Query sequence: gi|34541630|ref|NP_906109.1|
Accession:      [none]
Description:    conserved hypothetical protein TIGR00486 [Porphyromonas gingivalis W83]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
NIF3     NIF3 (NGG1p interacting factor 3)              221.5    1.7e-63   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
NIF3       1/2      10   151 ..     1   145 [.   161.2  2.3e-45
NIF3       2/2     230   355 ..   116   245 .]    60.3  8.7e-17

Alignments of top-scoring domains:
NIF3: domain 1 of 2, from 10 to 151: score 161.2, E = 2.3e-45
                   *->LeefappslaedwDnnGLqvGdpdkevkkilvalDateavideAiek
                      +e+ +p +++e++Dn G qvGd  +e +  l+++D+teav++eAi +
  gi|3454163    10    IEAVCPRAYQESYDNSGVQVGDTKREATGALLCVDVTEAVLEEAIRL 56   

                   gaDliivHHPlifkplksititgpkgrrikkLikndInLYsaHTnlDaaP
                   g++l+i+HHP++fkplk++t + + +r ++ ++++++ LY+aHTn D a 
  gi|3454163    57 GCNLVIAHHPILFKPLKRLTGSSYVERCVELAVRHGLVLYAAHTNADNA- 105  

                   egGnNdqLAklLGleneeplgptkgagiGrvGelpelpmtleelaakl<-
                   ++G+N+ LA+++Gl n++pl+p +g  +  ++++++ ++ +++++++l  
  gi|3454163   106 PQGLNALLAERFGLLNTRPLEPLQGKLLE-LVTFVP-TEYADAVRQAL   151  

                   *
                    
  gi|3454163     -   -    

NIF3: domain 2 of 2, from 230 to 355: score 60.3, E = 8.7e-17
                   *->plgptkg.agiGrvGelpelpmtleelaaklkeklgleplrvgdngk
                      pl+++  +ag G vG+lp  p++  e + ++ke++gl++l  +++ +
  gi|3454163   230    PLANDHPsAGGGIVGDLPS-PISEREMLLHIKEVFGLKVLSHSAWRE 275  

                   ekIkrVAvcsGsGqskpefieeAaaegvDafITGeishhtahdArelGln
                   +  +r A+c+GsG++    + +Aa+eg+D+f+TGe ++ ++ dA e+ l 
  gi|3454163   276 RPLRRMAICGGSGAF---MWRRAAQEGADLFLTGEAKYNDFFDAGEH-LL 321  

                   vidaGHyaTErpglkaLaekLkekfgvevefidi<-*
                   ++ +GHy++E +  +  ++ +++kf+  ++  ++   
  gi|3454163   322 LVTIGHYESEEVANELFMRIISQKFPTFATHKSS    355