Query sequence: gi|34541058|ref|NP_905537.1| Accession: [none] Description: hypothetical protein PG1372 [Porphyromonas gingivalis W83] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PD40 WD40-like Beta Propeller Repeat 24.3 2.4e-07 1 TPR_2 Tetratricopeptide repeat 23.5 1.5e-05 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TPR_2 1/3 31 56 .. 9 34 .] 7.8 0.37 TPR_2 2/3 57 78 .. 1 22 [. 11.4 0.035 TPR_2 3/3 88 113 .. 1 26 [. 4.2 3.6 PD40 1/1 225 262 .. 1 41 [] 24.3 2.4e-07 Alignments of top-scoring domains: TPR_2: domain 1 of 3, from 31 to 56: score 7.8, E = 0.37 *->layyklgdyeeAleayekAleldPnn<-* ++++ g+y++Al ++ ++ +P++ gi|3454105 31 RLLIDSGRYDRALPIAQQLVAKNPKH 56 TPR_2: domain 2 of 3, from 57 to 78: score 11.4, E = 0.035 *->aealynlGlayyklgdyeeAle<-* a+ y+lGl++yk+++yeeA++ gi|3454105 57 ADNNYMLGLLLYKAERYEEAIA 78 TPR_2: domain 3 of 3, from 88 to 113: score 4.2, E = 3.6 *->aealynlGlayyklgdyeeAleayek<-* +a+ +l++ay+k + eAl+a+ek gi|3454105 88 SDAYEMLADAYAKEYFFSEALAALEK 113 PD40: domain 1 of 1, from 225 to 262: score 24.3, E = 2.4e-07 *->grltntsgeggPswSPDGktivFssnrgdgddgsGsfdiyv<-* ++l++ +e+ Ps+ +DG t+ F+s+r+d g G++d+y+ gi|3454105 225 EKLNSRFNENYPSLRADGFTLLFASDRPD---GIGGYDLYM 262