Origin IGS: tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgctatcttttggagaaacgaatcgatgtcttccgcagaatctgccatatcatgcaacgcgaaggcctcttgggcagctcggttgagcccgtgaggaaggcgtccgttcttccgcataaagagggccggacgccccacgatctgatattccacggtgaaagcactgcaatcatgtacgagagccgaagagcgacaaaagagatcgacataagctccttcggccaattcggcatgaggcatatctgcccattcccggtagtactgatctgttcgttcgcgtccccacgattccggagcatagagtttggtcttgagtatcggatgtggtttgaaagcaaagcgcaatcggccttcgtacttccgtgccagtcggaggaaggtatccgcataatcgagaaaattggacaggctatatccccaaggctctatcgaatggtgcggagcgatgattacgaggggtagctcctcattatttttttccgttcgactcctcatttcggaggagaaagcatcgaacaaaggtgctccgctgaccactccgttgcatcccctcacgcgagagagtcgcgagtagatgcgaaggtcttcttccgaaaccaaaaagtagtaccccagaagattgtgaaacaggaggtcgtaccagtcaggatattcttcgaggggatagccatagaggctgtagcaggtgagtatatcgggaaaggtcctctggcgaaggggcggaggcaactggatgtcgtaaggtgtggtatagaaaatgtaatccggtgcaaattcagcccgaatgtctctcacctctccattgtcccgacaagccggttgcggatcgaagcctttggcctgaaagtgagcaagcgtcttttgcaggagttcgccccgttcgccggccggcagattgtccgcaggacaaacgatgagtacaggccgaacacgcggatgccggagcatggcagcaaacagggcatcgtatttccacatggaatcgtacacggcaaggaatacgacattgatggtttccttgccgcatagtttcttttttagctcatcgttgcgctgctgtgcttcgcaaatgagccgaggctctaccgttaggcggcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc .........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9.........1.........2.........3.........4.........5.........6.........7.........8.........9 gcctactacgtcgattctcttctcgcctttatgccctcgctcccaaacggatgcagtatatcatcacagagggaaaacgacgcctgcgccgcctaacggtagagcctcggctcatttgcgaagcacagcagcgcaacgatgagctaaaaaagaaactatgcggcaaggaaaccatcaatgtcgtattccttgccgtgtacgattccatgtggaaatacgatgccctgtttgctgccatgctccggcatccgcgtgttcggcctgtactcatcgtttgtcctgcggacaatctgccggccggcgaacggggcgaactcctgcaaaagacgcttgctcactttcaggccaaaggcttcgatccgcaaccggcttgtcgggacaatggagaggtgagagacattcgggctgaatttgcaccggattacattttctataccacaccttacgacatccagttgcctccgccccttcgccagaggacctttcccgatatactcacctgctacagcctctatggctatcccctcgaagaatatcctgactggtacgacctcctgtttcacaatcttctggggtactactttttggtttcggaagaagaccttcgcatctactcgcgactctctcgcgtgaggggatgcaacggagtggtcagcggagcacctttgttcgatgctttctcctccgaaatgaggagtcgaacggaaaaaaataatgaggagctacccctcgtaatcatcgctccgcaccattcgatagagccttggggatatagcctgtccaattttctcgattatgcggataccttcctccgactggcacggaagtacgaaggccgattgcgctttgctttcaaaccacatccgatactcaagaccaaactctatgctccggaatcgtggggacgcgaacgaacagatcagtactaccgggaatgggcagatatgcctcatgccgaattggccgaaggagcttatgtcgatctcttttgtcgctcttcggctctcgtacatgattgcagtgctttcaccgtggaatatcagatcgtggggcgtccggccctctttatgcggaagaacggacgccttcctcacgggctcaaccgagctgcccaagaggccttcgcgttgcatgatatggcagattctgcggaagacatcgattcgtttctccaaaagatagcagagcgcagacccgatccagtagccgataggcgtcgggtcttcatccggga Mask Tandem Repeat Region ================================================ tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgctatcttttggagaaacgaatcgatgtcttccgcagaatctgccatatcatgcaacgcgaaggcctcttgggcagctcggttgagcccgtgaggaaggcgtccgttcttccgcataaagagggccggacgccccacgatctgatattccacggtgaaagcactgcaatcatgtacgagagccgaagagcgacaaaagagatcgacataagctccttcggccaattcggcatgaggcatatctgcccattcccggtagtactgatctgttcgttcgcgtccccacgattccggagcatagagtttggtcttgagtatcggatgtggtttgaaagcaaagcgcaatcggccttcgtacttccgtgccagtcggaggaaggtatccgcataatcgagaaaattggacaggctatatccccaaggctctatcgaatggtgcggagcgatgattacgaggggtagctcctcattatttttttccgttcgactcctcatttcggaggagaaagcatcgaacaaaggtgctccgctgaccactccgttgcatcccctcacgcgagagagtcgcgagtagatgcgaaggtcttcttccgaaaccaaaaagtagtaccccagaagattgtgaaacaggaggtcgtaccagtcaggatattcttcgaggggatagccatagaggctgtagcaggtgagtatatcgggaaaggtcctctggcgaaggggcggaggcaactggatgtcgtaaggtgtggtatagaaaatgtaatccggtgcaaattcagcccgaatgtctctcacctctccattgtcccgacaagccggttgcggatcgaagcctttggcctgaaagtgagcaagcgtcttttgcaggagttcgccccgttcgccggccggcagattgtccgcaggacaaacgatgagtacaggccgaacacgcggatgccggagcatggcagcaaacagggcatcgtatttccacatggaatcgtacacggcaaggaatacgacattgatggtttccttgccgcatagtttcttttttagctcatcgttgcgctgctgtgcttcgcaaatgagccgaggctctaccgttaggcggcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Find is-nt database================================================ Query_seq: PG0132:PG0133|PG0132:PG0133:hypothetical protein:hypothetical protein:-><-:153115..154348 1234 tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgctatcttttggagaaacgaatcgatgtcttccgcagaatctgccatatcatgcaacgcgaaggcctcttgggcagctcggttgagcccgtgaggaaggcgtccgttcttccgcataaagagggccggacgccccacgatctgatattccacggtgaaagcactgcaatcatgtacgagagccgaagagcgacaaaagagatcgacataagctccttcggccaattcggcatgaggcatatctgcccattcccggtagtactgatctgttcgttcgcgtccccacgattccggagcatagagtttggtcttgagtatcggatgtggtttgaaagcaaagcgcaatcggccttcgtacttccgtgccagtcggaggaaggtatccgcataatcgagaaaattggacaggctatatccccaaggctctatcgaatggtgcggagcgatgattacgaggggtagctcctcattatttttttccgttcgactcctcatttcggaggagaaagcatcgaacaaaggtgctccgctgaccactccgttgcatcccctcacgcgagagagtcgcgagtagatgcgaaggtcttcttccgaaaccaaaaagtagtaccccagaagattgtgaaacaggaggtcgtaccagtcaggatattcttcgaggggatagccatagaggctgtagcaggtgagtatatcgggaaaggtcctctggcgaaggggcggaggcaactggatgtcgtaaggtgtggtatagaaaatgtaatccggtgcaaattcagcccgaatgtctctcacctctccattgtcccgacaagccggttgcggatcgaagcctttggcctgaaagtgagcaagcgtcttttgcaggagttcgccccgttcgccggccggcagattgtccgcaggacaaacgatgagtacaggccgaacacgcggatgccggagcatggcagcaaacagggcatcgtatttccacatggaatcgtacacggcaaggaatacgacattgatggtttccttgccgcatagtttcttttttagctcatcgttgcgctgctgtgcttcgcaaatgagccgaggctctaccgttaggcggcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find