Origin IGS: agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcccgaatacgttgccaatcgataagcatatcgacttggttcgaaaatacattccgtgctttcctgtatcgattcgctgacatgacgtccctgaacgaaacctcttcgtcggatgattttccttgtcgtgccatcgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 atatttctaattgtcgttatctgttttttccgtttaatctaaatatacacaaaggtagactttttgagacctttgcacaataagcaggcactttatccatttatccattcattttattgtgtgtcggccgattgttttgtgtgtttatggtatgatcaatgacacaaaacgatggcacgacaaggaaaatcatccgacgaagaggtttcgttcagggacgtcatgtcagcgaatcgatacaggaaagcacggaatgtattttcgaaccaagtcgatatgcttatcgattggcaacgtattcgggcactgctctctattcacttggcagccatacacctactcattgatctttccttgagatacaaagaatgaacttccacgagaggatactatgatctcacatgagaggatactatggtctcatatgagaggatactatggtctcaaatgagaggatactatggtctcctatgagaggatactatagtctcacatgagaggatactatggtctcatatgagaggatactatggtctcacatgagaggatactatggtctcatatgagaggatactatggtctcacatgagaggatact Mask Tandem Repeat Region ================================================ nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcccgaatacgttgccaatcgataagcatatcgacttggttcgaaaatacattccgtgctttcctgtatcgattcgctgacatgacgtccctgaacgaaacctcttcgtcggatgattttccttgtcgtgccatcgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Find is-nt database================================================ Query_seq: PG0265:PG0267|PG0265:PG0267:hypothetical protein:arginyl-tRNA synthetase:<-->:298642..299239 598 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcccgaatacgttgccaatcgataagcatatcgacttggttcgaaaatacattccgtgctttcctgtatcgattcgctgacatgacgtccctgaacgaaacctcttcgtcggatgattttccttgtcgtgccatcgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG0265:PG0267|PG0265:PG0267:hypothetical protein:arginyl-tRNA synthetase:<-->:298642..299239 598 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcccgaatacgttgccaatcgataagcatatcgacttggttcgaaaatacattccgtgctttcctgtatcgattcgctgacatgacgtccctgaacgaaacctcttcgtcggatgattttccttgtcgtgccatcgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 14 Min: 296 Max: 427 Len: 132 Subject: gi|34540041|ref|NP_904520.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34540602|ref|NP_905081.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34540772|ref|NP_905251.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34540899|ref|NP_905378.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34540911|ref|NP_905390.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34541119|ref|NP_905598.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34541274|ref|NP_905753.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34541511|ref|NP_905990.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: UniRef90_Q9ZNB4 Cluster: Insertion sequence IS1126-like gene; n=2; Porphyromonas gingivalis|Rep: Insertion sequence IS1126-like gene - Porphyromonas gingivalis (Bacteroides gingivalis) HSP 1 e-value: 1.0E-8 bit: 56.2 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D T L I D W R P I R ........................................................................................................................................................................... Subject: gi|34541013|ref|NP_905492.1| ISPg1, transposase, internal deletion [Porphyromonas gingivalis W83] HSP 1 e-value: 2.0E-8 bit: 55.8 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A C Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V D R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34540279|ref|NP_904758.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 4.0E-8 bit: 54.7 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V E R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34540363|ref|NP_904842.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 4.0E-8 bit: 54.7 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V E R L I D W R P I R ........................................................................................................................................................................... Subject: gi|34540950|ref|NP_905429.1| ISPg1, transposase [Porphyromonas gingivalis W83] HSP 1 e-value: 4.0E-8 bit: 54.7 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A L L S K R Y R K A Q N D F L N Q V E R L I D W R P I R ........................................................................................................................................................................... Subject: UniRef90_Q9ZA61 Cluster: Transposase; n=4; Porphyromonas gingivalis|Rep: Transposase - Porphyromonas gingivalis (Bacteroides gingivalis) HSP 1 e-value: 3.0E-7 bit: 52.0 Len: 132 Query Start:296 Query End:427 Subject Strand: null Subject Start: 1 Subject End: 44 ....................................................................................................................................................................................................................................................................................................... M A R Q G K S S D E E V S F R D V M S A N R Y R K A R N V F S N Q V D M L I D W Q R I R ........................................................................................................................................................................... ....................................................................................................................................................................................................................................................................................................... M A Y Q S K N T D E H V T F A D A F L S K R Y R K A Q N D F L I Q V D R L I D W R P I R ........................................................................................................................................................................... Find nr database================================================ Query_seq: PG0265:PG0267|PG0265:PG0267:hypothetical protein:arginyl-tRNA synthetase:<-->:298642..299239 598 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Predict ORF larger than 30AA ================================================ Protein_Len: 36 Strand: + Start: 263 End: 370 ...................................................................................................................................................................................................................................................................... M Y G C Q V N R E Q C P N T L P I D K H I D L V R K Y I P C F P V S I R .................................................................................................................................................................................................................................... Protein_Len: 53 Strand: + Start: 282 End: 440 ......................................................................................................................................................................................................................................................................................... M E S S A R I R C Q S I S I S T W F E N T F R A F L Y R F A D M T S L N E T S S S D D F P