Query sequence: gi|34540762|ref|NP_905241.1| Accession: [none] Description: hypothetical protein PG1020 [Porphyromonas gingivalis W83] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TonB_dep_Rec TonB dependent receptor 87.8 1.3e-24 1 Plug TonB-dependent Receptor Plug Domain 16.3 0.00029 1 PEGA PEGA domain 10.7 0.02 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PEGA 1/1 75 122 .. 31 73 .] 10.7 0.02 Plug 1/1 130 266 .. 4 104 .] 16.3 0.00029 TonB_dep_Rec 1/1 528 934 .. 1 208 [] 87.8 1.3e-24 Alignments of top-scoring domains: PEGA: domain 1 of 1, from 75 to 122: score 10.7, E = 0.02 *->lsdlpaGthtlrLekeGYedysttvtvtagetvkvslt.....Ltpt + ++ aG++++ ++ G++ ++tt +++a+ tv++ l++++ L+++ gi|3454076 75 IKRVTAGSYRVVVSCMGFASFETTLHIKADTTVHFRLKehsiaLKEV 121 p<-* + gi|3454076 122 Q 122 Plug: domain 1 of 1, from 130 to 266: score 16.3, E = 0.00029 *->dtpgsvsvvtaedlekrpasslgdaLrrvPGvsvvrggggggs.isi +t g+vsv ++ +le + +sl d++ +PG +v++ + g+ + + gi|3454076 130 KTDGNVSV-DRTALEHIQPTSLRDIFLLLPGNVVQSNSLTGFVgTTS 175 RGfgs.....srvlilvDGvpi............................ R +gs+++++ +++i++DG+p++++ + + ++ + ++ + + + gi|3454076 176 RQIGSddntsLGTNISIDGMPLsndamrtqlygitgvdrsdlyvadrtvt 225 ......gsvglssRIidpeliervevlkDGpssalyGagalGGv<-* ++ + +++l+ i+++ ie +e+ + G ss+ +G+ ++G++ gi|3454076 226 rrtgmnAGIDLRT--ISTDHIETIEIER-GISSVGEGNLSSGAI 266 TonB_dep_Rec: domain 1 of 1, from 528 to 934: score 87.8, E = 1.3e-24 *->sPrlgltsykptddlglslyasygrgfraPslgels........... r+++ ++ ++ lg++ +++++ f+ Ps ++ls + gi|3454076 528 EDRASV-EWGANR-LGIQAGLRATHLFNLPSSYALSrkmlieprika 572 .................................................. ++ + + + +++ + ++ + +++ + + + + ++ gi|3454076 573 nwqyraehlsinlragygmenklptldhlypdkiyrdfmvlnaymqnpel 622 ...........qgnpdLkpEtsdnyElGlkyrlgggrgnVaddlrfslsl + ++++ ++ np+++ ++ ++E+G+++++++ ++fsl+l gi|3454076 623 dhlitytyihnPENPAIRENRNVKKEIGIDMTYKR--------FDFSLTL 664 Fyndiknlivsvp.g.g................................. F+ + ++++++++++ + +++++ + ++ +++ gi|3454076 665 FHEESRRGFEYFDsYlPiafdrytkliaplppghkpqkedyiqehhkdff 714 .................................................. + ++ ++ ++ ++ + ++ ++ ++ + + ++ gi|3454076 715 viptvqnsakvvkrgiefrlrtpylkaintqvevngayyhtlyasgipim 764 .................................................. ++ + + + + +++ ++ + +++++ + ++ + ++ ++++ gi|3454076 765 frpivseyeqalypyvgyyegslhkhyqrfntnvwvnthfprykliftsf 814 ......................................g.ga.g.l.l.y + + + ++++ + + + + + ++ ++ + a++++ gi|3454076 815 fqiiwhdasyrgheesefpyaymdldgvvhptskaailEaAAtNdIlKyL 864 .gn.t.a.sn.gripgytlldlslsykfpkrgkkIPgMKmgRNwvaglrl ++++t+ ++ ++ p +++++++++f++r +rl gi|3454076 865 sRErTeLyYRaTYKPISLRINFKATKEFSDR----------------MRL 898 slgvnNLfdkkyyalspsgssggngstnykQgiaDTndyglpgrPWVkYL +++v+N+ d +++ ykQ a n++++ ++ gi|3454076 899 AFFVDNIIDINPK---------------YKQ--A--NNTTERDW------ 923 yyqpgRtfrlgltyrF<-* + ++g++++F gi|3454076 924 ---SIP--YFGIETTF 934