is-aa database================================================ Query_seq: PG0132:PG0133|PG0132:PG0133:hypothetical protein:hypothetical protein:-><-:153115..154348 1234 tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgctatcttttggagaaacgaatcgatgtcttccgcagaatctgccatatcatgcaacgcgaaggcctcttgggcagctcggttgagcccgtgaggaaggcgtccgttcttccgcataaagagggccggacgccccacgatctgatattccacggtgaaagcactgcaatcatgtacgagagccgaagagcgacaaaagagatcgacataagctccttcggccaattcggcatgaggcatatctgcccattcccggtagtactgatctgttcgttcgcgtccccacgattccggagcatagagtttggtcttgagtatcggatgtggtttgaaagcaaagcgcaatcggccttcgtacttccgtgccagtcggaggaaggtatccgcataatcgagaaaattggacaggctatatccccaaggctctatcgaatggtgcggagcgatgattacgaggggtagctcctcattatttttttccgttcgactcctcatttcggaggagaaagcatcgaacaaaggtgctccgctgaccactccgttgcatcccctcacgcgagagagtcgcgagtagatgcgaaggtcttcttccgaaaccaaaaagtagtaccccagaagattgtgaaacaggaggtcgtaccagtcaggatattcttcgaggggatagccatagaggctgtagcaggtgagtatatcgggaaaggtcctctggcgaaggggcggaggcaactggatgtcgtaaggtgtggtatagaaaatgtaatccggtgcaaattcagcccgaatgtctctcacctctccattgtcccgacaagccggttgcggatcgaagcctttggcctgaaagtgagcaagcgtcttttgcaggagttcgccccgttcgccggccggcagattgtccgcaggacaaacgatgagtacaggccgaacacgcggatgccggagcatggcagcaaacagggcatcgtatttccacatggaatcgtacacggcaaggaatacgacattgatggtttccttgccgcatagtttcttttttagctcatcgttgcgctgctgtgcttcgcaaatgagccgaggctctaccgttaggcggcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 0 Find nr database================================================ Query_seq: PG0132:PG0133|PG0132:PG0133:hypothetical protein:hypothetical protein:-><-:153115..154348 1234 tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgctatcttttggagaaacgaatcgatgtcttccgcagaatctgccatatcatgcaacgcgaaggcctcttgggcagctcggttgagcccgtgaggaaggcgtccgttcttccgcataaagagggccggacgccccacgatctgatattccacggtgaaagcactgcaatcatgtacgagagccgaagagcgacaaaagagatcgacataagctccttcggccaattcggcatgaggcatatctgcccattcccggtagtactgatctgttcgttcgcgtccccacgattccggagcatagagtttggtcttgagtatcggatgtggtttgaaagcaaagcgcaatcggccttcgtacttccgtgccagtcggaggaaggtatccgcataatcgagaaaattggacaggctatatccccaaggctctatcgaatggtgcggagcgatgattacgaggggtagctcctcattatttttttccgttcgactcctcatttcggaggagaaagcatcgaacaaaggtgctccgctgaccactccgttgcatcccctcacgcgagagagtcgcgagtagatgcgaaggtcttcttccgaaaccaaaaagtagtaccccagaagattgtgaaacaggaggtcgtaccagtcaggatattcttcgaggggatagccatagaggctgtagcaggtgagtatatcgggaaaggtcctctggcgaaggggcggaggcaactggatgtcgtaaggtgtggtatagaaaatgtaatccggtgcaaattcagcccgaatgtctctcacctctccattgtcccgacaagccggttgcggatcgaagcctttggcctgaaagtgagcaagcgtcttttgcaggagttcgccccgttcgccggccggcagattgtccgcaggacaaacgatgagtacaggccgaacacgcggatgccggagcatggcagcaaacagggcatcgtatttccacatggaatcgtacacggcaaggaatacgacattgatggtttccttgccgcatagtttcttttttagctcatcgttgcgctgctgtgcttcgcaaatgagccgaggctctaccgttaggcggcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Intra-Species Hit: Count: 0 Inter-species Hit: Count: 7 Min: 54 Max: 1145 Len: 1092 Subject: UniRef90_Q1XT45 Cluster: Hypothetical protein; n=1; Flavobacterium johnsoniae UW101|Rep: Hypothetical protein - Flavobacterium johnsoniae UW101 HSP 1 e-value: 4.0E-59 bit: 231.0 Len: 1068 Query Start:54 Query End:1121 Subject Strand: null Subject Start: 38 Subject End: 396 ..................................................... I C E A Q Q R N D E L K K K L C G K E T I N V V F L A V Y D S M W K Y D A L F A A M L R H P R V R P V L I V C P A D N L P A G E R G E L L Q K T L A H F Q A K G F D P Q P A C R D - N G E V R D I R A E F A P D Y I F Y T T P Y D I Q L P P P L R Q R T F P D I L T C Y S L Y G Y P L E E Y P D W Y D L L F H N L L G Y Y F L V S E E D L R I Y S R L S R V R G C N G V V S G A P L F D A F S S E M R S R T - - - E K N N E E L P L V I I A P H H S I E P W G Y S L S N F L D Y A D T F L R L A R K Y E G R L R F A F K P H P I L K T K L Y A P E S W G R E R T D Q Y Y R E W A D M P H A E L A E G A Y V D L F C R S S A L V H D C S A F T V E Y Q I V G R P A L F M R K N G R L P H G L N R A A Q E A F A L H D M A D S A E D I D S F L Q K I ................................................................................................................. ..................................................... I K Q A P K K H Q K A L E I V R K K E K I K V A F F L I H E S V W K Y D V L F D L M V Q H P K F E P A L F V C P V V N F G H E N M L F E M N K S F E A F K K K G Y D V I K T Y D D V T G E Y L D I K N T F S P D I I F F T N P Y E G L V D D R Y Y I K E F S N T L T C Y V P Y A I M T T N Y E T F Y N S K F H N L V W R I F S E T P I H K N I A S Q K Q K N K G I N N V V T G Y P G F D Q L L I N K K P N N G V W K N Q N V A L K K I I W A P H H S M H E L N - K V S N F L E Y F D V F L E L A A V Y K E Q L Q I A F K P H P L L R I K L E N D P N W G K E K T D A Y Y A E W T N L E N G Q F E N A D Y G D L F L T S D A L I H D C G S F M A E Y L I T G K P A L F M I R T E D V M K E W S E F G E K A V E A H Y Q S R T K E E L I D F I E N V ................................................................................................................. Subject: UniRef90_Q8A3S5 Cluster: Hypothetical protein; n=1; Bacteroides thetaiotaomicron|Rep: Hypothetical protein - Bacteroides thetaiotaomicron HSP 1 e-value: 5.0E-43 bit: 177.0 Len: 1026 Query Start:60 Query End:1085 Subject Strand: null Subject Start: 29 Subject End: 370 ........................................................... K K L C G K E T I N V V F L A V Y D S M W K Y D A L F A A M L R H P R V R P V L I V C P A D N L P A G E R G E L L Q K T L A H F Q A K G F D P Q P A C R - - - D N G E V R D I R A E F A P D Y I F Y T T P Y D I Q L P P P L R Q R T F P D I L T C Y S L Y G Y P L E E Y P D W Y - D L L F H N L L G Y Y F L V S E E - D L R I Y S R L S R V R G C N G V V S G A P L F D A F S S E M R S - R T E K N N E E L P L V I I A P H H S I E P W G - Y S L S N F L D Y A D T F L R L A R K Y E G R L R F A F K P H P I L K T K L Y A P E S W G R E R T D Q Y Y R E W A D M P H A E L A E G A Y V D L F C R S S A L V H D C S A F T V E Y Q I V G R P A L F M R K N G R L P H G L N R A A Q E A F A L H D M A D S A E D I D S F L Q ..................................................................................................................................................... ........................................................... K R L R R K K N I R V L F A V A E S A T W K S D C L Y K A M A E H P R F T P S I L V L P D E Q K E K T L L K E E V D S C F N L F C R K G Y - - - - A C T Y P Y Q N G K L I N I R K K L K P D I I F Y Q K P Y T F Y - P K S L L Y Y K N M N A L F C Y T N Y A F H - S L L T D W A N D N E F F R L M W Q N Y Y E N E S A N V D L K K K F A G I F S - N I V V T G L P V T D L F L T E K H E D K W K K T D K S R K R I I W A P H F S I S D G G C L N Y S T F L S I A E E L L E F I K N T Q L P V Q M A F K P H P L L K S Q L Y N Y S S W G K E K T D E Y Y A A W E F L P N A Q L E T N E Y V D L F M T S D A M I H D C G S F T I E Y H H T L K P V M Y L V N G K E H T A T M N S F A K A A Y D L H Y K G Q T I Q D I R N F I E ..................................................................................................................................................... Subject: UniRef90_Q1V7N2 Cluster: Hypothetical protein; n=1; Vibrio alginolyticus 12G01|Rep: Hypothetical protein - Vibrio alginolyticus 12G01 HSP 1 e-value: 5.0E-43 bit: 177.0 Len: 1083 Query Start:63 Query End:1145 Subject Strand: null Subject Start: 11 Subject End: 373 .............................................................. R L T V E P R L I C E A Q Q R N D E L K K K L C G K E T I N V V F L A V Y D S M W K Y D A L F A A M L R H P R V R P V L I V C P A D N L P A G E R G E L L Q K T L A H F Q A K G F D P Q P A C R D N G E V R D I R A E F A P D Y I F Y T T P Y D I Q L P P P L R Q R T F P D I L T C Y S L Y G Y P L E E Y P D W - - - Y D L L F H N L L G Y Y F L V S E E D L R I Y S R L S R V R G C N G V V S G A P L F D A F S S E - - - M R S R T E K N N E E L P L V I I A P H H S I E P W G Y S L S N F L D Y A D T F L R L A R K Y E G R L R F A F K P H P I L K T K L Y A P E S W G R E R T D Q Y Y R E W A D M P H A E L A E G A Y V D L F C R S S A L V H D C S A F T V E Y Q I V G R P A L F M R K N G R L P H G L N R A A Q E A F A L H D M A D S A E D I D S F L ......................................................................................... .............................................................. R Q T V K Y Q L N I L A D E R R - - - L K K L K K K N K I R V A F F V L H H S V W K C D A V F R A M M E D D F F E P F I F V C P Y T G K D D V S C I Q D V Q K N V N F F Q N K G Y P T V S S Y N K N K S T W I D I D T L D I D I I F F T N P H K I T - K K D Y Y S K A Y S K Y L S I Y I P Y S H Q I S K Y N N Y K E Q Y N Q Q F H N M M W K I F A P H F D E V D I F K K N S D L K G R N I L V T G Y P A T E P L I N N E L V A N S P W K K Q D S N K L R V I F A P H H T I D T P E L P Y S T F L S F S Q Q I Q S L S E K Y K K N I Q W A F K P H P M L K E K L Y K H K D W G K E K T D T Y Y R F W E Q S S F S Q L E E G D Y Y D L F K T S D A M I H D S G S F L A E Y L Y L N K P V M Y L A L S D D I R N Y Q N P F G N K A Y D S C T K G K S Y S D I E N F L ......................................................................................... Subject: UniRef90_A0WXR8 Cluster: CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase; n=1; Shewanella pealeana ATCC 700345|Rep: CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase - Shewanella pealeana ATCC 700345 HSP 1 e-value: 5.0E-39 bit: 164.0 Len: 1008 Query Start:54 Query End:1061 Subject Strand: null Subject Start: 59 Subject End: 391 ..................................................... I N V V F L A V Y D S M W K Y D A L F A A M L R H P R V R P V L I V C P A D N L - - P A G E R G E L L Q K T L A H F Q A K G F D P Q P A C R D N G E V R D I R A E F A P D Y I F Y T T P Y D I Q L P P P L R Q R T F P D I L T C Y S L Y G Y P L E - E Y P D W Y D L L F H N L L G Y Y F L V S E E D L R I Y S R L S R V R G C N - - - - G V V S G A P L F D A F S S