C R A I V L C H .............................................................................................................................................................. Protein_Len: 30 Strand: + Start: 406 End: 495 ..................................................................................................................................................................................................................................................................................................................................................................................................................... M I F L V V P S F C V I D H T I N T Q N N R P T H N K M N G ....................................................................................................... Protein_Len: 39 Strand: - Start: 440 End: 556 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................... Q D Y W L C V F C D A S V C Y F S H I F P Y L A Q K N H L P R L F D V K T Y M .......................................... Protein_Len: 60 Strand: - Start: 255 End: 440 .............................................................................................................................................................................................................................................................. P T H S G L S Y L A T G S Y T A L R Y A Y R S P E F I C E T S E Q I S E S V H R G Q V F G R R R I I K R T T G D N Q T M .............................................................................................................................................................. Protein_Len: 60 Strand: - Start: 244 End: 519 ................................................................................................................................................................................................................................................... Y M G H K G T D I R Q C S T G S R F R K T P H N E K D H W R K T D N I M G Y V C L V I P R C V I F H I S L H I F H R S M ............................................................................... Protein_Len: 60 Strand: - Start: 230 End: 427 ..................................................................................................................................................................................................................................... L D I L L H I A A L H I S L L A R I R Q W D I L M D V Q N S F V N R A K R Y R N A S M V D R F S V E E D S S K G Q R A M ........................................................................................................................................................................... agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Predict TransTerm conf > 70================================================ Find igs database================================================ Query_seq: PG0265:PG0267|PG0265:PG0267:hypothetical protein:arginyl-tRNA synthetase:<-->:298642..299239 598 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Intra-Species Hit: Count: 13 Min: 1 Max: 598 Len: 598 Subject: NC_002950_PG0265_PG0267|hypothetical protein:arginyl-tRNA synthetase|NEGATIVE:POSITIVE|[298642,299239]|598 HSP 1 e-value: 1.0E-166 bit: 585.0 Len: 295 Query Start:1 Query End:295 Subject Strand: POSITIVE Subject Start: 1 Subject End: 295 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgc............................................................................................................................................................................................................................................................................................................... agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagagagcagtgc............................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 7.0E-92 bit: 339.0 Len: 171 Query Start:428 Query End:598 Subject Strand: POSITIVE Subject Start: 428 Subject End: 598 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................cgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat ...........................................................................................................................................................................................................................................................................................................................................................................................................................................cgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctcaaaaagtctacctttgtgtatatttagattaaacggaaaaaacagataacgacaattagaaatat Subject: NC_002950_PG0088_PG0090|peptidase, M16 family:Dps family protein|POSITIVE:POSITIVE|[104633,105663]|1031 HSP 1 e-value: 1.0E-109 bit: 396.0 Len: 272 Query Start:17 Query End:288 Subject Strand: POSITIVE Subject Start: 428 Subject End: 699 ................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagaga...................................................................................................................................................................................................................................................................................................................... ................agaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgcgagaccatagtatcctctcatgcgagaccatagtatcctctcgtataagaccatagtatcctctcgtggaagttcattctttgtatctcagggaaagatcaatgagcaggtgtatggctgccaagtaaacagaga...................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-87 bit: 323.0 Len: 195 Query Start:1 Query End:195 Subject Strand: POSITIVE Subject Start: 435 Subject End: 629 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctc................................................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgcgagaccatagtatcctctcatgcgagaccatagtatcctctcgtataagaccatagtatcctctc................................................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG1426_PG1427|hypothetical protein:thiol protease/hemagglutinin PrtT precursor, putative|NEGATIVE:NEGATIVE|[1511401,1511954]|554 HSP 1 e-value: 1.0E-108 bit: 392.0 Len: 286 Query Start:3 Query End:288 Subject Strand: POSITIVE Subject Start: 3 Subject End: 288 ..tatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagaga...................................................................................................................................................................................................................................................................................................................... ..tatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcataggagttcattctttgtatctcagggaaagaccaatgagcaggtgtatggctgccaagtaaacagaga...................