Query sequence: gi|34540907|ref|NP_905386.1|
Accession:      [none]
Description:    hypothetical protein PG1189 [Porphyromonas gingivalis W83]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
DUF349         Domain of Unknown Function (DUF349)       47.3    3.5e-12   3
BCAS2          Breast carcinoma amplified sequence 2      9.6      0.012   1
Integrin_alpha Integrin alpha cytoplasmic region          7.8      0.086   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
BCAS2            1/1     177   201 ..   218   242 .]     9.6    0.012
DUF349           1/3     272   353 ..     1    82 []    13.5   0.0054
DUF349           2/3     354   430 ..     1    82 []    20.0  9.1e-05
DUF349           3/3     431   508 ..     1    82 []    13.8   0.0042
Integrin_alpha   1/1     444   455 ..     4    15 .]     7.8    0.086

Alignments of top-scoring domains:
BCAS2: domain 1 of 1, from 177 to 201: score 9.6, E = 0.012
                   *->eqlkKeakerdWNLeankenvkpdy<-*
                      + ++K  ke ++ +ean ++++ +y   
  gi|3454090   177    HEIRKSWKETGPVPEANATDITKEY    201  

DUF349: domain 1 of 3, from 272 to 353: score 13.5, E = 0.0054
                   *->daLwkRvevirdafrsRReehrAeqtAelravadaKEALaaEAEeLA
                         w+R++++  a +    eh+  q  +   +  aK  L++E E   
  gi|3454090   272    EEVWARFKAASTAINKKYQEHFEKQKMREQENLAAKTLLCEEMEAI- 317  

                   as..LnPLeTdweaAsaelRkilddWkaigkvsReVd<-*
                   ++++Ln L+  w   + +   i ++Wk+ig + R      
  gi|3454090   318 DTsgLNSLA-KWDEQTKAVLEIQAKWKTIGYARRSDN    353  

DUF349: domain 2 of 3, from 354 to 430: score 20.0, E = 9.1e-05
                   *->daLwkRvevirdafrsRReehrAeqtAelravadaKEALaaEAEeLA
                        + +R+ ++ d  +    + +  +  el  +   K A  +EAE L 
  gi|3454090   354    EKIYERFRAACDDYFNKKTAFFKGKREELTDNYKKKLAMVEEAESLQ 400  

                   asLnPLeTdweaAsaelRkilddWkaigkvsReVd<-*
                   +s     +dw+ +s +l  +  +Wk+ig v  +     
  gi|3454090   401 ES-----SDWKETSTRLAELQKKWKTIGAVPHRYS    430  

DUF349: domain 3 of 3, from 431 to 508: score 13.8, E = 0.0042
                   *->daLwkRvevirdafrsRReehrAeqtAelravadaKEALaaEAEeLA
                      d +wkR+ ++ daf+ R  +       e   +  +K A  aE E L 
  gi|3454090   431    DEIWKRFTTACDAFFKRKKAEQGDMRSEECENLKSKKAIIAELETL- 476  

                   asLnPLeTdweaAsaelRkilddWkaigkvs.ReVd<-*
                   +s    e   e   ++l +++  W  ig v  Re d   
  gi|3454090   477 DS----EEASEGIIDRLNALAGRWNSIGFVPfREKD    508  

Integrin_alpha: domain 1 of 1, from 444 to 455: score 7.8, E = 0.086
                   *->FFKRkykpqeee<-*
                      FFKRk+ +q ++   
  gi|3454090   444    FFKRKKAEQGDM    455