E M R S R T E K N N E E L P L V I I A P H H S I E P W G Y S L S N - - F L D Y A D T F L R L A R K Y E G R L R F A F K P H P I L K T K L Y A P E S W G R E R T D Q Y Y R E W A D M P H A E L A E G A Y V D L F C R S S A L V H D C S A F T V E Y Q I V G R P A L F M R K N G R L P H G L N R A A Q E A F A L H D M A D S A E D I D S F L Q K I ............................................................................................................................................................................. ..................................................... I N V V F L V L Y R S I W K V D L V F K E M M K D E R Y N P C I V V I P R T N T V D P L S E A K E - - - - T Y E Y F K S K G Y K T K L A Y Q D - G K W Q D L E L V N K I D L V F F S I P Y K N T E D K Y L I N S L Y R K V C - C Y V P Y F E Q I D K D Y D V H F N G L T E N L C W K I F Q I N K I H K D I A A K F S Y N K G M N I D V V G Y T A T E P L Y N D S I V E S N P W K C K N - - - L K K I I I A P H H S I D K - N T D L S N A T F L E T Y K T L Q L L P K L Y E N Y A C F A F K P H P L L K E K L Y E H P E W G I E R T N K Y W K F W E E Q H N T Q I E N A G Y I D L F K S S D A M I H D C S S F I I E Y L Y V N K P C L Y L N P N V R - - N Q L N A Y G V I G F D A I T K S Y C N N D I I D F V E K V ............................................................................................................................................................................. Subject: UniRef90_Q7VK13 Cluster: Hypothetical protein; n=1; Helicobacter hepaticus|Rep: Hypothetical protein - Helicobacter hepaticus HSP 1 e-value: 2.0E-15 bit: 86.7 Len: 897 Query Start:165 Query End:1061 Subject Strand: null Subject Start: 96 Subject End: 407 .................................................................................................................................................................... I N V V F L A V Y D S M W K Y D A L F A A M L R H P R V R P V L I V C P A D N L P A G E R G E L L Q K T L A H F Q A K G F D P Q P A C R D N G E V R D I R A E F A P - - - - - D Y I F Y T T P Y D I Q L P P P L R Q R T F P D I - L T C Y S L Y G Y P - - L E E Y P D W Y D L L F H N L L G Y Y F L V S E E D L R I Y S R L S R V R G C N G V V S G A P L F D A F S S E M R S R T E K N N E E L P L V I I A P H H S I - - E P W G Y S L S N F L D Y A D T F L R L A R K Y E G R L R F A F K P H P I L K T - - - - - K L Y A P E S W G R E R - T D Q Y Y R E W A D M P H A E L A E G A - Y V D L F C R S S A L V H D C S A F T V E Y Q I V G R P A L F M ............................................................................................................................................................................. .................................................................................................................................................................... V R V G F L I I S D C V F S A R A I F E Q M L K D C T F E P F V L V I P - - D T S R G E E R M F R E M T K T Y K S L C E S Y P E Y K D K I L H S Y D E T K K D F I D F S S T L D I A Y F D N P Y D S M V Y K F Y T I F Y L S Q F A L S I Y M P Y G Y T G Y L N Y T L G V Y A T L E Y S L L W N I Y V E N Q N N C E L I K T H Q I A K V K N L K L I G Y P K L D S L A K F L - A Q G Q E S N K E R K Q I I I A P H H T L T L E D F P L Y L S N F M R L S E F F L K L P K L Y P - Q I D F I F R P H P L L F T H L I R F K I Y E R G G G N S E L F V E N Y L Q Q I A Q I P N M I Y Q E G G D Y F E S F A T S S A L I H D C A G F M A E W L Y T D K P E A F I ............................................................................................................................................................................. Subject: UniRef90_Q5NQM8 Cluster: Hypothetical protein; n=1; Zymomonas mobilis|Rep: Hypothetical protein - Zymomonas mobilis HSP 1 e-value: 9.0E-11 bit: 70.9 Len: 1005 Query Start:57 Query End:1061 Subject Strand: null Subject Start: 157 Subject End: 506 ........................................................ I N V V F L - - - - A V Y D S M W K Y D A L F A A M L R H P R V R P V L I V C P A D N L P A G E R G E - - - - - - - - L L Q K T L A H F Q A K G F D P Q P A C R D N G E V R D I R A E F A P D Y I F Y T T P Y D I Q L P P P L R Q R T F P D I L T C Y - S L Y G Y P L - - - - - - - E E Y P D W Y - D L L F H N L L G Y Y F L V S E E D L R I Y S R L S R V R G C N G V V S G A P L F D A F S S E M R S R T E K N N E E L P L - - - - - - - - - V I I A P H H S I E P W G Y S L S N F L D Y A D T F L R L A R K Y E G R - - L R F A F K P H P I L K T K L Y A P E S W G R E R T D Q Y Y R E W A D M P H A E L A E G A - Y V D L F C R S S A L V H D C S A F T V E Y Q I V - G R P A L F M R K N G R L P H G L N R A A Q E - - - - A F A L H D M A D S A E D I D S F L Q K ............................................................................................................................................................................. ........................................................ I K V L F L I H N M A L W D S L R D V Y A L M A A R D N Y E - - - - V I V A T S P R Y F P A T Q D Y Q A E D E V H Q G L E Q Q S I P H I R F K D - - - - - - - - D F E S A L Q V I K A I A P D V I F R Q M P W E V N T P E P F Q T Q H L N F A R L C Y V P Y Y G L N I L E K L T A E E N E Q D F S A D Q Y F H R M C W R M Y C E N E P L Y Q R M K E K S L R G G D N I V V S G H P K L D - - - - - - R L W E S R K N P E W P I K S E G E K K F R L I W A P H H T I - - - G N G W L D F G I F P Q T F G D M L Q W A E D A Q D I E F V L R P H P L L F N S L L F Y K L F N E Q Q V E Q F K K L W N R L P N T A L S E G G D Y G S L L A A S D G M I T E G V S F L A E Y Q I F H D K P L I F L - - D S Q R H R G F N A V G E K I M R G T Y N A T T I Q A A R E I V D S Y R Q K ............................................................................................................................................................................. Subject: UniRef90_A3VHI9 Cluster: Hypothetical protein; n=1; Rhodobacterales bacterium HTCC2654|Rep: Hypothetical protein - Rhodobacterales bacterium HTCC2654 HSP 1 e-value: 1.0E-9 bit: 67.0 Len: 360 Query Start:144 Query End:503 Subject Strand: null Subject Start: 303 Subject End: 422 ............................................................................................................................................... V I I A P H H S I E P W G Y S L S N F L D Y A D T F L R L A R K Y E G R L R F A F K P H P I L K T K L Y A P E S W G R E R T D Q Y Y R E W A D M P H A - E L A E G A Y V D L F C R S S A L V H D C S A F T V E Y Q I V G R P A L F M R K N G R L P ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... ............................................................................................................................................... V I W S A H H A I D G C W N G F G T F P E V C D E M L A L A R R R P D - L D I L F S P H P A L I T R I D G M T P A R R A R F D A F F R T W D A L P N T G Q L R S G Q Y L G P F A A S D L L V V D G L S F L M E Y Q L L K K P V I Y L S R P G S S P ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Predict ORF larger than 30AA ================================================ Protein_Len: 34 Strand: + Start: 32 End: 133 ............................... M D R V C A L L S F G E T N R C L P Q N L P Y H A T R R P L G Q L G ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 45 Strand: + Start: 7 End: 141 ...... M K T R R L S A T G S G L R S A I F W R N E S M S S A E S A I S C N A K A S W A A R L S P ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 34 Strand: + Start: 395 End: 496 .......................................................................................................................................................................................................................................................................................................................................................................................................... M G L R T S V P V G G R Y P H N R E N W T G Y I P K A L S N G A E R .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 24 End: 509 ....................... M G Y W I G S A L C Y L L E K R I D V F R R I C H I M Q R E G L L G S S V E P V R K A S V L P H K E G R T P H D L I F H ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: + Start: 451 End: 621 .................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M D R L Y P Q G S I E W C G A M I T R G S S S L F F S V R L L I S E E K A S N K G A P L T T P L H P L T R E S R E ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 47 Strand: + Start: 596 End: 736 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M P S R E R V A S R C E G L L P K P K S S T P E D C E T G G R T S Q D I L R G D S H R G C S R .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 57 Strand: + Start: 794 End: 964 ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M W Y R K C N P V Q I Q P E C L S P L H C P D K P V A D R S L W P E S E Q A S F A G V R P V R R P A D C P Q D K R .............................................................................................................................................................................................................................................................................. Protein_Len: 60 Strand: + Start: 519 End: 1076 ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... M I F F R S T P H F G G E S I E Q R C S A D H S V A S P H A R E S R V D A K V F F R N Q K V V P Q K I V K Q E V V P V R .............................................................................................................................................................. Protein_Len: 60 Strand: + Start: 946 End: 1203 ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. M S A G Q T M S T G R T R G C R S M A A N R A S Y F H M E S Y T A R N T T L M V S L P H S F F F S S S L R C C A S Q M S ............................... Protein_Len: 42 Strand: - Start: 1096 End: 1221 ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... R Q A A T S R L H A S A R G N P P A P T T K G R H H Y V A D T Q S R P C L P S F L M ............. Protein_Len: 