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-81 bit: 303.0 Len: 197 Query Start:1 Query End:197 Subject Strand: POSITIVE Subject Start: 24 Subject End: 220 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcat................................................................................................................................................................................................................................................................................................................................................................................................................. agtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcat................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 3 e-value: 2.0E-70 bit: 268.0 Len: 175 Query Start:1 Query End:175 Subject Strand: POSITIVE Subject Start: 47 Subject End: 221 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcata....................................................................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcata....................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 2.0E-52 bit: 208.0 Len: 133 Query Start:1 Query End:133 Subject Strand: POSITIVE Subject Start: 93 Subject End: 225 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggag................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. agtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcatacgagaccatagtatcctctcataggag................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_002950_PG1714_PG1715|pyridoxamine-phosphate oxidase:hypothetical protein|NEGATIVE:NEGATIVE|[1802583,1803482]|900 HSP 1 e-value: 5.0E-96 bit: 353.0 Len: 218 Query Start:1 Query End:218 Subject Strand: NEGATIVE Subject Start: 321 Subject End: 538 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 3.0E-91 bit: 337.0 Len: 218 Query Start:1 Query End:218 Subject Strand: NEGATIVE Subject Start: 298 Subject End: 515 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatacgagaccatagtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 3.0E-88 bit: 327.0 Len: 197 Query Start:1 Query End:197 Subject Strand: NEGATIVE Subject Start: 296 Subject End: 492 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcat................................................................................................................................................................................................................................................................................................................................................................................................................. agtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcat................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 4.0E-84 bit: 313.0 Len: 202 Query Start:17 Query End:218 Subject Strand: NEGATIVE Subject Start: 344 Subject End: 545 ................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ ................agaccatagtatcctctcatgtgagaccatagtatcctctcatacgagaccatagtatcctctcatgtaagaccatagtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 1.0E-80 bit: 301.0 Len: 176 Query Start:1 Query End:176 Subject Strand: NEGATIVE Subject Start: 294 Subject End: 469 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatat...................................................................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatgtaagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcatat...................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 6 e-value: 1.0E-47 bit: 192.0 Len: 105 Query Start:428 Query End:532 Subject Strand: NEGATIVE Subject Start: 78 Subject End: 182 ...........................................................................................................................................................................................................................................................................................................................................................................................................................................cgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtct.................................................................. ...........................................................................................................................................................................................................................................................................................................................................................................................................................................cgttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgcacaaaggtct.................................................................. Subject: NC_002950_PG1556_PG1559|hypothetical protein:aminomethyltransferase|POSITIVE:NEGATIVE|[163706 2,1637993]|932 HSP 1 e-value: 7.0E-92 bit: 339.0 Len: 255 Query Start:1 Query End:255 Subject Strand: NEGATIVE Subject Start: 249 Subject End: 503 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaa....................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcatgagagaccataatatcctctcgtatgggttcattctttgtatctccgggaaagatcaa....................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 2.0E-85 bit: 317.0 Len: 216 Query Start:3 Query End:218 Subject Strand: NEGATIVE Subject Start: 332 Subject End: 547 ..tatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ ..tatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctcatgcgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 4.0E-84 bit: 313.0 Len: 218 Query Start:1 Query End:218 Subject Strand: NEGATIVE Subject Start: 309 Subject End: 526 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 4.0E-84 bit: 313.0 Len: 218 Query Start:1 Query End:218 Subject Strand: NEGATIVE Subject Start: 355 Subject End: 572 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcgtatgagaccataatatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctcatgtgagaccataatatcttctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 4.0E-84 bit: 313.0 Len: 202 Query Start:17 Query End:218 Subject Strand: NEGATIVE Subject Start: 378 Subject End: 579 ................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ ................agaccatagtatcctctcgtatgagaccataatatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctcttatgtgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 6 e-value: 1.0E-62 bit: 242.0 Len: 158 Query Start:63 Query End:220 Subject Strand: NEGATIVE Subject Start: 422 Subject End: 579 ..............................................................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... ..............................................................agaccatagtatcctctcgtatgagaccataatatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG1117_PG1118|MATE efflux family protein:clpB protein|POSITIVE:NEGATIVE|[1191602,1192172]|571 HSP 1 e-value: 1.0E-90 bit: 335.0 Len: 217 Query Start:1 Query End:217 Subject Strand: NEGATIVE Subject Start: 218 Subject End: 434 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctct............................................................................................................................................................................................................................................................................................................................................................................................. agtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctct............................