Query sequence: gi|34540168|ref|NP_904647.1|
Accession:      [none]
Description:    hypothetical protein PG0333 [Porphyromonas gingivalis W83]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
DUF6           Integral membrane protein DUF6            89.5    9.2e-24   2
DUF250         Domain of unknown function, DUF250         9.7      0.027   2
Multi_Drug_Res Small Multidrug Resistance protein         9.5      0.064   2

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
DUF6             1/2      17   141 ..     1   128 []    30.3  3.2e-07
Multi_Drug_Res   1/2     115   134 ..    81    98 .]     2.6      4.8
DUF250           1/2     115   138 ..   135   161 ..     1.3      6.1
DUF250           2/2     153   173 ..     1    21 [.     8.4    0.063
DUF6             2/2     162   289 ..     1   128 []    59.2  9.1e-15
Multi_Drug_Res   2/2     258   280 ..    76    98 .]     6.9     0.33

Alignments of top-scoring domains:
DUF6: domain 1 of 2, from 17 to 141: score 30.3, E = 3.2e-07
                   *->fiWalytvfskkller.ispltltawrfliagilllilllfllkgpp
                       +++l  +f+  +++++ s   ++++rf++a+   +++ ++++  + 
  gi|3454016    17    ATFGLIPLFTLPVSAKgASFELILFYRFFFAA---IAIGILHRLSGG 60   

                   llallslk.ilallylgilgtalgyllyfyalkyvsaskasvltslsPvf
                    +++ s+ +i+ l++lg+l+ a + l++f +  y  +++a+ + +l+P+f
  gi|3454016    61 -SFKVSRAdIGPLVLLGFLY-AGTALFLFHGYGYMASGVATTIHFLYPLF 108  

                   tlilsvllLgEkltlkqllGivlillGvllisl<-*
                   ++ l  l++gE+l++  l +i+++l+Gv l+     
  gi|3454016   109 VTALMLLFFGERLSPVPLTAIFIALIGVGLLMG    141  

Multi_Drug_Res: domain 1 of 2, from 115 to 134: score 2.6, E = 4.8
                   *->llFgEslslkki..iglaLI<-*
                      l+FgE+ls   ++ i++aLI   
  gi|3454016   115    LFFGERLSPVPLtaIFIALI    134  

DUF250: domain 1 of 2, from 115 to 138: score 1.3, E = 6.1
                   *->iiFgFmDdpvtplnilGlaiAlaGvvl<-*
                      ++Fg   ++++p+   ++ iAl+Gv l   
  gi|3454016   115    LFFG---ERLSPVPLTAIFIALIGVGL    138  

DUF250: domain 2 of 2, from 153 to 173: score 8.4, E = 0.063
                   *->GfilalaasllfaLrlilsqk<-*
                      Gf+ + +++l++aL+ +++++   
  gi|3454016   153    GFVIVAISALCYALYIVFVNR    173  

DUF6: domain 2 of 2, from 162 to 289: score 59.2, E = 9.1e-15
                   *->fiWalytvfskkller.ispltltawrfliagilllilllfllkgpp
                      +++aly vf  +   r ++   lt++ f+ a+ + li  l+  ++  
  gi|3454016   162    LCYALYIVFVNRSRIRiMPGRRLTFYVFVAAAGFCLINVLVRQGEV- 207  

                   llallslk.ilallylgilgtalgyllyfyalkyvsaskasvltslsPvf
                     +l++  +++ +l+l++++t++ +l++  a+++++++  s+l +++P+ 
  gi|3454016   208 -APLPDAAsWGNILLLALVPTVISNLALVVAVRNIGSTLTSALGAMEPLT 256  

                   tlilsvllLgEkltlkqllGivlillGvllisl<-*
                   +++ +v+++ E l+ + ++G ++il++v li++   
  gi|3454016   257 SVLVGVWVFDEVLGASAIVGMGCILIAVGLIVF    289  

Multi_Drug_Res: domain 2 of 2, from 258 to 280: score 6.9, E = 0.33
                   *->tlvgillFgEslslkkiiglaLI<-*
                      +lvg+  F+E l +  i+g++ I   
  gi|3454016   258    VLVGVWVFDEVLGASAIVGMGCI    280