60 Strand: - Start: 845 End: 1057 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ S A K P R F T L L R R K C S N A G N A P R C I T R L V F S S Y L G F V R I G S C P L L C P M T N G C P I T C P L S Y S M ................................................................................................................................................................................. Protein_Len: 60 Strand: - Start: 829 End: 1077 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ S C A D K A P T R G T R R G A S Q G C S L R H T C A S C A S A P A H C C V P C R I E V H F R V R C P I R C Q H N G Q R M ............................................................................................................................................................. Protein_Len: 43 Strand: - Start: 697 End: 825 ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ S I R R P S L W L P Q L L H T Y R S L D E P S P A S A V P H R L T H Y L F H L G T C M ......................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 605 End: 829 ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ F T T G W F I T F C S T T G T L I N K S P I A M S A T A P S Y I P F P G R A F P R L C S S T T L H P I S F T I R H L N M ..................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 57 Strand: - Start: 523 End: 693 .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... K K G N S E E N R L L F C R V F T S R Q G S R Q M G E R S L T A L L H S P R R G F G F L L V G S S Q S V P P R V M ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Protein_Len: 58 Strand: - Start: 223 End: 396 .............................................................................................................................................................................................................................. T R S G F L S L L S R C L S R R G I R C S A Y R G M G P L V S R N T R T G V I G S C L T Q D Q T D S T T Q F C L A M ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 39 Strand: - Start: 103 End: 219 ...................................................................................................... A V R L G R P C S P Q A R S S P T R E E A Y L P G S A G R D S I G R H F C Q M ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 56 End: 463 ....................................................... L C I Q G N G T T S I Q E N A D G R N R L M S N P R S Y R I H N S L L A C D A K T S G H W D S S P I R M I S F I P C A M ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... Protein_Len: 60 Strand: - Start: 3 End: 1184 .. F L A D Y K W M S D Y V A L F V V N I T E K G C L K K K L E D N R Q Q A E C I L R P E V T L R R L R R K G E T I I Y Q M .................................................. tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Predict Promoter with matrix: RpoD-15 score > 80================================================ Predict Promoter with matrix: RpoD-16 score > 80================================================ Predict Promoter with matrix: RpoD-17 score > 80================================================ Predict Promoter with matrix: RpoD-18 score > 80================================================ Predict Promoter with matrix: RpoD-19 score > 80================================================ Predict Promoter with matrix: RpoN score > 80================================================ tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Predict TransTerm conf > 70================================================ TransTerm Strand: - Conf: 38 HP_score: -2.1 Tail_Score: -2.56604 Start: 453 End: 467 Full_Region: tcgatagagccttgg ggata tagcc tgtcc aattttctcgattat ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ggatatagcctgtcc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 85 HP_score: -2.6 Tail_Score: -5.53288 Start: 500 End: 522 Full_Region: GGTGCGGAGCGATGA TTACGAGGGG TAG CTCCTCATTA TTTTTTTCCGTTCGA ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGAGGGGTAGCTCCTCATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ TransTerm Strand: + Conf: 77 HP_score: -4.3 Tail_Score: -4.83715 Start: 503 End: 519 Full_Region: GCGGAGCGATGATTA CGAGGGG TAG CTCCTCA TTATTTTTTTCCGTT ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGGGTAGCTCCTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 45 HP_score: -2.0 Tail_Score: -3.38812 Start: 589 End: 633 Full_Region: GCTCCGCTGACCACT CCGTTGCATCCCCTCACG CGAGAGAGT CGCGAGTAGATGCGAAGG TCTTCTTCCGAAACC ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTTGCATCCCCTCACGCGAGAGAGTCGCGAGTAGATGCGAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... TransTerm Strand: + Conf: 71 HP_score: -5.9 Tail_Score: -4.26589 Start: 1144 End: 1157 Full_Region: GGCTCTACCGTTAGG CGGCG CAGG CGTCG TTTTCCCTCTGTGAT .