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-83 bit: 311.0 Len: 197 Query Start:22 Query End:218 Subject Strand: NEGATIVE Subject Start: 240 Subject End: 436 .....................atagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ .....................atagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 2.0E-70 bit: 268.0 Len: 195 Query Start:1 Query End:195 Subject Strand: NEGATIVE Subject Start: 194 Subject End: 388 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctc................................................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctcttatataagactatactattctctc................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 2.0E-64 bit: 248.0 Len: 153 Query Start:68 Query End:220 Subject Strand: NEGATIVE Subject Start: 284 Subject End: 436 ...................................................................atagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... ...................................................................atagtatcctctcatatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG1389_PG1391|DNA-binding protein, histone-like family:hypothetical protein|NEGATIVE:POSITIVE|[1471419,1471809]|391 HSP 1 e-value: 3.0E-88 bit: 327.0 Len: 197 Query Start:22 Query End:218 Subject Strand: POSITIVE Subject Start: 99 Subject End: 295 .....................atagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ .....................atagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctctcgtgtgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 1.0E-87 bit: 325.0 Len: 212 Query Start:1 Query End:212 Subject Strand: POSITIVE Subject Start: 124 Subject End: 335 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtat.................................................................................................................................................................................................................................................................................................................................................................................................. agtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctctcgtgtgagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtat.................................................................................................................................................................................................................................................................................................................................................................................................. HSP 3 e-value: 2.0E-86 bit: 321.0 Len: 218 Query Start:1 Query End:218 Subject Strand: POSITIVE Subject Start: 101 Subject End: 318 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctctcgtgtgagaccatagtatcctctcataggagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 2.0E-76 bit: 287.0 Len: 177 Query Start:45 Query End:221 Subject Strand: POSITIVE Subject Start: 99 Subject End: 275 ............................................atagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtg......................................................................................................................................................................................................................................................................................................................................................................................... ............................................atagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatatgagaccatagtattctctcatatgagaccatagtatcctctcgtg......................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 9.0E-39 bit: 163.0 Len: 106 Query Start:113 Query End:218 Subject Strand: POSITIVE Subject Start: 98 Subject End: 203 ................................................................................................................tatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ ................................................................................................................tatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatgtgagaccatagtatcctctcataggagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_002950_PG2159_PG2161|protoporphyrinogen oxidase:transcriptional regulator, AraC family|POSITIVE:NEGATIVE|[2265935,2266806]|872 HSP 1 e-value: 1.0E-84 bit: 315.0 Len: 219 Query Start:3 Query End:221 Subject Strand: POSITIVE Subject Start: 323 Subject End: 541 ..tatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtg......................................................................................................................................................................................................................................................................................................................................................................................... ..tatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtg......................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 1.0E-80 bit: 301.0 Len: 220 Query Start:1 Query End:220 Subject Strand: POSITIVE Subject Start: 298 Subject End: 517 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatgtgagaccataatatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-79 bit: 297.0 Len: 218 Query Start:1 Query End:218 Subject Strand: POSITIVE Subject Start: 367 Subject End: 584 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 3.0E-72 bit: 274.0 Len: 218 Query Start:1 Query End:218 Subject Strand: POSITIVE Subject Start: 344 Subject End: 561 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtgtaagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 1.0E-71 bit: 272.0 Len: 197 Query Start:21 Query End:217 Subject Strand: POSITIVE Subject Start: 295 Subject End: 491 ....................catagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctct............................................................................................................................................................................................................................................................................................................................................................................................. ....................catagtatcctctcatgtgagaccataatatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctct............................................................................................................................................................................................................................................................................................................................................................................................. HSP 6 e-value: 2.0E-70 bit: 268.0 Len: 199 Query Start:1 Query End:199 Subject Strand: POSITIVE Subject Start: 390 Subject End: 588 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgt............................................