Query sequence: gi|34540740|ref|NP_905219.1|
Accession:      [none]
Description:    conserved hypothetical protein TIGR01777 [Porphyromonas gingivalis W83]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Epimerase     NAD dependent epimerase/dehydratase fam    54.8    5.4e-14   2
RmlD_sub_bind RmlD substrate binding domain              25.9    1.6e-07   1
NmrA          NmrA-like family                           15.0    0.00031   1
adh_short     short chain dehydrogenase                  12.7     0.0012   1
NAD_binding_4 Male sterility protein                      5.0       0.04   1
Saccharop_dh  Saccharopine dehydrogenase                  8.9      0.042   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
adh_short       1/1       4    27 ..     1    25 [.    12.7   0.0012
RmlD_sub_bind   1/1       5    47 ..     1    40 [.    25.9  1.6e-07
Epimerase       1/2       6   116 ..     1   144 [.    34.2  1.3e-08
Saccharop_dh    1/1       6    32 ..     1    29 [.     8.9    0.042
NmrA            1/1       6    35 ..     1    32 [.    15.0  0.00031
NAD_binding_4   1/1       8    25 ..     1    18 [.     5.0     0.04
Epimerase       2/2     192   227 ..   247   287 .]    20.6  4.8e-05

Alignments of top-scoring domains:
adh_short: domain 1 of 1, from 4 to 27: score 12.7, E = 0.0012
                   *->GTvLiTGGtGGLGlavARwLveehG<-*
                       +vLiTG+ G  ++a+ + Lv+  G   
  gi|3454074     4    DVVLITGANGMVARALSEELVRN-G    27   

RmlD_sub_bind: domain 1 of 1, from 5 to 47: score 25.9, E = 1.6e-07
                   *->riLvTGanGQLGreLrrqlaerglevlalpdra....kelelDi<-*
                       +L+TGanG+++r+L + l ++g+ +  l +r+++++ e e+D+   
  gi|3454074     5    VVLITGANGMVARALSEELVRNGYSIRIL-TRHkrneNEYEWDV    47   

Epimerase: domain 1 of 2, from 6 to 116: score 34.2, E = 1.3e-08
                   *->iLVTGgtGfiGsaLvrrLleeGyevivlDalgrrrrseslgtgrith
                      +L+TG++G++ +aL ++L ++Gy ++    + +r+++++++      
  gi|3454074     6    VLITGANGMVARALSEELVRNGYSIR----ILTRHKRNENEYE---- 44   

                   lyqidphesktprvefvygDltdpdalerllaeaqPDaViHlAAqsgGvd
                                      D+  ++   ++l+++   ++iHlA+   +  
  gi|3454074    45 ------------------WDVPKRRIEVEALQGV--RHIIHLAGAGVADK 74   

                   asf.edpadfiraNvlgtlnLLeaarkagvegaerkrfvfaSSasevY<-
                   ++++e+ +    + v  ++ LLe ++++++     +   f+S  s+v+  
  gi|3454074    75 PWTsERKEVIRSSRVDSARLLLETLKANDI-----RIATFISA-SAVG   116  

                   *
                    
  gi|3454074     -   -    

Saccharop_dh: domain 1 of 1, from 6 to 32: score 8.9, E = 0.042
                   *->VLilGA.GgvGrvvaekLaqrndggleitv<-*
                      VLi GA+G+v+r+  e+L+++   g+ i +   
  gi|3454074     6    VLITGAnGMVARALSEELVRN---GYSIRI    32   

NmrA: domain 1 of 1, from 6 to 35: score 15.0, E = 0.00031
                   *->IlVfGATGyQGgsVvraslklnaGhpvrALvR<-*
                      +l++GA G  ++++ + ++    G+ +r+L+R   
  gi|3454074     6    VLITGANGMVARALSEELVR--NGYSIRILTR    35   

NAD_binding_4: domain 1 of 1, from 8 to 25: score 5.0, E = 0.04
                   *->LTGATGFLGkvLlekLLr<-*
                      +TGA G++ ++L e+L+r   
  gi|3454074     8    ITGANGMVARALSEELVR    25   

Epimerase: domain 2 of 2, from 192 to 227: score 20.6, E = 4.8e-05
                   *->lGDYTpdGtqrRDflyVdDvarAillalekgeaggeiyNiG<-*
                      lG    +G+q  +++++ Dv+  il+al+++    +iyN+    
  gi|3454074   192    LG----SGKQYMPWIHISDVCGIILHALRNPT-VSGIYNVV    227