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGCAGGCGTCG............................................................................. Find igs database================================================ Query_seq: PG0132:PG0133|PG0132:PG0133:hypothetical protein:hypothetical protein:-><-:153115..154348 1234 tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc Intra-Species Hit: Count: 1 Min: 1 Max: 1234 Len: 1234 Subject: NC_002950_PG0132_PG0133|hypothetical protein:hypothetical protein|POSITIVE:NEGATIVE|[153115,154348]|1234 HSP 1 e-value: 5.0E-42 bit: 174.0 Len: 88 Query Start:1147 Query End:1234 Subject Strand: POSITIVE Subject Start: 1147 Subject End: 1234 ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc ..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................cgcaggcgtcgttttccctctgtgatgatatactgcatccgtttgggagcgagggcataaaggcgagaagagaatcgacgtagtaggc HSP 2 e-value: 4.0E-21 bit: 105.0 Len: 53 Query Start:1 Query End:53 Subject Strand: POSITIVE Subject Start: 1 Subject End: 53 tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. tcccggatgaagacccgacgcctatcggctactggatcgggtctgcgctctgc............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. Inter-species Hit: Count: 0 Predict Forward Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ UCCCGGAUGAAGACCCGACGCCUAUCGGCUACUGGAUCGGGUCUGCGCUCUGCUAUCUUUUGGAGAAACGAAUCGAUGUCUUCCGCAGAAUCUGCCAUAUCAUGCAACGCGAAGGCCUCUUGGGCAGCUCGGUUGAGCCCGUGAGGAAGGCGUCCGUUCUUCCGCAUAAAGAGGGCCGGACGCCCCACGAUCUGAUAUUCCACGGUGAAAGCACUGCAAUCAUGUACGAGAGCCGAAGAGCGACAAAAGAGAUCGACAUAAGCUCCUUCGGCCAAUUCGGCAUGAGGCAUAUCUGCCCAUUCCCGGUAGUACUGAUCUGUUCGUUCGCGUCCCCACGAUUCCGGAGCAUAGAGUUUGGUCUUGAGUAUCGGAUGUGGUUUGAAAGCAAAGCGCAAUCGGCCUUCGUACUUCCGUGCCAGUCGGAGGAAGGUAUCCGCAUAAUCGAGAAAAUUGGACAGGCUAUAUCCCCAAGGCUCUAUCGAAUGGUGCGGAGCGAUGAUUACGAGGGGUAGCUCCUCAUUAUUUUUUUCCGUUCGACUCCUCAUUUCGGAGGAGAAAGCAUCGAACAAAGGUGCUCCGCUGACCACUCCGUUGCAUCCCCUCACGCGAGAGAGUCGCGAGUAGAUGCGAAGGUCUUCUUCCGAAACCAAAAAGUAGUACCCCAGAAGAUUGUGAAACAGGAGGUCGUACCAGUCAGGAUAUUCUUCGAGGGGAUAGCCAUAGAGGCUGUAGCAGGUGAGUAUAUCGGGAAAGGUCCUCUGGCGAAGGGGCGGAGGCAACUGGAUGUCGUAAGGUGUGGUAUAGAAAAUGUAAUCCGGUGCAAAUUCAGCCCGAAUGUCUCUCACCUCUCCAUUGUCCCGACAAGCCGGUUGCGGAUCGAAGCCUUUGGCCUGAAAGUGAGCAAGCGUCUUUUGCAGGAGUUCGCCCCGUUCGCCGGCCGGCAGAUUGUCCGCAGGACAAACGAUGAGUACAGGCCGAACACGCGGAUGCCGGAGCAUGGCAGCAAACAGGGCAUCGUAUUUCCACAUGGAAUCGUACACGGCAAGGAAUACGACAUUGAUGGUUUCCUUGCCGCAUAGUUUCUUUUUUAGCUCAUCGUUGCGCUGCUGUGCUUCGCAAAUGAGCCGAGGCUCUACCGUUAGGCGGCGCAGGCGUCGUUUUCCCUCUGUGAUGAUAUACUGCAUCCGUUUGGGAGCGAGGGCAUAAAGGCGAGAAGAGAAUCGACGUAGUAGGC ..........((((((((((((....))).....).))))))))..((.(((((((..((((......))))(((((.((((((((......((((.......((...(((...((((..(((..(((((((((.(..(((((.((..((((((((..((((........))))..)))))))))).((..(((.(((((..((((....)).((((..((((((.((((.((((((((((.......(....).......))).)))))))...))))))))))((((.(((((((..(((((((((.((((.((((((((......((((((.(((.(((.((((.....(((..(((((((.(((((((((((.((((....)))).))))....((((((....(((((.......))))))))))).)))).))).))))))...)..))).((........))...))))....((.((((((((((((........((((((...)))))).............((((((((((((......))))))......)))))).....)))))))).((((..(((.(((((((..(((..((((.....)))))))..))))))).((((((((........................))))))))........)))))))..)))).)).)))......))).)))))).(((.....))).).))))))).))))))))))))).......((((((((((((((((.((((((((.(((((...((.((((.............((.(((.((.......))))).)).............))))...)))))))..))))))))................((((.(((...(....)..)))...))))..)))))))).))))))))..))))))))))).))))......))..))))))))..))....))))).(((.(((((((((((((.(((.((((...((((((((....))))..)))).((((((((((.((.(......).))))))))))))................))))...)))..))))))))))))))))..).)))))).)))...)))..))))..)))..)).((((..((((..((.((((........))))))...)))))))).)))).....))).)))))..))))).))))))))) (-459.77) Predict Reverse Strand Minimun Free Energy by RNAFold (ViennaRNA) ================================================ GCCUACUACGUCGAUUCUCUUCUCGCCUUUAUGCCCUCGCUCCCAAACGGAUGCAGUAUAUCAUCACAGAGGGAAAACGACGCCUGCGCCGCCUAACGGUAGAGCCUCGGCUCAUUUGCGAAGCACAGCAGCGCAACGAUGAGCUAAAAAAGAAACUAUGCGGCAAGGAAACCAUCAAUGUCGUAUUCCUUGCCGUGUACGAUUCCAUGUGGAAAUACGAUGCCCUGUUUGCUGCCAUGCUCCGGCAUCCGCGUGUUCGGCCUGUACUCAUCGUUUGUCCUGCGGACAAUCUGCCGGCCGGCGAACGGGGCGAACUCCUGCAAAAGACGCUUGCUCACUUUCAGGCCAAAGGCUUCGAUCCGCAACCGGCUUGUCGGGACAAUGGAGAGGUGAGAGACAUUCGGGCUGAAUUUGCACCGGAUUACAUUUUCUAUACCACACCUUACGACAUCCAGUUGCCUCCGCCCCUUCGCCAGAGGACCUUUCCCGAUAUACUCACCUGCUACAGCCUCUAUGGCUAUCCCCUCGAAGAAUAUCCUGACUGGUACGACCUCCUGUUUCACAAUCUUCUGGGGUACUACUUUUUGGUUUCGGAAGAAGACCUUCGCAUCUACUCGCGACUCUCUCGCGUGAGGGGAUGCAACGGAGUGGUCAGCGGAGCACCUUUGUUCGAUGCUUUCUCCUCCGAAAUGAGGAGUCGAACGGAAAAAAAUAAUGAGGAGCUACCCCUCGUAAUCAUCGCUCCGCACCAUUCGAUAGAGCCUUGGGGAUAUAGCCUGUCCAAUUUUCUCGAUUAUGCGGAUACCUUCCUCCGACUGGCACGGAAGUACGAAGGCCGAUUGCGCUUUGCUUUCAAACCACAUCCGAUACUCAAGACCAAACUCUAUGCUCCGGAAUCGUGGGGACGCGAACGAACAGAUCAGUACUACCGGGAAUGGGCAGAUAUGCCUCAUGCCGAAUUGGCCGAAGGAGCUUAUGUCGAUCUCUUUUGUCGCUCUUCGGCUCUCGUACAUGAUUGCAGUGCUUUCACCGUGGAAUAUCAGAUCGUGGGGCGUCCGGCCCUCUUUAUGCGGAAGAACGGACGCCUUCCUCACGGGCUCAACCGAGCUGCCCAAGAGGCCUUCGCGUUGCAUGAUAUGGCAGAUUCUGCGGAAGACAUCGAUUCGUUUCUCCAAAAGAUAGCAGAGCGCAGACCCGAUCCAGUAGCCGAUAGGCGUCGGGUCUUCAUCCGGGA (((.....(((((.((..(((((......(((((....(((((.....))).)).))))).......)))))..)).)))))....(((.(((....))).((((....))))....))).((((..((((((.((((..(.((............((((((((((((((((.((....)).)).))))))))))))))