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctcatgtgagaccatagtatcctcttatgtgagaccatagtatcctctcgtatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtatcctctcatgt............................................................................................................................................................................................................................................................................................................................................................................................................... HSP 7 e-value: 2.0E-58 bit: 228.0 Len: 175 Query Start:44 Query End:218 Subject Strand: POSITIVE Subject Start: 295 Subject End: 469 ...........................................catagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ ...........................................catagtatcctctcatgtgagaccataatatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcataggagaccatagtattctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 8 e-value: 9.0E-45 bit: 182.0 Len: 132 Query Start:90 Query End:221 Subject Strand: POSITIVE Subject Start: 295 Subject End: 426 .........................................................................................catagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtg......................................................................................................................................................................................................................................................................................................................................................................................... .........................................................................................catagtatcctctcatgtgagaccataatatcctctcatatgagaccatagtatcctctcgtgtaagaccatagtatcctctcatgtgagagcatagtatcctctcatatgagaccatagtatcctctcgtg......................................................................................................................................................................................................................................................................................................................................................................................... HSP 9 e-value: 1.0E-28 bit: 129.0 Len: 105 Query Start:430 Query End:534 Subject Strand: POSITIVE Subject Start: 704 Subject End: 808 .............................................................................................................................................................................................................................................................................................................................................................................................................................................ttttgtgtcattgatcataccataaacacacaaaacaatcggccgacacacaataaaatgaatggataaatggataaagtgcctgcttattgtgcaaaggtctca................................................................ .............................................................................................................................................................................................................................................................................................................................................................................................................................................ttttgtgtcattgatcataccataaacacacaaaacaatcgaccgacacagtgtaaaatgaaaggataaagggataaagggcctgcttattgccgaaaggtctca................................................................ Subject: NC_002950_PG0626_PG0627|hypothetical protein:RNA-binding protein|POSITIVE:NEGATIVE|[680407,681231]|825 HSP 1 e-value: 4.0E-84 bit: 313.0 Len: 218 Query Start:1 Query End:218 Subject Strand: NEGATIVE Subject Start: 331 Subject End: 548 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 2 e-value: 9.0E-82 bit: 305.0 Len: 218 Query Start:1 Query End:218 Subject Strand: NEGATIVE Subject Start: 308 Subject End: 525 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 3 e-value: 1.0E-80 bit: 301.0 Len: 220 Query Start:1 Query End:220 Subject Strand: NEGATIVE Subject Start: 237 Subject End: 456 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 1.0E-80 bit: 301.0 Len: 220 Query Start:1 Query End:220 Subject Strand: NEGATIVE Subject Start: 283 Subject End: 502 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctcataggagaccatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 1.0E-80 bit: 301.0 Len: 204 Query Start:17 Query End:220 Subject Strand: NEGATIVE Subject Start: 352 Subject End: 555 ................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... ................agaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... HSP 6 e-value: 6.0E-77 bit: 289.0 Len: 218 Query Start:1 Query End:218 Subject Strand: NEGATIVE Subject Start: 262 Subject End: 479 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcgtatgagaccatagtatcctctcatagtagaccatagtatcctctcgtatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctcatgtgagaccatagtattctctcataggagaccatagtatcctctcgtatgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_002950_PG0493_PG0494|hypothetical protein:hypothetical protein|NEGATIVE:NEGATIVE|[534991,535183]|193 HSP 1 e-value: 2.0E-83 bit: 311.0 Len: 193 Query Start:24 Query End:216 Subject Strand: POSITIVE Subject Start: 1 Subject End: 193 .......................agtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctc.............................................................................................................................................................................................................................................................................................................................................................................................. .......................agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc.............................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 2.0E-76 bit: 287.0 Len: 193 Query Start:1 Query End:193 Subject Strand: POSITIVE Subject Start: 1 Subject End: 193 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctc..................................................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcatgtgagaccatagtatcctc..................