Query sequence: gi|34541632|ref|NP_906111.1| Accession: [none] Description: hypothetical protein PG2046 [Porphyromonas gingivalis W83] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP_bind_3 PP-loop family 243.1 3.2e-72 1 tRNA_Me_trans tRNA methyl transferase 16.8 3.2e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- tRNA_Me_trans 1/1 24 87 .. 1 79 [. 16.8 3.2e-05 ATP_bind_3 1/1 25 225 .. 1 220 [] 243.1 3.2e-72 Alignments of top-scoring domains: tRNA_Me_trans: domain 1 of 1, from 24 to 87: score 16.8, E = 3.2e-05 *->mkVvVamSGGVDSSVaAyLLkeqGyeViGvfMknwdeelneDeeghk + V+Va+SGG DS + L+e Gye + ++ ++ + + gi|3454163 24 RLVLVALSGGADSVALLCVLRELGYETVAAHCNFHLR-----GVE-- 63 iNgkrgCcseeDlaDAqrVceqLGIPlyvvnf<-* s+eD+a ++r c+ L++Pl++++f gi|3454163 64 --------SDEDAAFVERLCRDLDVPLHRIDF 87 ATP_bind_3: domain 1 of 1, from 25 to 225: score 243.1, E = 3.2e-72 *->kiLvAvSGGlDSmaLLylLkklkpklapgiinkltaaHvdHglR.ee +LvA+SGG+DS+aLL +L++l g+ + +aaH++ +lR+ e gi|3454163 25 LVLVALSGGADSVALLCVLREL------GY--ETVAAHCNFHLRgVE 63 SdeeakfvkelCkklnipleiervdvdaiakksglnleeaAResfgvaRY Sde+a+fv++lC+ l +pl+ +d +a+++ ++e+aARe +RY gi|3454163 64 SDEDAAFVERLCRDLDVPLHRIDFDTVRYARERSISIEMAARE----LRY 109 dffekiakkngadvLltAHHlDDQaETfLmrLfRGsgllGLagikafvre ++f ++ k+ +++++ AHH+DD aET+ ++L RG+g+ GL+g+++ +r gi|3454163 110 EWFGQLRKELAIEYVAVAHHADDNAETMVLNLCRGTGISGLCGMPY-KR- 157 fnaggRgrivRPLLkvsKeeieeylkknkipwveDeSNadlkYtRNriRh + g ivRPLL+ +++eie+yl ki ++ D+SN+d ++ RN +Rh gi|3454163 158 --NDG---IVRPLLDATRDEIEAYLLDQKITYRTDSSNEDTRFRRNLVRH 202 ellPelkeenkpnfeqallrlael<-* +++P+lke n p +++allr +e gi|3454163 203 RIMPLLKELN-PSLQEALLRTREN 225