...((((....)))).......))).))))))))))..))))..))).((((.(((.(((((((((((((.....((((((...))))))..((((((..((((((.((((((.......((((.......))))......(((((((...))))).))...(((((.((..(((((.......((.(.(((((((((.((((((((.......)).)))))).....))))).)))).).))...))))).)).)))))...)))))))))))).(((((......(((.((((.((....((....))......((((((((((..(((((.......(((.((........)).)))......)))))..((((.(((......((((((....).)))))...(((((..((((((.(......)))))))..)))))....(((((((..(((((((...(((((((((......((((((......)))))))))))))))........((((((.......)))))).......))))))))))))))..))).)))).)))))..)))))..............)).)))))))......)))))...))))))..).)))))..)))))))..((((((((((.((........((((.......(((......)))......))))....((((((.((((((((...(((((((((...(((..(((((((....)))).))).)))....((((((((.(((....(.(((......))).))))))))))))...)))).)))))...((.(((...(((..((((.(((.((((((.((((((((..(.(((......))).)..))))))))..((((..((((...........))))..))))...........)))))).)))...))))..)))))))).))).))))).))))))...)).)))))))))).((((((((......(((....)))))))))))..))).)))). (-445.36) Find mRNA Target Using Conserved IGS================================================ 5'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 531 619 571 62 3 NC_002950:PG0228|5end_DdaH_family_protein_264950..265180_NEGATIVE 515 157 114 64 14 NC_002950:PG0146|5end_hypothetical_protein_169115..169345_NEGATIVE 486 1018 975 217 179 NC_002950:PG1225|5end_ABC_transporter,_ATP-binding_protein_1301385..1301615_POSITIVE 476 1170 1121 144 84 NC_002950:PG1211|5end_hexapeptide_transferase_family_protein_1290801..1291031_POSITIVE 472 967 924 72 27 NC_002950:PG1992|5end_glucose-inhibited_division_protein_A_2081410..2081640_POSITIVE 469 940 891 224 164 NC_002950:PG0635|5end_ribosomal_protein_L11_methyltransferase_687773..688003_NEGATIVE 468 619 571 76 31 NC_002950:PG1172|5end_iron-sulfur_cluster_binding_protein,_putative_1251173..1251403_POSITIVE 462 890 848 213 166 NC_002950:PG2075|5end_hypothetical_protein_2176466..2176696_NEGATIVE 462 48 3 78 30 NC_002950:PG1270|5end_hypothetical_protein_1350207..1350437_NEGATIVE 460 1149 1101 202 148 NC_002950:PG1837|5end_hemagglutinin_protein_HagA_1930337..1930567_POSITIVE 459 940 905 223 171 NC_002950:PG1475|5end_conjugative_transposon_protein_TraN_1551835..1552065_NEGATIVE 459 953 911 58 11 NC_002950:PG0143|5end_hydrolase,_carbon-nitrogen_family_166625..166855_NEGATIVE 447 1158 1111 73 29 NC_002950:PG1678|5end_hypothetical_protein_1763862..1764092_NEGATIVE 446 942 901 76 31 NC_002950:PG2218|5end_potassium_uptake_protein_TrkA_2331580..2331810_POSITIVE 446 943 901 155 99 NC_002950:PG2087|5end_hypothetical_protein_2186990..2187220_POSITIVE 445 977 933 45 8 NC_002950:PG0147|5end_hypothetical_protein_169667..169897_NEGATIVE 442 943 904 208 164 NC_002950:PG1579|5end_ATPase,_MoxR_family_1656493..1656723_POSITIVE 436 1017 972 198 143 NC_002950:PG0934|5end_hypothetical_protein_994318..994548_NEGATIVE 435 948 904 155 102 NC_002950:PG1966|5end_hypothetical_protein_2056924..2057154_NEGATIVE 434 770 726 228 174 NC_002950:PG1291|5end_hypothetical_protein_1371178..1371408_NEGATIVE 3'END mRNA Target Prediction=================================== Score srna_start srna_end target_start tegart_end seq_id 515 157 114 51 1 NC_002950:PG0147|3end_hypothetical_protein_169128..169278_NEGATIVE 462 48 3 71 23 NC_002950:PG1271|3end_acetylornithine_aminotransferase,_putative_1350214..1350364_NEGATIVE 450 955 913 47 3 NC_002950:PG1752|3end_hypothetical_protein_1838698..1838848_POSITIVE 445 977 933 58 21 NC_002950:PG0148|3end_sigma-54-dependent_transcriptional_regulator_169654..169804_NEGATIVE 442 943 904 107 63 NC_002950:PG1578|3end_quinolinate_synthetase_1656472..1656622_POSITIVE 435 799 751 145 97 NC_002950:PG0932|3end_DNA_polymerase_III,_delta_prime_subunit,_putative_989833..989983_POSITIVE 433 799 759 46 1 NC_002950:PG0706|3end_hypothetical_protein_760882..761032_POSITIVE 428 1150 1101 72 10 NC_002950:PG0447|3end_hypothetical_protein_488176..488326_POSITIVE 427 959 914 55 2 NC_002950:PG2144|3end_hypothetical_protein_2253290..2253440_POSITIVE 427 957 914 100 56 NC_002950:PG0498|3end_S-ribosylhomocysteinase_538527..538677_POSITIVE 427 190 143 57 10 NC_002950:PG0142|3end_SpoOJ_regulator_protein_164755..164905_NEGATIVE 426 49 15 50 13 NC_002950:PG2213|3end_nitrite_reductase-related_protein_2324848..2324998_NEGATIVE 424 1169 1124 74 36 NC_002950:PG1055|3end_thiol_protease_1121202..1121352_NEGATIVE 423 146 103 151 100 NC_002950:PG1859|3end_glycerate_kinase_family_protein_1957174..1957324_NEGATIVE 423 959 913 148 81 NC_002950:PG1229|3end_hypothetical_protein_1305559..1305709_NEGATIVE 423 955 911 52 7 NC_002950:PG0715|3end_transporter_768676..768826_NEGATIVE 422 296 262 70 33 NC_002950:PG0691|3end_NifU-related_protein_747185..747335_NEGATIVE 420 1157 1111 148 107 NC_002950:PG0361|3end_hypothetical_protein_395481..395631_POSITIVE 420 1157 1115 65 1 NC_002950:PG0085|3end_alpha-galactosidase_100556..100706_POSITIVE 419 186 145 72 22 NC_002950:PG0143|3end_hydrolase,_carbon-nitrogen_family_165747..165897_NEGATIVE