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 4.0E-59 bit: 230.0 Len: 172 Query Start:47 Query End:218 Subject Strand: POSITIVE Subject Start: 1 Subject End: 172 ..............................................agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ ..............................................agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ HSP 4 e-value: 2.0E-24 bit: 115.0 Len: 82 Query Start:139 Query End:220 Subject Strand: POSITIVE Subject Start: 1 Subject End: 82 ..........................................................................................................................................agtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... ..........................................................................................................................................agtatcctctcataggagaccatagtatcctctcatgcgagaccatagtatcctctcatatgagaccatagtatcctctcgt.......................................................................................................................................................................................................................................................................................................................................................................................... Subject: NC_002950_PG0585_PG0587|YqeY family protein:yadS protein|POSITIVE:NEGATIVE|[643862,644701]|840 HSP 1 e-value: 9.0E-79 bit: 295.0 Len: 249 Query Start:40 Query End:288 Subject Strand: NEGATIVE Subject Start: 239 Subject End: 487 .......................................agaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctcgtggaagttcattctttgtatctcaaggaaagatcaatgagtaggtgtatggctgccaagtgaatagaga...................................................................................................................................................................................................................................................................................................................... .......................................agaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcataggagaccattctttgtatctcggggaaagatcaatgagcaggtttatggctgccaagtaaacagaga...................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 3.0E-66 bit: 254.0 Len: 184 Query Start:1 Query End:184 Subject Strand: NEGATIVE Subject Start: 297 Subject End: 480 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccat.............................................................................................................................................................................................................................................................................................................................................................................................................................. agtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcataggagaccat.............................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 3 e-value: 2.0E-64 bit: 248.0 Len: 181 Query Start:17 Query End:197 Subject Strand: NEGATIVE Subject Start: 307 Subject End: 487 ................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcat................................................................................................................................................................................................................................................................................................................................................................................................................. ................agaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcgtatgagaccatagtatcctctcataggagaccatagtatcctctcgtaggagaccatagtatcctctcat................................................................................................................................................................................................................................................................................................................................................................................................................. Subject: NC_002950_PG0197_PG0198|hypothetical protein:hypothetical protein|NEGATIVE:POSITIVE|[236295,237021]|727 HSP 1 e-value: 3.0E-60 bit: 234.0 Len: 154 Query Start:40 Query End:193 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 154 .......................................agaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctc..................................................................................................................................................................................................................................................................................................................................................................................................................... .......................................agaccatagtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggggaccatagtatcctc..................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 2 e-value: 4.0E-56 bit: 220.0 Len: 147 Query Start:1 Query End:147 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 147 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctc................................................................................................................................................................................................................................................................................................................................................................................................................................................................... agtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggggaccatagtatcctc................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-55 bit: 218.0 Len: 154 Query Start:63 Query End:216 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 154 ..............................................................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctc.............................................................................................................................................................................................................................................................................................................................................................................................. ..............................................................agaccatagtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggggaccatagtatcctc.............................................................................................................................................................................................................................................................................................................................................................................................. HSP 4 e-value: 2.0E-55 bit: 218.0 Len: 154 Query Start:17 Query End:170 Subject Strand: NEGATIVE Subject Start: 1 Subject End: 154 ................agaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctc............................................................................................................................................................................................................................................................................................................................................................................................................................................ ................agaccatagtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctcataggggaccatagtatcctc............................