363_NEGATIVE
364	370	323	75	36	NC_002950:PG0461|3end_ISPg7,_transposase_503439..503589_NEGATIVE
359	188	148	62	22	NC_002950:PG0542|3end_hypothetical_protein_595377..595527_NEGATIVE
355	168	122	45	1	NC_002950:PG1626|3end_hypothetical_protein_1710486..1710636_POSITIVE
353	46	1	140	85	NC_002950:PG0443|3end_hemagglutinin-related_protein_483147..483297_POSITIVE
351	375	336	43	4	NC_002950:PG2110|3end_thiamine_biosynthesis_protein_ThiC_2219449..2219599_NEGATIVE
348	338	293	108	65	NC_002950:PG2057|3end_ISPg5,_transposase_Orf2_2155009..2155159_NEGATIVE
348	338	293	108	65	NC_002950:PG1644|3end_ISPg5,_transposase_Orf2_1724681..1724831_NEGATIVE
348	378	335	63	20	NC_002950:PG1162|3end_ATP:cob(I)alamin_adenosyltransferase,_putative_1241473..1241623_NEGATIVE
345	350	305	60	17	NC_002950:PG0375|3end_50S_ribosomal_protein_L13_406469..406619_POSITIVE
342	344	303	99	53	NC_002950:PG1614|3end_succinate_dehydrogenase_1693800..1693950_NEGATIVE