Query sequence: gi|34541048|ref|NP_905527.1|
Accession:      [none]
Description:    hypothetical protein PG1362 [Porphyromonas gingivalis W83]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
UPF0020  Putative RNA methylase family UPF0020          138.8    3.4e-41   1
THUMP    THUMP domain                                    44.3      2e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
THUMP      1/1      61   159 ..     1    97 []    44.3    2e-12
UPF0020    1/1     167   372 ..     1   222 []   138.8  3.4e-41

Alignments of top-scoring domains:
THUMP: domain 1 of 1, from 61 to 159: score 44.3, E = 2e-12
                   *->rvipveaecead.ledilklakeiikekffeegktFaVrtkrrgkei
                      r++ ++++  a++ ++i++  + ++++ ++   +tF + + +  +  
  gi|3454104    61    RILKPVITFHAKtTDEIYERLRLFDWTTVISSDQTFSIDSVVYSDSF 107  

                   knheftsrevnrevGkailertg.rlkVdLenPDivvhvEiikdkayisi
                   kn +++s + ++++++++ +r g+r++V L+nPDi++++++  +++ +s+
  gi|3454104   108 KNSQYISYRTKDALVDFFSDREGkRPSVRLSNPDILLNIHVSHEEVTLSL 157  

                   dr<-*
                   d+   
  gi|3454104   158 DS    159  

UPF0020: domain 1 of 1, from 167 to 372: score 138.8, E = 3.4e-41
                   *->RgyRpfngpapLkatLArAlvnLagwkpGdpllDPfCGsGTiLIEAA
                      RgyR+   +apL++ LA++++  agw+  + l+DP+CGsGT+LIEAA
  gi|3454104   167    RGYRVAETTAPLNEVLAAGILLKAGWDGSTDLIDPMCGSGTFLIEAA 213  

                   LmganvaPGlfR.rFgFekWekfdkdlWykl.lqeaeekanpnkaelkah
                   L++ n+aPG +R++F F+ W++fd dl  +l  +   e++ +        
  gi|3454104   214 LIACNIAPGIYRrGFAFQRWADFDLDLYDELfHDDSAERVFD------HI 257  

                   lyGsDiDrrmvrgAkiNaeaagvgdkiefvqadaaklpepllnglNvlsv
                   +yGsDi +  v  A+ N e+ag+g +i+ +++  ++ p+p+ ++      
  gi|3454104   258 IYGSDILPQAVAAARSNVERAGLGRYISLSVLPMQQRPKPESKA------ 301  

                   DvIvtdPPYGiRlgskgalekLYeefldelkrvlrggG.rlvfatsekkd
                      v +PPYG+R++  ++ ++LY  ++++lk +++g + ++ +  +e+++
  gi|3454104   302 -MLVMNPPYGERIK-VEDMQQLYTMIGERLKHNYAGCSaWILAFKPEHFN 349  

                   lekaieerGlelrkkkernvhlgllryi<-*
                       i++r   + + k++n+ l + ++    
  gi|3454104   350 ---HIGLR--QSHREKLMNGALECELRG    372