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 5 e-value: 4.0E-50 bit: 200.0 Len: 133 Query Start:86 Query End:218 Subject Strand: NEGATIVE Subject Start: 22 Subject End: 154 .....................................................................................agaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ .....................................................................................agaccatagtatcctctcatgcgagaccatagtatcctctcataggagaccatagtatcctctcataggagactatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ Subject: NC_002950_PG0807_PG0809|NusB family protein:hypothetical protein|NEGATIVE:NEGATIVE|[864815,865153]|339 HSP 1 e-value: 3.0E-26 bit: 121.0 Len: 65 Query Start:36 Query End:100 Subject Strand: POSITIVE Subject Start: 139 Subject End: 203 ...................................tatgagaccatagtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcct.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. ...................................tatgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 2 e-value: 4.0E-22 bit: 107.0 Len: 62 Query Start:131 Query End:192 Subject Strand: POSITIVE Subject Start: 142 Subject End: 203 ..................................................................................................................................gagaccatagtatcctctcatttgagaccatagtatcctctcatatgagaccatagtatcct...................................................................................................................................................................................................................................................................................................................................................................................................................... ..................................................................................................................................gagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct...................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 3 e-value: 2.0E-21 bit: 105.0 Len: 65 Query Start:82 Query End:146 Subject Strand: POSITIVE Subject Start: 139 Subject End: 203 .................................................................................tatgagaccatagtatcctctcatgtgagactatagtatcctctcataggagaccatagtatcct.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... .................................................................................tatgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 4 e-value: 3.0E-20 bit: 101.0 Len: 63 Query Start:15 Query End:77 Subject Strand: POSITIVE Subject Start: 141 Subject End: 203 ..............tgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagaccatagtatcct......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ..............tgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 5 e-value: 1.0E-19 bit: 99.6 Len: 54 Query Start:1 Query End:54 Subject Strand: POSITIVE Subject Start: 150 Subject End: 203 agtatcctctcatgtgagaccatagtatcctctcatatgagaccatagtatcct................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ agtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ HSP 6 e-value: 7.0E-18 bit: 93.7 Len: 63 Query Start:61 Query End:123 Subject Strand: POSITIVE Subject Start: 141 Subject End: 203 ............................................................tgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagactatagtatcct........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................tgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... HSP 7 e-value: 7.0E-18 bit: 93.7 Len: 63 Query Start:153 Query End:215 Subject Strand: POSITIVE Subject Start: 141 Subject End: 203 ........................................................................................................................................................tgagaccatagtatcctctcatatgagaccatagtatcctctcatgtgagatcatagtatcct............................................................................................................................................................................................................................................................................................................................................................................................... ........................................................................................................................................................tgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct............................................................................................................................................................................................................................................................................................................................................................................................... HSP 8 e-value: 2.0E-15 bit: 85.7 Len: 63 Query Start:107 Query End:169 Subject Strand: POSITIVE Subject Start: 141 Subject End: 203 ..........................................................................................................tgagactatagtatcctctcataggagaccatagtatcctctcatttgagaccatagtatcct............................................................................................................................................................................................................................................................................................................................................................................................................................................. ..........................................................................................................tgagaccatagtatcctctcatgttagaccatagtatcctctcatatgagaccatagtatcct............................................................................................................................................................................................................................................................................................................................................................................................................................................. HSP 9 e-value: 6.0E-12 bit: 73.8 Len: 45 Query Start:174 Query End:218 Subject Strand: POSITIVE Subject Start: 139 Subject End: 183 .............................................................................................................................................................................tatgagaccatagtatcctctcatgtgagatcatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ .............................................................................................................................................................................tatgagaccatagtatcctctcatgttagaccatagtatcctctc............................................................................................................................................................................................................................................................................................................................................................................................ Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AGUAUCCUCUCAUGUGAGACCAUAGUAUCCUCUCAUAUGAGACCAUAGUAUCCUCUCAUGUGAGACCAUAGUAUCCUCUCAUAUGAGACCAUAGUAUCCUCUCAUGUGAGACUAUAGUAUCCUCUCAUAGGAGACCAUAGUAUCCUCUCAUUUGAGACCAUAGUAUCCUCUCAUAUGAGACCAUAGUAUCCUCUCAUGUGAGAUCAUAGUAUCCUCUCGUGGAAGUUCAUUCUUUGUAUCUCAAGGAAAGAUCAAUGAGUAGGUGUAUGGCUGCCAAGUGAAUAGAGAGCAGUGCCCGAAUACGUUGCCAAUCGAUAAGCAUAUCGACUUGGUUCGAAAAUACAUUCCGUGCUUUCCUGUAUCGAUUCGCUGACAUGACGUCCCUGAACGAAACCUCUUCGUCGGAUGAUUUUCCUUGUCGUGCCAUCGUUUUGUGUCAUUGAUCAUACCAUAAACACACAAAACAAUCGGCCGACACACAAUAAAAUGAAUGGAUAAAUGGAUAAAGUGCCUGCUUAUUGUGCAAAGGUCUCAAAAAGUCUACCUUUGUGUAUAUUUAGAUUAAACGGAAAAAACAGAUAACGACAAUUAGAAAUAU .((((.(((((.(((((((..(((.(((..((((((((((((..(((.(((..((((((((((((...........))))))))))))..))).)))..))))))))))))..))).)))..)))))))((((.(((((.((((..((((((.((((..(((.(((..((((((((((((...........))))))))))))..))).)))..))))........((.(((((((.....))))))).))..))))))..))))))))))).)).........)))))..)))).((....((..(((((((((((....)))))).))))).))........(((((((((((((..((((.(((((.........(((((....(((((.....))))).)))))........(((((.(((((.(((((((((...((.......)).....))))))))).)).))))))))..........))))).))))...)))..))))..(((..(((.(..(((((((..(.....)...)))))))..))))..))).....))))))...........)).............. (-181.30) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ AUAUUUCUAAUUGUCGUUAUCUGUUUUUUCCGUUUAAUCUAAAUAUACACAAAGGUAGACUUUUUGAGACCUUUGCACAAUAAGCAGGCACUUUAUCCAUUUAUCCAUUCAUUUUAUUGUGUGUCGGCCGAUUGUUUUGUGUGUUUAUGGUAUGAUCAAUGACACAAAACGAUGGCACGACAAGGAAAAUCAUCCGACGAAGAGGUUUCGUUCAGGGACGUCAUGUCAGCGAAUCGAUACAGGAAAGCACGGAAUGUAUUUUCGAACCAAGUCGAUAUGCUUAUCGAUUGGCAACGUAUUCGGGCACUGCUCUCUAUUCACUUGGCAGCCAUACACCUACUCAUUGAUCUUUCCUUGAGAUACAAAGAAUGAACUUCCACGAGAGGAUACUAUGAUCUCACAUGAGAGGAUACUAUGGUCUCAUAUGAGAGGAUACUAUGGUCUCAAAUGAGAGGAUACUAUGGUCUCCUAUGAGAGGAUACUAUAGUCUCACAUGAGAGGAUACUAUGGUCUCAUAUGAGAGGAUACUAUGGUCUCACAUGAGAGGAUACUAUGGUCUCAUAUGAGAGGAUACUAUGGUCUCACAUGAGAGGAUACU ((((((...((((.((..(........)..))..))))..)))))).......((((..((((((((((((.((((.......))))......(((((.(((((...((((((((....((((((.(((.(((((((((((((((.((......)).))).)))))))))))))))....((((((((((((...((((..((.((..(.....)..)).)).)))).((.((((((((..(.......).....((((..((((......)))).)))).)))))))).))...((((...(((..((((............)))))))))))..........)))).)))))))).)))))).)))))))).......((((..(((.(((..(((((..(((((..(((.(((..((((((((((((..(((.(((..(((((..(((((.....(((((((.((((.....)))).))))))))))))..)))))..))).)))..))))))))))))..))).)))..)))))..)))))..))).)))..))))..))))).)))))....)))))))...)))))..)))) (-174.20) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 932 90 41 158 109 NC_002950:PG1426|5end_hypothetical_protein_1511310..1511540_NEGATIVE 932 90 41 135 86 NC_002950:PG0265|5end_hypothetical_protein_298551..298781_NEGATIVE 928 90 41 158 109 NC_002950:PG0493|5end_hypothetical_protein_534900..535130_NEGATIVE 784 460 411 204 155 NC_002950:PG1549|5end_hypothetical_protein_1627947..1628177_NEGATIVE 757 109 61 231 183 NC_002950:PG1389|5end_DNA-binding_protein,_histone-like_family_1471328..1471558_NEGATIVE 541 533 498 58 23 NC_002950:PG0494|5end_hypothetical_protein_535366..535596_NEGATIVE 411 383 342 230 184 NC_002950:PG0064|5end_heavy_metal_efflux_pump,_CzcA_family_80193..80423_NEGATIVE 403 288 245 210 168 NC_002950:PG0602|5end_hypothetical_protein_658500..658730_POSITIVE 369 309 268 164 121 NC_002950:PG1482|5end_conjugative_transposon_protein_TraF_1558779..1559009_NEGATIVE 363 308 265 60 13 NC_002950:PG1946|5end_ABC_3_transporter_family_protein_2032133..2032363_POSITIVE 363 440 394 91 40 NC_002950:PG1728|5end_cytidine/deoxycytidylate_deaminase_family_protein_1817644..1817874_POSITIVE 360 404 361 215 167 NC_002950:PG1125|5end_hypothetical_protein_1201727..1201957_NEGATIVE 350 336 293 182 138 NC_002950:PG1387|5end_hypothetical_protein_1470058..1470288_NEGATIVE 342 429 382 189 148 NC_002950:PG0335|5end_tRNA_delta(2)-isopentenylpyrophosphate_transferase_370706..370936_NEGATIVE 341 100 54 179 128 NC_002950:PG0197|5end_hypothetical_protein_236204..236434_NEGATIVE 338 291 251 71 20 NC_002950:PG0650|5end_hypothetical_protein_702964..703194_NEGATIVE 337 314 273 71 30 NC_002950:PG0631|5end_MotA/TolQ/ExbB_proton_channel_family_protein_684266..684496_POSITIVE 334 430 383 222 166 NC_002950:PG1053|5end_transcriptional_regulator,_putative_1120065..1120295_POSITIVE 333 400 356 192 137 NC_002950:PG0171|5end_5'-nucleotidase_family_protein_191724..191954_POSITIVE 331 424 381 188 146 NC_002950:PG0517|5end_hypothetical_protein_562097..562327_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 915 150 101 116 67 NC_002950:PG0494|3end_hypothetical_protein_535094..535244_NEGATIVE 534 520 471 72 29 NC_002950:PG1364|3end_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_1444388..1444538_NEGATIVE 366 336 292 151 100 NC_002950:PG1134|3end_thioredoxin_reductase_1215371..1215521_POSITIVE 363 308 265 67 20 NC_002950:PG1945|3end_hypothetical_protein_2032220..2032370_POSITIVE 359 340 291 54 1 NC_002950:PG0768|3end_hypothetical_protein_821275..821425_NEGATIVE 356 314 272 62 9 NC_002950:PG1015|3end_hypothetical_protein_1075877..1076027_NEGATIVE 350 336 293 145 101 NC_002950:PG1388|3end_hypothetical_protein_1470095..1470245_NEGATIVE 331 424 381 71 29 NC_002950:PG0518|3end_abortive_infection_protein_family_562214..562364_NEGATIVE 328 395 356 150 107 NC_002950:PG0170|3end_methionyl-tRNA_synthetase_191774..191924_POSITIVE 327 546 510 44 2 NC_002950:PG2161|3end_transcriptional_regulator,_AraC_family_2266717..2266867_NEGATIVE 327 450 403 150 94 NC_002950:PG2037|3end_hypothetical_protein_2137591..2137741_NEGATIVE 325 309 261 73 32 NC_002950:PG0425|3end_esterase,_putative_463219..463369_NEGATIVE 323 98 53 50 5 NC_002950:PG1360|3end_phosphoribosylamine--glycine_ligase_1438618..1438768_NEGATIVE 319 438 395 87 35 NC_002950:PG1600|3end_hypothetical_protein_1679959..1680109_NEGATIVE 319 308 261 84 36 NC_002950:PG1012|3end_tRNA-i(6)A37_modification_enzyme_MiaB_1070089..1070239_NEGATIVE 317 407 363 63 17 NC_002950:PG0777|3end_electron_transfer_flavoprotein,_beta_subunit_830193..830343_NEGATIVE 313 400 352 82 27 NC_002950:PG1391|3end_hypothetical_protein_1472961..1473111_POSITIVE 313 539 511 98 70 NC_002950:PG1196|3end_hypothetical_protein_1275359..1275509_POSITIVE 311 229 182 93 34 NC_002950:PG1578|3end_quinolinate_synthetase_1656472..1656622_POSITIVE 311 320 277 151 98 NC_002950:PG1462|3end_hypothetical_protein_1541167..1541317_POSITIVE