Query sequence: gi|34540750|ref|NP_905229.1| Accession: [none] Description: hypothetical protein PG1006 [Porphyromonas gingivalis W83] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TonB_dep_Rec TonB dependent receptor 80.8 1.3e-22 1 Plug TonB-dependent Receptor Plug Domain 60.8 2.5e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Plug 1/1 189 288 .. 1 104 [] 60.8 2.5e-17 TonB_dep_Rec 1/1 606 856 .. 1 208 [] 80.8 1.3e-22 Alignments of top-scoring domains: Plug: domain 1 of 1, from 189 to 288: score 60.8, E = 2.5e-17 *->dledtpgsvsvvtaedlekrpasslgdaLrrvPGvsvvrggggggs. +l ++ + + +++++d + +++l+++Lr+vP v+v +g+++ gi|3454075 189 PLVKMEIDRLSYNMKDDPAAKTNNLLEMLRNVPLVTV-----DGQGn 230 isiRGfgssrvlilvDGvpi......gsvglssRIidpeliervevlkDG i++ G s+ +i+++G+p + +++ +++s i++ i+rvev++ gi|3454075 231 IQVKGS--SNFKIHLNGRPStmvssnPKEVFRS--IPAHTIKRVEVIT-- 274 pssalyGagalGGv<-* ++++y+a +++++ gi|3454075 275 DPGVKYDAEGTSAI 288 TonB_dep_Rec: domain 1 of 1, from 606 to 856: score 80.8, E = 1.3e-22 *->sPrlgltsykptddlglslyasygrgfraPslgels........... P+l l+ y p++ +l++ y+ +++P++g+l+++ ++++ gi|3454075 606 VPQLTLG-YTPSP--MKQLKLAYNFRIQRPAIGQLNpyrlqtndyqv 649 .qgnpdLkpEtsdnyElGlkyrlgggrgnVaddlrfslslFyndiknliv +gnpdLk+E+ +++ l+++++ ++ +++++sl y+ +n i gi|3454075 650 qYGNPDLKSEKRHHVGLSYNQYGAK--------VMLTASLDYDFCNNAIQ 691 svp.g.g........................................... + + +++ + + + ++++ ++ +++ +++ ++ + + +++ ++ gi|3454075 692 NYTfSdPanpnlfhqtygnigrehsfslntyamytpavwvrimlngnidr 741 ........................g.ga.g.l.l.y.gn.t.a.sn.gri ++ + + + +++++ +++ + +++ + +g+ + +s+++++ gi|3454075 742 tfqksealgidvnswsgmvysglmFtLPkDwTvNlFgGYyHgGrSYqTKY 791 pgytlldlslsykfpkrgkkIPgMKmgRNwvaglrlslgvnNLfdkkyy. +g ++++ +++ ++ +lr+sl++nN+ k+ + gi|3454075 792 DGNVFNNIGIAKQLFDK---------------KLRVSLSANNIHAKYSTw 826 alspsgs.sggngstnykQgiaDTndyglpgrPWVkYLyyqpgRtfrlgl + + g++++ ++ +g R+++l+l gi|3454075 827 KSRTIGNgFT--------------IYSENAG----------IQRSVSLSL 852 tyrF<-* ty+F gi|3454075 853 TYSF 856