Query sequence: gi|34540300|ref|NP_904779.1|
Accession:      [none]
Description:    hypothetical protein PG0484 [Porphyromonas gingivalis W83]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
YbbR     YbbR-like protein                              111.9    1.7e-30   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
YbbR       1/2      57   141 ..     1    91 []    56.0    1e-14
YbbR       2/2     158   236 ..     1    91 []    55.9  1.1e-14

Alignments of top-scoring domains:
YbbR: domain 1 of 2, from 57 to 141: score 56.0, E = 1e-14
                   *->vpvevkykgvlnikpgyvvskippspvkVtvtGpesvlesivmnrks
                      ++++++y++ +   p++ vs++ p+  ++++++++ vl+++    k+
  gi|3454030    57    FSIPISYSELP---PDIGVSGRLPDRLDIMLKDQGIVLLTY----KL 96   

                   kvtapvDlsglkegvgsyvvpv.avdglpngleveiePsrvtvti<-*
                   k ++p+++s +k++ ++++++  ++++l++ l+ ++e+s+++  i   
  gi|3454030    97 KGFSPINISPSKAQLHKKKSMRlNKWDLVELLQKQLETSTTVAAI    141  

YbbR: domain 2 of 2, from 158 to 236: score 55.9, E = 1.1e-14
                   *->vpvevkykgvlnikpgyvvskippspvkVtvtGpesvlesivmnrks
                      vpv+++ + v+  k+g+++ +  +sp++Vt++G+++ l si    +s
  gi|3454030   158    VPVVINGQTVP--KEGFYAFDPIFSPSEVTIYGSAEALASI----GS 198  

                   kvtapvDlsglkegvgsyvvpvavdglpngle.veiePsrvtvti<-*
                    +t++++++gl+ +++ + ++        ++ +++i+P+++++++   
  gi|3454030   199 VNTEEFSIDGLESDFSGDIAIA-------PIDdIVIDPTNIRMQV    236